Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0007759

Physical Location & Seq

Genomic Coordinates Reverse (-)

19790437 .. 19794210

Gene Structure 3774 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G141900.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1263 bp

ATGCTACCCACTGGAGCAAGGGATACTCAACTCAGCAATAACCAAAAGGTTCATCCACAACCCATGGAAGAGGCCATGAATCAGAATCCAGAAGCTGTGGAAGCCTTGATATCTAAGGTTTTTACGAACATCTCTTCCCTGAAGTCAGCTTACATCCAGCTCCAAGCTGCTCATACTCCCTACGACCCTGAAAAAATTCAAGCTGCAGATAAACTTGTAATTTCTGAGCTAAAAAACCTTTCTGAACTTAAGCACTTCTATAGGGAGAACAATCCCAGCCCAGTTTGTGTTTCTCCACAGGACTCCCGCCTAGCTGCAGAGATTCAAGAACAACAAATTCTGCTGAAAACCTATGGGGTTATGGTTAAGAAATTCCAATCTGAAATCCAGAATAAAGATTCTGAAATCCTTCAGCTTCAGCAGCATATTGAGGAGGCAAAACAGAAGCAAGCAAAGTTGGAAAAGAATCTAAAGCTCAGGGGCATGTCTACTAAAGAATCGGAAGGTTCCGCTGATGAAAATGGTTTTCCGCCTGTGGATCTAACTTCCGATCTCTTCACTTCAGTTGTTGAAGCTGCATACAAAGCTATTCATGATTTTTCTAAGCCGCTGATTAACATGATGAAGGCAGCTGGGTGGGACCTTGATGCAGCAGCCAATTCTATTGAACCCAGTGTTGTTTATGCAAAGAGACCTCACAAGAAGTATGCCTTTGAGTCCCATATTTGCCAAAGAATGTTCAGTGGCTTTCAGCAGGAAAGCTTCTCCCTTAACTTAGACAATCTTACAGTCACTAAGGAGAGCTTCTTCCACCAATTTCTTACACTACGGGACATGGATCCATTGGACATGCTTGGCCAAAATCCAGATTCTGTTTTTGGGAGATTTTGTAGGAGCAAGTACCTGGTAGTGGTTCACCCAAAAATGGAGACTTCGTTTTTCGGGAATTTAGATCAACGAAATTATGTAATGGGTGGGGGGCATCCAAGGACTCCTTTTTACCAGGCTTTTCTAAAACTGGCCAAGTCAATATGGCTTTTGCATAGGTTGGCTTATTCTTTTGATCCTCGTGTTGAGGTCTTTCAGGTCAAGAGGGGGAGTGAGTTCTCGGAGGTTTATATGGACAGTGTGGTGAAGAATTTAATAATGGATGAAAGTGATCAAAAGCCTAAGGTTGGTCTCATGGTTATGCCTGGTTTCTGGATTGGAGGCAGTGTGATTCAAAGTCGGGTTTATCTCTCTGGCATGAACGTTGCTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF641

Protein Analysis

421

Amino Acids

47.65

Weight (kDa)

6.44

Isoelectric Point (pI)

48.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007759)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45260 AT4G33320 AT4G34080 AT4G36100
fragaria_vesca	FvH4_7g11400
malus_domestica	MD02G1206300.v1.1 MD07G1118700.v1.1
prunus_persica	Prupe.2G141900_v2.0.a1 Prupe.2G141900_v2.0.a1 Prupe.2G141900_v2.0.a1 Prupe.2G141900_v2.0.a1 Prupe.2G141900_v2.0.a1
pyrus_communis	pycom02g16930 pycom07g10600
rosa_chinensis	RchiOBHm_Chr1g0349691
rosa_laevigata	RLG00000028535
rosa_roxburghii	Rroxscaffold_4G00305380
rosa_rugosa	Rorug01G0205000 Rorug01G0205100
rosa_samantha	Rh1AG222600 Rh1BG188700 Rh1CG207300 Rh1DG217800
rosa_wichuraiana	Rw1G018980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	488
AciI	CCGC	4 cut(s)	307, 510, 530, 608
AclI	AACGTT	1 cut(s)	1251
AclWI	GGATC	4 cut(s)	546, 833, 846, 1058
AcoI	YGGCCR	2 cut(s)	856, 1020
AcsI	RAATTY	5 cut(s)	195, 336, 371, 946, 1138
AcuI	CTGAAG	4 cut(s)	161, 395, 401, 546
AfaI	GTAC	1 cut(s)	902
AfiI	CCNNNNNNNGG	3 cut(s)	910, 925, 1175
AflII	CTTAAG	1 cut(s)	248
AgsI	TTSAA	5 cut(s)	200, 326, 572, 668, 1223
AjnI	CCWGG	3 cut(s)	903, 1002, 1192
AloI	GAACNNNNNNTCC	2 cut(s)	119, 151
Alw26I	GTCTC	3 cut(s)	685, 923, 1184
AlwI	GGATC	4 cut(s)	546, 833, 846, 1058
AlwNI	CAGNNNCTG	2 cut(s)	95, 872
AoxI	GGCC	3 cut(s)	72, 856, 1020
ApeKI	GCWGC	8 cut(s)	167, 203, 314, 421, 575, 629, 650, 653
ApoI	RAATTY	5 cut(s)	195, 336, 371, 946, 1138
Asp700I	GAANNNNTTC	2 cut(s)	195, 408
AspS9I	GGNCC	1 cut(s)	640
AsuHPI	GGTGA	2 cut(s)	908, 1144
AvaII	GGWCC	1 cut(s)	640
AxyI	CCTNAGG	1 cut(s)	1170
BalI	TGGCCA	2 cut(s)	858, 1022
BamHI	GGATCC	1 cut(s)	838
BarI	GAAGNNNNNNTAC	2 cut(s)	134, 166
BauI	CACGAG	1 cut(s)	1068
BbvI	GCAGC	8 cut(s)	154, 190, 301, 433, 562, 641, 662, 665
BciT130I	CCWGG	3 cut(s)	905, 1004, 1194
BciVI	GTATCC	1 cut(s)	16
BclI	TGATCA	1 cut(s)	1159
BcoDI	GTCTC	3 cut(s)	685, 923, 1184
BfaI	CTAG	1 cut(s)	311
BfmI	CTRYAG	3 cut(s)	204, 259, 315
BfrI	CTTAAG	1 cut(s)	248
BfuI	GTATCC	1 cut(s)	16
BisI	GCNGC	9 cut(s)	168, 204, 315, 422, 576, 608, 630, 651, 654
BlsI	GCNGC	9 cut(s)	169, 205, 316, 423, 577, 609, 631, 652, 655
Bme1390I	CCNGG	3 cut(s)	905, 1004, 1194
Bme18I	GGWCC	1 cut(s)	640
BmgT120I	GGNCC	1 cut(s)	640
BmiI	GGNNCC	3 cut(s)	508, 641, 840
BmrFI	CCNGG	3 cut(s)	905, 1004, 1194
BmrI	ACTGGG	2 cut(s)	275, 666
BmsI	GCATC	2 cut(s)	637, 991
BmuI	ACTGGG	2 cut(s)	275, 666
BpmI	CTGGAG	1 cut(s)	33
Bpu10I	CCTNAGC	1 cut(s)	476
BsaI	GGTCTC	2 cut(s)	685, 1184
BsaJI	CCNNGG	2 cut(s)	63, 986
BsaXI	ACNNNNNCTCC	6 cut(s)	874, 904, 920, 950, 1200, 1230
Bsc4I	CCNNNNNNNGG	3 cut(s)	910, 925, 1175
Bse1I	ACTGG	4 cut(s)	16, 281, 672, 1023
Bse21I	CCTNAGG	1 cut(s)	1170
BseBI	CCWGG	3 cut(s)	905, 1004, 1194
BseDI	CCNNGG	2 cut(s)	63, 986
BseGI	GGATG	4 cut(s)	52, 153, 982, 1156
BseLI	CCNNNNNNNGG	3 cut(s)	910, 925, 1175
BseMII	CTCAG	3 cut(s)	46, 216, 490
BseNI	ACTGG	4 cut(s)	16, 281, 672, 1023
BseRI	GAGGAG	1 cut(s)	446
BseXI	GCAGC	8 cut(s)	154, 190, 301, 433, 562, 641, 662, 665
BseYI	CCCAGC	2 cut(s)	275, 632
BshFI	GGCC	3 cut(s)	74, 858, 1022
BslFI	GGGAC	3 cut(s)	653, 703, 845
BslI	CCNNNNNNNGG	3 cut(s)	910, 925, 1175
BsmAI	GTCTC	3 cut(s)	685, 923, 1184
BsmFI	GGGAC	3 cut(s)	653, 703, 845
BsnI	GGCC	3 cut(s)	74, 858, 1022
Bso31I	GGTCTC	2 cut(s)	685, 1184
Bsp143I	GATC	6 cut(s)	538, 550, 838, 952, 1063, 1159
Bsp19I	CCATGG	1 cut(s)	63
BspACI	CCGC	4 cut(s)	307, 510, 530, 608
BspANI	GGCC	3 cut(s)	74, 858, 1022
BspCNI	CTCAG	3 cut(s)	45, 217, 489
BspHI	TCATGA	1 cut(s)	592
BspLI	GGNNCC	3 cut(s)	508, 641, 840
BspMAI	CTGCAG	2 cut(s)	208, 319
BspPI	GGATC	4 cut(s)	546, 833, 846, 1058
BspTI	CTTAAG	1 cut(s)	248
BspTNI	GGTCTC	2 cut(s)	685, 1184
BsrI	ACTGG	4 cut(s)	16, 281, 672, 1023
BssECI	CCNNGG	2 cut(s)	63, 986
BssMI	GATC	6 cut(s)	538, 550, 838, 952, 1063, 1159
BssSI	CACGAG	1 cut(s)	1068
BssT1I	CCWWGG	2 cut(s)	63, 986
Bst2BI	CACGAG	1 cut(s)	1068
Bst2UI	CCWGG	3 cut(s)	905, 1004, 1194
Bst4CI	ACNGT	2 cut(s)	790, 1127
Bst6I	CTCTTC	3 cut(s)	63, 139, 560
BstAFI	CTTAAG	1 cut(s)	248
BstC8I	GCNNGC	1 cut(s)	450
BstDEI	CTNAG	8 cut(s)	32, 114, 225, 476, 603, 775, 795, 1170
BstDSI	CCRYGG	1 cut(s)	63
BstF5I	GGATG	4 cut(s)	52, 153, 982, 1156
BstKTI	GATC	6 cut(s)	541, 553, 841, 955, 1066, 1162
BstMAI	GTCTC	3 cut(s)	685, 923, 1184
BstMBI	GATC	6 cut(s)	538, 550, 838, 952, 1063, 1159
BstMWI	GCNNNNNNNGC	3 cut(s)	101, 421, 584
BstNI	CCWGG	3 cut(s)	905, 1004, 1194
BstNSI	RCATGY	2 cut(s)	487, 853
BstSCI	CCNGG	3 cut(s)	903, 1002, 1192
BstSFI	CTRYAG	3 cut(s)	204, 259, 315
BstV1I	GCAGC	8 cut(s)	154, 190, 301, 433, 562, 641, 662, 665
BstX2I	RGATCY	2 cut(s)	538, 838
BstYI	RGATCY	2 cut(s)	538, 838
Bsu36I	CCTNAGG	1 cut(s)	1170
BsuI	GTATCC	1 cut(s)	16
BsuRI	GGCC	3 cut(s)	74, 858, 1022
BtgI	CCRYGG	1 cut(s)	63
BtsCI	GGATG	4 cut(s)	52, 153, 982, 1156
BtsI	GCAGTG	1 cut(s)	1219
BtsIMutI	CAGTG	5 cut(s)	9, 679, 748, 1132, 1219
Cac8I	GCNNGC	1 cut(s)	450
CaiI	CAGNNNCTG	2 cut(s)	95, 872
CciI	TCATGA	1 cut(s)	592
Cfr13I	GGNCC	1 cut(s)	640
CsiI	ACCWGGT	1 cut(s)	903
Csp6I	GTAC	1 cut(s)	901
CviAII	CATG	9 cut(s)	64, 76, 484, 593, 619, 835, 850, 1183, 1246
CviQI	GTAC	1 cut(s)	901
DdeI	CTNAG	8 cut(s)	32, 114, 225, 476, 603, 775, 795, 1170
DpnI	GATC	6 cut(s)	540, 552, 840, 954, 1065, 1161
DpnII	GATC	6 cut(s)	538, 550, 838, 952, 1063, 1159
EaeI	YGGCCR	2 cut(s)	856, 1020
Eam1104I	CTCTTC	3 cut(s)	63, 139, 560
EarI	CTCTTC	3 cut(s)	63, 139, 560
EciI	GGCGGA	1 cut(s)	519
Eco130I	CCWWGG	2 cut(s)	63, 986
Eco31I	GGTCTC	2 cut(s)	685, 1184
Eco32I	GATATC	1 cut(s)	111
Eco47I	GGWCC	1 cut(s)	640
Eco57I	CTGAAG	4 cut(s)	161, 395, 401, 546
Eco81I	CCTNAGG	1 cut(s)	1170
EcoO109I	RGGNCCY	1 cut(s)	640
EcoRII	CCWGG	3 cut(s)	903, 1002, 1192
EcoRV	GATATC	1 cut(s)	111
EcoT14I	CCWWGG	2 cut(s)	63, 986
ErhI	CCWWGG	2 cut(s)	63, 986
FaeI	CATG	9 cut(s)	67, 79, 487, 596, 622, 838, 853, 1186, 1249
FalI	AAGNNNNNCTT	6 cut(s)	695, 727, 788, 820, 979, 1011
FaqI	GGGAC	3 cut(s)	653, 703, 845
FatI	CATG	9 cut(s)	63, 75, 483, 592, 618, 834, 849, 1182, 1245
FauI	CCCGC	1 cut(s)	314
FbaI	TGATCA	1 cut(s)	1159
FblI	GTMKAC	1 cut(s)	488
Fnu4HI	GCNGC	9 cut(s)	168, 204, 315, 422, 576, 608, 630, 651, 654
FokI	GGATG	4 cut(s)	39, 140, 969, 1163
Fsp4HI	GCNGC	9 cut(s)	168, 204, 315, 422, 576, 608, 630, 651, 654
FspBI	CTAG	1 cut(s)	311
GluI	GCNGC	9 cut(s)	168, 204, 315, 422, 576, 608, 630, 651, 654
GsaI	CCCAGC	2 cut(s)	279, 636
GsuI	CTGGAG	1 cut(s)	33
HaeIII	GGCC	3 cut(s)	74, 858, 1022
Hin1II	CATG	9 cut(s)	67, 79, 487, 596, 622, 838, 853, 1186, 1249
HindIII	AAGCTT	1 cut(s)	760
HphI	GGTGA	2 cut(s)	908, 1144
Hpy166II	GTNNAC	2 cut(s)	489, 916
Hpy188I	TCNGA	8 cut(s)	84, 226, 244, 382, 403, 502, 550, 1111
Hpy188III	TCNNGA	8 cut(s)	89, 326, 388, 593, 866, 943, 1090, 1201
Hpy8I	GTNNAC	2 cut(s)	489, 916
HpyAV	CCTTC	3 cut(s)	419, 497, 619
HpyCH4III	ACNGT	2 cut(s)	790, 1127
HpyCH4IV	ACGT	1 cut(s)	1251
HpyCH4V	TGCA	6 cut(s)	206, 317, 578, 650, 686, 1042
HpyF10VI	GCNNNNNNNGC	3 cut(s)	101, 421, 584
HpyF3I	CTNAG	8 cut(s)	32, 114, 225, 476, 603, 775, 795, 1170
HpySE526I	ACGT	1 cut(s)	1251
Hsp92II	CATG	9 cut(s)	67, 79, 487, 596, 622, 838, 853, 1186, 1249
Ksp22I	TGATCA	1 cut(s)	1159
Kzo9I	GATC	6 cut(s)	538, 550, 838, 952, 1063, 1159
LmnI	GCTCC	3 cut(s)	14, 165, 894
Lsp1109I	GCAGC	8 cut(s)	154, 190, 301, 433, 562, 641, 662, 665
LweI	GCATC	2 cut(s)	637, 991
MabI	ACCWGGT	1 cut(s)	903
MaeI	CTAG	1 cut(s)	311
MaeII	ACGT	1 cut(s)	1251
MaeIII	GTNAC	1 cut(s)	790
MalI	GATC	6 cut(s)	540, 552, 840, 954, 1065, 1161
MboI	GATC	6 cut(s)	538, 550, 838, 952, 1063, 1159
MboII	GAAGA	5 cut(s)	80, 126, 547, 799, 1147
MflI	RGATCY	2 cut(s)	538, 838
MlsI	TGGCCA	2 cut(s)	858, 1022
MluCI	AATT	9 cut(s)	195, 219, 336, 371, 658, 815, 946, 961, 1138
MluNI	TGGCCA	2 cut(s)	858, 1022
MlyI	GAGTC	3 cut(s)	296, 725, 985
MmeI	TCCRAC	1 cut(s)	438
MnlI	CCTC	9 cut(s)	64, 424, 427, 705, 1069, 1077, 1086, 1105, 1202
Mox20I	TGGCCA	2 cut(s)	858, 1022
MroXI	GAANNNNTTC	2 cut(s)	195, 408
MscI	TGGCCA	2 cut(s)	858, 1022
MseI	TTAA	5 cut(s)	249, 366, 615, 771, 1142
MslI	CAYNNNNRTG	1 cut(s)	1187
Msp20I	TGGCCA	2 cut(s)	858, 1022
MspA1I	CMGCKG	3 cut(s)	512, 610, 632
MspCI	CTTAAG	1 cut(s)	248
MspR9I	CCNGG	3 cut(s)	905, 1004, 1194
MvaI	CCWGG	3 cut(s)	905, 1004, 1194
MwoI	GCNNNNNNNGC	3 cut(s)	101, 421, 584
NcoI	CCATGG	1 cut(s)	63
NdeII	GATC	6 cut(s)	538, 550, 838, 952, 1063, 1159
NlaIII	CATG	9 cut(s)	67, 79, 487, 596, 622, 838, 853, 1186, 1249
NlaIV	GGNNCC	3 cut(s)	508, 641, 840
NmuCI	GTSAC	1 cut(s)	790
NspI	RCATGY	2 cut(s)	487, 853
PagI	TCATGA	1 cut(s)	592
PdmI	GAANNNNTTC	2 cut(s)	195, 408
PfeI	GAWTC	8 cut(s)	79, 85, 322, 398, 466, 497, 869, 1219
PkrI	GCNGC	9 cut(s)	169, 205, 316, 423, 577, 609, 631, 652, 655
PleI	GAGTC	3 cut(s)	296, 724, 985
PpsI	GAGTC	3 cut(s)	296, 724, 985
PpuMI	RGGWCCY	1 cut(s)	640
Psp1406I	AACGTT	1 cut(s)	1251
Psp5II	RGGWCCY	1 cut(s)	640
Psp6I	CCWGG	3 cut(s)	903, 1002, 1192
PspFI	CCCAGC	2 cut(s)	275, 632
PspGI	CCWGG	3 cut(s)	903, 1002, 1192
PspN4I	GGNNCC	3 cut(s)	508, 641, 840
PspPI	GGNCC	1 cut(s)	640
PspPPI	RGGWCCY	1 cut(s)	640
PstI	CTGCAG	2 cut(s)	208, 319
PstNI	CAGNNNCTG	2 cut(s)	95, 872
PsuI	RGATCY	2 cut(s)	538, 838
PvuII	CAGCTG	1 cut(s)	632
RsaI	GTAC	1 cut(s)	902
RsaNI	GTAC	1 cut(s)	901
RseI	CAYNNNNRTG	1 cut(s)	1187
SaqAI	TTAA	5 cut(s)	249, 366, 615, 771, 1142
SatI	GCNGC	9 cut(s)	168, 204, 315, 422, 576, 608, 630, 651, 654
Sau3AI	GATC	6 cut(s)	538, 550, 838, 952, 1063, 1159
Sau96I	GGNCC	1 cut(s)	640
SchI	GAGTC	3 cut(s)	296, 725, 985
ScrFI	CCNGG	3 cut(s)	905, 1004, 1194
SexAI	ACCWGGT	1 cut(s)	903
SfaNI	GCATC	2 cut(s)	637, 991
SfcI	CTRYAG	3 cut(s)	204, 259, 315
SinI	GGWCC	1 cut(s)	640
SmiMI	CAYNNNNRTG	1 cut(s)	1187
SmlI	CTYRAG	1 cut(s)	248
SmoI	CTYRAG	1 cut(s)	248
Sse9I	AATT	9 cut(s)	195, 219, 336, 371, 658, 815, 946, 961, 1138
SsiI	CCGC	4 cut(s)	307, 510, 530, 608
SspMI	CTAG	1 cut(s)	311
StyD4I	CCNGG	3 cut(s)	903, 1002, 1192
StyI	CCWWGG	2 cut(s)	63, 986
TaaI	ACNGT	2 cut(s)	790, 1127
TaiI	ACGT	1 cut(s)	1254
TasI	AATT	9 cut(s)	195, 219, 336, 371, 658, 815, 946, 961, 1138
TauI	GCSGC	1 cut(s)	610
TfiI	GAWTC	8 cut(s)	79, 85, 322, 398, 466, 497, 869, 1219
Tru1I	TTAA	5 cut(s)	249, 366, 615, 771, 1142
Tru9I	TTAA	5 cut(s)	249, 366, 615, 771, 1142
TscAI	CASTG	5 cut(s)	16, 679, 748, 1132, 1219
TseFI	GTSAC	1 cut(s)	790
TseI	GCWGC	8 cut(s)	167, 203, 314, 421, 575, 629, 650, 653
Tsp45I	GTSAC	1 cut(s)	790
TspDTI	ATGAA	7 cut(s)	41, 92, 531, 581, 638, 1167, 1262
TspRI	CASTG	5 cut(s)	16, 679, 748, 1132, 1219
Vha464I	CTTAAG	1 cut(s)	248
VpaK11BI	GGWCC	1 cut(s)	640
XapI	RAATTY	5 cut(s)	195, 336, 371, 946, 1138
XceI	RCATGY	2 cut(s)	487, 853
XmiI	GTMKAC	1 cut(s)	488
XmnI	GAANNNNTTC	2 cut(s)	195, 408
XspI	CTAG	1 cut(s)	311

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.