Prupe.2G143300_v2.0.a1

Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
20065478 .. 20071922
6445 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G143300.1

Sequence Viewer

Length: 1413 bp
ATGGCACTCTCTTTCAGATTTTGGCGCCTAAATCTCCTCCCAAAACCTTCACTTTCACACCTACAAACCACTCTCAAAGCTCTGAAACCTCTCAAACAAAAACTAAGTCCCATATGTTCACTTCCCATGTCTTCTTCTTCTTTGAATCCCTTGAACTCCCACCTCTCCGTATCAAAAAATCCCACTTTTTCAGAACCTCAAAATCCAACTGCATGTCCCCAAGATGATCTCGTTGTTCTGGGCATTGAAACCAGCTGTGACGACACCGCTGCCGCTGTCGTAAGAGGCAATGGTGAAATCCTCAGCCAAGTTGTGTCTTCTCAGGCAGATTTGCTTGCTCAATATGGAGGTGTTGCTCCAAAAATGGCAGAGGAAGCGCACTTGCAAGTGATTGATCAGGTTGTGCAAGAAGCGCTTGACAAAGCTAAATTAACTGAGAGGAATTTGTCTGCAATAGCGGTTACTATTGGTCCTGGTTTAGGCCTCTGTCTTCGTGTTGGTGTGCGGAAAGCTCGTAAGATTGCTGGTAGCTTTAACTTACCAATCATTGGTGTACATCACATGGAGGCTCATGCTCTTGTAGCCAGGTTAAACGAAAGAGAGTTGCAATTCCCTTTCATGGCTCTGCTTATTTCAGGAGGACATAATCTACTCATTCTTGCTCGTGATCTTGGCCAATACATACAACTTGGTACCACAATAGACGATGCGATTGGCGAGGCATATGACAAGACTGCAAAATGGCTTGGTCTTGACTTGAGGAGAAGTGGTGGGCCAGCTATAGAAGAGCTTGCTCGAGAGGGTGATGCAAAATCAATCAAATTCTCAACTCCAATGAAACAACATAAAGATTGCAACTTCTCGTATGCTGGTCTGAAGACTCAAGTGAGGCTGGCAATTGAATCTAAGAATATTAATGCTGCAATTCCTATTTCTTCAGCGAGCAGCGAAGATAGAAGGACTCGAGCTGATATTGCTGCCTCTTTTCAGCGAGTCGCAGTATTACATCTGGAGGAAAGGTGTGAGCGAGCAATTGAATGGGCTCTGAACATTGAACCTTCTGTAAAATATTTGGTTGTCTCCGGAGGTGTTGCATCAAATCAGTATGTTCGGGCTCGGCTTGATCAGGTTGTCCAGAGAAACAGCTTACGACTTGTGTGCCCACCTCCCAGCCTTTGTACTGACAATGGTGTCATGGTGGCTTGGACTGGCATTGAGAACTTTCGTATGGGAAGATTTGATCCACCACCACCTGCGGATGAACCTGAAGATATTGTGTATGATCTGCGGCCAAGGTGGCCATTGGGAGAGGAATACGCAGATGGAAGAAGTGAAGCTCGCTCAATGAAAACAGCCCGCATTCATCCCTCTCTGACATCTATGATCCAAGCATCTTCACAACAGCAACCATAG

Protein Analysis

471

Amino Acids

51.43

Weight (kDa)

8.07

Isoelectric Point (pI)

53.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1261
AasI GACNNNNNNGTC 1 cut(s) 1190
Acc36I ACCTGC 1 cut(s) 1261
Acc65I GGTACC 1 cut(s) 692
AccB1I GGYRCC 2 cut(s) 24, 692
AccB7I CCANNNNNTGG 1 cut(s) 548
AccIII TCCGGA 1 cut(s) 1082
AciI CCGC 7 cut(s) 267, 273, 458, 505, 1256, 1288, 1357
AclWI GGATC 2 cut(s) 1235, 1378
AcoI YGGCCR 3 cut(s) 673, 1289, 1298
AcsI RAATTY 2 cut(s) 442, 821
AcuI CTGAAG 3 cut(s) 896, 921, 1287
AcyI GRCGYC 1 cut(s) 25
AfaI GTAC 3 cut(s) 555, 694, 1180
AfeI AGCGCT 1 cut(s) 414
AfiI CCNNNNNNNGG 3 cut(s) 479, 548, 619
AgsI TTSAA 6 cut(s) 145, 154, 248, 902, 1037, 1055
AjnI CCWGG 2 cut(s) 472, 584
Alw26I GTCTC 1 cut(s) 1084
AlwI GGATC 2 cut(s) 1235, 1378
Ama87I CYCGRG 2 cut(s) 795, 963
Aor13HI TCCGGA 1 cut(s) 1082
Aor51HI AGCGCT 1 cut(s) 414
AoxI GGCC 5 cut(s) 481, 673, 773, 1289, 1298
ApeKI GCWGC 4 cut(s) 269, 920, 945, 977
ApoI RAATTY 2 cut(s) 442, 821
ArsI GACNNNNNNTTYG 2 cut(s) 91, 123
AseI ATTAAT 1 cut(s) 915
Asp718I GGTACC 1 cut(s) 692
AspLEI GCGC 3 cut(s) 27, 379, 415
AspS9I GGNCC 2 cut(s) 470, 773
AsuHPI GGTGA 2 cut(s) 305, 815
AvaI CYCGRG 2 cut(s) 795, 963
AvaII GGWCC 1 cut(s) 470
BaeGI GKGCMC 1 cut(s) 1163
BalI TGGCCA 2 cut(s) 675, 1300
BanI GGYRCC 2 cut(s) 24, 692
BanII GRGCYC 2 cut(s) 1045, 1117
BauI CACGAG 1 cut(s) 663
BbsI GAAGAC 4 cut(s) 123, 309, 482, 884
BbvCI CCTCAGC 1 cut(s) 302
BbvI GCAGC 4 cut(s) 256, 907, 957, 964
BccI CCATC 1 cut(s) 1316
BcgI CGANNNNNNTGC 4 cut(s) 251, 285, 1140, 1174
BciT130I CCWGG 2 cut(s) 474, 586
BclI TGATCA 2 cut(s) 394, 1123
BcoDI GTCTC 1 cut(s) 1084
BfmI CTRYAG 1 cut(s) 780
BfoI RGCGCY 2 cut(s) 28, 416
BfuAI ACCTGC 1 cut(s) 1261
BglI GCCNNNNNGGC 1 cut(s) 1297
BisI GCNGC 6 cut(s) 270, 273, 921, 946, 978, 1289
BlsI GCNGC 6 cut(s) 271, 274, 922, 947, 979, 1290
Bme1390I CCNGG 2 cut(s) 474, 586
Bme18I GGWCC 1 cut(s) 470
BmeT110I CYCGRG 2 cut(s) 795, 963
BmgT120I GGNCC 2 cut(s) 470, 773
BmiI GGNNCC 2 cut(s) 26, 694
BmrFI CCNGG 2 cut(s) 474, 586
BmsI GCATC 4 cut(s) 697, 796, 1103, 1400
BpiI GAAGAC 4 cut(s) 123, 309, 482, 884
BpmI CTGGAG 1 cut(s) 1031
Bpu10I CCTNAGC 1 cut(s) 302
BpuEI CTTGAG 2 cut(s) 778, 867
BsaHI GRCGYC 1 cut(s) 25
BsaJI CCNNGG 1 cut(s) 1292
BsaWI WCCGGW 1 cut(s) 1082
BsaXI ACNNNNNCTCC 4 cut(s) 754, 784, 1004, 1034
Bsc4I CCNNNNNNNGG 3 cut(s) 479, 548, 619
Bse1I ACTGG 1 cut(s) 1213
Bse3DI GCAATG 1 cut(s) 295
BseAI TCCGGA 1 cut(s) 1082
BseBI CCWGG 2 cut(s) 474, 586
BseDI CCNNGG 1 cut(s) 1292
BseGI GGATG 2 cut(s) 1264, 1363
BseLI CCNNNNNNNGG 3 cut(s) 479, 548, 619
BseMI GCAATG 1 cut(s) 295
BseMII CTCAG 3 cut(s) 316, 335, 426
BseNI ACTGG 1 cut(s) 1213
BseRI GAGGAG 2 cut(s) 26, 775
BseSI GKGCMC 1 cut(s) 1163
BseXI GCAGC 4 cut(s) 256, 907, 957, 964
BseYI CCCAGC 1 cut(s) 1169
BshFI GGCC 5 cut(s) 483, 675, 775, 1291, 1300
BshNI GGYRCC 2 cut(s) 24, 692
BsiHKCI CYCGRG 2 cut(s) 795, 963
BsiSI CCGG 1 cut(s) 1083
BslFI GGGAC 2 cut(s) 93, 201
BslI CCNNNNNNNGG 3 cut(s) 479, 548, 619
BsmAI GTCTC 1 cut(s) 1084
BsmFI GGGAC 2 cut(s) 93, 201
BsmI GAATGC 1 cut(s) 1359
BsnI GGCC 5 cut(s) 483, 675, 775, 1291, 1300
BsoBI CYCGRG 2 cut(s) 795, 963
Bsp1286I GDGCHC 3 cut(s) 1045, 1117, 1163
Bsp13I TCCGGA 1 cut(s) 1082
Bsp1407I TGTACA 1 cut(s) 553
Bsp143I GATC 7 cut(s) 226, 394, 667, 1123, 1240, 1282, 1383
BspACI CCGC 7 cut(s) 267, 273, 458, 505, 1256, 1288, 1357
BspANI GGCC 5 cut(s) 483, 675, 775, 1291, 1300
BspCNI CTCAG 3 cut(s) 315, 334, 427
BspEI TCCGGA 1 cut(s) 1082
BspLI GGNNCC 2 cut(s) 26, 694
BspMI ACCTGC 1 cut(s) 1261
BspPI GGATC 2 cut(s) 1235, 1378
BspQI GCTCTTC 1 cut(s) 780
BspT107I GGYRCC 2 cut(s) 24, 692
BsrDI GCAATG 1 cut(s) 295
BsrGI TGTACA 1 cut(s) 553
BsrI ACTGG 1 cut(s) 1213
BssECI CCNNGG 1 cut(s) 1292
BssMI GATC 7 cut(s) 226, 394, 667, 1123, 1240, 1282, 1383
BssNI GRCGYC 1 cut(s) 25
BssSI CACGAG 1 cut(s) 663
BssT1I CCWWGG 1 cut(s) 1292
Bst2BI CACGAG 1 cut(s) 663
Bst2UI CCWGG 2 cut(s) 474, 586
Bst6I CTCTTC 1 cut(s) 780
BstACI GRCGYC 1 cut(s) 25
BstAUI TGTACA 1 cut(s) 553
BstC8I GCNNGC 8 cut(s) 336, 777, 792, 894, 943, 1029, 1339, 1357
BstDEI CTNAG 5 cut(s) 104, 302, 321, 435, 906
BstENI CCTNNNNNAGG 1 cut(s) 477
BstF5I GGATG 2 cut(s) 1264, 1363
BstH2I RGCGCY 2 cut(s) 28, 416
BstHHI GCGC 3 cut(s) 27, 379, 415
BstKTI GATC 7 cut(s) 229, 397, 670, 1126, 1243, 1285, 1386
BstMAI GTCTC 1 cut(s) 1084
BstMBI GATC 7 cut(s) 226, 394, 667, 1123, 1240, 1282, 1383
BstMWI GCNNNNNNNGC 5 cut(s) 374, 412, 581, 974, 1297
BstNI CCWGG 2 cut(s) 474, 586
BstNSI RCATGY 1 cut(s) 216
BstSCI CCNGG 2 cut(s) 472, 584
BstSFI CTRYAG 1 cut(s) 780
BstSLI GKGCMC 1 cut(s) 1163
BstV1I GCAGC 4 cut(s) 256, 907, 957, 964
BstV2I GAAGAC 4 cut(s) 123, 309, 482, 884
BsuRI GGCC 5 cut(s) 483, 675, 775, 1291, 1300
BtsCI GGATG 2 cut(s) 1264, 1363
BveI ACCTGC 1 cut(s) 1261
Cac8I GCNNGC 8 cut(s) 336, 777, 792, 894, 943, 1029, 1339, 1357
CfoI GCGC 3 cut(s) 27, 379, 415
Cfr13I GGNCC 2 cut(s) 470, 773
Csp6I GTAC 3 cut(s) 554, 693, 1179
CviAII CATG 6 cut(s) 127, 213, 562, 572, 619, 1195
CviQI GTAC 3 cut(s) 554, 693, 1179
DdeI CTNAG 5 cut(s) 104, 302, 321, 435, 906
DinI GGCGCC 1 cut(s) 26
DpnI GATC 7 cut(s) 228, 396, 669, 1125, 1242, 1284, 1385
DpnII GATC 7 cut(s) 226, 394, 667, 1123, 1240, 1282, 1383
DrdI GACNNNNNNGTC 1 cut(s) 1190
DseDI GACNNNNNNGTC 1 cut(s) 1190
EaeI YGGCCR 3 cut(s) 673, 1289, 1298
Eam1104I CTCTTC 1 cut(s) 780
EarI CTCTTC 1 cut(s) 780
Eco130I CCWWGG 1 cut(s) 1292
Eco147I AGGCCT 1 cut(s) 483
Eco24I GRGCYC 2 cut(s) 1045, 1117
Eco47I GGWCC 1 cut(s) 470
Eco47III AGCGCT 1 cut(s) 414
Eco57I CTGAAG 3 cut(s) 896, 921, 1287
Eco88I CYCGRG 2 cut(s) 795, 963
EcoNI CCTNNNNNAGG 1 cut(s) 477
EcoRII CCWGG 2 cut(s) 472, 584
EcoT14I CCWWGG 1 cut(s) 1292
EcoT38I GRGCYC 2 cut(s) 1045, 1117
EgeI GGCGCC 1 cut(s) 26
EheI GGCGCC 1 cut(s) 26
ErhI CCWWGG 1 cut(s) 1292
FaeI CATG 6 cut(s) 130, 216, 565, 575, 622, 1198
FalI AAGNNNNNCTT 2 cut(s) 399, 431
FaqI GGGAC 2 cut(s) 93, 201
FatI CATG 6 cut(s) 126, 212, 561, 571, 618, 1194
FauI CCCGC 1 cut(s) 1364
FauNDI CATATG 2 cut(s) 113, 724
FbaI TGATCA 2 cut(s) 394, 1123
Fnu4HI GCNGC 6 cut(s) 270, 273, 921, 946, 978, 1289
FokI GGATG 2 cut(s) 1271, 1350
FriOI GRGCYC 2 cut(s) 1045, 1117
Fsp4HI GCNGC 6 cut(s) 270, 273, 921, 946, 978, 1289
GlaI GCGC 3 cut(s) 26, 378, 414
GluI GCNGC 6 cut(s) 270, 273, 921, 946, 978, 1289
GsaI CCCAGC 1 cut(s) 1173
GsuI CTGGAG 1 cut(s) 1031
HaeII RGCGCY 2 cut(s) 28, 416
HaeIII GGCC 5 cut(s) 483, 675, 775, 1291, 1300
HapII CCGG 1 cut(s) 1083
HhaI GCGC 3 cut(s) 27, 379, 415
Hin1I GRCGYC 1 cut(s) 25
Hin1II CATG 6 cut(s) 130, 216, 565, 575, 622, 1198
Hin6I GCGC 3 cut(s) 25, 377, 413
HinP1I GCGC 3 cut(s) 25, 377, 413
HinfI GANTC 5 cut(s) 145, 880, 902, 961, 993
HpaII CCGG 1 cut(s) 1083
HphI GGTGA 2 cut(s) 305, 815
Hpy166II GTNNAC 2 cut(s) 119, 554
Hpy188I TCNGA 6 cut(s) 17, 84, 193, 876, 1047, 1374
Hpy188III TCNNGA 7 cut(s) 636, 665, 752, 797, 1010, 1083, 1135
Hpy8I GTNNAC 2 cut(s) 119, 554
HpyAV CCTTC 3 cut(s) 57, 951, 1068
HpyF10VI GCNNNNNNNGC 5 cut(s) 374, 412, 581, 974, 1297
HpyF3I CTNAG 5 cut(s) 104, 302, 321, 435, 906
Hsp92I GRCGYC 1 cut(s) 25
Hsp92II CATG 6 cut(s) 130, 216, 565, 575, 622, 1198
HspAI GCGC 3 cut(s) 25, 377, 413
KasI GGCGCC 1 cut(s) 24
Kpn2I TCCGGA 1 cut(s) 1082
KpnI GGTACC 1 cut(s) 696
Ksp22I TGATCA 2 cut(s) 394, 1123
Kzo9I GATC 7 cut(s) 226, 394, 667, 1123, 1240, 1282, 1383
LguI GCTCTTC 1 cut(s) 780
LmnI GCTCC 1 cut(s) 361
Lsp1109I GCAGC 4 cut(s) 256, 907, 957, 964
LweI GCATC 4 cut(s) 697, 796, 1103, 1400
MaeIII GTNAC 2 cut(s) 257, 460
MalI GATC 7 cut(s) 228, 396, 669, 1125, 1242, 1284, 1385
MboI GATC 7 cut(s) 226, 394, 667, 1123, 1240, 1282, 1383
MfeI CAATTG 2 cut(s) 897, 1032
MhlI GDGCHC 3 cut(s) 1045, 1117, 1163
MlsI TGGCCA 2 cut(s) 675, 1300
MluCI AATT 7 cut(s) 428, 442, 608, 821, 897, 924, 1032
MluNI TGGCCA 2 cut(s) 675, 1300
Mly113I GGCGCC 1 cut(s) 25
MlyI GAGTC 3 cut(s) 874, 955, 1002
MmeI TCCRAC 1 cut(s) 230
Mox20I TGGCCA 2 cut(s) 675, 1300
MroI TCCGGA 1 cut(s) 1082
MscI TGGCCA 2 cut(s) 675, 1300
MseI TTAA 4 cut(s) 431, 534, 590, 915
Msp20I TGGCCA 2 cut(s) 675, 1300
MspA1I CMGCKG 3 cut(s) 255, 269, 275
MspI CCGG 1 cut(s) 1083
MspR9I CCNGG 2 cut(s) 474, 586
MunI CAATTG 2 cut(s) 897, 1032
Mva1269I GAATGC 1 cut(s) 1359
MvaI CCWGG 2 cut(s) 474, 586
MwoI GCNNNNNNNGC 5 cut(s) 374, 412, 581, 974, 1297
NarI GGCGCC 1 cut(s) 25
NdeI CATATG 2 cut(s) 113, 724
NdeII GATC 7 cut(s) 226, 394, 667, 1123, 1240, 1282, 1383
NlaIII CATG 6 cut(s) 130, 216, 565, 575, 622, 1198
NlaIV GGNNCC 2 cut(s) 26, 694
NmeAIII GCCGAG 1 cut(s) 1096
NmuCI GTSAC 1 cut(s) 257
NspI RCATGY 1 cut(s) 216
PaeR7I CTCGAG 2 cut(s) 795, 963
PaqCI CACCTGC 1 cut(s) 1261
PceI AGGCCT 1 cut(s) 483
PciSI GCTCTTC 1 cut(s) 780
PctI GAATGC 1 cut(s) 1359
PfeI GAWTC 2 cut(s) 145, 902
PflMI CCANNNNNTGG 1 cut(s) 548
PkrI GCNGC 6 cut(s) 271, 274, 922, 947, 979, 1290
PleI GAGTC 3 cut(s) 874, 955, 1001
PluTI GGCGCC 1 cut(s) 28
PpsI GAGTC 3 cut(s) 874, 955, 1001
PshBI ATTAAT 1 cut(s) 915
Psp6I CCWGG 2 cut(s) 472, 584
PspFI CCCAGC 1 cut(s) 1169
PspGI CCWGG 2 cut(s) 472, 584
PspN4I GGNNCC 2 cut(s) 26, 694
PspPI GGNCC 2 cut(s) 470, 773
PspXI VCTCGAGB 1 cut(s) 963
PvuII CAGCTG 1 cut(s) 255
RsaI GTAC 3 cut(s) 555, 694, 1180
RsaNI GTAC 3 cut(s) 554, 693, 1179
SapI GCTCTTC 1 cut(s) 780
SaqAI TTAA 4 cut(s) 431, 534, 590, 915
SatI GCNGC 6 cut(s) 270, 273, 921, 946, 978, 1289
Sau3AI GATC 7 cut(s) 226, 394, 667, 1123, 1240, 1282, 1383
Sau96I GGNCC 2 cut(s) 470, 773
SchI GAGTC 3 cut(s) 874, 955, 1002
ScrFI CCNGG 2 cut(s) 474, 586
SduI GDGCHC 3 cut(s) 1045, 1117, 1163
SfaNI GCATC 4 cut(s) 697, 796, 1103, 1400
SfcI CTRYAG 1 cut(s) 780
SfiI GGCCNNNNNGGCC 1 cut(s) 1297
SfoI GGCGCC 1 cut(s) 26
Sfr274I CTCGAG 2 cut(s) 795, 963
SinI GGWCC 1 cut(s) 470
SlaI CTCGAG 2 cut(s) 795, 963
SmlI CTYRAG 4 cut(s) 757, 795, 882, 963
SmoI CTYRAG 4 cut(s) 757, 795, 882, 963
Sse9I AATT 7 cut(s) 428, 442, 608, 821, 897, 924, 1032
SseBI AGGCCT 1 cut(s) 483
SsiI CCGC 7 cut(s) 267, 273, 458, 505, 1256, 1288, 1357
SspDI GGCGCC 1 cut(s) 24
SspI AATATT 2 cut(s) 913, 1070
StuI AGGCCT 1 cut(s) 483
StyD4I CCNGG 2 cut(s) 472, 584
StyI CCWWGG 1 cut(s) 1292
TaqI TCGA 2 cut(s) 796, 964
TasI AATT 7 cut(s) 428, 442, 608, 821, 897, 924, 1032
TatI WGTACW 2 cut(s) 553, 1178
TauI GCSGC 2 cut(s) 275, 1291
TfiI GAWTC 2 cut(s) 145, 902
Tru1I TTAA 4 cut(s) 431, 534, 590, 915
Tru9I TTAA 4 cut(s) 431, 534, 590, 915
TseFI GTSAC 1 cut(s) 257
TseI GCWGC 4 cut(s) 269, 920, 945, 977
Tsp45I GTSAC 1 cut(s) 257
TspDTI ATGAA 5 cut(s) 607, 851, 1275, 1352, 1361
TspGWI ACGGA 1 cut(s) 157
Van91I CCANNNNNTGG 1 cut(s) 548
VpaK11BI GGWCC 1 cut(s) 470
VspI ATTAAT 1 cut(s) 915
XagI CCTNNNNNAGG 1 cut(s) 477
XapI RAATTY 2 cut(s) 442, 821
XceI RCATGY 1 cut(s) 216
XhoI CTCGAG 2 cut(s) 795, 963
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.