Prupe.2G149400_v2.0.a1

Synaptotagmin-like mitochondrial-lipid-binding domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
20492136 .. 20499435
7300 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G149400.1

Sequence Viewer

Length: 1554 bp
ATGGGGTTGATTTCGGGGATTCTGATGGGGATGGTCTTCGGGATTGCATTGATGGCCGGGTGGCGTCACATGATGAGGTACCGAAGCACCAAGCGAGTCGCTAAGGCAGTTGACATAAAACTCCTTGGATCACTAAACAGAGACGATTTGAAGAAAATATGCGGGGACAATTTTCCTGAATGGATATCTTTCCCCGTCTTTGAACAGGTGAAATGGTTGAATAAGCAACTGACCAAATTGTGGCCATATGTTGCAGATGCTGCAGAAATGGTGATAAAAGATTCTGTTGAGCCACTATTGGAAGAATACCGACCGACCGGAATTACTTCATTGAAGTTCAGCAAACTGTCTCTTGGTACTGTGGCACCCAAAATTGAAGGTATTCGTGTTCAAAGCCTCAAGAAAGGTCAAATTACAATGGACATTGATTTTCGTTGGGGTGGTGATCCAAACATCGTATTAGGTGTTGAAGCTGCACTCGTTGCCTCAATTCCCATTCAGCTGAAGGATCTTCAAGTTTTTACTGTTGTTCGTGTAATTTTCCAACTTGCTGAAGAGATCCCTTGTGTATCTGCAGTTGTTGTTGCTCTACTTGCAGAGCCGAAGCCTAGAATTGATTATACTCTGAAGGCTGTTGGCGGAAGCTTGACAGCCCTCCCTGGAATTTCAGATATGATTGATGATACTGTGGAATCGATTGTCACAGACATGCTCCAGTGGCCACATAGAATTGTTGTTCCAATTGGTGGTGTGCCTGTTGACACAAGCGAATTGGAGCTTAAACCTCAAGGAAAGCTCACCTTGACTGTAGTGAGAGCAAATGACTTAAAGAACATGGAAATGATTGGAAAATCCGACCCTTATGTTGTTGTCTACATTCGTCCATTATTCAAGGTTAAGACTAAGGTCATTGATAACAATCTGAATCCTGTTTGGGATCAAACGTTCGAGTTGATTGCAGAAGACAAGGAGACTCAATCACTTATTCTTGAGGTTTTTGATAAGGACATCGGGCAAGACAAGCGATTGGGAGTGACAAAATTACCTTTGATTGACCTGGAAGCAGAAACTGTGAAAGAGATTGAACTGAGATTGCAGCCATCACTTAACATGCTAAAAATAAAAGAAAAGAAGGATAGAGGAACTATTACTATCAAGGTCTTTTACCATGAATTTAACAAGGAAGAGCAGTTGATTTCTTTAGAGGAAGAGAAGAGGATCTTAGAAGAAGAAACTTCAGTGGTTGGATCTGGTGTTGGATTGGTGGGTACTGGCCTTGGTGCTGGGGCTGGGCTCGTGGGAAGTGGCGTTACCGCTGGAGCTGGGCTTGTGGGAAGTGGCGTTACTGCCGGAGCTGGGCTTGTGGGGACTGGCGTTAATTCTGGGGTTGGAATGGTCGGGAGTGGCTTCGGAGCTGTTGGTAGTGGCCTTAGCAAAGCCGGGAAGTTCATGGGTAGGACCATCACCGGGCAATCGAGTCATTCAAGGAGAAGAAGTGGGTCTACAACTCCAGTGGGTAGTGTCCAAGAAAATGGTGGTGCAAAGCCACGGTAA

Protein Analysis

518

Amino Acids

55.89

Weight (kDa)

7.65

Isoelectric Point (pI)

29.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012269)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 78
AccB1I GGYRCC 2 cut(s) 78, 364
AccB7I CCANNNNNTGG 2 cut(s) 240, 746
AccI GTMKAC 2 cut(s) 873, 1502
AciI CCGC 3 cut(s) 162, 639, 1314
AclI AACGTT 1 cut(s) 944
AclWI GGATC 7 cut(s) 136, 440, 516, 553, 945, 1226, 1255
AcoI YGGCCR 3 cut(s) 54, 242, 719
AcsI RAATTY 2 cut(s) 663, 1172
AcuI CTGAAG 4 cut(s) 524, 573, 647, 1221
AcyI GRCGYC 1 cut(s) 64
AfaI GTAC 3 cut(s) 80, 358, 1270
AfiI CCNNNNNNNGG 4 cut(s) 240, 746, 1356, 1467
AjnI CCWGG 2 cut(s) 658, 1056
AloI GAACNNNNNNTCC 2 cut(s) 929, 961
AluBI AGCT 8 cut(s) 473, 502, 645, 778, 796, 1322, 1355, 1415
AluI AGCT 8 cut(s) 473, 502, 645, 778, 796, 1322, 1355, 1415
Alw26I GTCTC 3 cut(s) 135, 354, 965
AlwI GGATC 7 cut(s) 136, 440, 516, 553, 945, 1226, 1255
AlwNI CAGNNNCTG 2 cut(s) 260, 1070
AoxI GGCC 5 cut(s) 54, 242, 719, 1273, 1426
ApeKI GCWGC 3 cut(s) 260, 473, 1096
ApoI RAATTY 2 cut(s) 663, 1172
Asp700I GAANNNNTTC 2 cut(s) 325, 381
Asp718I GGTACC 1 cut(s) 78
AspS9I GGNCC 1 cut(s) 1458
AsuC2I CCSGG 3 cut(s) 58, 1441, 1468
AsuHPI GGTGA 5 cut(s) 220, 283, 455, 790, 1456
AvaII GGWCC 1 cut(s) 1458
BalI TGGCCA 2 cut(s) 244, 721
BanI GGYRCC 2 cut(s) 78, 364
BanII GRGCYC 1 cut(s) 1296
BarI GAAGNNNNNNTAC 6 cut(s) 1294, 1326, 1327, 1359, 1486, 1518
BauI CACGAG 1 cut(s) 1295
BbsI GAAGAC 2 cut(s) 28, 969
BbvI GCAGC 3 cut(s) 247, 460, 1108
BccI CCATC 5 cut(s) 19, 25, 46, 1108, 1469
BcgI CGANNNNNNTGC 2 cut(s) 938, 972
BciT130I CCWGG 2 cut(s) 660, 1058
BcnI CCSGG 3 cut(s) 58, 1441, 1468
BcoDI GTCTC 3 cut(s) 135, 354, 965
BfaI CTAG 1 cut(s) 609
BfmI CTRYAG 3 cut(s) 261, 573, 807
BisI GCNGC 3 cut(s) 261, 474, 1097
BlsI GCNGC 3 cut(s) 262, 475, 1098
Bme1390I CCNGG 5 cut(s) 58, 660, 1058, 1441, 1468
Bme18I GGWCC 1 cut(s) 1458
BmgT120I GGNCC 1 cut(s) 1458
BmiI GGNNCC 2 cut(s) 80, 366
BmrFI CCNGG 5 cut(s) 58, 660, 1058, 1441, 1468
BmsI GCATC 1 cut(s) 247
BoxI GACNNNNGTC 1 cut(s) 905
BpiI GAAGAC 2 cut(s) 28, 969
BpmI CTGGAG 3 cut(s) 698, 1338, 1494
Bpu10I CCTNAGC 2 cut(s) 102, 1430
BpuEI CTTGAG 3 cut(s) 383, 771, 1010
BpuMI CCSGG 3 cut(s) 58, 1441, 1468
Bsa29I ATCGAT 1 cut(s) 695
BsaBI GATNNNNATC 1 cut(s) 918
BsaHI GRCGYC 1 cut(s) 64
BsaJI CCNNGG 4 cut(s) 124, 658, 1276, 1547
BsaWI WCCGGW 1 cut(s) 317
BsaXI ACNNNNNCTCC 2 cut(s) 1480, 1510
Bsc4I CCNNNNNNNGG 4 cut(s) 240, 746, 1356, 1467
Bse1I ACTGG 4 cut(s) 715, 1276, 1375, 1511
Bse8I GATNNNNATC 1 cut(s) 918
BseBI CCWGG 2 cut(s) 660, 1058
BseCI ATCGAT 1 cut(s) 695
BseDI CCNNGG 4 cut(s) 124, 658, 1276, 1547
BseGI GGATG 1 cut(s) 36
BseJI GATNNNNATC 1 cut(s) 918
BseLI CCNNNNNNNGG 4 cut(s) 240, 746, 1356, 1467
BseMII CTCAG 1 cut(s) 1079
BseNI ACTGG 4 cut(s) 715, 1276, 1375, 1511
BseXI GCAGC 3 cut(s) 247, 460, 1108
BseYI CCCAGC 4 cut(s) 1283, 1289, 1322, 1355
BsgI GTGCAG 1 cut(s) 459
Bsh1285I CGRYCG 2 cut(s) 314, 318
BshFI GGCC 5 cut(s) 56, 244, 721, 1275, 1428
BshNI GGYRCC 2 cut(s) 78, 364
BshVI ATCGAT 1 cut(s) 695
BsiEI CGRYCG 2 cut(s) 314, 318
BsiSI CCGG 5 cut(s) 57, 318, 1350, 1440, 1467
BslFI GGGAC 2 cut(s) 179, 1381
BslI CCNNNNNNNGG 4 cut(s) 240, 746, 1356, 1467
BsmAI GTCTC 3 cut(s) 135, 354, 965
BsmBI CGTCTC 1 cut(s) 135
BsmFI GGGAC 2 cut(s) 179, 1381
BsnI GGCC 5 cut(s) 56, 244, 721, 1275, 1428
Bsp1286I GDGCHC 1 cut(s) 1296
Bsp143I GATC 7 cut(s) 128, 445, 508, 558, 937, 1218, 1247
BspACI CCGC 3 cut(s) 162, 639, 1314
BspANI GGCC 5 cut(s) 56, 244, 721, 1275, 1428
BspCNI CTCAG 1 cut(s) 1080
BspDI ATCGAT 1 cut(s) 695
BspLI GGNNCC 2 cut(s) 80, 366
BspMAI CTGCAG 2 cut(s) 265, 577
BspPI GGATC 7 cut(s) 136, 440, 516, 553, 945, 1226, 1255
BspQI GCTCTTC 1 cut(s) 1179
BspT107I GGYRCC 2 cut(s) 78, 364
BsrI ACTGG 4 cut(s) 715, 1276, 1375, 1511
BssECI CCNNGG 4 cut(s) 124, 658, 1276, 1547
BssMI GATC 7 cut(s) 128, 445, 508, 558, 937, 1218, 1247
BssNI GRCGYC 1 cut(s) 64
BssSI CACGAG 1 cut(s) 1295
BssT1I CCWWGG 2 cut(s) 124, 1276
Bst2BI CACGAG 1 cut(s) 1295
Bst2UI CCWGG 2 cut(s) 660, 1058
Bst4CI ACNGT 7 cut(s) 348, 361, 526, 688, 808, 1072, 1551
Bst6I CTCTTC 4 cut(s) 549, 1179, 1203, 1208
BstACI GRCGYC 1 cut(s) 64
BstAPI GCANNNNNTGC 2 cut(s) 260, 482
BstDEI CTNAG 5 cut(s) 102, 903, 1088, 1222, 1430
BstDSI CCRYGG 1 cut(s) 1547
BstF5I GGATG 1 cut(s) 36
BstKTI GATC 7 cut(s) 131, 448, 511, 561, 940, 1221, 1250
BstMAI GTCTC 3 cut(s) 135, 354, 965
BstMBI GATC 7 cut(s) 128, 445, 508, 558, 937, 1218, 1247
BstMCI CGRYCG 2 cut(s) 314, 318
BstMWI GCNNNNNNNGC 6 cut(s) 53, 260, 482, 593, 718, 1021
BstNI CCWGG 2 cut(s) 660, 1058
BstNSI RCATGY 2 cut(s) 712, 1114
BstPAI GACNNNNGTC 1 cut(s) 905
BstSCI CCNGG 5 cut(s) 56, 658, 1056, 1439, 1466
BstSFI CTRYAG 3 cut(s) 261, 573, 807
BstV1I GCAGC 3 cut(s) 247, 460, 1108
BstV2I GAAGAC 2 cut(s) 28, 969
BstX2I RGATCY 4 cut(s) 508, 558, 1218, 1247
BstXI CCANNNNNNTGG 1 cut(s) 1532
BstYI RGATCY 4 cut(s) 508, 558, 1218, 1247
Bsu15I ATCGAT 1 cut(s) 695
BsuRI GGCC 5 cut(s) 56, 244, 721, 1275, 1428
BsuTUI ATCGAT 1 cut(s) 695
BtgI CCRYGG 1 cut(s) 1547
BtsCI GGATG 1 cut(s) 36
BtsIMutI CAGTG 3 cut(s) 722, 1245, 1518
CaiI CAGNNNCTG 2 cut(s) 260, 1070
Cfr13I GGNCC 1 cut(s) 1458
ClaI ATCGAT 1 cut(s) 695
CseI GACGC 1 cut(s) 53
Csp6I GTAC 3 cut(s) 79, 357, 1269
CspCI CAANNNNNGTGG 2 cut(s) 1494, 1529
CviAII CATG 6 cut(s) 70, 709, 835, 1111, 1169, 1450
CviQI GTAC 3 cut(s) 79, 357, 1269
DdeI CTNAG 5 cut(s) 102, 903, 1088, 1222, 1430
DpnI GATC 7 cut(s) 130, 447, 510, 560, 939, 1220, 1249
DpnII GATC 7 cut(s) 128, 445, 508, 558, 937, 1218, 1247
EaeI YGGCCR 3 cut(s) 54, 242, 719
Eam1104I CTCTTC 4 cut(s) 549, 1179, 1203, 1208
EarI CTCTTC 4 cut(s) 549, 1179, 1203, 1208
EciI GGCGGA 1 cut(s) 654
Eco130I CCWWGG 2 cut(s) 124, 1276
Eco24I GRGCYC 1 cut(s) 1296
Eco32I GATATC 1 cut(s) 186
Eco47I GGWCC 1 cut(s) 1458
Eco57I CTGAAG 4 cut(s) 524, 573, 647, 1221
EcoRII CCWGG 2 cut(s) 658, 1056
EcoRV GATATC 1 cut(s) 186
EcoT14I CCWWGG 2 cut(s) 124, 1276
EcoT38I GRGCYC 1 cut(s) 1296
ErhI CCWWGG 2 cut(s) 124, 1276
Esp3I CGTCTC 1 cut(s) 135
FaeI CATG 6 cut(s) 73, 712, 838, 1114, 1172, 1453
FalI AAGNNNNNCTT 4 cut(s) 785, 817, 1205, 1237
FaqI GGGAC 2 cut(s) 179, 1381
FatI CATG 6 cut(s) 69, 708, 834, 1110, 1168, 1449
FauI CCCGC 1 cut(s) 155
FauNDI CATATG 1 cut(s) 247
FblI GTMKAC 2 cut(s) 873, 1502
Fnu4HI GCNGC 3 cut(s) 261, 474, 1097
FokI GGATG 1 cut(s) 43
FriOI GRGCYC 1 cut(s) 1296
Fsp4HI GCNGC 3 cut(s) 261, 474, 1097
FspBI CTAG 1 cut(s) 609
GluI GCNGC 3 cut(s) 261, 474, 1097
GsaI CCCAGC 4 cut(s) 1287, 1293, 1326, 1359
GsuI CTGGAG 3 cut(s) 698, 1338, 1494
HaeIII GGCC 5 cut(s) 56, 244, 721, 1275, 1428
HapII CCGG 5 cut(s) 57, 318, 1350, 1440, 1467
HgaI GACGC 1 cut(s) 53
Hin1I GRCGYC 1 cut(s) 64
Hin1II CATG 6 cut(s) 73, 712, 838, 1114, 1172, 1453
HincII GTYRAC 2 cut(s) 112, 760
HindII GTYRAC 2 cut(s) 112, 760
HindIII AAGCTT 1 cut(s) 643
HinfI GANTC 7 cut(s) 19, 96, 281, 692, 925, 973, 1477
HpaII CCGG 5 cut(s) 57, 318, 1350, 1440, 1467
HphI GGTGA 5 cut(s) 220, 283, 455, 790, 1456
Hpy166II GTNNAC 4 cut(s) 112, 760, 874, 1503
Hpy188I TCNGA 6 cut(s) 24, 627, 670, 856, 924, 1412
Hpy188III TCNNGA 5 cut(s) 40, 176, 400, 989, 1399
Hpy8I GTNNAC 4 cut(s) 112, 760, 874, 1503
HpyAV CCTTC 4 cut(s) 371, 499, 622, 1126
HpyCH4III ACNGT 7 cut(s) 348, 361, 526, 688, 808, 1072, 1551
HpyCH4IV ACGT 1 cut(s) 944
HpyCH4V TGCA 9 cut(s) 47, 254, 263, 476, 575, 596, 959, 1096, 1541
HpyF10VI GCNNNNNNNGC 6 cut(s) 53, 260, 482, 593, 718, 1021
HpyF3I CTNAG 5 cut(s) 102, 903, 1088, 1222, 1430
HpySE526I ACGT 1 cut(s) 944
Hsp92I GRCGYC 1 cut(s) 64
Hsp92II CATG 6 cut(s) 73, 712, 838, 1114, 1172, 1453
KpnI GGTACC 1 cut(s) 82
Kzo9I GATC 7 cut(s) 128, 445, 508, 558, 937, 1218, 1247
LguI GCTCTTC 1 cut(s) 1179
LmnI GCTCC 5 cut(s) 717, 775, 1319, 1352, 1412
Lsp1109I GCAGC 3 cut(s) 247, 460, 1108
LweI GCATC 1 cut(s) 247
MaeI CTAG 1 cut(s) 609
MaeII ACGT 1 cut(s) 944
MaeIII GTNAC 5 cut(s) 65, 700, 1033, 1309, 1342
MalI GATC 7 cut(s) 130, 447, 510, 560, 939, 1220, 1249
MboI GATC 7 cut(s) 128, 445, 508, 558, 937, 1218, 1247
MfeI CAATTG 1 cut(s) 741
MflI RGATCY 4 cut(s) 508, 558, 1218, 1247
MhlI GDGCHC 1 cut(s) 1296
MlsI TGGCCA 2 cut(s) 244, 721
MluNI TGGCCA 2 cut(s) 244, 721
MlyI GAGTC 3 cut(s) 105, 967, 1486
MmeI TCCRAC 5 cut(s) 568, 879, 1225, 1237, 1369
MnlI CCTC 9 cut(s) 69, 407, 496, 665, 795, 985, 1133, 1198, 1209
Mox20I TGGCCA 2 cut(s) 244, 721
MroXI GAANNNNTTC 2 cut(s) 325, 381
MscI TGGCCA 2 cut(s) 244, 721
MseI TTAA 6 cut(s) 780, 827, 897, 1107, 1176, 1377
MslI CAYNNNNRTG 2 cut(s) 707, 839
Msp20I TGGCCA 2 cut(s) 244, 721
MspA1I CMGCKG 2 cut(s) 502, 1316
MspI CCGG 5 cut(s) 57, 318, 1350, 1440, 1467
MspR9I CCNGG 5 cut(s) 58, 660, 1058, 1441, 1468
MunI CAATTG 1 cut(s) 741
MvaI CCWGG 2 cut(s) 660, 1058
MwoI GCNNNNNNNGC 6 cut(s) 53, 260, 482, 593, 718, 1021
NciI CCSGG 3 cut(s) 58, 1441, 1468
NdeI CATATG 1 cut(s) 247
NdeII GATC 7 cut(s) 128, 445, 508, 558, 937, 1218, 1247
NlaIII CATG 6 cut(s) 73, 712, 838, 1114, 1172, 1453
NlaIV GGNNCC 2 cut(s) 80, 366
NmuCI GTSAC 3 cut(s) 65, 700, 1033
NspI RCATGY 2 cut(s) 712, 1114
PciSI GCTCTTC 1 cut(s) 1179
PdmI GAANNNNTTC 2 cut(s) 325, 381
PfeI GAWTC 4 cut(s) 19, 281, 692, 925
PflMI CCANNNNNTGG 2 cut(s) 240, 746
PkrI GCNGC 3 cut(s) 262, 475, 1098
PleI GAGTC 3 cut(s) 104, 967, 1485
PpsI GAGTC 3 cut(s) 104, 967, 1485
PshAI GACNNNNGTC 1 cut(s) 905
Psp1406I AACGTT 1 cut(s) 944
Psp6I CCWGG 2 cut(s) 658, 1056
PspFI CCCAGC 4 cut(s) 1283, 1289, 1322, 1355
PspGI CCWGG 2 cut(s) 658, 1056
PspN4I GGNNCC 2 cut(s) 80, 366
PspPI GGNCC 1 cut(s) 1458
PstI CTGCAG 2 cut(s) 265, 577
PstNI CAGNNNCTG 2 cut(s) 260, 1070
PsuI RGATCY 4 cut(s) 508, 558, 1218, 1247
PvuII CAGCTG 1 cut(s) 502
RsaI GTAC 3 cut(s) 80, 358, 1270
RsaNI GTAC 3 cut(s) 79, 357, 1269
RseI CAYNNNNRTG 2 cut(s) 707, 839
SapI GCTCTTC 1 cut(s) 1179
SaqAI TTAA 6 cut(s) 780, 827, 897, 1107, 1176, 1377
SatI GCNGC 3 cut(s) 261, 474, 1097
Sau3AI GATC 7 cut(s) 128, 445, 508, 558, 937, 1218, 1247
Sau96I GGNCC 1 cut(s) 1458
SchI GAGTC 3 cut(s) 105, 967, 1486
ScrFI CCNGG 5 cut(s) 58, 660, 1058, 1441, 1468
SduI GDGCHC 1 cut(s) 1296
SfaNI GCATC 1 cut(s) 247
SfcI CTRYAG 3 cut(s) 261, 573, 807
SinI GGWCC 1 cut(s) 1458
SmiMI CAYNNNNRTG 2 cut(s) 707, 839
SmlI CTYRAG 3 cut(s) 398, 786, 989
SmoI CTYRAG 3 cut(s) 398, 786, 989
SsiI CCGC 3 cut(s) 162, 639, 1314
SspMI CTAG 1 cut(s) 609
StyD4I CCNGG 5 cut(s) 56, 658, 1056, 1439, 1466
StyI CCWWGG 2 cut(s) 124, 1276
TaaI ACNGT 7 cut(s) 348, 361, 526, 688, 808, 1072, 1551
TaiI ACGT 1 cut(s) 947
TaqI TCGA 3 cut(s) 695, 948, 1475
TaqII GACCGA 1 cut(s) 328
TfiI GAWTC 4 cut(s) 19, 281, 692, 925
Tru1I TTAA 6 cut(s) 780, 827, 897, 1107, 1176, 1377
Tru9I TTAA 6 cut(s) 780, 827, 897, 1107, 1176, 1377
TscAI CASTG 3 cut(s) 722, 1245, 1518
TseFI GTSAC 3 cut(s) 65, 700, 1033
TseI GCWGC 3 cut(s) 260, 473, 1096
Tsp45I GTSAC 3 cut(s) 65, 700, 1033
TspDTI ATGAA 3 cut(s) 318, 1185, 1438
TspRI CASTG 3 cut(s) 722, 1245, 1518
Van91I CCANNNNNTGG 2 cut(s) 240, 746
VpaK11BI GGWCC 1 cut(s) 1458
XapI RAATTY 2 cut(s) 663, 1172
XceI RCATGY 2 cut(s) 712, 1114
XcmI CCANNNNNNNNNTGG 1 cut(s) 1532
XmiI GTMKAC 2 cut(s) 873, 1502
XmnI GAANNNNTTC 2 cut(s) 325, 381
XspI CTAG 1 cut(s) 609
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.