Rw7G036780

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0016644
Physical Location & Seq
Reverse (-)
55698589 .. 55701022
2434 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G036780.1

Sequence Viewer

Length: 2268 bp
ATGATTATGAACAAATTACACTCAAAGTTTTTTACTTTTCACCACAACATTGTGGATGCAACCCAGTCTAAGTTCGACTCCAATCTACTAATAAAGCGGTTATCCGTTTCTGGTCGAATCGATGATGCCCGCCAAGTGTTCGATGAAATGCCGAGCAGAGACGAACTAACTGAAGCTAAACAAGTCTTTGATGCCACTCCAAGTAAGACTGCCATCACTTGGTCCTCACTCATATCTGGGTACTGTCGAAATGGGTGTCAAAGCGAAGCTTTCGAATCCCAGTACACATTGGGCAGTGTACTGAGGTTGTGTGCTACATTGGGTTTGATCCAAAGAGGTGAAATGGTGCATGGATATATGGTGAAAACCCAGTTTGATAGTAATGTTGATGTAGTTACTGGTTTGGTTGACATGTATGCAAAGTGCAAGCGCGTTTTTGAAGCTGAATGCGTATTTGAGAGTTTGTGGGATAGGAGAAATCATGTCGTGTGGACTGTCATGCTTACCGGGTACTCTCAGAATGGGGATGGCTTGAAGGCATTGAAGTGTTTTCGGGATATGCGAGCACGAGGGGTTGAATCCAATCACCCTTGGTTTTGGGGCTCAGGTGCATGGATGCATTATCAGACTGGTTTTGGGCCTAATGTGTTTGTTCAAAGTGCATTGGTTGACATGTACGTGAAATGTGGAGATCATATCAGTGCAAAGAAGGCACTAAGAAGCATGGAGGTTGACGATGTTGTTTCTTGGAACTCGATGATTGTTGGATGTGTAAGGCAGGGGTTTATACGAGAAGCTTTATCGTTGTTTAGAGAAATGCGTTCAAGAGAAATGAAGATTGATGATTATACATATCCATCAGTTCTGAACTCATTTGCTGCACTGAAGGACGTTAAAAATGCAATGGCGGTTCATTGTCTGATAGTTAAGACTGGATTTGAGGTTTATCAACTTGTAGCCAATGCTCTGGTTGATATGTATGCTAAACAGGGAAATATAGAATCTGCACTTGAGATGTTTAGGCATATTCCAGACAAAGATGTTATCTCTTGGACCTCTCTGGTAACAGGCTATGCACAGAATGGCACTCATGAAAAAGCACTTAAATTATTCTGCGAGATGAGGGATGCAGGGATCTGTCCTGACCAATTTGTCATTGCCAGCATTTTGAGTGCCTGTGCAGAACTGACACTTTTGGAGTTTGGCCAACAAATTCATGCAAATTTCATCAAGTCTGGCCTTCAAGCATCATTATCAGTAGATAATTCCTTTGTAACGATGTATGCAAAGTGTGGGTGTCTAGAAGAGGCTAATAGAGTTTTTGATTCTATGCAAGTTCAAAATGTGATTACTTGGACAGCTTTGATAGTTGGTTATGCCCAGAATGGTAGAGGAAAGGAGTCTCTAAAATTCTACGATCAAATGCTTGCAACTGGCACCCAACCAGACTTCATTACTTTTATTGGCTTGTTATTTGCTTGTAGCCATGCTGGTCTTCAAGAAAAAGGTCAGTACTACTTTGAATCGATGAATAGGGTTTATGGAATAAAACCAGGTCCTGAGCACTATGCATGTATGATTGACCTCTTGGGGCGCTCAGGGAGGCTTAACGAGGCTGAGGCATTAGTTAATCAAATGGCTGTAGAACCTGATGGGACTGTATGGAAGGCACTACTTGCTGCATGTAGAGTACATGGGAAAATAGAGCTGGGAGAGAGGGCTGCAGAGAACCTATTTATATTGGAGCCTATGAATGCTGTGCCTTATGTTCAGTTATCTAACATGTATTCTGCAGCTGGTAGATGGGAAGATGCGGCAAGAATCAGAAGACTGATGAAATCAAAGGGAATTCTTAAGGAGCCTGGATGTAGTTGGATTGAGATGAACGGCCAAGTTCATACCTTTATGTCTGAAGACAGAAGCCATTCATGCACAACTGAAATATATTCAAAAATTGATGAGATCATGATGTTTACAAAGGAAGCTGGATACATGCCAGATATGAATTTTGCACTACATGACATGGATAAAGAGGGGAAGGAGCTTGGCCTAGCATATCACAGCGAGAAGTTGGCCATTGCTTTTGGCCTTCTCACCACACCGCCAGGGGCACCAATTCGAGTTTTTAAGAATCTCCGGGTTTGTGGAGATTGTCATACTGCAATGAAATATATATCACGGGTTTATCTTCGTCATATTATATTGAGGGATTCAAATTGTTTTCATCATTTTAAAGAAGGGAAGTGTTCTTGTGATGACTACTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR

Protein Analysis

755

Amino Acids

85.24

Weight (kDa)

6.46

Isoelectric Point (pI)

40.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 160 - 195 8.9e-07 PPR repeat family
PPR PF01535 162 - 192 6.5e-07 PPR repeat
PPR_2 PF13041 246 - 293 3.9e-12 PPR repeat family
PPR PF01535 248 - 276 1.5e-08 PPR repeat
PPR_2 PF13041 346 - 394 5.1e-10 PPR repeat family
PPR PF01535 349 - 379 7.8e-08 PPR repeat
PPR_2 PF13041 448 - 495 8.9e-09 PPR repeat family
E_motif PF20431 565 - 627 4.9e-20 E motif
DYW_deaminase PF14432 663 - 755 1.9e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016644)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61170
fragaria_vesca FvH4_5g34470
malus_domestica MD07G1126900.v1.1
prunus_persica Prupe.2G157100_v2.0.a1
pyrus_communis pycom07g12240
rosa_chinensis RchiOBHm_Chr7g0235091
rosa_multiflora Rmu_sc0002239.1_g000010
rosa_roxburghii Rroxscaffold_3G00226310
rosa_rugosa Rorug07G0287300 Rorug07G0287400
rosa_samantha Rh7AG442400 Rh7BG415000 Rh7CG463300
rosa_wichuraiana Rw7G036780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1151
AccB1I GGYRCC 2 cut(s) 1436, 2110
AccB7I CCANNNNNTGG 1 cut(s) 219
AccII CGCG 1 cut(s) 432
AciI CCGC 5 cut(s) 97, 130, 908, 1814, 2102
AclWI GGATC 2 cut(s) 322, 1142
AcoI YGGCCR 3 cut(s) 1204, 1888, 2073
AcsI RAATTY 5 cut(s) 1212, 1222, 1409, 1848, 2005
AcuI CTGAAG 3 cut(s) 192, 905, 1932
AfaI GTAC 7 cut(s) 242, 284, 300, 512, 677, 1514, 1692
AfiI CCNNNNNNNGG 1 cut(s) 219
AflII CTTAAG 1 cut(s) 1853
AflIII ACRYGT 3 cut(s) 411, 672, 1782
AjnI CCWGG 3 cut(s) 1552, 1861, 2104
AluBI AGCT 9 cut(s) 176, 269, 443, 797, 1361, 1708, 1796, 1985, 2044
AluI AGCT 9 cut(s) 176, 269, 443, 797, 1361, 1708, 1796, 1985, 2044
Alw21I GWGCWC 2 cut(s) 568, 1566
Alw26I GTCTC 2 cut(s) 153, 1407
AlwI GGATC 2 cut(s) 322, 1142
AlwNI CAGNNNCTG 1 cut(s) 1559
AoxI GGCC 7 cut(s) 638, 1204, 1237, 1888, 2047, 2073, 2086
ApeKI GCWGC 4 cut(s) 878, 1679, 1721, 1793
ApoI RAATTY 5 cut(s) 1212, 1222, 1409, 1848, 2005
ArsI GACNNNNNNTTYG 2 cut(s) 241, 273
Asp700I GAANNNNTTC 1 cut(s) 1924
AspLEI GCGC 2 cut(s) 432, 1596
AspS9I GGNCC 4 cut(s) 222, 638, 1053, 1556
AsuC2I CCSGG 2 cut(s) 508, 2138
AsuHPI GGTGA 5 cut(s) 32, 350, 373, 578, 2086
AsuII TTCGAA 1 cut(s) 273
AvaII GGWCC 3 cut(s) 222, 1053, 1556
BaeGI GKGCMC 1 cut(s) 2113
BalI TGGCCA 2 cut(s) 1206, 2075
BanI GGYRCC 2 cut(s) 1436, 2110
BanII GRGCYC 1 cut(s) 605
BauI CACGAG 1 cut(s) 567
BbsI GAAGAC 3 cut(s) 1487, 1834, 1920
Bbv12I GWGCWC 2 cut(s) 568, 1566
BbvCI CCTCAGC 1 cut(s) 1617
BbvI GCAGC 4 cut(s) 865, 1666, 1708, 1805
BccI CCATC 5 cut(s) 221, 521, 865, 1646, 1797
BceAI ACGGC 1 cut(s) 1903
BciT130I CCWGG 3 cut(s) 1554, 1863, 2106
BciVI GTATCC 1 cut(s) 1982
BcnI CCSGG 2 cut(s) 508, 2138
BcoDI GTCTC 2 cut(s) 153, 1407
BfaI CTAG 2 cut(s) 1301, 2051
BfmI CTRYAG 3 cut(s) 1641, 1722, 1791
BfoI RGCGCY 1 cut(s) 1597
BfrI CTTAAG 1 cut(s) 1853
BfuI GTATCC 1 cut(s) 1982
BisI GCNGC 5 cut(s) 879, 1680, 1722, 1794, 1815
BlsI GCNGC 5 cut(s) 880, 1681, 1723, 1795, 1816
BmcAI AGTACT 1 cut(s) 1514
Bme1390I CCNGG 5 cut(s) 508, 1554, 1863, 2106, 2138
Bme18I GGWCC 3 cut(s) 222, 1053, 1556
BmgT120I GGNCC 4 cut(s) 222, 638, 1053, 1556
BmiI GGNNCC 4 cut(s) 1438, 1746, 1860, 2112
BmrFI CCNGG 5 cut(s) 508, 1554, 1863, 2106, 2138
BmrI ACTGGG 3 cut(s) 58, 274, 364
BmsI GCATC 7 cut(s) 46, 115, 181, 606, 1117, 1256, 1801
BmuI ACTGGG 3 cut(s) 58, 274, 364
BpiI GAAGAC 3 cut(s) 1487, 1834, 1920
Bpu10I CCTNAGC 4 cut(s) 604, 1560, 1597, 1617
Bpu14I TTCGAA 1 cut(s) 273
BpuEI CTTGAG 1 cut(s) 1031
BpuMI CCSGG 2 cut(s) 508, 2138
Bsa29I ATCGAT 2 cut(s) 120, 1526
BsaAI YACGTR 1 cut(s) 679
BsaJI CCNNGG 2 cut(s) 590, 2105
Bsc4I CCNNNNNNNGG 1 cut(s) 219
Bse1I ACTGG 8 cut(s) 64, 280, 370, 403, 634, 937, 1438, 2267
Bse3DI GCAATG 4 cut(s) 909, 1155, 2076, 2169
BseBI CCWGG 3 cut(s) 1554, 1863, 2106
BseCI ATCGAT 2 cut(s) 120, 1526
BseDI CCNNGG 2 cut(s) 590, 2105
BseGI GGATG 6 cut(s) 61, 532, 621, 773, 1132, 1871
BseLI CCNNNNNNNGG 1 cut(s) 219
BseMI GCAATG 4 cut(s) 909, 1155, 2076, 2169
BseMII CTCAG 6 cut(s) 293, 530, 618, 1551, 1608, 1611
BseNI ACTGG 8 cut(s) 64, 280, 370, 403, 634, 937, 1438, 2267
BseSI GKGCMC 1 cut(s) 2113
BseXI GCAGC 4 cut(s) 865, 1666, 1708, 1805
BseYI CCCAGC 1 cut(s) 1708
BsgI GTGCAG 3 cut(s) 864, 990, 1200
Bsh1236I CGCG 1 cut(s) 432
BshFI GGCC 7 cut(s) 640, 1206, 1239, 1890, 2049, 2075, 2088
BshNI GGYRCC 2 cut(s) 1436, 2110
BshVI ATCGAT 2 cut(s) 120, 1526
BsiHKAI GWGCWC 2 cut(s) 568, 1566
BsiSI CCGG 2 cut(s) 507, 2137
BslFI GGGAC 1 cut(s) 1669
BslI CCNNNNNNNGG 1 cut(s) 219
BsmAI GTCTC 2 cut(s) 153, 1407
BsmBI CGTCTC 1 cut(s) 153
BsmFI GGGAC 1 cut(s) 1669
BsmI GAATGC 2 cut(s) 452, 1759
BsnI GGCC 7 cut(s) 640, 1206, 1239, 1890, 2049, 2075, 2088
Bsp119I TTCGAA 1 cut(s) 273
Bsp1286I GDGCHC 4 cut(s) 568, 605, 1566, 2113
Bsp143I GATC 5 cut(s) 327, 691, 1134, 1417, 1962
BspACI CCGC 5 cut(s) 97, 130, 908, 1814, 2102
BspANI GGCC 7 cut(s) 640, 1206, 1239, 1890, 2049, 2075, 2088
BspCNI CTCAG 6 cut(s) 294, 529, 617, 1552, 1609, 1610
BspDI ATCGAT 2 cut(s) 120, 1526
BspFNI CGCG 1 cut(s) 432
BspHI TCATGA 2 cut(s) 1090, 1965
BspLI GGNNCC 4 cut(s) 1438, 1746, 1860, 2112
BspMAI CTGCAG 2 cut(s) 1726, 1795
BspPI GGATC 2 cut(s) 322, 1142
BspT104I TTCGAA 1 cut(s) 273
BspT107I GGYRCC 2 cut(s) 1436, 2110
BspTI CTTAAG 1 cut(s) 1853
BsrDI GCAATG 4 cut(s) 909, 1155, 2076, 2169
BsrI ACTGG 8 cut(s) 64, 280, 370, 403, 634, 937, 1438, 2267
BssECI CCNNGG 2 cut(s) 590, 2105
BssMI GATC 5 cut(s) 327, 691, 1134, 1417, 1962
BssSI CACGAG 1 cut(s) 567
BssT1I CCWWGG 1 cut(s) 590
Bst2BI CACGAG 1 cut(s) 567
Bst2UI CCWGG 3 cut(s) 1554, 1863, 2106
Bst4CI ACNGT 3 cut(s) 245, 496, 1660
Bst6I CTCTTC 1 cut(s) 1299
BstAFI CTTAAG 1 cut(s) 1853
BstAPI GCANNNNNTGC 1 cut(s) 1676
BstBAI YACGTR 1 cut(s) 679
BstBI TTCGAA 1 cut(s) 273
BstC8I GCNNGC 5 cut(s) 130, 428, 564, 1162, 1428
BstDEI CTNAG 8 cut(s) 69, 302, 516, 604, 716, 1560, 1597, 1617
BstF5I GGATG 6 cut(s) 61, 532, 621, 773, 1132, 1871
BstFNI CGCG 1 cut(s) 432
BstH2I RGCGCY 1 cut(s) 1597
BstHHI GCGC 2 cut(s) 432, 1596
BstKTI GATC 5 cut(s) 330, 694, 1137, 1420, 1965
BstMAI GTCTC 2 cut(s) 153, 1407
BstMBI GATC 5 cut(s) 327, 691, 1134, 1417, 1962
BstMWI GCNNNNNNNGC 3 cut(s) 710, 1676, 1929
BstNI CCWGG 3 cut(s) 1554, 1863, 2106
BstNSI RCATGY 6 cut(s) 415, 676, 1575, 1686, 1786, 1996
BstSCI CCNGG 5 cut(s) 506, 1552, 1861, 2104, 2136
BstSFI CTRYAG 3 cut(s) 1641, 1722, 1791
BstSLI GKGCMC 1 cut(s) 2113
BstUI CGCG 1 cut(s) 432
BstV1I GCAGC 4 cut(s) 865, 1666, 1708, 1805
BstV2I GAAGAC 3 cut(s) 1487, 1834, 1920
BstX2I RGATCY 1 cut(s) 1134
BstXI CCANNNNNNTGG 1 cut(s) 967
BstYI RGATCY 1 cut(s) 1134
Bsu15I ATCGAT 2 cut(s) 120, 1526
BsuI GTATCC 1 cut(s) 1982
BsuRI GGCC 7 cut(s) 640, 1206, 1239, 1890, 2049, 2075, 2088
BsuTUI ATCGAT 2 cut(s) 120, 1526
BtsCI GGATG 6 cut(s) 61, 532, 621, 773, 1132, 1871
BtsI GCAGTG 1 cut(s) 301
BtsIMutI CAGTG 3 cut(s) 301, 706, 881
Cac8I GCNNGC 5 cut(s) 130, 428, 564, 1162, 1428
CaiI CAGNNNCTG 1 cut(s) 1559
CciI TCATGA 2 cut(s) 1090, 1965
CfoI GCGC 2 cut(s) 432, 1596
Cfr13I GGNCC 4 cut(s) 222, 638, 1053, 1556
ClaI ATCGAT 2 cut(s) 120, 1526
CsiI ACCWGGT 1 cut(s) 1552
Csp6I GTAC 7 cut(s) 241, 283, 299, 511, 676, 1513, 1691
CviQI GTAC 7 cut(s) 241, 283, 299, 511, 676, 1513, 1691
DdeI CTNAG 8 cut(s) 69, 302, 516, 604, 716, 1560, 1597, 1617
DpnI GATC 5 cut(s) 329, 693, 1136, 1419, 1964
DpnII GATC 5 cut(s) 327, 691, 1134, 1417, 1962
DraI TTTAAA 1 cut(s) 2233
DrdI GACNNNNNNGTC 1 cut(s) 1151
DseDI GACNNNNNNGTC 1 cut(s) 1151
EaeI YGGCCR 3 cut(s) 1204, 1888, 2073
Eam1104I CTCTTC 1 cut(s) 1299
EarI CTCTTC 1 cut(s) 1299
Eco130I CCWWGG 1 cut(s) 590
Eco24I GRGCYC 1 cut(s) 605
Eco47I GGWCC 3 cut(s) 222, 1053, 1556
Eco57I CTGAAG 3 cut(s) 192, 905, 1932
EcoO109I RGGNCCY 1 cut(s) 1556
EcoRI GAATTC 1 cut(s) 1848
EcoRII CCWGG 3 cut(s) 1552, 1861, 2104
EcoT14I CCWWGG 1 cut(s) 590
EcoT22I ATGCAT 2 cut(s) 621, 1573
EcoT38I GRGCYC 1 cut(s) 605
ErhI CCWWGG 1 cut(s) 590
Esp3I CGTCTC 1 cut(s) 153
FalI AAGNNNNNCTT 2 cut(s) 253, 285
FaqI GGGAC 1 cut(s) 1669
FauI CCCGC 1 cut(s) 137
Fnu4HI GCNGC 5 cut(s) 879, 1680, 1722, 1794, 1815
FokI GGATG 6 cut(s) 68, 539, 628, 780, 1139, 1878
FriOI GRGCYC 1 cut(s) 605
Fsp4HI GCNGC 5 cut(s) 879, 1680, 1722, 1794, 1815
FspBI CTAG 2 cut(s) 1301, 2051
GlaI GCGC 2 cut(s) 431, 1595
GluI GCNGC 5 cut(s) 879, 1680, 1722, 1794, 1815
GsaI CCCAGC 1 cut(s) 1712
HaeII RGCGCY 1 cut(s) 1597
HaeIII GGCC 7 cut(s) 640, 1206, 1239, 1890, 2049, 2075, 2088
HapII CCGG 2 cut(s) 507, 2137
HhaI GCGC 2 cut(s) 432, 1596
Hin6I GCGC 2 cut(s) 430, 1594
HinP1I GCGC 2 cut(s) 430, 1594
HincII GTYRAC 3 cut(s) 409, 670, 733
HindII GTYRAC 3 cut(s) 409, 670, 733
HindIII AAGCTT 2 cut(s) 267, 795
HpaII CCGG 2 cut(s) 507, 2137
HphI GGTGA 5 cut(s) 32, 350, 373, 578, 2086
Hpy166II GTNNAC 7 cut(s) 285, 299, 409, 492, 670, 733, 1974
Hpy188I TCNGA 6 cut(s) 519, 627, 867, 921, 1826, 1912
Hpy188III TCNNGA 9 cut(s) 554, 825, 1031, 1091, 1142, 1301, 1499, 1559, 1966
Hpy8I GTNNAC 7 cut(s) 285, 299, 409, 492, 670, 733, 1974
HpyAV CCTTC 8 cut(s) 529, 703, 880, 1250, 1660, 2032, 2099, 2231
HpyCH4III ACNGT 3 cut(s) 245, 496, 1660
HpyCH4IV ACGT 2 cut(s) 678, 891
HpyF10VI GCNNNNNNNGC 3 cut(s) 710, 1676, 1929
HpyF3I CTNAG 8 cut(s) 69, 302, 516, 604, 716, 1560, 1597, 1617
HpySE526I ACGT 2 cut(s) 678, 891
HspAI GCGC 2 cut(s) 430, 1594
Kzo9I GATC 5 cut(s) 327, 691, 1134, 1417, 1962
LmnI GCTCC 3 cut(s) 1744, 1858, 2041
Lsp1109I GCAGC 4 cut(s) 865, 1666, 1708, 1805
LweI GCATC 7 cut(s) 46, 115, 181, 606, 1117, 1256, 1801
MabI ACCWGGT 1 cut(s) 1552
MaeI CTAG 2 cut(s) 1301, 2051
MaeII ACGT 2 cut(s) 678, 891
MaeIII GTNAC 3 cut(s) 394, 1063, 1273
MalI GATC 5 cut(s) 329, 693, 1136, 1419, 1964
MboI GATC 5 cut(s) 327, 691, 1134, 1417, 1962
MboII GAAGA 7 cut(s) 847, 1316, 1487, 1820, 1839, 1925, 2180
MflI RGATCY 1 cut(s) 1134
MhlI GDGCHC 4 cut(s) 568, 605, 1566, 2113
MlsI TGGCCA 2 cut(s) 1206, 2075
MluNI TGGCCA 2 cut(s) 1206, 2075
MlyI GAGTC 2 cut(s) 71, 1409
MmeI TCCRAC 2 cut(s) 745, 1853
Mox20I TGGCCA 2 cut(s) 1206, 2075
Mph1103I ATGCAT 2 cut(s) 621, 1573
MroXI GAANNNNTTC 1 cut(s) 1924
MscI TGGCCA 2 cut(s) 1206, 2075
MseI TTAA 8 cut(s) 894, 927, 1104, 1608, 1629, 1854, 2127, 2232
MslI CAYNNNNRTG 3 cut(s) 544, 677, 699
Msp20I TGGCCA 2 cut(s) 1206, 2075
MspA1I CMGCKG 1 cut(s) 1796
MspCI CTTAAG 1 cut(s) 1853
MspI CCGG 2 cut(s) 507, 2137
MspR9I CCNGG 5 cut(s) 508, 1554, 1863, 2106, 2138
Mva1269I GAATGC 2 cut(s) 452, 1759
MvaI CCWGG 3 cut(s) 1554, 1863, 2106
MvnI CGCG 1 cut(s) 432
MwoI GCNNNNNNNGC 3 cut(s) 710, 1676, 1929
NciI CCSGG 2 cut(s) 508, 2138
NdeII GATC 5 cut(s) 327, 691, 1134, 1417, 1962
NlaIV GGNNCC 4 cut(s) 1438, 1746, 1860, 2112
NmeAIII GCCGAG 1 cut(s) 177
NsiI ATGCAT 2 cut(s) 621, 1573
NspI RCATGY 6 cut(s) 415, 676, 1575, 1686, 1786, 1996
NspV TTCGAA 1 cut(s) 273
PagI TCATGA 2 cut(s) 1090, 1965
PciI ACATGT 3 cut(s) 411, 672, 1782
PcsI WCGNNNNNNNCGW 1 cut(s) 559
PctI GAATGC 2 cut(s) 452, 1759
PdmI GAANNNNTTC 1 cut(s) 1924
PfeI GAWTC 9 cut(s) 117, 275, 578, 1001, 1325, 1523, 1821, 2131, 2210
PflMI CCANNNNNTGG 1 cut(s) 219
PkrI GCNGC 5 cut(s) 880, 1681, 1723, 1795, 1816
PleI GAGTC 2 cut(s) 71, 1408
PpsI GAGTC 2 cut(s) 71, 1408
Ppu21I YACGTR 1 cut(s) 679
PpuMI RGGWCCY 1 cut(s) 1556
PscI ACATGT 3 cut(s) 411, 672, 1782
Psp5II RGGWCCY 1 cut(s) 1556
Psp6I CCWGG 3 cut(s) 1552, 1861, 2104
PspFI CCCAGC 1 cut(s) 1708
PspGI CCWGG 3 cut(s) 1552, 1861, 2104
PspN4I GGNNCC 4 cut(s) 1438, 1746, 1860, 2112
PspPI GGNCC 4 cut(s) 222, 638, 1053, 1556
PspPPI RGGWCCY 1 cut(s) 1556
PstI CTGCAG 2 cut(s) 1726, 1795
PstNI CAGNNNCTG 1 cut(s) 1559
PsuI RGATCY 1 cut(s) 1134
PvuII CAGCTG 1 cut(s) 1796
RsaI GTAC 7 cut(s) 242, 284, 300, 512, 677, 1514, 1692
RsaNI GTAC 7 cut(s) 241, 283, 299, 511, 676, 1513, 1691
RseI CAYNNNNRTG 3 cut(s) 544, 677, 699
SaqAI TTAA 8 cut(s) 894, 927, 1104, 1608, 1629, 1854, 2127, 2232
SatI GCNGC 5 cut(s) 879, 1680, 1722, 1794, 1815
Sau3AI GATC 5 cut(s) 327, 691, 1134, 1417, 1962
Sau96I GGNCC 4 cut(s) 222, 638, 1053, 1556
ScaI AGTACT 1 cut(s) 1514
SchI GAGTC 2 cut(s) 71, 1409
ScrFI CCNGG 5 cut(s) 508, 1554, 1863, 2106, 2138
SduI GDGCHC 4 cut(s) 568, 605, 1566, 2113
SexAI ACCWGGT 1 cut(s) 1552
SfaNI GCATC 7 cut(s) 46, 115, 181, 606, 1117, 1256, 1801
SfcI CTRYAG 3 cut(s) 1641, 1722, 1791
SfuI TTCGAA 1 cut(s) 273
SinI GGWCC 3 cut(s) 222, 1053, 1556
SmiMI CAYNNNNRTG 3 cut(s) 544, 677, 699
SmlI CTYRAG 2 cut(s) 1010, 1853
SmoI CTYRAG 2 cut(s) 1010, 1853
SsiI CCGC 5 cut(s) 97, 130, 908, 1814, 2102
SspMI CTAG 2 cut(s) 1301, 2051
StyD4I CCNGG 5 cut(s) 506, 1552, 1861, 2104, 2136
StyI CCWWGG 1 cut(s) 590
TaaI ACNGT 3 cut(s) 245, 496, 1660
TaiI ACGT 2 cut(s) 681, 894
TaqI TCGA 9 cut(s) 75, 115, 120, 141, 247, 273, 755, 1526, 2119
TatI WGTACW 4 cut(s) 282, 298, 1512, 1690
TauI GCSGC 1 cut(s) 1817
TfiI GAWTC 9 cut(s) 117, 275, 578, 1001, 1325, 1523, 1821, 2131, 2210
Tru1I TTAA 8 cut(s) 894, 927, 1104, 1608, 1629, 1854, 2127, 2232
Tru9I TTAA 8 cut(s) 894, 927, 1104, 1608, 1629, 1854, 2127, 2232
TscAI CASTG 3 cut(s) 301, 706, 888
TseI GCWGC 4 cut(s) 878, 1679, 1721, 1793
TspGWI ACGGA 1 cut(s) 94
TspRI CASTG 3 cut(s) 301, 706, 888
Van91I CCANNNNNTGG 1 cut(s) 219
Vha464I CTTAAG 1 cut(s) 1853
VpaK11BI GGWCC 3 cut(s) 222, 1053, 1556
XapI RAATTY 5 cut(s) 1212, 1222, 1409, 1848, 2005
XbaI TCTAGA 1 cut(s) 1300
XceI RCATGY 6 cut(s) 415, 676, 1575, 1686, 1786, 1996
XmnI GAANNNNTTC 1 cut(s) 1924
XspI CTAG 2 cut(s) 1301, 2051
ZrmI AGTACT 1 cut(s) 1514
Zsp2I ATGCAT 2 cut(s) 621, 1573
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.