Prupe.2G217600_v2.0.a1

IQ-DOMAIN 1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
24748470 .. 24752958
4489 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G217600.1

Sequence Viewer

Length: 1500 bp
ATGGGGAGGAAAGGGAGTTGGTTTTCTGCAGTGAAGAAAGCCCTCATCGCTGATTCAAAGGAAAAGAAAGATCAGAAAACACGCAAGTCAAAGAAAAAATGGTTTGGGAAGCAGAAGAATGAGGATGTGGTTTCTTCATACGAAGAAAGTGCGTTGGTTATCCCTGTCCCTGACACGACCCCTGCCCCTCCTCCTCCTCCTCTGCCTCTAAAACAAGATGTCAAATTAGCTGAGGCTGAGAATGCACAGAGCAAGCATGTTTACTCTGTGGCACTTGCCACTGCTGTGGCTGCAGAGGCAGCTGTTGCTGCTGCTCAGGCTGCTGCAGAGGTGGTTCGTCTTACTGCTGTGCCTGGGCCCCATTACTCAGGAAAGTCGCTTCAGGAGGTAGCAGCTGTCAAGATTCAGACGGCATTCCGAGGGCACTTGGCAAGAAGGGCATTGCGGGCTTTGAGGGGGTTGGTGAGGTTGAAATCATTGATAGAGGGCCAATCTGTTAAACGGCAAGCAACTACCACACTAAGATGCATGCAGACTCTTGCTCGTGTGCAGTCTCAGATTCGTGCAAGGAGAATCAGAATGTCTGAGGAGAATCAGGCACTTCAGCGACAGCTCCAACACAAACAAGAGAAAGAGCTTGAGAAATTCAAAGCTTCTATGGGAGAAGAATGGAATGATAGCACCCAATCTAAGGAGCAGGTTGAGGCAAAGCTACAAAGCAAACAAGAAGCTGCTATAAGAAGAGAAAGGGCTTTGGCTTATTCATTCTCTCACCAGCAAATGTGGAAGAACTCTTCAAAATCTGAACATCCTACGTTCATGGATCCCAGCAATCCCCACTGGGGTTGGAGTTGGTTAGAGCGATGGATGGCTGCAAGGCCGTGGGAAAGCCGAAGTACAGTAGACTACAATGACAGGGCCTCCATGAGGAGTGCAGCTAGCCATGCCTCCATGTCTGTTGGGGAAATCACCAAAGCTTATACACTTCGTGATAATAAGCCTTCCCCTAGGACCCCGACTGCCGTAAAATCAAGCAGGCCTCCTAGTCGCCAATCCCCTTCAACTCCTTTCTCCAGGGCACAATCTTCATCATCAGTGACTGGGAAAACGCCAAGAGGAAATGGCTGGGGAGGAGATGAGGACTCCAGGAGTACATTCAGCGTCCAGTCAGAGCGCTTCAACAGGAGGCATAGCATTGCAGGGTCCTCTGTGAGAGATGACGAGAGCCTTGCAAGCTCGCCTTCAGTTCCAAGTTACATGACACCCACAAAATCAACAAAGGCCAGGTCTCGGTTGGCAAGCCCAAGCTCAAACCAGTTTGACAAGAATGGGACACCATCAGAGAAGGGATCAGTGAGTTCTGTAAAGAAGCGGTTGTCATACCCTGCTTCCCCAGCTGGACCAAGAAGGCACTCAGGTCCTCCTGGGGTTGATACTAGCTCTGTTAAAGGCACTGCCGTGCTTGAGAAGAACGTTAGCAATGGAGGGGGCAGCAGGTAG

Protein Analysis

500

Amino Acids

54.8

Weight (kDa)

10.36

Isoelectric Point (pI)

66.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 688, 1485
AccI GTMKAC 1 cut(s) 903
AciI CCGC 2 cut(s) 445, 1372
AclI AACGTT 1 cut(s) 1473
AclWI GGATC 3 cut(s) 818, 831, 1357
AcsI RAATTY 1 cut(s) 644
AcuI CTGAAG 3 cut(s) 365, 587, 1227
AdeI CACNNNGTG 1 cut(s) 989
AfaI GTAC 2 cut(s) 898, 1153
AfeI AGCGCT 1 cut(s) 1175
AfiI CCNNNNNNNGG 4 cut(s) 691, 842, 927, 1290
AgsI TTSAA 6 cut(s) 57, 472, 649, 798, 1062, 1180
AjnI CCWGG 5 cut(s) 352, 1073, 1145, 1283, 1423
AleI CACNNNNGTG 2 cut(s) 284, 1457
Alw26I GTCTC 2 cut(s) 558, 1293
AlwI GGATC 3 cut(s) 818, 831, 1357
AlwNI CAGNNNCTG 1 cut(s) 1100
Aor51HI AGCGCT 1 cut(s) 1175
AoxI GGCC 6 cut(s) 356, 487, 878, 918, 1037, 1281
ApaI GGGCCC 1 cut(s) 360
ApoI RAATTY 1 cut(s) 644
ArsI GACNNNNNNTTYG 2 cut(s) 1271, 1303
AspA2I CCTAGG 1 cut(s) 1007
AspLEI GCGC 1 cut(s) 1176
AspS9I GGNCC 8 cut(s) 356, 357, 487, 918, 1011, 1203, 1400, 1418
AsuHPI GGTGA 3 cut(s) 475, 764, 961
AsuNHI GCTAGC 1 cut(s) 938
AvaII GGWCC 4 cut(s) 1011, 1203, 1400, 1418
AvrII CCTAGG 1 cut(s) 1007
BaeGI GKGCMC 3 cut(s) 360, 426, 1081
BamHI GGATCC 1 cut(s) 823
BanII GRGCYC 1 cut(s) 360
BauI CACGAG 1 cut(s) 543
BbvCI CCTCAGC 1 cut(s) 231
BccI CCATC 3 cut(s) 858, 862, 1345
BceAI ACGGC 5 cut(s) 426, 518, 865, 1007, 1442
BcgI CGANNNNNNTGC 4 cut(s) 131, 165, 1211, 1245
BciT130I CCWGG 5 cut(s) 354, 1075, 1147, 1285, 1425
BcoDI GTCTC 2 cut(s) 558, 1293
BfaI CTAG 4 cut(s) 939, 1008, 1044, 1437
BfmI CTRYAG 3 cut(s) 27, 291, 324
BfoI RGCGCY 1 cut(s) 1177
BfuAI ACCTGC 2 cut(s) 688, 1485
BlnI CCTAGG 1 cut(s) 1007
Bme1390I CCNGG 5 cut(s) 354, 1075, 1147, 1285, 1425
Bme18I GGWCC 4 cut(s) 1011, 1203, 1400, 1418
BmgT120I GGNCC 8 cut(s) 356, 357, 487, 918, 1011, 1203, 1400, 1418
BmiI GGNNCC 5 cut(s) 358, 359, 825, 1013, 1204
BmrFI CCNGG 5 cut(s) 354, 1075, 1147, 1285, 1425
BmrI ACTGGG 2 cut(s) 850, 1110
BmsI GCATC 1 cut(s) 515
BmtI GCTAGC 1 cut(s) 942
BmuI ACTGGG 2 cut(s) 850, 1110
BpmI CTGGAG 2 cut(s) 1057, 1129
Bpu10I CCTNAGC 2 cut(s) 231, 315
BpuEI CTTGAG 2 cut(s) 659, 1484
BsaI GGTCTC 1 cut(s) 1293
BsaJI CCNNGG 6 cut(s) 353, 418, 881, 1007, 1074, 1424
BsaXI ACNNNNNCTCC 2 cut(s) 905, 935
Bsc4I CCNNNNNNNGG 4 cut(s) 691, 842, 927, 1290
Bse1I ACTGG 4 cut(s) 845, 1105, 1165, 1315
Bse3DI GCAATG 3 cut(s) 440, 1194, 1486
BseBI CCWGG 5 cut(s) 354, 1075, 1147, 1285, 1425
BseDI CCNNGG 6 cut(s) 353, 418, 881, 1007, 1074, 1424
BseGI GGATG 3 cut(s) 130, 808, 873
BseLI CCNNNNNNNGG 4 cut(s) 691, 842, 927, 1290
BseMI GCAATG 3 cut(s) 440, 1194, 1486
BseMII CTCAG 7 cut(s) 222, 228, 329, 381, 569, 576, 1428
BseNI ACTGG 4 cut(s) 845, 1105, 1165, 1315
BseRI GAGGAG 7 cut(s) 180, 183, 186, 189, 602, 943, 1146
BseSI GKGCMC 3 cut(s) 360, 426, 1081
BseYI CCCAGC 3 cut(s) 827, 1125, 1393
BsgI GTGCAG 2 cut(s) 569, 954
BshFI GGCC 6 cut(s) 358, 489, 880, 920, 1039, 1283
BslFI GGGAC 2 cut(s) 152, 1345
BslI CCNNNNNNNGG 4 cut(s) 691, 842, 927, 1290
BsmAI GTCTC 2 cut(s) 558, 1293
BsmFI GGGAC 2 cut(s) 152, 1345
BsmI GAATGC 2 cut(s) 247, 413
BsnI GGCC 6 cut(s) 358, 489, 880, 920, 1039, 1283
Bso31I GGTCTC 1 cut(s) 1293
Bsp120I GGGCCC 1 cut(s) 356
Bsp1286I GDGCHC 3 cut(s) 360, 426, 1081
Bsp143I GATC 3 cut(s) 70, 823, 1349
BspACI CCGC 2 cut(s) 445, 1372
BspANI GGCC 6 cut(s) 358, 489, 880, 920, 1039, 1283
BspCNI CTCAG 7 cut(s) 223, 229, 328, 380, 568, 577, 1427
BspLI GGNNCC 5 cut(s) 358, 359, 825, 1013, 1204
BspMAI CTGCAG 3 cut(s) 31, 295, 328
BspMI ACCTGC 2 cut(s) 688, 1485
BspOI GCTAGC 1 cut(s) 942
BspPI GGATC 3 cut(s) 818, 831, 1357
BspTNI GGTCTC 1 cut(s) 1293
BsrDI GCAATG 3 cut(s) 440, 1194, 1486
BsrI ACTGG 4 cut(s) 845, 1105, 1165, 1315
BssECI CCNNGG 6 cut(s) 353, 418, 881, 1007, 1074, 1424
BssMI GATC 3 cut(s) 70, 823, 1349
BssSI CACGAG 1 cut(s) 543
BssT1I CCWWGG 1 cut(s) 1007
Bst2BI CACGAG 1 cut(s) 543
Bst2UI CCWGG 5 cut(s) 354, 1075, 1147, 1285, 1425
Bst4CI ACNGT 1 cut(s) 901
Bst6I CTCTTC 2 cut(s) 736, 799
BstAPI GCANNNNNTGC 1 cut(s) 305
BstC8I GCNNGC 9 cut(s) 254, 447, 507, 530, 940, 1037, 1234, 1238, 1300
BstDEI CTNAG 9 cut(s) 231, 237, 315, 367, 521, 555, 585, 690, 1414
BstDSI CCRYGG 1 cut(s) 881
BstENI CCTNNNNNAGG 1 cut(s) 925
BstF5I GGATG 3 cut(s) 130, 808, 873
BstH2I RGCGCY 1 cut(s) 1177
BstHHI GCGC 1 cut(s) 1176
BstKTI GATC 3 cut(s) 73, 826, 1352
BstMAI GTCTC 2 cut(s) 558, 1293
BstMBI GATC 3 cut(s) 70, 823, 1349
BstNI CCWGG 5 cut(s) 354, 1075, 1147, 1285, 1425
BstNSI RCATGY 2 cut(s) 260, 532
BstSCI CCNGG 5 cut(s) 352, 1073, 1145, 1283, 1423
BstSFI CTRYAG 3 cut(s) 27, 291, 324
BstSLI GKGCMC 3 cut(s) 360, 426, 1081
BstX2I RGATCY 1 cut(s) 823
BstXI CCANNNNNNTGG 1 cut(s) 286
BstYI RGATCY 1 cut(s) 823
BsuRI GGCC 6 cut(s) 358, 489, 880, 920, 1039, 1283
BtgI CCRYGG 1 cut(s) 881
BtgZI GCGATG 2 cut(s) 31, 877
BtsCI GGATG 3 cut(s) 130, 808, 873
BtsI GCAGTG 3 cut(s) 36, 279, 1452
BtsIMutI CAGTG 6 cut(s) 36, 279, 838, 1101, 1359, 1452
BveI ACCTGC 2 cut(s) 688, 1485
Cac8I GCNNGC 9 cut(s) 254, 447, 507, 530, 940, 1037, 1234, 1238, 1300
CaiI CAGNNNCTG 1 cut(s) 1100
CfoI GCGC 1 cut(s) 1176
Cfr13I GGNCC 8 cut(s) 356, 357, 487, 918, 1011, 1203, 1400, 1418
CseI GACGC 1 cut(s) 1150
Csp6I GTAC 2 cut(s) 897, 1152
CspCI CAANNNNNGTGG 2 cut(s) 827, 862
CviAII CATG 7 cut(s) 257, 529, 820, 925, 944, 952, 1258
CviQI GTAC 2 cut(s) 897, 1152
DdeI CTNAG 9 cut(s) 231, 237, 315, 367, 521, 555, 585, 690, 1414
DpnI GATC 3 cut(s) 72, 825, 1351
DpnII GATC 3 cut(s) 70, 823, 1349
DraIII CACNNNGTG 1 cut(s) 989
Eam1104I CTCTTC 2 cut(s) 736, 799
EarI CTCTTC 2 cut(s) 736, 799
Eco130I CCWWGG 1 cut(s) 1007
Eco147I AGGCCT 1 cut(s) 1039
Eco24I GRGCYC 1 cut(s) 360
Eco31I GGTCTC 1 cut(s) 1293
Eco47I GGWCC 4 cut(s) 1011, 1203, 1400, 1418
Eco47III AGCGCT 1 cut(s) 1175
Eco57I CTGAAG 3 cut(s) 365, 587, 1227
EcoNI CCTNNNNNAGG 1 cut(s) 925
EcoO109I RGGNCCY 5 cut(s) 357, 918, 1011, 1203, 1418
EcoRII CCWGG 5 cut(s) 352, 1073, 1145, 1283, 1423
EcoT14I CCWWGG 1 cut(s) 1007
EcoT22I ATGCAT 1 cut(s) 530
EcoT38I GRGCYC 1 cut(s) 360
ErhI CCWWGG 1 cut(s) 1007
FaeI CATG 7 cut(s) 260, 532, 823, 928, 947, 955, 1261
FalI AAGNNNNNCTT 2 cut(s) 1225, 1257
FaqI GGGAC 2 cut(s) 152, 1345
FatI CATG 7 cut(s) 256, 528, 819, 924, 943, 951, 1257
FauI CCCGC 1 cut(s) 438
FblI GTMKAC 1 cut(s) 903
FokI GGATG 3 cut(s) 137, 795, 880
FriOI GRGCYC 1 cut(s) 360
FspBI CTAG 4 cut(s) 939, 1008, 1044, 1437
GlaI GCGC 1 cut(s) 1175
GsaI CCCAGC 3 cut(s) 831, 1129, 1397
GsuI CTGGAG 2 cut(s) 1057, 1129
HaeII RGCGCY 1 cut(s) 1177
HaeIII GGCC 6 cut(s) 358, 489, 880, 920, 1039, 1283
HgaI GACGC 1 cut(s) 1150
HhaI GCGC 1 cut(s) 1176
Hin1II CATG 7 cut(s) 260, 532, 823, 928, 947, 955, 1261
Hin6I GCGC 1 cut(s) 1174
HinP1I GCGC 1 cut(s) 1174
HindIII AAGCTT 2 cut(s) 651, 975
HinfI GANTC 7 cut(s) 53, 403, 535, 559, 573, 592, 1142
HphI GGTGA 3 cut(s) 475, 764, 961
Hpy166II GTNNAC 2 cut(s) 262, 904
Hpy188I TCNGA 9 cut(s) 75, 408, 419, 558, 578, 586, 805, 1171, 1342
Hpy188III TCNNGA 4 cut(s) 369, 383, 400, 989
Hpy8I GTNNAC 2 cut(s) 262, 904
HpyAV CCTTC 6 cut(s) 429, 1011, 1068, 1251, 1339, 1401
HpyCH4III ACNGT 1 cut(s) 901
HpyCH4IV ACGT 2 cut(s) 815, 1473
HpyF3I CTNAG 9 cut(s) 231, 237, 315, 367, 521, 555, 585, 690, 1414
HpySE526I ACGT 2 cut(s) 815, 1473
Hsp92II CATG 7 cut(s) 260, 532, 823, 928, 947, 955, 1261
HspAI GCGC 1 cut(s) 1174
Kzo9I GATC 3 cut(s) 70, 823, 1349
LmnI GCTCC 2 cut(s) 618, 694
LweI GCATC 1 cut(s) 515
MaeI CTAG 4 cut(s) 939, 1008, 1044, 1437
MaeII ACGT 2 cut(s) 815, 1473
MaeIII GTNAC 2 cut(s) 1096, 1253
MalI GATC 3 cut(s) 72, 825, 1351
MboI GATC 3 cut(s) 70, 823, 1349
MflI RGATCY 1 cut(s) 823
MhlI GDGCHC 3 cut(s) 360, 426, 1081
MluCI AATT 2 cut(s) 224, 644
MlyI GAGTC 2 cut(s) 529, 1136
MmeI TCCRAC 2 cut(s) 640, 827
Mph1103I ATGCAT 1 cut(s) 530
MseI TTAA 2 cut(s) 498, 1446
MslI CAYNNNNRTG 3 cut(s) 284, 523, 1457
MspA1I CMGCKG 3 cut(s) 302, 395, 1397
MspR9I CCNGG 5 cut(s) 354, 1075, 1147, 1285, 1425
Mva1269I GAATGC 2 cut(s) 247, 413
MvaI CCWGG 5 cut(s) 354, 1075, 1147, 1285, 1425
NdeII GATC 3 cut(s) 70, 823, 1349
NheI GCTAGC 1 cut(s) 938
NlaIII CATG 7 cut(s) 260, 532, 823, 928, 947, 955, 1261
NlaIV GGNNCC 5 cut(s) 358, 359, 825, 1013, 1204
NmuCI GTSAC 1 cut(s) 1096
NsiI ATGCAT 1 cut(s) 530
NspI RCATGY 2 cut(s) 260, 532
OliI CACNNNNGTG 2 cut(s) 284, 1457
PaeI GCATGC 1 cut(s) 532
PceI AGGCCT 1 cut(s) 1039
PctI GAATGC 2 cut(s) 247, 413
PfeI GAWTC 5 cut(s) 53, 403, 559, 573, 592
PfoI TCCNGGA 1 cut(s) 1145
PleI GAGTC 2 cut(s) 529, 1136
PpsI GAGTC 2 cut(s) 529, 1136
PpuMI RGGWCCY 3 cut(s) 1011, 1203, 1418
Psp1406I AACGTT 1 cut(s) 1473
Psp5II RGGWCCY 3 cut(s) 1011, 1203, 1418
Psp6I CCWGG 5 cut(s) 352, 1073, 1145, 1283, 1423
PspFI CCCAGC 3 cut(s) 827, 1125, 1393
PspGI CCWGG 5 cut(s) 352, 1073, 1145, 1283, 1423
PspN4I GGNNCC 5 cut(s) 358, 359, 825, 1013, 1204
PspOMI GGGCCC 1 cut(s) 356
PspPI GGNCC 8 cut(s) 356, 357, 487, 918, 1011, 1203, 1400, 1418
PspPPI RGGWCCY 3 cut(s) 1011, 1203, 1418
PstI CTGCAG 3 cut(s) 31, 295, 328
PstNI CAGNNNCTG 1 cut(s) 1100
PsuI RGATCY 1 cut(s) 823
PvuII CAGCTG 3 cut(s) 302, 395, 1397
RsaI GTAC 2 cut(s) 898, 1153
RsaNI GTAC 2 cut(s) 897, 1152
RseI CAYNNNNRTG 3 cut(s) 284, 523, 1457
SaqAI TTAA 2 cut(s) 498, 1446
Sau3AI GATC 3 cut(s) 70, 823, 1349
Sau96I GGNCC 8 cut(s) 356, 357, 487, 918, 1011, 1203, 1400, 1418
SchI GAGTC 2 cut(s) 529, 1136
ScrFI CCNGG 5 cut(s) 354, 1075, 1147, 1285, 1425
SduI GDGCHC 3 cut(s) 360, 426, 1081
SfaNI GCATC 1 cut(s) 515
SfcI CTRYAG 3 cut(s) 27, 291, 324
SinI GGWCC 4 cut(s) 1011, 1203, 1400, 1418
SmiMI CAYNNNNRTG 3 cut(s) 284, 523, 1457
SmlI CTYRAG 2 cut(s) 638, 1463
SmoI CTYRAG 2 cut(s) 638, 1463
SphI GCATGC 1 cut(s) 532
Sse9I AATT 2 cut(s) 224, 644
SseBI AGGCCT 1 cut(s) 1039
SsiI CCGC 2 cut(s) 445, 1372
SspMI CTAG 4 cut(s) 939, 1008, 1044, 1437
StuI AGGCCT 1 cut(s) 1039
StyD4I CCNGG 5 cut(s) 352, 1073, 1145, 1283, 1423
StyI CCWWGG 1 cut(s) 1007
TaaI ACNGT 1 cut(s) 901
TaiI ACGT 2 cut(s) 818, 1476
TasI AATT 2 cut(s) 224, 644
TatI WGTACW 2 cut(s) 896, 1151
TfiI GAWTC 5 cut(s) 53, 403, 559, 573, 592
Tru1I TTAA 2 cut(s) 498, 1446
Tru9I TTAA 2 cut(s) 498, 1446
TscAI CASTG 6 cut(s) 36, 286, 845, 1101, 1359, 1459
TseFI GTSAC 1 cut(s) 1096
Tsp45I GTSAC 1 cut(s) 1096
TspDTI ATGAA 4 cut(s) 126, 753, 808, 1077
TspRI CASTG 6 cut(s) 36, 286, 845, 1101, 1359, 1459
VpaK11BI GGWCC 4 cut(s) 1011, 1203, 1400, 1418
XagI CCTNNNNNAGG 1 cut(s) 925
XapI RAATTY 1 cut(s) 644
XceI RCATGY 2 cut(s) 260, 532
XcmI CCANNNNNNNNNTGG 1 cut(s) 1291
XmaJI CCTAGG 1 cut(s) 1007
XmiI GTMKAC 1 cut(s) 903
XspI CTAG 4 cut(s) 939, 1008, 1044, 1437
Zsp2I ATGCAT 1 cut(s) 530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.