Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G61170 |
| fragaria_vesca | FvH4_5g34470 |
| malus_domestica | MD07G1126900.v1.1 |
| prunus_persica | Prupe.2G157100_v2.0.a1 |
| pyrus_communis | pycom07g12240 |
| rosa_chinensis | RchiOBHm_Chr7g0235091 |
| rosa_multiflora | Rmu_sc0002239.1_g000010 |
| rosa_roxburghii | Rroxscaffold_3G00226310 |
| rosa_rugosa | Rorug07G0287300 Rorug07G0287400 |
| rosa_samantha | Rh7AG442400 Rh7BG415000 Rh7CG463300 |
| rosa_wichuraiana | Rw7G036780 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1581 |
| Acc16I | TGCGCA | 1 cut(s) | 1171 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 303 |
| AccI | GTMKAC | 1 cut(s) | 154 |
| AciI | CCGC | 1 cut(s) | 169 |
| AclWI | GGATC | 1 cut(s) | 1307 |
| AcoI | YGGCCR | 1 cut(s) | 1369 |
| AcsI | RAATTY | 8 cut(s) | 8, 28, 121, 1377, 1574, 2013, 2106, 2286 |
| AcuI | CTGAAG | 4 cut(s) | 708, 1019, 1070, 2097 |
| AcvI | CACGTG | 1 cut(s) | 604 |
| AcyI | GRCGYC | 1 cut(s) | 1473 |
| AfaI | GTAC | 3 cut(s) | 404, 632, 1857 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 303 |
| AflII | CTTAAG | 2 cut(s) | 1772, 2018 |
| AflIII | ACRYGT | 3 cut(s) | 405, 531, 1947 |
| AjnI | CCWGG | 4 cut(s) | 114, 1224, 1717, 2026 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 771, 803 |
| Alw21I | GWGCWC | 3 cut(s) | 434, 1731, 2278 |
| Alw26I | GTCTC | 1 cut(s) | 572 |
| AlwI | GGATC | 1 cut(s) | 1307 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 737, 1724 |
| AoxI | GGCC | 4 cut(s) | 392, 1369, 1402, 2212 |
| ApeKI | GCWGC | 8 cut(s) | 227, 376, 1043, 1886, 1958, 1961, 1979, 2034 |
| ApoI | RAATTY | 8 cut(s) | 8, 28, 121, 1377, 1574, 2013, 2106, 2286 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 465, 758, 2089 |
| AspLEI | GCGC | 3 cut(s) | 552, 1172, 1761 |
| AspS9I | GGNCC | 2 cut(s) | 1218, 1721 |
| AsuC2I | CCSGG | 1 cut(s) | 2303 |
| AsuHPI | GGTGA | 4 cut(s) | 470, 656, 1084, 2251 |
| AsuII | TTCGAA | 1 cut(s) | 1686 |
| AvaII | GGWCC | 2 cut(s) | 1218, 1721 |
| AxyI | CCTNAGG | 1 cut(s) | 422 |
| BalI | TGGCCA | 1 cut(s) | 1371 |
| BanII | GRGCYC | 2 cut(s) | 769, 2256 |
| BbrPI | CACGTG | 1 cut(s) | 604 |
| BbsI | GAAGAC | 4 cut(s) | 300, 1100, 1476, 1652 |
| Bbv12I | GWGCWC | 3 cut(s) | 434, 1731, 2278 |
| BbvCI | CCTCAGC | 1 cut(s) | 1782 |
| BbvI | GCAGC | 8 cut(s) | 214, 388, 1030, 1898, 1948, 1966, 1970, 2046 |
| BccI | CCATC | 6 cut(s) | 81, 305, 641, 1030, 1811, 1962 |
| BciT130I | CCWGG | 4 cut(s) | 116, 1226, 1719, 2028 |
| BciVI | GTATCC | 1 cut(s) | 2147 |
| BclI | TGATCA | 2 cut(s) | 1006, 2139 |
| BcnI | CCSGG | 1 cut(s) | 2303 |
| BcoDI | GTCTC | 1 cut(s) | 572 |
| BfaI | CTAG | 4 cut(s) | 720, 1965, 2216, 2270 |
| BfmI | CTRYAG | 1 cut(s) | 1956 |
| BfoI | RGCGCY | 1 cut(s) | 1762 |
| BfrI | CTTAAG | 2 cut(s) | 1772, 2018 |
| BfuI | GTATCC | 1 cut(s) | 2147 |
| BisI | GCNGC | 8 cut(s) | 228, 377, 1044, 1887, 1959, 1962, 1980, 2035 |
| BlsI | GCNGC | 8 cut(s) | 229, 378, 1045, 1888, 1960, 1963, 1981, 2036 |
| Bme1390I | CCNGG | 5 cut(s) | 116, 1226, 1719, 2028, 2303 |
| Bme18I | GGWCC | 2 cut(s) | 1218, 1721 |
| BmgT120I | GGNCC | 2 cut(s) | 1218, 1721 |
| BmiI | GGNNCC | 4 cut(s) | 1812, 1911, 2025, 2255 |
| BmrFI | CCNGG | 5 cut(s) | 116, 1226, 1719, 2028, 2303 |
| BmrI | ACTGGG | 3 cut(s) | 97, 484, 1883 |
| BmsI | GCATC | 5 cut(s) | 265, 770, 1421, 1966, 2021 |
| BmuI | ACTGGG | 3 cut(s) | 97, 484, 1883 |
| BpiI | GAAGAC | 4 cut(s) | 300, 1100, 1476, 1652 |
| Bpu10I | CCTNAGC | 4 cut(s) | 768, 1725, 1762, 1782 |
| Bpu14I | TTCGAA | 1 cut(s) | 1686 |
| BpuEI | CTTGAG | 2 cut(s) | 401, 1196 |
| BpuMI | CCSGG | 1 cut(s) | 2303 |
| Bsa29I | ATCGAT | 2 cut(s) | 1691, 2121 |
| BsaAI | YACGTR | 1 cut(s) | 604 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2138 |
| BsaHI | GRCGYC | 1 cut(s) | 1473 |
| BsaJI | CCNNGG | 1 cut(s) | 1224 |
| BsaWI | WCCGGW | 1 cut(s) | 1609 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 303 |
| Bse118I | RCCGGY | 1 cut(s) | 1232 |
| Bse1I | ACTGG | 6 cut(s) | 103, 400, 490, 1102, 1603, 1878 |
| Bse21I | CCTNAGG | 1 cut(s) | 422 |
| Bse3DI | GCAATG | 4 cut(s) | 666, 1074, 1078, 2334 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2138 |
| BseBI | CCWGG | 4 cut(s) | 116, 1226, 1719, 2028 |
| BseCI | ATCGAT | 2 cut(s) | 1691, 2121 |
| BseDI | CCNNGG | 1 cut(s) | 1224 |
| BseGI | GGATG | 6 cut(s) | 78, 205, 785, 1210, 1412, 2036 |
| BseJI | GATNNNNATC | 1 cut(s) | 2138 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 303 |
| BseMI | GCAATG | 4 cut(s) | 666, 1074, 1078, 2334 |
| BseMII | CTCAG | 4 cut(s) | 782, 1716, 1773, 1776 |
| BseNI | ACTGG | 6 cut(s) | 103, 400, 490, 1102, 1603, 1878 |
| BseRI | GAGGAG | 1 cut(s) | 2246 |
| BseXI | GCAGC | 8 cut(s) | 214, 388, 1030, 1898, 1948, 1966, 1970, 2046 |
| BsgI | GTGCAG | 2 cut(s) | 1029, 1365 |
| BshFI | GGCC | 4 cut(s) | 394, 1371, 1404, 2214 |
| BshVI | ATCGAT | 2 cut(s) | 1691, 2121 |
| BsiHKAI | GWGCWC | 3 cut(s) | 434, 1731, 2278 |
| BsiSI | CCGG | 4 cut(s) | 1233, 1401, 1610, 2302 |
| BslFI | GGGAC | 2 cut(s) | 399, 689 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 303 |
| BsmAI | GTCTC | 1 cut(s) | 572 |
| BsmFI | GGGAC | 2 cut(s) | 399, 689 |
| BsnI | GGCC | 4 cut(s) | 394, 1371, 1404, 2214 |
| Bsp119I | TTCGAA | 1 cut(s) | 1686 |
| Bsp1286I | GDGCHC | 5 cut(s) | 434, 769, 1731, 2256, 2278 |
| Bsp143I | GATC | 5 cut(s) | 856, 1006, 1299, 2127, 2139 |
| BspACI | CCGC | 1 cut(s) | 169 |
| BspANI | GGCC | 4 cut(s) | 394, 1371, 1404, 2214 |
| BspCNI | CTCAG | 4 cut(s) | 781, 1717, 1774, 1775 |
| BspDI | ATCGAT | 2 cut(s) | 1691, 2121 |
| BspHI | TCATGA | 3 cut(s) | 1255, 2130, 2182 |
| BspLI | GGNNCC | 4 cut(s) | 1812, 1911, 2025, 2255 |
| BspMAI | CTGCAG | 1 cut(s) | 1960 |
| BspPI | GGATC | 1 cut(s) | 1307 |
| BspT104I | TTCGAA | 1 cut(s) | 1686 |
| BspTI | CTTAAG | 2 cut(s) | 1772, 2018 |
| BsrDI | GCAATG | 4 cut(s) | 666, 1074, 1078, 2334 |
| BsrFI | RCCGGY | 1 cut(s) | 1232 |
| BsrI | ACTGG | 6 cut(s) | 103, 400, 490, 1102, 1603, 1878 |
| BssAI | RCCGGY | 1 cut(s) | 1232 |
| BssECI | CCNNGG | 1 cut(s) | 1224 |
| BssMI | GATC | 5 cut(s) | 856, 1006, 1299, 2127, 2139 |
| BssNI | GRCGYC | 1 cut(s) | 1473 |
| Bst2UI | CCWGG | 4 cut(s) | 116, 1226, 1719, 2028 |
| Bst4CI | ACNGT | 8 cut(s) | 616, 758, 1357, 1553, 1825, 2228, 2384, 2411 |
| BstACI | GRCGYC | 1 cut(s) | 1473 |
| BstAFI | CTTAAG | 2 cut(s) | 1772, 2018 |
| BstBAI | YACGTR | 1 cut(s) | 604 |
| BstBI | TTCGAA | 1 cut(s) | 1686 |
| BstC8I | GCNNGC | 6 cut(s) | 169, 173, 548, 684, 1327, 1849 |
| BstDEI | CTNAG | 9 cut(s) | 108, 144, 422, 768, 1268, 1725, 1762, 1782, 2369 |
| BstEII | GGTNACC | 1 cut(s) | 1228 |
| BstF5I | GGATG | 6 cut(s) | 78, 205, 785, 1210, 1412, 2036 |
| BstH2I | RGCGCY | 1 cut(s) | 1762 |
| BstHHI | GCGC | 3 cut(s) | 552, 1172, 1761 |
| BstKTI | GATC | 5 cut(s) | 859, 1009, 1302, 2130, 2142 |
| BstMAI | GTCTC | 1 cut(s) | 572 |
| BstMBI | GATC | 5 cut(s) | 856, 1006, 1299, 2127, 2139 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 233, 376, 875 |
| BstNI | CCWGG | 4 cut(s) | 116, 1226, 1719, 2028 |
| BstNSI | RCATGY | 5 cut(s) | 535, 682, 1740, 1851, 1951 |
| BstPI | GGTNACC | 1 cut(s) | 1228 |
| BstSCI | CCNGG | 5 cut(s) | 114, 1224, 1717, 2026, 2301 |
| BstSFI | CTRYAG | 1 cut(s) | 1956 |
| BstV1I | GCAGC | 8 cut(s) | 214, 388, 1030, 1898, 1948, 1966, 1970, 2046 |
| BstV2I | GAAGAC | 4 cut(s) | 300, 1100, 1476, 1652 |
| BstX2I | RGATCY | 1 cut(s) | 1299 |
| BstYI | RGATCY | 1 cut(s) | 1299 |
| Bsu15I | ATCGAT | 2 cut(s) | 1691, 2121 |
| Bsu36I | CCTNAGG | 1 cut(s) | 422 |
| BsuI | GTATCC | 1 cut(s) | 2147 |
| BsuRI | GGCC | 4 cut(s) | 394, 1371, 1404, 2214 |
| BsuTUI | ATCGAT | 2 cut(s) | 1691, 2121 |
| BtsCI | GGATG | 6 cut(s) | 78, 205, 785, 1210, 1412, 2036 |
| BtsI | GCAGTG | 1 cut(s) | 421 |
| BtsIMutI | CAGTG | 3 cut(s) | 421, 1046, 2233 |
| Cac8I | GCNNGC | 6 cut(s) | 169, 173, 548, 684, 1327, 1849 |
| CaiI | CAGNNNCTG | 2 cut(s) | 737, 1724 |
| CciI | TCATGA | 3 cut(s) | 1255, 2130, 2182 |
| CfoI | GCGC | 3 cut(s) | 552, 1172, 1761 |
| Cfr10I | RCCGGY | 1 cut(s) | 1232 |
| Cfr13I | GGNCC | 2 cut(s) | 1218, 1721 |
| ClaI | ATCGAT | 2 cut(s) | 1691, 2121 |
| CseI | GACGC | 1 cut(s) | 1481 |
| CsiI | ACCWGGT | 1 cut(s) | 1717 |
| Csp6I | GTAC | 3 cut(s) | 403, 631, 1856 |
| CviQI | GTAC | 3 cut(s) | 403, 631, 1856 |
| DdeI | CTNAG | 9 cut(s) | 108, 144, 422, 768, 1268, 1725, 1762, 1782, 2369 |
| DpnI | GATC | 5 cut(s) | 858, 1008, 1301, 2129, 2141 |
| DpnII | GATC | 5 cut(s) | 856, 1006, 1299, 2127, 2139 |
| DraI | TTTAAA | 3 cut(s) | 976, 1903, 1917 |
| EaeI | YGGCCR | 1 cut(s) | 1369 |
| Eco24I | GRGCYC | 2 cut(s) | 769, 2256 |
| Eco47I | GGWCC | 2 cut(s) | 1218, 1721 |
| Eco57I | CTGAAG | 4 cut(s) | 708, 1019, 1070, 2097 |
| Eco72I | CACGTG | 1 cut(s) | 604 |
| Eco81I | CCTNAGG | 1 cut(s) | 422 |
| Eco91I | GGTNACC | 1 cut(s) | 1228 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1721 |
| EcoO65I | GGTNACC | 1 cut(s) | 1228 |
| EcoRI | GAATTC | 1 cut(s) | 2013 |
| EcoRII | CCWGG | 4 cut(s) | 114, 1224, 1717, 2026 |
| EcoT22I | ATGCAT | 2 cut(s) | 785, 1738 |
| EcoT38I | GRGCYC | 2 cut(s) | 769, 2256 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 337, 369 |
| FaqI | GGGAC | 2 cut(s) | 399, 689 |
| FauI | CCCGC | 1 cut(s) | 176 |
| FauNDI | CATATG | 1 cut(s) | 1191 |
| FbaI | TGATCA | 2 cut(s) | 1006, 2139 |
| FblI | GTMKAC | 1 cut(s) | 154 |
| Fnu4HI | GCNGC | 8 cut(s) | 228, 377, 1044, 1887, 1959, 1962, 1980, 2035 |
| FokI | GGATG | 6 cut(s) | 65, 212, 792, 1217, 1399, 2043 |
| FriOI | GRGCYC | 2 cut(s) | 769, 2256 |
| Fsp4HI | GCNGC | 8 cut(s) | 228, 377, 1044, 1887, 1959, 1962, 1980, 2035 |
| FspBI | CTAG | 4 cut(s) | 720, 1965, 2216, 2270 |
| FspI | TGCGCA | 1 cut(s) | 1171 |
| GlaI | GCGC | 3 cut(s) | 551, 1171, 1760 |
| GluI | GCNGC | 8 cut(s) | 228, 377, 1044, 1887, 1959, 1962, 1980, 2035 |
| HaeII | RGCGCY | 1 cut(s) | 1762 |
| HaeIII | GGCC | 4 cut(s) | 394, 1371, 1404, 2214 |
| HapII | CCGG | 4 cut(s) | 1233, 1401, 1610, 2302 |
| HgaI | GACGC | 1 cut(s) | 1481 |
| HhaI | GCGC | 3 cut(s) | 552, 1172, 1761 |
| Hin1I | GRCGYC | 1 cut(s) | 1473 |
| Hin6I | GCGC | 3 cut(s) | 550, 1170, 1759 |
| HinP1I | GCGC | 3 cut(s) | 550, 1170, 1759 |
| HincII | GTYRAC | 3 cut(s) | 155, 529, 898 |
| HindII | GTYRAC | 3 cut(s) | 155, 529, 898 |
| HindIII | AAGCTT | 3 cut(s) | 351, 960, 1769 |
| HpaII | CCGG | 4 cut(s) | 1233, 1401, 1610, 2302 |
| HphI | GGTGA | 4 cut(s) | 470, 656, 1084, 2251 |
| Hpy166II | GTNNAC | 8 cut(s) | 155, 405, 461, 529, 612, 711, 898, 951 |
| Hpy188I | TCNGA | 7 cut(s) | 559, 792, 1198, 1991, 2077, 2285, 2357 |
| Hpy8I | GTNNAC | 8 cut(s) | 155, 405, 461, 529, 612, 711, 898, 951 |
| Hpy99I | CGWCG | 1 cut(s) | 2162 |
| HpyAV | CCTTC | 7 cut(s) | 240, 683, 868, 1045, 1415, 1825, 2396 |
| HpyCH4III | ACNGT | 8 cut(s) | 616, 758, 1357, 1553, 1825, 2228, 2384, 2411 |
| HpyCH4IV | ACGT | 3 cut(s) | 407, 603, 2157 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 233, 376, 875 |
| HpyF3I | CTNAG | 9 cut(s) | 108, 144, 422, 768, 1268, 1725, 1762, 1782, 2369 |
| HpySE526I | ACGT | 3 cut(s) | 407, 603, 2157 |
| Hsp92I | GRCGYC | 1 cut(s) | 1473 |
| HspAI | GCGC | 3 cut(s) | 550, 1170, 1759 |
| Ksp22I | TGATCA | 2 cut(s) | 1006, 2139 |
| Kzo9I | GATC | 5 cut(s) | 856, 1006, 1299, 2127, 2139 |
| LmnI | GCTCC | 6 cut(s) | 453, 1909, 2023, 2206, 2259, 2273 |
| Lsp1109I | GCAGC | 8 cut(s) | 214, 388, 1030, 1898, 1948, 1966, 1970, 2046 |
| LweI | GCATC | 5 cut(s) | 265, 770, 1421, 1966, 2021 |
| MabI | ACCWGGT | 1 cut(s) | 1717 |
| MaeI | CTAG | 4 cut(s) | 720, 1965, 2216, 2270 |
| MaeII | ACGT | 3 cut(s) | 407, 603, 2157 |
| MaeIII | GTNAC | 4 cut(s) | 514, 1228, 1438, 2417 |
| MalI | GATC | 5 cut(s) | 858, 1008, 1301, 2129, 2141 |
| MboI | GATC | 5 cut(s) | 856, 1006, 1299, 2127, 2139 |
| MboII | GAAGA | 9 cut(s) | 300, 968, 1012, 1105, 1481, 1652, 1985, 2004, 2090 |
| MflI | RGATCY | 1 cut(s) | 1299 |
| MhlI | GDGCHC | 5 cut(s) | 434, 769, 1731, 2256, 2278 |
| MlsI | TGGCCA | 1 cut(s) | 1371 |
| MluNI | TGGCCA | 1 cut(s) | 1371 |
| MlyI | GAGTC | 3 cut(s) | 150, 574, 1484 |
| MmeI | TCCRAC | 1 cut(s) | 2380 |
| Mox20I | TGGCCA | 1 cut(s) | 1371 |
| Mph1103I | ATGCAT | 2 cut(s) | 785, 1738 |
| MroXI | GAANNNNTTC | 3 cut(s) | 465, 758, 2089 |
| MscI | TGGCCA | 1 cut(s) | 1371 |
| MslI | CAYNNNNRTG | 2 cut(s) | 474, 864 |
| Msp20I | TGGCCA | 1 cut(s) | 1371 |
| MspA1I | CMGCKG | 4 cut(s) | 175, 1961, 2037, 2102 |
| MspCI | CTTAAG | 2 cut(s) | 1772, 2018 |
| MspI | CCGG | 4 cut(s) | 1233, 1401, 1610, 2302 |
| MspR9I | CCNGG | 5 cut(s) | 116, 1226, 1719, 2028, 2303 |
| MvaI | CCWGG | 4 cut(s) | 116, 1226, 1719, 2028 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 233, 376, 875 |
| NciI | CCSGG | 1 cut(s) | 2303 |
| NdeI | CATATG | 1 cut(s) | 1191 |
| NdeII | GATC | 5 cut(s) | 856, 1006, 1299, 2127, 2139 |
| NlaIV | GGNNCC | 4 cut(s) | 1812, 1911, 2025, 2255 |
| NmeAIII | GCCGAG | 2 cut(s) | 216, 420 |
| NmuCI | GTSAC | 3 cut(s) | 514, 1438, 2417 |
| NsbI | TGCGCA | 1 cut(s) | 1171 |
| NsiI | ATGCAT | 2 cut(s) | 785, 1738 |
| NspI | RCATGY | 5 cut(s) | 535, 682, 1740, 1851, 1951 |
| NspV | TTCGAA | 1 cut(s) | 1686 |
| PaeI | GCATGC | 1 cut(s) | 1851 |
| PagI | TCATGA | 3 cut(s) | 1255, 2130, 2182 |
| PciI | ACATGT | 2 cut(s) | 531, 1947 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 679 |
| PdmI | GAANNNNTTC | 3 cut(s) | 465, 758, 2089 |
| PfeI | GAWTC | 8 cut(s) | 95, 698, 1075, 1565, 1688, 1986, 2296, 2375 |
| PflFI | GACNNNGTC | 1 cut(s) | 902 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 303 |
| PkrI | GCNGC | 8 cut(s) | 229, 378, 1045, 1888, 1960, 1963, 1981, 2036 |
| PleI | GAGTC | 3 cut(s) | 150, 574, 1484 |
| PmaCI | CACGTG | 1 cut(s) | 604 |
| PmlI | CACGTG | 1 cut(s) | 604 |
| PpsI | GAGTC | 3 cut(s) | 150, 574, 1484 |
| Ppu21I | YACGTR | 1 cut(s) | 604 |
| PpuMI | RGGWCCY | 1 cut(s) | 1721 |
| PscI | ACATGT | 2 cut(s) | 531, 1947 |
| PsiI | TTATAA | 1 cut(s) | 1581 |
| Psp5II | RGGWCCY | 1 cut(s) | 1721 |
| Psp6I | CCWGG | 4 cut(s) | 114, 1224, 1717, 2026 |
| PspCI | CACGTG | 1 cut(s) | 604 |
| PspEI | GGTNACC | 1 cut(s) | 1228 |
| PspGI | CCWGG | 4 cut(s) | 114, 1224, 1717, 2026 |
| PspN4I | GGNNCC | 4 cut(s) | 1812, 1911, 2025, 2255 |
| PspPI | GGNCC | 2 cut(s) | 1218, 1721 |
| PspPPI | RGGWCCY | 1 cut(s) | 1721 |
| PstI | CTGCAG | 1 cut(s) | 1960 |
| PstNI | CAGNNNCTG | 2 cut(s) | 737, 1724 |
| PsuI | RGATCY | 1 cut(s) | 1299 |
| PsyI | GACNNNGTC | 1 cut(s) | 902 |
| PvuII | CAGCTG | 4 cut(s) | 175, 1961, 2037, 2102 |
| RsaI | GTAC | 3 cut(s) | 404, 632, 1857 |
| RsaNI | GTAC | 3 cut(s) | 403, 631, 1856 |
| RseI | CAYNNNNRTG | 2 cut(s) | 474, 864 |
| SalI | GTCGAC | 1 cut(s) | 153 |
| SatI | GCNGC | 8 cut(s) | 228, 377, 1044, 1887, 1959, 1962, 1980, 2035 |
| Sau3AI | GATC | 5 cut(s) | 856, 1006, 1299, 2127, 2139 |
| Sau96I | GGNCC | 2 cut(s) | 1218, 1721 |
| SchI | GAGTC | 3 cut(s) | 150, 574, 1484 |
| ScrFI | CCNGG | 5 cut(s) | 116, 1226, 1719, 2028, 2303 |
| SduI | GDGCHC | 5 cut(s) | 434, 769, 1731, 2256, 2278 |
| SexAI | ACCWGGT | 1 cut(s) | 1717 |
| SfaNI | GCATC | 5 cut(s) | 265, 770, 1421, 1966, 2021 |
| SfcI | CTRYAG | 1 cut(s) | 1956 |
| SfuI | TTCGAA | 1 cut(s) | 1686 |
| SinI | GGWCC | 2 cut(s) | 1218, 1721 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 474, 864 |
| SmlI | CTYRAG | 4 cut(s) | 380, 1175, 1772, 2018 |
| SmoI | CTYRAG | 4 cut(s) | 380, 1175, 1772, 2018 |
| SphI | GCATGC | 1 cut(s) | 1851 |
| SsiI | CCGC | 1 cut(s) | 169 |
| SspMI | CTAG | 4 cut(s) | 720, 1965, 2216, 2270 |
| StyD4I | CCNGG | 5 cut(s) | 114, 1224, 1717, 2026, 2301 |
| TaaI | ACNGT | 8 cut(s) | 616, 758, 1357, 1553, 1825, 2228, 2384, 2411 |
| TaiI | ACGT | 3 cut(s) | 410, 606, 2160 |
| TaqI | TCGA | 8 cut(s) | 154, 159, 180, 331, 989, 1686, 1691, 2121 |
| TatI | WGTACW | 2 cut(s) | 402, 1855 |
| TfiI | GAWTC | 8 cut(s) | 95, 698, 1075, 1565, 1688, 1986, 2296, 2375 |
| TscAI | CASTG | 3 cut(s) | 421, 1053, 2233 |
| TseFI | GTSAC | 3 cut(s) | 514, 1438, 2417 |
| TseI | GCWGC | 8 cut(s) | 227, 376, 1043, 1886, 1958, 1961, 1979, 2034 |
| Tsp45I | GTSAC | 3 cut(s) | 514, 1438, 2417 |
| TspRI | CASTG | 3 cut(s) | 421, 1053, 2233 |
| Tth111I | GACNNNGTC | 1 cut(s) | 902 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 303 |
| Vha464I | CTTAAG | 2 cut(s) | 1772, 2018 |
| VpaK11BI | GGWCC | 2 cut(s) | 1218, 1721 |
| XapI | RAATTY | 8 cut(s) | 8, 28, 121, 1377, 1574, 2013, 2106, 2286 |
| XceI | RCATGY | 5 cut(s) | 535, 682, 1740, 1851, 1951 |
| XmiI | GTMKAC | 1 cut(s) | 154 |
| XmnI | GAANNNNTTC | 3 cut(s) | 465, 758, 2089 |
| XspI | CTAG | 4 cut(s) | 720, 1965, 2216, 2270 |
| Zsp2I | ATGCAT | 2 cut(s) | 785, 1738 |