Prupe.2G194700_v2.0.a1

Prolamin-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
23277857 .. 23278451
595 bp
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UTR
Exon/CDS
Intron
Prupe.2G194700.1

Sequence Viewer

Length: 405 bp
ATGGTGAAGAGTGGAGTTGCTGTGTTTTTCCTTCTTTTGGGTTTAGCTTTGACACAATGCATGGCTACTGATGATGCCAAATCTCCATCACCACCCACCCCAGCCCACCCAGGGTTTTCATGGTGGCACCCTGACCCTAAGCTTATAAAGTGCATGGGAGATTACCGTGCTGCTGCTGGAACTTGTTACCGTGAGGTTTGTGTGTCGTTCTGGACCCAAAAAGTCACCATTCAAGAAGATTGCTGCAAAGCCATTGTACAACTTGATGGAGATTGTTCCTCAGCTGTGTTCAGCAGGTTCAACAACCCTTTCTTCCAGCTTTTGTTGAAGGAACACTGCTCAAACAAAGGAGAATCATCGGCACCGGCACCACCAAAGGCAACCCCATCACCTCCAAAAGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

135

Amino Acids

14.54

Weight (kDa)

8.12

Isoelectric Point (pI)

37.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016508)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 146
Acc36I ACCTGC 1 cut(s) 285
AccB1I GGYRCC 3 cut(s) 126, 361, 367
AfaI GTAC 1 cut(s) 258
AfiI CCNNNNNNNGG 2 cut(s) 37, 111
AgsI TTSAA 3 cut(s) 233, 301, 328
AjnI CCWGG 1 cut(s) 109
AluBI AGCT 4 cut(s) 47, 142, 284, 319
AluI AGCT 4 cut(s) 47, 142, 284, 319
ApeKI GCWGC 3 cut(s) 170, 173, 243
AspS9I GGNCC 1 cut(s) 213
AsuHPI GGTGA 4 cut(s) 16, 81, 217, 381
AvaII GGWCC 1 cut(s) 213
BanI GGYRCC 3 cut(s) 126, 361, 367
BbvCI CCTCAGC 1 cut(s) 280
BbvI GCAGC 3 cut(s) 157, 160, 230
BccI CCATC 3 cut(s) 94, 260, 394
BciT130I CCWGG 1 cut(s) 111
BfuAI ACCTGC 1 cut(s) 285
BisI GCNGC 3 cut(s) 171, 174, 244
BlsI GCNGC 3 cut(s) 172, 175, 245
Bme1390I CCNGG 1 cut(s) 111
Bme18I GGWCC 1 cut(s) 213
BmgT120I GGNCC 1 cut(s) 213
BmiI GGNNCC 4 cut(s) 128, 215, 363, 369
BmrFI CCNGG 1 cut(s) 111
BmsI GCATC 1 cut(s) 64
Bpu10I CCTNAGC 2 cut(s) 138, 280
BsaJI CCNNGG 2 cut(s) 109, 110
BsaXI ACNNNNNCTCC 2 cut(s) 6, 36
Bsc4I CCNNNNNNNGG 2 cut(s) 37, 111
Bse118I RCCGGY 1 cut(s) 364
BseBI CCWGG 1 cut(s) 111
BseDI CCNNGG 2 cut(s) 109, 110
BseLI CCNNNNNNNGG 2 cut(s) 37, 111
BseMII CTCAG 1 cut(s) 294
BseXI GCAGC 3 cut(s) 157, 160, 230
BseYI CCCAGC 1 cut(s) 100
BshNI GGYRCC 3 cut(s) 126, 361, 367
BsiSI CCGG 1 cut(s) 365
BslI CCNNNNNNNGG 2 cut(s) 37, 111
Bsp1407I TGTACA 1 cut(s) 256
BspCNI CTCAG 1 cut(s) 293
BspLI GGNNCC 4 cut(s) 128, 215, 363, 369
BspMI ACCTGC 1 cut(s) 285
BspT107I GGYRCC 3 cut(s) 126, 361, 367
BsrFI RCCGGY 1 cut(s) 364
BsrGI TGTACA 1 cut(s) 256
BssAI RCCGGY 1 cut(s) 364
BssECI CCNNGG 2 cut(s) 109, 110
Bst2UI CCWGG 1 cut(s) 111
Bst4CI ACNGT 2 cut(s) 167, 191
Bst6I CTCTTC 1 cut(s) 2
BstAUI TGTACA 1 cut(s) 256
BstDEI CTNAG 2 cut(s) 138, 280
BstNI CCWGG 1 cut(s) 111
BstSCI CCNGG 1 cut(s) 109
BstV1I GCAGC 3 cut(s) 157, 160, 230
BtsI GCAGTG 1 cut(s) 334
BtsIMutI CAGTG 1 cut(s) 334
BveI ACCTGC 1 cut(s) 285
Cfr10I RCCGGY 1 cut(s) 364
Cfr13I GGNCC 1 cut(s) 213
Csp6I GTAC 1 cut(s) 257
CviAII CATG 3 cut(s) 61, 120, 154
CviJI RGCY 7 cut(s) 47, 65, 104, 142, 251, 284, 319
CviKI_1 RGCY 7 cut(s) 47, 65, 104, 142, 251, 284, 319
CviQI GTAC 1 cut(s) 257
DdeI CTNAG 2 cut(s) 138, 280
Eam1104I CTCTTC 1 cut(s) 2
EarI CTCTTC 1 cut(s) 2
Eco47I GGWCC 1 cut(s) 213
EcoRII CCWGG 1 cut(s) 109
EcoT22I ATGCAT 1 cut(s) 62
FaeI CATG 3 cut(s) 64, 123, 157
FaiI YATR 5 cut(s) 62, 121, 146, 155, 403
FatI CATG 3 cut(s) 60, 119, 153
Fnu4HI GCNGC 3 cut(s) 171, 174, 244
Fsp4HI GCNGC 3 cut(s) 171, 174, 244
GluI GCNGC 3 cut(s) 171, 174, 244
GsaI CCCAGC 1 cut(s) 104
HapII CCGG 1 cut(s) 365
Hin1II CATG 3 cut(s) 64, 123, 157
HindIII AAGCTT 1 cut(s) 140
HinfI GANTC 1 cut(s) 353
HpaII CCGG 1 cut(s) 365
HphI GGTGA 4 cut(s) 16, 81, 217, 381
Hpy188III TCNNGA 2 cut(s) 211, 233
HpyAV CCTTC 2 cut(s) 41, 322
HpyCH4III ACNGT 2 cut(s) 167, 191
HpyCH4V TGCA 3 cut(s) 60, 153, 246
HpyF3I CTNAG 2 cut(s) 138, 280
Hsp92II CATG 3 cut(s) 64, 123, 157
LpnPI CCDG 9 cut(s) 96, 114, 123, 144, 162, 196, 280, 329, 378
Lsp1109I GCAGC 3 cut(s) 157, 160, 230
LweI GCATC 1 cut(s) 64
MaeIII GTNAC 2 cut(s) 185, 223
MboII GAAGA 3 cut(s) 19, 248, 304
MnlI CCTC 3 cut(s) 187, 289, 402
Mph1103I ATGCAT 1 cut(s) 62
MspA1I CMGCKG 1 cut(s) 284
MspI CCGG 1 cut(s) 365
MspR9I CCNGG 1 cut(s) 111
MvaI CCWGG 1 cut(s) 111
NlaIII CATG 3 cut(s) 64, 123, 157
NlaIV GGNNCC 4 cut(s) 128, 215, 363, 369
NmuCI GTSAC 1 cut(s) 223
NsiI ATGCAT 1 cut(s) 62
PasI CCCWGGG 1 cut(s) 110
PfeI GAWTC 1 cut(s) 353
PkrI GCNGC 3 cut(s) 172, 175, 245
PsiI TTATAA 1 cut(s) 146
Psp6I CCWGG 1 cut(s) 109
PspFI CCCAGC 1 cut(s) 100
PspGI CCWGG 1 cut(s) 109
PspN4I GGNNCC 4 cut(s) 128, 215, 363, 369
PspPI GGNCC 1 cut(s) 213
PvuII CAGCTG 1 cut(s) 284
RsaI GTAC 1 cut(s) 258
RsaNI GTAC 1 cut(s) 257
SatI GCNGC 3 cut(s) 171, 174, 244
Sau96I GGNCC 1 cut(s) 213
ScrFI CCNGG 1 cut(s) 111
SetI ASST 7 cut(s) 49, 144, 198, 286, 299, 321, 394
SfaNI GCATC 1 cut(s) 64
SinI GGWCC 1 cut(s) 213
StyD4I CCNGG 1 cut(s) 109
TaaI ACNGT 2 cut(s) 167, 191
TatI WGTACW 1 cut(s) 256
TfiI GAWTC 1 cut(s) 353
TscAI CASTG 1 cut(s) 341
TseFI GTSAC 1 cut(s) 223
TseI GCWGC 3 cut(s) 170, 173, 243
Tsp45I GTSAC 1 cut(s) 223
TspDTI ATGAA 1 cut(s) 108
TspRI CASTG 1 cut(s) 341
VpaK11BI GGWCC 1 cut(s) 213
XcmI CCANNNNNNNNNTGG 1 cut(s) 117
Zsp2I ATGCAT 1 cut(s) 62
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.