Rh7AG442400

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0016644
Physical Location & Seq
Reverse (-)
60063452 .. 60065890
2439 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG442400.1

Sequence Viewer

Length: 2439 bp
ATGATTATGAACAAATTACACTCAAAGTTTTTTACTTTTCACCACAATGCTTATCAGTTAGAGCAACGAGTCTCAACCCATTTCATCCATAGCATTGTGGATGCAACCCAGTCTAAGTTCGACTCCAATCTACTACTAAAGCGGTTATCTGTTTCTGGTCGAATCGATGATGCCCGCCAAGTGTTCGATGAAATGCCGAGCAGAGATGAGTTCACTTGGAATACTATGATAGCTGCTTATGCCAATTCAGGACGACTAACCGAAGCTAAACAAGTCTTTGATGCCACCCCAAGTAAGACTGCCATTACTTGGTCCTCACTCATATCTGGGTATTGTCGAAATGGGTGTCAAAGCGAAGCTTTTGAATCGTTTTGGCAAATGCAGCTTGGGGGTGAAAGGCCGAGCCAGTACACATTGGGCAGTGTACTGAGGTTGTGTGCAACAATGGGTTTGATCCAAAGAGGTGAAATGGTGCATGGATATATGGTGAAAACCCAGTTTGATAGTAATGTTGATGTAGTTACTGGTTTGGTTGACATGTATGCAAAGTGCAAGCGTGTTTTTGAAGCCGAATGTGTATTTGAGAGTTTGCGGGATAGGAAAAATCATGTGGTGTGGACTGTCATGCTTACCGGGTACTCTCAGAATGGGGATGGCTTGAAGGCAGTGAAGTGTTTTCGAGACATGCGAGCACAAGGGGTTGAATCCAATCAGTTCACATTTCCTAGCATATTGACTGCTGCTGCGTCGGTTTTAGCCCTTGGTTTTGGGGCTCAGGTGCATGGATGCATTATTCAGACTGGTTTTGGGCCTAATGTGTTTGTTCAAAGTGCATTGGTTGACATGTACGTGAAATGTGGAGATCATATCAGTGCAAAGAAGGCACTAAGAAGCATGGAGGTTGACGATGTTGTTTCTTGGAACTCGATGATTGTTGGATGTGTAAGGCAGGGGTTTATACAAGAAGCTTTATCGTTGTTTAGAGAAATGCGTTCAAGAGAAATGAAGATTGATGATTATACATATCCATCAGTTCTGAACTCATTTGCTGCACTGAAGGACGTTAAAAATGCAATGGCGGTTCATTGTCTGATAGTTAAGACTGGATTTGAGGTTTATCAACTTGTAGCCAATGCTCTGGTTGATATGTATGCTAAACAGGGAAATATAGAATCTGCACTTGAGATGTTTAGGCATATTCCAGACAAAGATGTTATCTCTTGGACCTCTCTGGTAACAGGCTATGCACAGAATGGCACTCATGAAAAAGCACTTAAATTATTCTGCGAGATGAGGGGTGCAGGGATCTGTCCTGACCAATTTGTCATTGCCAGCATTTTGAGTGCCTGTGCAGAACTGACACTTTTGGAGTTTGGCCAACAAATTCATGCAAATTTCATCAAGTCTGGCCTTCAAGCATCATTATCAGTAGATAATTCCTTTGTAACGATGTATGCAAAGTGTGGGTGTCTAGAAGAGGCTAATAGAGTTTTTGATTCTATGCAAGTTCAAAATGTGATTACTTGGACAGCTTTGATAGTTGGTTATGCCCAGAATGGTAGAGGAAAGGAGTCTCTAAAATTCTACGATCAAATGCTTGCAACTGGCACCCAACCAGATTTCATTACTTTTATTGGCTTGTTATTTGCTTGTAGCCATGCTGGTCTTCAAGAAAAAGGTCAGTACTACTTTGAATCGATGAATAGGGTTTATGGAATAAAACCAGGTCCTGAGCACTATGCATGTATGATTGACCTCTTGGGGCGCTCAGGGAGGCTTAACGAGGCTGAGGCATTAGTTAATCAAATGGCTGTAGAACCTGATGGGACTGTATGGAAGGCACTACTTGCTGCATGTAGAGTACATGGGAAAATAGAGCTGGGAGAGAGGGCTGCAGAGAACCTATTTATATTGGAGCCTATGAATGCTGTGCCTTATGTTCAGTTATCTAACATGTATTCTGCAGCTGGTAGATGGGAAGATGCGGCAAGAATCAGAAGACTGATGAAATCAAAGGGAATTCTTAAGGAGCCTGGATGTAGTTGGATAGAGATGAACGGCCAAGTTCATACCTTTATGTCTGAAGACAGAAGCCATTCATGCACAACTGAAATATATTCAAAAATTGATGAGATCATGATGTTTACAAAGGAAGCTGGATACATGCCAGATATGAATTTTGCACTACATGACATGGATAAAGAGGGGAAGGAGCTTGGCCTAGCATATCACAGCGAGAAGTTGGCCATTGCTTTTGGCCTTCTCACCACACCGCCAGGGGCACCAATTCGAGTTTTTAAGAATCTCCGGGTTTGTGGAGATTGTCATACTGCAATGAAATATATATCACGGGTTTATCTTCGTCATATTATATTGAGGGATTCAAATTGTTTTCATCATTTTAAAGAAGGGAAGTGTTCTTGTGATGACTACTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR

Protein Analysis

812

Amino Acids

91.15

Weight (kDa)

6.57

Isoelectric Point (pI)

36.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 100 - 147 2.8e-06 PPR repeat family
PPR_2 PF13041 202 - 247 4.3e-09 PPR repeat family
PPR PF01535 204 - 234 3.7e-06 PPR repeat
PPR_2 PF13041 303 - 350 4.1e-12 PPR repeat family
PPR PF01535 305 - 333 2e-08 PPR repeat
PPR_2 PF13041 403 - 451 2.6e-09 PPR repeat family
PPR PF01535 406 - 436 1.3e-07 PPR repeat
PPR_2 PF13041 505 - 552 9.7e-09 PPR repeat family
E_motif PF20431 622 - 684 5.4e-20 E motif
DYW_deaminase PF14432 720 - 812 2.1e-40 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016644)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G61170
fragaria_vesca FvH4_5g34470
malus_domestica MD07G1126900.v1.1
prunus_persica Prupe.2G157100_v2.0.a1
pyrus_communis pycom07g12240
rosa_chinensis RchiOBHm_Chr7g0235091
rosa_multiflora Rmu_sc0002239.1_g000010
rosa_roxburghii Rroxscaffold_3G00226310
rosa_rugosa Rorug07G0287300 Rorug07G0287400
rosa_samantha Rh7AG442400 Rh7BG415000 Rh7CG463300
rosa_wichuraiana Rw7G036780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1322
AccB1I GGYRCC 2 cut(s) 1607, 2281
AccB7I CCANNNNNTGG 1 cut(s) 309
AciI CCGC 6 cut(s) 142, 175, 592, 1079, 1985, 2273
AclWI GGATC 2 cut(s) 448, 1313
AcoI YGGCCR 3 cut(s) 1375, 2059, 2244
AcsI RAATTY 5 cut(s) 1383, 1393, 1580, 2019, 2176
AcuI CTGAAG 2 cut(s) 1076, 2103
AfaI GTAC 6 cut(s) 410, 426, 638, 848, 1685, 1863
AfiI CCNNNNNNNGG 1 cut(s) 309
AflII CTTAAG 1 cut(s) 2024
AflIII ACRYGT 3 cut(s) 537, 843, 1953
AjnI CCWGG 3 cut(s) 1723, 2032, 2275
Alw21I GWGCWC 2 cut(s) 694, 1737
Alw26I GTCTC 3 cut(s) 76, 675, 1578
AlwI GGATC 2 cut(s) 448, 1313
AlwNI CAGNNNCTG 1 cut(s) 1730
AoxI GGCC 8 cut(s) 398, 809, 1375, 1408, 2059, 2218, 2244, 2257
ApeKI GCWGC 8 cut(s) 233, 382, 740, 743, 1049, 1850, 1892, 1964
ApoI RAATTY 5 cut(s) 1383, 1393, 1580, 2019, 2176
ArsI GACNNNNNNTTYG 2 cut(s) 331, 363
Asp700I GAANNNNTTC 1 cut(s) 2095
AspLEI GCGC 1 cut(s) 1767
AspS9I GGNCC 4 cut(s) 312, 809, 1224, 1727
AsuC2I CCSGG 2 cut(s) 634, 2309
AsuHPI GGTGA 5 cut(s) 32, 404, 476, 499, 2257
AvaII GGWCC 3 cut(s) 312, 1224, 1727
BaeGI GKGCMC 1 cut(s) 2284
BalI TGGCCA 2 cut(s) 1377, 2246
BanI GGYRCC 2 cut(s) 1607, 2281
BanII GRGCYC 1 cut(s) 775
BbsI GAAGAC 3 cut(s) 1658, 2005, 2091
Bbv12I GWGCWC 2 cut(s) 694, 1737
BbvCI CCTCAGC 1 cut(s) 1788
BbvI GCAGC 8 cut(s) 220, 394, 727, 730, 1036, 1837, 1879, 1976
BccI CCATC 4 cut(s) 647, 1036, 1817, 1968
BceAI ACGGC 1 cut(s) 2074
BciT130I CCWGG 3 cut(s) 1725, 2034, 2277
BciVI GTATCC 1 cut(s) 2153
BcnI CCSGG 2 cut(s) 634, 2309
BcoDI GTCTC 3 cut(s) 76, 675, 1578
BfaI CTAG 3 cut(s) 726, 1472, 2222
BfmI CTRYAG 3 cut(s) 1812, 1893, 1962
BfoI RGCGCY 1 cut(s) 1768
BfrI CTTAAG 1 cut(s) 2024
BfuI GTATCC 1 cut(s) 2153
BisI GCNGC 9 cut(s) 234, 383, 741, 744, 1050, 1851, 1893, 1965, 1986
BlsI GCNGC 9 cut(s) 235, 384, 742, 745, 1051, 1852, 1894, 1966, 1987
BmcAI AGTACT 1 cut(s) 1685
Bme1390I CCNGG 5 cut(s) 634, 1725, 2034, 2277, 2309
Bme18I GGWCC 3 cut(s) 312, 1224, 1727
BmgT120I GGNCC 4 cut(s) 312, 809, 1224, 1727
BmiI GGNNCC 4 cut(s) 1609, 1917, 2031, 2283
BmrFI CCNGG 5 cut(s) 634, 1725, 2034, 2277, 2309
BmrI ACTGGG 2 cut(s) 103, 490
BmsI GCATC 6 cut(s) 91, 160, 271, 776, 1427, 1972
BmuI ACTGGG 2 cut(s) 103, 490
BpiI GAAGAC 3 cut(s) 1658, 2005, 2091
Bpu10I CCTNAGC 4 cut(s) 774, 1731, 1768, 1788
BpuEI CTTGAG 1 cut(s) 1202
BpuMI CCSGG 2 cut(s) 634, 2309
Bsa29I ATCGAT 2 cut(s) 165, 1697
BsaAI YACGTR 1 cut(s) 850
BsaJI CCNNGG 2 cut(s) 760, 2276
Bsc4I CCNNNNNNNGG 1 cut(s) 309
Bse1I ACTGG 8 cut(s) 109, 406, 496, 529, 805, 1108, 1609, 2438
Bse3DI GCAATG 4 cut(s) 1080, 1326, 2247, 2340
BseBI CCWGG 3 cut(s) 1725, 2034, 2277
BseCI ATCGAT 2 cut(s) 165, 1697
BseDI CCNNGG 2 cut(s) 760, 2276
BseGI GGATG 6 cut(s) 84, 106, 658, 791, 944, 2042
BseLI CCNNNNNNNGG 1 cut(s) 309
BseMI GCAATG 4 cut(s) 1080, 1326, 2247, 2340
BseMII CTCAG 6 cut(s) 419, 656, 788, 1722, 1779, 1782
BseNI ACTGG 8 cut(s) 109, 406, 496, 529, 805, 1108, 1609, 2438
BseSI GKGCMC 1 cut(s) 2284
BseXI GCAGC 8 cut(s) 220, 394, 727, 730, 1036, 1837, 1879, 1976
BseYI CCCAGC 1 cut(s) 1879
BsgI GTGCAG 4 cut(s) 1035, 1161, 1320, 1371
BshFI GGCC 8 cut(s) 400, 811, 1377, 1410, 2061, 2220, 2246, 2259
BshNI GGYRCC 2 cut(s) 1607, 2281
BshVI ATCGAT 2 cut(s) 165, 1697
BsiHKAI GWGCWC 2 cut(s) 694, 1737
BsiSI CCGG 2 cut(s) 633, 2308
BslFI GGGAC 1 cut(s) 1840
BslI CCNNNNNNNGG 1 cut(s) 309
BsmAI GTCTC 3 cut(s) 76, 675, 1578
BsmFI GGGAC 1 cut(s) 1840
BsmI GAATGC 1 cut(s) 1930
BsnI GGCC 8 cut(s) 400, 811, 1377, 1410, 2061, 2220, 2246, 2259
Bsp1286I GDGCHC 4 cut(s) 694, 775, 1737, 2284
Bsp143I GATC 5 cut(s) 453, 862, 1305, 1588, 2133
BspACI CCGC 6 cut(s) 142, 175, 592, 1079, 1985, 2273
BspANI GGCC 8 cut(s) 400, 811, 1377, 1410, 2061, 2220, 2246, 2259
BspCNI CTCAG 6 cut(s) 420, 655, 787, 1723, 1780, 1781
BspDI ATCGAT 2 cut(s) 165, 1697
BspHI TCATGA 2 cut(s) 1261, 2136
BspLI GGNNCC 4 cut(s) 1609, 1917, 2031, 2283
BspMAI CTGCAG 2 cut(s) 1897, 1966
BspPI GGATC 2 cut(s) 448, 1313
BspT107I GGYRCC 2 cut(s) 1607, 2281
BspTI CTTAAG 1 cut(s) 2024
BsrDI GCAATG 4 cut(s) 1080, 1326, 2247, 2340
BsrI ACTGG 8 cut(s) 109, 406, 496, 529, 805, 1108, 1609, 2438
BssECI CCNNGG 2 cut(s) 760, 2276
BssMI GATC 5 cut(s) 453, 862, 1305, 1588, 2133
BssT1I CCWWGG 1 cut(s) 760
Bst2UI CCWGG 3 cut(s) 1725, 2034, 2277
Bst4CI ACNGT 2 cut(s) 622, 1831
Bst6I CTCTTC 1 cut(s) 1470
BstAFI CTTAAG 1 cut(s) 2024
BstAPI GCANNNNNTGC 1 cut(s) 1847
BstBAI YACGTR 1 cut(s) 850
BstC8I GCNNGC 5 cut(s) 175, 554, 690, 1333, 1599
BstDEI CTNAG 8 cut(s) 114, 428, 642, 774, 887, 1731, 1768, 1788
BstF5I GGATG 6 cut(s) 84, 106, 658, 791, 944, 2042
BstH2I RGCGCY 1 cut(s) 1768
BstHHI GCGC 1 cut(s) 1767
BstKTI GATC 5 cut(s) 456, 865, 1308, 1591, 2136
BstMAI GTCTC 3 cut(s) 76, 675, 1578
BstMBI GATC 5 cut(s) 453, 862, 1305, 1588, 2133
BstMWI GCNNNNNNNGC 5 cut(s) 239, 382, 881, 1847, 2100
BstNI CCWGG 3 cut(s) 1725, 2034, 2277
BstNSI RCATGY 7 cut(s) 541, 688, 847, 1746, 1857, 1957, 2167
BstSCI CCNGG 5 cut(s) 632, 1723, 2032, 2275, 2307
BstSFI CTRYAG 3 cut(s) 1812, 1893, 1962
BstSLI GKGCMC 1 cut(s) 2284
BstV1I GCAGC 8 cut(s) 220, 394, 727, 730, 1036, 1837, 1879, 1976
BstV2I GAAGAC 3 cut(s) 1658, 2005, 2091
BstX2I RGATCY 1 cut(s) 1305
BstXI CCANNNNNNTGG 1 cut(s) 1138
BstYI RGATCY 1 cut(s) 1305
Bsu15I ATCGAT 2 cut(s) 165, 1697
BsuI GTATCC 1 cut(s) 2153
BsuRI GGCC 8 cut(s) 400, 811, 1377, 1410, 2061, 2220, 2246, 2259
BsuTUI ATCGAT 2 cut(s) 165, 1697
BtsCI GGATG 6 cut(s) 84, 106, 658, 791, 944, 2042
BtsI GCAGTG 2 cut(s) 427, 672
BtsIMutI CAGTG 4 cut(s) 427, 672, 877, 1052
Cac8I GCNNGC 5 cut(s) 175, 554, 690, 1333, 1599
CaiI CAGNNNCTG 1 cut(s) 1730
CciI TCATGA 2 cut(s) 1261, 2136
CfoI GCGC 1 cut(s) 1767
Cfr13I GGNCC 4 cut(s) 312, 809, 1224, 1727
ClaI ATCGAT 2 cut(s) 165, 1697
CseI GACGC 1 cut(s) 735
CsiI ACCWGGT 1 cut(s) 1723
Csp6I GTAC 6 cut(s) 409, 425, 637, 847, 1684, 1862
CviQI GTAC 6 cut(s) 409, 425, 637, 847, 1684, 1862
DdeI CTNAG 8 cut(s) 114, 428, 642, 774, 887, 1731, 1768, 1788
DpnI GATC 5 cut(s) 455, 864, 1307, 1590, 2135
DpnII GATC 5 cut(s) 453, 862, 1305, 1588, 2133
DraI TTTAAA 1 cut(s) 2404
DrdI GACNNNNNNGTC 1 cut(s) 1322
DseDI GACNNNNNNGTC 1 cut(s) 1322
EaeI YGGCCR 3 cut(s) 1375, 2059, 2244
Eam1104I CTCTTC 1 cut(s) 1470
EarI CTCTTC 1 cut(s) 1470
Eco130I CCWWGG 1 cut(s) 760
Eco24I GRGCYC 1 cut(s) 775
Eco47I GGWCC 3 cut(s) 312, 1224, 1727
Eco57I CTGAAG 2 cut(s) 1076, 2103
EcoO109I RGGNCCY 1 cut(s) 1727
EcoRI GAATTC 1 cut(s) 2019
EcoRII CCWGG 3 cut(s) 1723, 2032, 2275
EcoT14I CCWWGG 1 cut(s) 760
EcoT22I ATGCAT 2 cut(s) 791, 1744
EcoT38I GRGCYC 1 cut(s) 775
ErhI CCWWGG 1 cut(s) 760
FalI AAGNNNNNCTT 2 cut(s) 343, 375
FaqI GGGAC 1 cut(s) 1840
FauI CCCGC 2 cut(s) 182, 585
Fnu4HI GCNGC 9 cut(s) 234, 383, 741, 744, 1050, 1851, 1893, 1965, 1986
FokI GGATG 6 cut(s) 71, 113, 665, 798, 951, 2049
FriOI GRGCYC 1 cut(s) 775
Fsp4HI GCNGC 9 cut(s) 234, 383, 741, 744, 1050, 1851, 1893, 1965, 1986
FspBI CTAG 3 cut(s) 726, 1472, 2222
GlaI GCGC 1 cut(s) 1766
GluI GCNGC 9 cut(s) 234, 383, 741, 744, 1050, 1851, 1893, 1965, 1986
GsaI CCCAGC 1 cut(s) 1883
HaeII RGCGCY 1 cut(s) 1768
HaeIII GGCC 8 cut(s) 400, 811, 1377, 1410, 2061, 2220, 2246, 2259
HapII CCGG 2 cut(s) 633, 2308
HgaI GACGC 1 cut(s) 735
HhaI GCGC 1 cut(s) 1767
Hin6I GCGC 1 cut(s) 1765
HinP1I GCGC 1 cut(s) 1765
HincII GTYRAC 3 cut(s) 535, 841, 904
HindII GTYRAC 3 cut(s) 535, 841, 904
HindIII AAGCTT 2 cut(s) 357, 966
HpaII CCGG 2 cut(s) 633, 2308
HphI GGTGA 5 cut(s) 32, 404, 476, 499, 2257
Hpy166II GTNNAC 9 cut(s) 213, 411, 425, 535, 618, 717, 841, 904, 2145
Hpy188I TCNGA 6 cut(s) 645, 798, 1038, 1092, 1997, 2083
Hpy8I GTNNAC 9 cut(s) 213, 411, 425, 535, 618, 717, 841, 904, 2145
Hpy99I CGWCG 1 cut(s) 751
HpyAV CCTTC 8 cut(s) 655, 874, 1051, 1421, 1831, 2203, 2270, 2402
HpyCH4III ACNGT 2 cut(s) 622, 1831
HpyCH4IV ACGT 2 cut(s) 849, 1062
HpyF10VI GCNNNNNNNGC 5 cut(s) 239, 382, 881, 1847, 2100
HpyF3I CTNAG 8 cut(s) 114, 428, 642, 774, 887, 1731, 1768, 1788
HpySE526I ACGT 2 cut(s) 849, 1062
HspAI GCGC 1 cut(s) 1765
Kzo9I GATC 5 cut(s) 453, 862, 1305, 1588, 2133
LmnI GCTCC 3 cut(s) 1915, 2029, 2212
Lsp1109I GCAGC 8 cut(s) 220, 394, 727, 730, 1036, 1837, 1879, 1976
LweI GCATC 6 cut(s) 91, 160, 271, 776, 1427, 1972
MabI ACCWGGT 1 cut(s) 1723
MaeI CTAG 3 cut(s) 726, 1472, 2222
MaeII ACGT 2 cut(s) 849, 1062
MaeIII GTNAC 3 cut(s) 520, 1234, 1444
MalI GATC 5 cut(s) 455, 864, 1307, 1590, 2135
MboI GATC 5 cut(s) 453, 862, 1305, 1588, 2133
MboII GAAGA 7 cut(s) 1018, 1487, 1658, 1991, 2010, 2096, 2351
MflI RGATCY 1 cut(s) 1305
MhlI GDGCHC 4 cut(s) 694, 775, 1737, 2284
MlsI TGGCCA 2 cut(s) 1377, 2246
MluNI TGGCCA 2 cut(s) 1377, 2246
MlyI GAGTC 3 cut(s) 78, 116, 1580
MmeI TCCRAC 2 cut(s) 916, 2024
Mox20I TGGCCA 2 cut(s) 1377, 2246
Mph1103I ATGCAT 2 cut(s) 791, 1744
MroXI GAANNNNTTC 1 cut(s) 2095
MscI TGGCCA 2 cut(s) 1377, 2246
MseI TTAA 8 cut(s) 1065, 1098, 1275, 1779, 1800, 2025, 2298, 2403
MslI CAYNNNNRTG 3 cut(s) 45, 848, 870
Msp20I TGGCCA 2 cut(s) 1377, 2246
MspA1I CMGCKG 1 cut(s) 1967
MspCI CTTAAG 1 cut(s) 2024
MspI CCGG 2 cut(s) 633, 2308
MspR9I CCNGG 5 cut(s) 634, 1725, 2034, 2277, 2309
Mva1269I GAATGC 1 cut(s) 1930
MvaI CCWGG 3 cut(s) 1725, 2034, 2277
MwoI GCNNNNNNNGC 5 cut(s) 239, 382, 881, 1847, 2100
NciI CCSGG 2 cut(s) 634, 2309
NdeII GATC 5 cut(s) 453, 862, 1305, 1588, 2133
NlaIV GGNNCC 4 cut(s) 1609, 1917, 2031, 2283
NmeAIII GCCGAG 2 cut(s) 222, 426
NsiI ATGCAT 2 cut(s) 791, 1744
NspI RCATGY 7 cut(s) 541, 688, 847, 1746, 1857, 1957, 2167
PagI TCATGA 2 cut(s) 1261, 2136
PciI ACATGT 3 cut(s) 537, 843, 1953
PcsI WCGNNNNNNNCGW 1 cut(s) 685
PctI GAATGC 1 cut(s) 1930
PdmI GAANNNNTTC 1 cut(s) 2095
PfeI GAWTC 9 cut(s) 162, 365, 704, 1172, 1496, 1694, 1992, 2302, 2381
PflMI CCANNNNNTGG 1 cut(s) 309
PkrI GCNGC 9 cut(s) 235, 384, 742, 745, 1051, 1852, 1894, 1966, 1987
PleI GAGTC 3 cut(s) 77, 116, 1579
PpsI GAGTC 3 cut(s) 77, 116, 1579
Ppu21I YACGTR 1 cut(s) 850
PpuMI RGGWCCY 1 cut(s) 1727
PscI ACATGT 3 cut(s) 537, 843, 1953
Psp5II RGGWCCY 1 cut(s) 1727
Psp6I CCWGG 3 cut(s) 1723, 2032, 2275
PspFI CCCAGC 1 cut(s) 1879
PspGI CCWGG 3 cut(s) 1723, 2032, 2275
PspN4I GGNNCC 4 cut(s) 1609, 1917, 2031, 2283
PspPI GGNCC 4 cut(s) 312, 809, 1224, 1727
PspPPI RGGWCCY 1 cut(s) 1727
PstI CTGCAG 2 cut(s) 1897, 1966
PstNI CAGNNNCTG 1 cut(s) 1730
PsuI RGATCY 1 cut(s) 1305
PvuII CAGCTG 1 cut(s) 1967
RsaI GTAC 6 cut(s) 410, 426, 638, 848, 1685, 1863
RsaNI GTAC 6 cut(s) 409, 425, 637, 847, 1684, 1862
RseI CAYNNNNRTG 3 cut(s) 45, 848, 870
SaqAI TTAA 8 cut(s) 1065, 1098, 1275, 1779, 1800, 2025, 2298, 2403
SatI GCNGC 9 cut(s) 234, 383, 741, 744, 1050, 1851, 1893, 1965, 1986
Sau3AI GATC 5 cut(s) 453, 862, 1305, 1588, 2133
Sau96I GGNCC 4 cut(s) 312, 809, 1224, 1727
ScaI AGTACT 1 cut(s) 1685
SchI GAGTC 3 cut(s) 78, 116, 1580
ScrFI CCNGG 5 cut(s) 634, 1725, 2034, 2277, 2309
SduI GDGCHC 4 cut(s) 694, 775, 1737, 2284
SexAI ACCWGGT 1 cut(s) 1723
SfaNI GCATC 6 cut(s) 91, 160, 271, 776, 1427, 1972
SfcI CTRYAG 3 cut(s) 1812, 1893, 1962
SinI GGWCC 3 cut(s) 312, 1224, 1727
SmiMI CAYNNNNRTG 3 cut(s) 45, 848, 870
SmlI CTYRAG 2 cut(s) 1181, 2024
SmoI CTYRAG 2 cut(s) 1181, 2024
SsiI CCGC 6 cut(s) 142, 175, 592, 1079, 1985, 2273
SspMI CTAG 3 cut(s) 726, 1472, 2222
StyD4I CCNGG 5 cut(s) 632, 1723, 2032, 2275, 2307
StyI CCWWGG 1 cut(s) 760
TaaI ACNGT 2 cut(s) 622, 1831
TaiI ACGT 2 cut(s) 852, 1065
TaqI TCGA 9 cut(s) 120, 160, 165, 186, 337, 679, 926, 1697, 2290
TatI WGTACW 4 cut(s) 408, 424, 1683, 1861
TauI GCSGC 1 cut(s) 1988
TfiI GAWTC 9 cut(s) 162, 365, 704, 1172, 1496, 1694, 1992, 2302, 2381
Tru1I TTAA 8 cut(s) 1065, 1098, 1275, 1779, 1800, 2025, 2298, 2403
Tru9I TTAA 8 cut(s) 1065, 1098, 1275, 1779, 1800, 2025, 2298, 2403
TscAI CASTG 4 cut(s) 427, 672, 877, 1059
TseI GCWGC 8 cut(s) 233, 382, 740, 743, 1049, 1850, 1892, 1964
TspRI CASTG 4 cut(s) 427, 672, 877, 1059
Van91I CCANNNNNTGG 1 cut(s) 309
Vha464I CTTAAG 1 cut(s) 2024
VpaK11BI GGWCC 3 cut(s) 312, 1224, 1727
XapI RAATTY 5 cut(s) 1383, 1393, 1580, 2019, 2176
XbaI TCTAGA 1 cut(s) 1471
XceI RCATGY 7 cut(s) 541, 688, 847, 1746, 1857, 1957, 2167
XmnI GAANNNNTTC 1 cut(s) 2095
XspI CTAG 3 cut(s) 726, 1472, 2222
ZrmI AGTACT 1 cut(s) 1685
Zsp2I ATGCAT 2 cut(s) 791, 1744
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.