Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0004904

Physical Location & Seq

Genomic Coordinates Forward (+)

21440702 .. 21442417

Gene Structure 1716 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G164700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1035 bp

ATGTTTACGTTATGGGGCATTTTGCAGCTTTTAAGGGTGTATCCCGGTAGATTGCCTGACTTGGAACTCATGTTTAACTGTGGTGATCAGCCCGTCATCCCATCAAAGGACTTTAGGGGCCCGAATGCTAGCCCACCACCGTTGTTTCGATACTGCTCGGATGAGGGGAGCTTGGATATTGTGTTCCCAGATTGGTCTTTTTGGGGCTGGGTTGAGACCAATATAAAACCATGGAGAAGTCTATTGCAAAGCATAAAAGAAGGCAATAAAAGAACAAAGTGGGAAGACAGGGTGCCCTATGCTTACTGGAAAGGTAACTCAAATGTGGCTCGAACCAGAATAGACCTTCTCAAATGCAATGTCTCAGACAAAAATGACTGGAACACACGCCTATATATTCAGAATTGGGTGCAAGAATCTAAACAAGGGTACAAGGATTCAAACCTAGAAAACCAGTGCAAGCACAGGTACAAAATTTATATAGAAGGACGGGCATGGTCTGTAAGTGAAAAATACATCATGGCATGTGATTCTATGACCTTGTATGTAAGGCCTCGCTATCACGATTTCTTCATTAGAGGCATGGAGCCATTGCAGCACTTTTGGCCTATTAGGGACAACAGCAAGTGCACTTCTCTCAAGTTTGCTGTGGAATGGGGCAATAATCACAAAGACAAGGCGAAGGCGATTGGGGAGGCTGCGAGCAACTTCATACAAGAAGATCTAAAGATGGACTATGTGTATGATTACATGTTTCATGTGCTAAATGAATATGCAAAGCTCTTGAAATTCAAACCAACTATACCTCCCAATGCAATGGAACTGTGCTCAGAAAAAATGGCATGCCCTGCAACTGGTACATGTAAGAAGTTCATGGTAGAGTCTATGGTGGGGTCTCCAAGTGATGAACTCCCATGCACTCTGCCTCCTCCGTATGATCCTCTGGCTCTCCACGATTTTCTTGAGAGAAAGGCTAACTCAACTAGGCAAGTGGAAGCTTGGGAAAATGAGTATTGGCAAAGCCATGACTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00514 map00514

Pfam Domains

Protein Families

Glyco_transf_90

Protein Analysis

345

Amino Acids

40.42

Weight (kDa)

7.02

Isoelectric Point (pI)

41.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004904)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45830 AT2G45830 AT2G45830 AT2G45830 AT2G45830 AT2G45830 AT3G61270 AT3G61270 AT3G61280 AT3G61280 AT3G61290
fragaria_vesca	FvH4_7g13870
malus_domestica	MD01G1055200.v1.1
prunus_persica	Prupe.2G164600_v2.0.a1 Prupe.2G164700_v2.0.a1 Prupe.2G164900_v2.0.a1 Prupe.2G165100_v2.0.a1 Prupe.2G165200_v2.0.a1
pyrus_communis	pycom01g08050
rosa_chinensis	RchiOBHm_Chr1g0354091
rosa_laevigata	RLG00000028227
rosa_multiflora	Rmu_sc0004632.1_g000009 Rmu_sc0020013.1_g000002
rosa_roxburghii	Rroxscaffold_4G00301230
rosa_rugosa	Rorug01G0241000 Rorug01G0241200
rosa_samantha	Rh1AG252100 Rh1BG224000 Rh1DG251000
rosa_wichuraiana	Rw1G021990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1033
AccB1I	GGYRCC	1 cut(s)	292
AclWI	GGATC	1 cut(s)	932
AcsI	RAATTY	2 cut(s)	474, 788
AfaI	GTAC	3 cut(s)	431, 470, 859
AfiI	CCNNNNNNNGG	2 cut(s)	106, 854
AflIII	ACRYGT	2 cut(s)	750, 860
AgsI	TTSAA	3 cut(s)	441, 787, 793
AloI	GAACNNNNNNTCC	2 cut(s)	167, 199
AluBI	AGCT	4 cut(s)	28, 171, 781, 998
AluI	AGCT	4 cut(s)	28, 171, 781, 998
Alw21I	GWGCWC	2 cut(s)	632, 830
Alw26I	GTCTC	3 cut(s)	209, 367, 900
Alw44I	GTGCAC	1 cut(s)	628
AlwI	GGATC	1 cut(s)	932
AoxI	GGCC	3 cut(s)	118, 551, 605
ApaI	GGGCCC	1 cut(s)	122
ApaLI	GTGCAC	1 cut(s)	628
ApeKI	GCWGC	3 cut(s)	25, 595, 698
ApoI	RAATTY	2 cut(s)	474, 788
ArsI	GACNNNNNNTTYG	2 cut(s)	345, 377
AspS9I	GGNCC	2 cut(s)	118, 119
AsuC2I	CCSGG	1 cut(s)	45
AsuHPI	GGTGA	1 cut(s)	95
AsuNHI	GCTAGC	1 cut(s)	128
BaeGI	GKGCMC	3 cut(s)	122, 297, 632
BanI	GGYRCC	1 cut(s)	292
BanII	GRGCYC	1 cut(s)	122
BbsI	GAAGAC	1 cut(s)	291
Bbv12I	GWGCWC	2 cut(s)	632, 830
BbvI	GCAGC	3 cut(s)	37, 607, 685
BccI	CCATC	2 cut(s)	109, 724
BciVI	GTATCC	1 cut(s)	51
BclI	TGATCA	1 cut(s)	85
BcnI	CCSGG	1 cut(s)	45
BcoDI	GTCTC	3 cut(s)	209, 367, 900
BfaI	CTAG	3 cut(s)	129, 446, 984
BfuI	GTATCC	1 cut(s)	51
BglII	AGATCT	1 cut(s)	721
BisI	GCNGC	3 cut(s)	26, 596, 699
BlsI	GCNGC	3 cut(s)	27, 597, 700
Bme1390I	CCNGG	1 cut(s)	45
BmgT120I	GGNCC	2 cut(s)	118, 119
BmiI	GGNNCC	4 cut(s)	119, 120, 294, 588
BmrFI	CCNGG	1 cut(s)	45
BmtI	GCTAGC	1 cut(s)	132
BpiI	GAAGAC	1 cut(s)	291
BpuEI	CTTGAG	2 cut(s)	623, 983
BpuMI	CCSGG	1 cut(s)	45
BsaI	GGTCTC	2 cut(s)	209, 900
BsaJI	CCNNGG	1 cut(s)	230
BsaXI	ACNNNNNCTCC	4 cut(s)	790, 820, 910, 940
Bsc4I	CCNNNNNNNGG	2 cut(s)	106, 854
Bse1I	ACTGG	4 cut(s)	311, 383, 454, 859
Bse3DI	GCAATG	3 cut(s)	364, 590, 822
BseDI	CCNNGG	1 cut(s)	230
BseGI	GGATG	2 cut(s)	96, 166
BseLI	CCNNNNNNNGG	2 cut(s)	106, 854
BseMI	GCAATG	3 cut(s)	364, 590, 822
BseMII	CTCAG	2 cut(s)	378, 843
BseNI	ACTGG	4 cut(s)	311, 383, 454, 859
BseRI	GAGGAG	1 cut(s)	918
BseSI	GKGCMC	3 cut(s)	122, 297, 632
BseXI	GCAGC	3 cut(s)	37, 607, 685
BseYI	CCCAGC	1 cut(s)	207
BshFI	GGCC	3 cut(s)	120, 553, 607
BshNI	GGYRCC	1 cut(s)	292
BsiHKAI	GWGCWC	2 cut(s)	632, 830
BsiSI	CCGG	1 cut(s)	45
BslFI	GGGAC	1 cut(s)	629
BslI	CCNNNNNNNGG	2 cut(s)	106, 854
BsmAI	GTCTC	3 cut(s)	209, 367, 900
BsmFI	GGGAC	1 cut(s)	629
BsmI	GAATGC	1 cut(s)	130
BsnI	GGCC	3 cut(s)	120, 553, 607
Bso31I	GGTCTC	2 cut(s)	209, 900
Bsp120I	GGGCCC	1 cut(s)	118
Bsp1286I	GDGCHC	4 cut(s)	122, 297, 632, 830
Bsp143I	GATC	3 cut(s)	85, 721, 937
Bsp19I	CCATGG	1 cut(s)	230
BspANI	GGCC	3 cut(s)	120, 553, 607
BspCNI	CTCAG	2 cut(s)	377, 842
BspLI	GGNNCC	4 cut(s)	119, 120, 294, 588
BspOI	GCTAGC	1 cut(s)	132
BspPI	GGATC	1 cut(s)	932
BspT107I	GGYRCC	1 cut(s)	292
BspTNI	GGTCTC	2 cut(s)	209, 900
BsrDI	GCAATG	3 cut(s)	364, 590, 822
BsrI	ACTGG	4 cut(s)	311, 383, 454, 859
BssECI	CCNNGG	1 cut(s)	230
BssMI	GATC	3 cut(s)	85, 721, 937
BssT1I	CCWWGG	1 cut(s)	230
Bst4CI	ACNGT	3 cut(s)	80, 141, 825
BstAPI	GCANNNNNTGC	1 cut(s)	848
BstC8I	GCNNGC	4 cut(s)	130, 461, 703, 844
BstDEI	CTNAG	2 cut(s)	364, 829
BstDSI	CCRYGG	1 cut(s)	230
BstF5I	GGATG	2 cut(s)	96, 166
BstKTI	GATC	3 cut(s)	88, 724, 940
BstMAI	GTCTC	3 cut(s)	209, 367, 900
BstMBI	GATC	3 cut(s)	85, 721, 937
BstMWI	GCNNNNNNNGC	3 cut(s)	595, 604, 848
BstNSI	RCATGY	4 cut(s)	528, 754, 846, 864
BstSCI	CCNGG	1 cut(s)	43
BstSLI	GKGCMC	3 cut(s)	122, 297, 632
BstV1I	GCAGC	3 cut(s)	37, 607, 685
BstV2I	GAAGAC	1 cut(s)	291
BstX2I	RGATCY	1 cut(s)	721
BstXI	CCANNNNNNTGG	1 cut(s)	817
BstYI	RGATCY	1 cut(s)	721
BsuI	GTATCC	1 cut(s)	51
BsuRI	GGCC	3 cut(s)	120, 553, 607
BtgI	CCRYGG	1 cut(s)	230
BtsCI	GGATG	2 cut(s)	96, 166
BtsIMutI	CAGTG	1 cut(s)	461
Cac8I	GCNNGC	4 cut(s)	130, 461, 703, 844
Cfr13I	GGNCC	2 cut(s)	118, 119
Csp6I	GTAC	3 cut(s)	430, 469, 858
CspCI	CAANNNNNGTGG	2 cut(s)	123, 158
CviQI	GTAC	3 cut(s)	430, 469, 858
DdeI	CTNAG	2 cut(s)	364, 829
DpnI	GATC	3 cut(s)	87, 723, 939
DpnII	GATC	3 cut(s)	85, 721, 937
Eco130I	CCWWGG	1 cut(s)	230
Eco147I	AGGCCT	1 cut(s)	553
Eco24I	GRGCYC	1 cut(s)	122
Eco31I	GGTCTC	2 cut(s)	209, 900
EcoO109I	RGGNCCY	1 cut(s)	118
EcoT14I	CCWWGG	1 cut(s)	230
EcoT38I	GRGCYC	1 cut(s)	122
ErhI	CCWWGG	1 cut(s)	230
FaqI	GGGAC	1 cut(s)	629
FbaI	TGATCA	1 cut(s)	85
Fnu4HI	GCNGC	3 cut(s)	26, 596, 699
FokI	GGATG	2 cut(s)	83, 173
FriOI	GRGCYC	1 cut(s)	122
Fsp4HI	GCNGC	3 cut(s)	26, 596, 699
FspBI	CTAG	3 cut(s)	129, 446, 984
GluI	GCNGC	3 cut(s)	26, 596, 699
GsaI	CCCAGC	1 cut(s)	211
HaeIII	GGCC	3 cut(s)	120, 553, 607
HapII	CCGG	1 cut(s)	45
HindIII	AAGCTT	1 cut(s)	996
HinfI	GANTC	4 cut(s)	416, 437, 530, 881
HpaII	CCGG	1 cut(s)	45
HphI	GGTGA	1 cut(s)	95
Hpy166II	GTNNAC	2 cut(s)	6, 630
Hpy188I	TCNGA	4 cut(s)	160, 367, 402, 832
Hpy188III	TCNNGA	3 cut(s)	563, 784, 962
Hpy8I	GTNNAC	2 cut(s)	6, 630
HpyAV	CCTTC	4 cut(s)	254, 356, 479, 676
HpyCH4III	ACNGT	3 cut(s)	80, 141, 825
HpyCH4IV	ACGT	1 cut(s)	8
HpyF10VI	GCNNNNNNNGC	3 cut(s)	595, 604, 848
HpyF3I	CTNAG	2 cut(s)	364, 829
HpySE526I	ACGT	1 cut(s)	8
Ksp22I	TGATCA	1 cut(s)	85
Kzo9I	GATC	3 cut(s)	85, 721, 937
LmnI	GCTCC	2 cut(s)	168, 586
Lsp1109I	GCAGC	3 cut(s)	37, 607, 685
MaeI	CTAG	3 cut(s)	129, 446, 984
MaeII	ACGT	1 cut(s)	8
MaeIII	GTNAC	1 cut(s)	314
MalI	GATC	3 cut(s)	87, 723, 939
MboI	GATC	3 cut(s)	85, 721, 937
MboII	GAAGA	3 cut(s)	296, 562, 731
MflI	RGATCY	1 cut(s)	721
MhlI	GDGCHC	4 cut(s)	122, 297, 632, 830
MluCI	AATT	3 cut(s)	403, 474, 788
MlyI	GAGTC	1 cut(s)	890
MnlI	CCTC	8 cut(s)	157, 564, 572, 688, 816, 936, 939, 951
MseI	TTAA	2 cut(s)	32, 75
MspI	CCGG	1 cut(s)	45
MspR9I	CCNGG	1 cut(s)	45
Mva1269I	GAATGC	1 cut(s)	130
MwoI	GCNNNNNNNGC	3 cut(s)	595, 604, 848
NciI	CCSGG	1 cut(s)	45
NcoI	CCATGG	1 cut(s)	230
NdeII	GATC	3 cut(s)	85, 721, 937
NheI	GCTAGC	1 cut(s)	128
NlaIV	GGNNCC	4 cut(s)	119, 120, 294, 588
NspI	RCATGY	4 cut(s)	528, 754, 846, 864
PaeI	GCATGC	1 cut(s)	846
PceI	AGGCCT	1 cut(s)	553
PciI	ACATGT	2 cut(s)	750, 860
PctI	GAATGC	1 cut(s)	130
PfeI	GAWTC	3 cut(s)	416, 437, 530
PkrI	GCNGC	3 cut(s)	27, 597, 700
PleI	GAGTC	1 cut(s)	889
PpsI	GAGTC	1 cut(s)	889
PscI	ACATGT	2 cut(s)	750, 860
PsiI	TTATAA	1 cut(s)	1033
PspFI	CCCAGC	1 cut(s)	207
PspN4I	GGNNCC	4 cut(s)	119, 120, 294, 588
PspOMI	GGGCCC	1 cut(s)	118
PspPI	GGNCC	2 cut(s)	118, 119
PsuI	RGATCY	1 cut(s)	721
RsaI	GTAC	3 cut(s)	431, 470, 859
RsaNI	GTAC	3 cut(s)	430, 469, 858
SaqAI	TTAA	2 cut(s)	32, 75
SatI	GCNGC	3 cut(s)	26, 596, 699
Sau3AI	GATC	3 cut(s)	85, 721, 937
Sau96I	GGNCC	2 cut(s)	118, 119
SchI	GAGTC	1 cut(s)	890
ScrFI	CCNGG	1 cut(s)	45
SduI	GDGCHC	4 cut(s)	122, 297, 632, 830
SmlI	CTYRAG	2 cut(s)	638, 962
SmoI	CTYRAG	2 cut(s)	638, 962
SphI	GCATGC	1 cut(s)	846
Sse9I	AATT	3 cut(s)	403, 474, 788
SseBI	AGGCCT	1 cut(s)	553
SspMI	CTAG	3 cut(s)	129, 446, 984
StuI	AGGCCT	1 cut(s)	553
StyD4I	CCNGG	1 cut(s)	43
StyI	CCWWGG	1 cut(s)	230
TaaI	ACNGT	3 cut(s)	80, 141, 825
TaiI	ACGT	1 cut(s)	11
TaqI	TCGA	2 cut(s)	148, 331
TasI	AATT	3 cut(s)	403, 474, 788
TfiI	GAWTC	3 cut(s)	416, 437, 530
Tru1I	TTAA	2 cut(s)	32, 75
Tru9I	TTAA	2 cut(s)	32, 75
TscAI	CASTG	1 cut(s)	461
TseI	GCWGC	3 cut(s)	25, 595, 698
TspDTI	ATGAA	6 cut(s)	562, 700, 746, 783, 862, 921
TspGWI	ACGGA	1 cut(s)	921
TspRI	CASTG	1 cut(s)	461
VneI	GTGCAC	1 cut(s)	628
XapI	RAATTY	2 cut(s)	474, 788
XceI	RCATGY	4 cut(s)	528, 754, 846, 864
XspI	CTAG	3 cut(s)	129, 446, 984

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.