Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0012650

Physical Location & Seq

Genomic Coordinates Reverse (-)

12378955 .. 12385172

Gene Structure 6218 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027522

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2454 bp

ATGGGAAGGAAAGGGAGTTGGTTTTCTGCAGTGAAGAAAGCCCTCAACCCTGAATCCAAGGAAAAGAAAGATCAGAAATCCAAGTCAAAGAAAAATTGGTTTGGGAAAAACAAGAATGTGGATGAGGATTATGAGGAAAATGTAGACCATTTGGAAAATGTAGACCACTTGAAAAATGCAGATCATGTGGAAAACGTAGACCATGTGGATCATGTGGTATCTTCCAAGGAAGAATCTGCATTTGTGATTCCCACTTCTTTTGCGCCACCTCCTCCTCCACCACCTCTTCCTACTCTTCCTCCAATAAAAGAGAAGTTAGAGGAGGGTGAGGATTCACAGAGAACCTCTCTTGCTCTAAAGGAAGATGTCGAATTACTGGAGGCAGAGGATGCTCAGAGCAAGCATGTTTACTCTGTGGCGGTCGCCACAGCAATGGCTGCAGAGGCGGCTGTTGCTGCTGCTCGGGCTGCTGCAGAGGTTGTACGTCTCACTGGGCTGACTCATTTCCCGGGGAAATCTTTGGAGGAGGTAGCAGCCATCAAGATTCAGACGGCATTCCGAGGGCACTTGGCAAGGAGGGCATTACGGGCTTTGAGAGGGTTGGTGAGGTTGAAATCATTGGTAGAGGGTCAATCTGTTAAACGCCAGGCGACTACCACATTAAAATGCATGCAGACTGTTGCTCGTGTACAATCTGAGATTCGTGCAAGGAGGATTAGATTGTCTGAGGAGAATCAGGCGCTTCAGCGACAGATTCAACAGAAACAAGAGAAAGAGTTGAAAGAGATGGAGAAACACAGAGTTGCTTCTATTGGAGACAACTGGAACCATAGCTCCCAATCTAAGGAGGAGGTTGAGGCAAAGCTACAGAGCAGACAAGAGGCTGCTAAGAGAAGAGAAAAGGCCTTGGCTTATTCATTCTCTCATCAGAGAATGTGGAAGAACTCTTTGAAATCTCAACATCCTACGTTCATGGATCCCAGCAATCCCCACTGGGGTTGGAGTTGGTTAGAGAGATGGATGGCTGCAAGACCATGGGAGAGCCAAAGCACATCAGACTACAACGACCGGGCCTCCTTGAGGAGTGCAGCAAGCCGTGCATCAATGTCAGTTGCGGAAATCACCAAAGCTTATGCTCTTCGTGATGTCCACCGCGATAACAAGCCTCCTTCCCCAACTAGCCAAAAATCAAGCCGGCCTCCTAGTCGCCAATCCCCTTCAGGTCTTACCAAGACACCATCTTCATCATGGAGAACCCCAAAGAAGAATGGCTCAGGCGGGAACGAGGACTCCAGAAGTACTTACAGTGTGCAGTCGGAGCGATTCAACAGGAGGCATAGCATTGCAGGGTCCTCAGTAAGAGATGATGAGAGCCTTGCAAGCACGCCTTCAGTTCCTTCTTCAAAAAGATACCTGACATCCACAAGCTCAACGAAGACAAGGTCACGACTGGCAAGCCCGAGCTCATTGGGGTTAGAAAAGAACAGGACACCAACACCAGACAAGGGATCATCACCATCAGTCAGTACTGTAAAGAAGCGGCTATCTTACCCTGCTTCCCCTGCTGGACAAAGGAGGCACTCGGGTCCTCCTAGGGTTGGCGGTAGCTCCCCTAAGGGTGCAGCTCACACAGAGAAGAAAAATGGGTTTGGGGGTGATGCTAGTTCAAGGTACCGGAAACCCGATTTCTTTAGTTGTGTGCAGATTGCTGTGGTCCTGTGGATTCCTCATTTCGGTTCTGTAGTTCTGTGGATTGCTGTTCCTGTGGTTACAGTGGTTCTGTTTGTTAAGATTGGTCAATGCTCACGTCTGATTTCAAGTAGGGAAGAGGAAAACTCACTTCTTCACACTCTTGTGGCCTACGCCTCTAATAATGATAATAAGTTCCATACTGATTTTAAATTTATGTCTTTCAAGAGAATTATATGCTTCTTCAAAAGCATTTTGTTACTTCATTATTATAAGAGGGTTGTCCACATTAGAAAACGAACTAACCTAAACCTTAAAACATGTTCTGGAGAACAAAGAGTCTCTTCCCGAACTCTGGCAACGCCCAAAAGCTTCCAGAAACCTCTGTATGATACCCCGGATTCTAAGCTCAGACACCAAACATTGAACAAAATGGCTACACCATTTCTTGCTGGTCTTGCAGTAGCAGCCACTGCTCTTGCTGGTAGATATGGTATCCAGGCGTGGCAAGCATTCAAGGCACGACCACCTAAAATGCGTAAATTTTTTGAAGGTGGTTTTCAGCCAACTATGACTAGAAGGGAAGCAGCTCAGATTCTTGGTCTCAGGGAGAGTGCGCCCCCAGACAAGGTCAAGGAAGCACATCGAAGAGTGATGGTTGCAAATCATCCTGATGCAGGTGGTAGTCATTACCTTGCTTCTAAAATCAACGAGGCTAAAGATGTGATGCTTAGGAAAACAAAGGGCGGTGGATCAGCATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005856 GO:0005874 GO:0008017 GO:0008092 GO:0015630 GO:0015631 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4005 IQ

Protein Analysis

818

Amino Acids

91.09

Weight (kDa)

10.1

Isoelectric Point (pI)

56.18

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012650)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g20080 FvH4_7g20080
malus_domestica	MD07G1178400.v1.1
prunus_persica	Prupe.2G217600_v2.0.a1 Prupe.2G217600_v2.0.a1 Prupe.2G217600_v2.0.a1 Prupe.2G217600_v2.0.a1
pyrus_communis	pycom01g13920 pycom07g17210
rosa_chinensis	RchiOBHm_Chr1g0364041
rosa_laevigata	RLG00000027522
rosa_multiflora	Rmu_sc0009677.1_g000016
rosa_roxburghii	Rroxscaffold_4G00292710
rosa_rugosa	Rorug01G0313100
rosa_samantha	Rh1AG320400 Rh1BG283600 Rh1CG300000 Rh1DG315100
rosa_wichuraiana	Rw1G028400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1962
AarI	CACCTGC	1 cut(s)	2357
Acc36I	ACCTGC	1 cut(s)	2357
Acc65I	GGTACC	1 cut(s)	1671
AccB1I	GGYRCC	1 cut(s)	1671
AccI	GTMKAC	3 cut(s)	144, 162, 198
AccII	CGCG	1 cut(s)	1155
AciI	CCGC	8 cut(s)	419, 446, 1115, 1153, 1278, 1540, 1602, 2436
AclWI	GGATC	5 cut(s)	216, 971, 984, 1516, 2449
AcsI	RAATTY	2 cut(s)	1901, 2231
AcuI	CTGAAG	3 cut(s)	728, 1203, 1374
AfaI	GTAC	5 cut(s)	483, 690, 1300, 1528, 1673
AfiI	CCNNNNNNNGG	9 cut(s)	844, 995, 1080, 1505, 1598, 1733, 2044, 2317, 2366
AflIII	ACRYGT	1 cut(s)	2009
AjiI	CACGTC	1 cut(s)	1808
AjnI	CCWGG	2 cut(s)	645, 2187
AleI	CACNNNNGTG	1 cut(s)	1853
AloI	GAACNNNNNNTCC	4 cut(s)	818, 850, 1274, 1306
Alw21I	GWGCWC	1 cut(s)	1466
Alw26I	GTCTC	4 cut(s)	491, 810, 2035, 2297
AlwI	GGATC	5 cut(s)	216, 971, 984, 1516, 2449
AlwNI	CAGNNNCTG	1 cut(s)	2162
Ama87I	CYCGRG	4 cut(s)	462, 508, 1459, 1582
AoxI	GGCC	4 cut(s)	903, 1071, 1196, 1857
ApoI	RAATTY	2 cut(s)	1901, 2231
ArsI	GACNNNNNNTTYG	2 cut(s)	1427, 1459
Asp718I	GGTACC	1 cut(s)	1671
AspA2I	CCTAGG	1 cut(s)	1592
AspLEI	GCGC	3 cut(s)	265, 742, 2308
AspS9I	GGNCC	4 cut(s)	1071, 1350, 1586, 1714
AsuC2I	CCSGG	4 cut(s)	509, 510, 1070, 2087
AsuHPI	GGTGA	5 cut(s)	338, 616, 1114, 1506, 1667
AvaI	CYCGRG	4 cut(s)	462, 508, 1459, 1582
AvaII	GGWCC	3 cut(s)	1350, 1586, 1714
AvrII	CCTAGG	1 cut(s)	1592
AxyI	CCTNAGG	1 cut(s)	1614
BaeGI	GKGCMC	1 cut(s)	567
BamHI	GGATCC	1 cut(s)	976
BanI	GGYRCC	1 cut(s)	1671
BanII	GRGCYC	1 cut(s)	1466
BauI	CACGAG	1 cut(s)	684
BbsI	GAAGAC	1 cut(s)	1442
Bbv12I	GWGCWC	1 cut(s)	1466
BccI	CCATC	7 cut(s)	545, 781, 1011, 1015, 1246, 1525, 2338
BceAI	ACGGC	2 cut(s)	567, 1080
BciT130I	CCWGG	2 cut(s)	647, 2189
BciVI	GTATCC	1 cut(s)	2195
BcnI	CCSGG	4 cut(s)	509, 510, 1070, 2087
BcoDI	GTCTC	4 cut(s)	491, 810, 2035, 2297
BfaI	CTAG	5 cut(s)	1179, 1203, 1593, 1662, 2265
BfmI	CTRYAG	5 cut(s)	27, 438, 471, 866, 1740
BfoI	RGCGCY	1 cut(s)	743
BfuAI	ACCTGC	1 cut(s)	2357
BfuI	GTATCC	1 cut(s)	2195
BlnI	CCTAGG	1 cut(s)	1592
BmcAI	AGTACT	2 cut(s)	1300, 1528
Bme1390I	CCNGG	6 cut(s)	509, 510, 647, 1070, 2087, 2189
Bme18I	GGWCC	3 cut(s)	1350, 1586, 1714
BmeT110I	CYCGRG	4 cut(s)	462, 508, 1459, 1582
BmgBI	CACGTC	1 cut(s)	1808
BmgT120I	GGNCC	4 cut(s)	1071, 1350, 1586, 1714
BmiI	GGNNCC	5 cut(s)	827, 978, 1351, 1587, 1673
BmrFI	CCNGG	6 cut(s)	509, 510, 647, 1070, 2087, 2189
BmrI	ACTGGG	2 cut(s)	501, 1003
BmsI	GCATC	5 cut(s)	379, 1109, 1648, 2353, 2406
BmuI	ACTGGG	2 cut(s)	501, 1003
BpiI	GAAGAC	1 cut(s)	1442
BplI	GAGNNNNNCTC	4 cut(s)	331, 363, 1820, 1852
BpmI	CTGGAG	3 cut(s)	398, 1276, 2037
Bpu10I	CCTNAGC	2 cut(s)	1273, 2420
BpuEI	CTTGAG	1 cut(s)	1099
BpuMI	CCSGG	4 cut(s)	509, 510, 1070, 2087
BsaI	GGTCTC	1 cut(s)	2297
BsaJI	CCNNGG	9 cut(s)	57, 225, 508, 509, 559, 906, 1034, 1592, 2085
BsaWI	WCCGGW	1 cut(s)	1674
BsaXI	ACNNNNNCTCC	8 cut(s)	283, 313, 818, 848, 1058, 1088, 1274, 1304
Bsc4I	CCNNNNNNNGG	9 cut(s)	844, 995, 1080, 1505, 1598, 1733, 2044, 2317, 2366
Bse118I	RCCGGY	1 cut(s)	1194
Bse1I	ACTGG	5 cut(s)	381, 496, 827, 998, 1455
Bse21I	CCTNAGG	1 cut(s)	1614
Bse3DI	GCAATG	2 cut(s)	438, 1341
BseBI	CCWGG	2 cut(s)	647, 2189
BseDI	CCNNGG	9 cut(s)	57, 225, 508, 509, 559, 906, 1034, 1592, 2085
BseGI	GGATG	6 cut(s)	127, 394, 961, 1026, 1418, 2356
BseLI	CCNNNNNNNGG	9 cut(s)	844, 995, 1080, 1505, 1598, 1733, 2044, 2317, 2366
BseMI	GCAATG	2 cut(s)	438, 1341
BseMII	CTCAG	8 cut(s)	407, 687, 717, 1287, 1368, 2113, 2294, 2308
BseNI	ACTGG	5 cut(s)	381, 496, 827, 998, 1455
BseRI	GAGGAG	7 cut(s)	261, 264, 335, 539, 743, 863, 1096
BseSI	GKGCMC	1 cut(s)	567
BseYI	CCCAGC	1 cut(s)	980
BsgI	GTGCAG	4 cut(s)	1107, 1331, 1641, 1721
Bsh1236I	CGCG	1 cut(s)	1155
Bsh1285I	CGRYCG	2 cut(s)	423, 1069
BshFI	GGCC	4 cut(s)	905, 1073, 1198, 1859
BshNI	GGYRCC	1 cut(s)	1671
BsiEI	CGRYCG	2 cut(s)	423, 1069
BsiHKAI	GWGCWC	1 cut(s)	1466
BsiHKCI	CYCGRG	4 cut(s)	462, 508, 1459, 1582
BsiSI	CCGG	5 cut(s)	509, 1069, 1195, 1675, 2087
BslI	CCNNNNNNNGG	9 cut(s)	844, 995, 1080, 1505, 1598, 1733, 2044, 2317, 2366
BsmAI	GTCTC	4 cut(s)	491, 810, 2035, 2297
BsmBI	CGTCTC	1 cut(s)	491
BsmI	GAATGC	2 cut(s)	554, 2201
BsnI	GGCC	4 cut(s)	905, 1073, 1198, 1859
Bso31I	GGTCTC	1 cut(s)	2297
BsoBI	CYCGRG	4 cut(s)	462, 508, 1459, 1582
Bsp1286I	GDGCHC	2 cut(s)	567, 1466
Bsp1407I	TGTACA	1 cut(s)	688
Bsp143I	GATC	6 cut(s)	70, 181, 208, 976, 1508, 2441
Bsp19I	CCATGG	1 cut(s)	1034
BspACI	CCGC	8 cut(s)	419, 446, 1115, 1153, 1278, 1540, 1602, 2436
BspANI	GGCC	4 cut(s)	905, 1073, 1198, 1859
BspCNI	CTCAG	8 cut(s)	406, 688, 718, 1286, 1367, 2112, 2293, 2307
BspFNI	CGCG	1 cut(s)	1155
BspLI	GGNNCC	5 cut(s)	827, 978, 1351, 1587, 1673
BspMAI	CTGCAG	3 cut(s)	31, 442, 475
BspMI	ACCTGC	1 cut(s)	2357
BspPI	GGATC	5 cut(s)	216, 971, 984, 1516, 2449
BspQI	GCTCTTC	1 cut(s)	1143
BspT107I	GGYRCC	1 cut(s)	1671
BspTNI	GGTCTC	1 cut(s)	2297
BsrDI	GCAATG	2 cut(s)	438, 1341
BsrFI	RCCGGY	1 cut(s)	1194
BsrGI	TGTACA	1 cut(s)	688
BsrI	ACTGG	5 cut(s)	381, 496, 827, 998, 1455
BssAI	RCCGGY	1 cut(s)	1194
BssECI	CCNNGG	9 cut(s)	57, 225, 508, 509, 559, 906, 1034, 1592, 2085
BssMI	GATC	6 cut(s)	70, 181, 208, 976, 1508, 2441
BssSI	CACGAG	1 cut(s)	684
BssT1I	CCWWGG	5 cut(s)	57, 225, 906, 1034, 1592
Bst2BI	CACGAG	1 cut(s)	684
Bst2UI	CCWGG	2 cut(s)	647, 2189
Bst4CI	ACNGT	4 cut(s)	679, 1307, 1531, 1774
Bst6I	CTCTTC	7 cut(s)	291, 300, 889, 1143, 1821, 2038, 2332
BstAPI	GCANNNNNTGC	4 cut(s)	389, 437, 1097, 2162
BstAUI	TGTACA	1 cut(s)	688
BstC8I	GCNNGC	8 cut(s)	401, 671, 1093, 1196, 1381, 1385, 1456, 2199
BstDSI	CCRYGG	1 cut(s)	1034
BstENI	CCTNNNNNAGG	2 cut(s)	1078, 2364
BstF5I	GGATG	6 cut(s)	127, 394, 961, 1026, 1418, 2356
BstFNI	CGCG	1 cut(s)	1155
BstH2I	RGCGCY	1 cut(s)	743
BstHHI	GCGC	3 cut(s)	265, 742, 2308
BstKTI	GATC	6 cut(s)	73, 184, 211, 979, 1511, 2444
BstMAI	GTCTC	4 cut(s)	491, 810, 2035, 2297
BstMBI	GATC	6 cut(s)	70, 181, 208, 976, 1508, 2441
BstMCI	CGRYCG	2 cut(s)	423, 1069
BstNI	CCWGG	2 cut(s)	647, 2189
BstNSI	RCATGY	3 cut(s)	407, 673, 2013
BstSCI	CCNGG	6 cut(s)	507, 508, 645, 1068, 2085, 2187
BstSFI	CTRYAG	5 cut(s)	27, 438, 471, 866, 1740
BstSLI	GKGCMC	1 cut(s)	567
BstUI	CGCG	1 cut(s)	1155
BstV2I	GAAGAC	1 cut(s)	1442
BstX2I	RGATCY	1 cut(s)	976
BstXI	CCANNNNNNTGG	1 cut(s)	433
BstYI	RGATCY	1 cut(s)	976
Bsu36I	CCTNAGG	1 cut(s)	1614
BsuI	GTATCC	1 cut(s)	2195
BsuRI	GGCC	4 cut(s)	905, 1073, 1198, 1859
BtgI	CCRYGG	1 cut(s)	1034
BtrI	CACGTC	1 cut(s)	1808
BtsCI	GGATG	6 cut(s)	127, 394, 961, 1026, 1418, 2356
BtsI	GCAGTG	2 cut(s)	36, 2160
BtsIMutI	CAGTG	6 cut(s)	36, 489, 991, 1312, 1779, 2160
BveI	ACCTGC	1 cut(s)	2357
Cac8I	GCNNGC	8 cut(s)	401, 671, 1093, 1196, 1381, 1385, 1456, 2199
CaiI	CAGNNNCTG	1 cut(s)	2162
CfoI	GCGC	3 cut(s)	265, 742, 2308
Cfr10I	RCCGGY	1 cut(s)	1194
Cfr13I	GGNCC	4 cut(s)	1071, 1350, 1586, 1714
Cfr9I	CCCGGG	1 cut(s)	508
Csp6I	GTAC	5 cut(s)	482, 689, 1299, 1527, 1672
CspCI	CAANNNNNGTGG	6 cut(s)	241, 276, 980, 1015, 2149, 2184
CviAII	CATG	9 cut(s)	185, 203, 212, 404, 670, 973, 1035, 1248, 2010
CviQI	GTAC	5 cut(s)	482, 689, 1299, 1527, 1672
DpnI	GATC	6 cut(s)	72, 183, 210, 978, 1510, 2443
DpnII	GATC	6 cut(s)	70, 181, 208, 976, 1508, 2441
DraI	TTTAAA	1 cut(s)	1900
Eam1104I	CTCTTC	7 cut(s)	291, 300, 889, 1143, 1821, 2038, 2332
EarI	CTCTTC	7 cut(s)	291, 300, 889, 1143, 1821, 2038, 2332
Ecl136II	GAGCTC	1 cut(s)	1464
Eco130I	CCWWGG	5 cut(s)	57, 225, 906, 1034, 1592
Eco147I	AGGCCT	1 cut(s)	905
Eco24I	GRGCYC	1 cut(s)	1466
Eco31I	GGTCTC	1 cut(s)	2297
Eco47I	GGWCC	3 cut(s)	1350, 1586, 1714
Eco53kI	GAGCTC	1 cut(s)	1464
Eco57I	CTGAAG	3 cut(s)	728, 1203, 1374
Eco81I	CCTNAGG	1 cut(s)	1614
Eco88I	CYCGRG	4 cut(s)	462, 508, 1459, 1582
EcoICRI	GAGCTC	1 cut(s)	1464
EcoNI	CCTNNNNNAGG	2 cut(s)	1078, 2364
EcoO109I	RGGNCCY	2 cut(s)	1350, 1586
EcoRII	CCWGG	2 cut(s)	645, 2187
EcoT14I	CCWWGG	5 cut(s)	57, 225, 906, 1034, 1592
EcoT22I	ATGCAT	1 cut(s)	671
EcoT38I	GRGCYC	1 cut(s)	1466
ErhI	CCWWGG	5 cut(s)	57, 225, 906, 1034, 1592
Esp3I	CGTCTC	1 cut(s)	491
FaeI	CATG	9 cut(s)	188, 206, 215, 407, 673, 976, 1038, 1251, 2013
FalI	AAGNNNNNCTT	4 cut(s)	1372, 1404, 2017, 2049
FatI	CATG	9 cut(s)	184, 202, 211, 403, 669, 972, 1034, 1247, 2009
FauI	CCCGC	1 cut(s)	1271
FblI	GTMKAC	3 cut(s)	144, 162, 198
FokI	GGATG	6 cut(s)	134, 401, 948, 1033, 1405, 2343
FriOI	GRGCYC	1 cut(s)	1466
FspBI	CTAG	5 cut(s)	1179, 1203, 1593, 1662, 2265
GlaI	GCGC	3 cut(s)	264, 741, 2307
GsaI	CCCAGC	1 cut(s)	984
GsuI	CTGGAG	3 cut(s)	398, 1276, 2037
HaeII	RGCGCY	1 cut(s)	743
HaeIII	GGCC	4 cut(s)	905, 1073, 1198, 1859
HapII	CCGG	5 cut(s)	509, 1069, 1195, 1675, 2087
HhaI	GCGC	3 cut(s)	265, 742, 2308
Hin1II	CATG	9 cut(s)	188, 206, 215, 407, 673, 976, 1038, 1251, 2013
Hin6I	GCGC	3 cut(s)	263, 740, 2306
HinP1I	GCGC	3 cut(s)	263, 740, 2306
HindIII	AAGCTT	2 cut(s)	1128, 2059
HpaII	CCGG	5 cut(s)	509, 1069, 1195, 1675, 2087
HphI	GGTGA	5 cut(s)	338, 616, 1114, 1506, 1667
Hpy166II	GTNNAC	7 cut(s)	145, 163, 199, 409, 689, 1150, 1975
Hpy188III	TCNNGA	9 cut(s)	541, 1142, 1293, 1446, 1915, 2016, 2037, 2065, 2360
Hpy8I	GTNNAC	7 cut(s)	145, 163, 199, 409, 689, 1150, 1975
HpyAV	CCTTC	6 cut(s)	1179, 1227, 1398, 1407, 2234, 2262
HpyCH4III	ACNGT	4 cut(s)	679, 1307, 1531, 1774
HpyCH4IV	ACGT	4 cut(s)	195, 484, 968, 1807
HpySE526I	ACGT	4 cut(s)	195, 484, 968, 1807
Hsp92II	CATG	9 cut(s)	188, 206, 215, 407, 673, 976, 1038, 1251, 2013
HspAI	GCGC	3 cut(s)	263, 740, 2306
KpnI	GGTACC	1 cut(s)	1675
KroI	GCCGGC	1 cut(s)	1194
KroNI	GCCGGC	1 cut(s)	1196
Kzo9I	GATC	6 cut(s)	70, 181, 208, 976, 1508, 2441
LguI	GCTCTTC	1 cut(s)	1143
LmnI	GCTCC	3 cut(s)	839, 1318, 1613
LweI	GCATC	5 cut(s)	379, 1109, 1648, 2353, 2406
MaeI	CTAG	5 cut(s)	1179, 1203, 1593, 1662, 2265
MaeII	ACGT	4 cut(s)	195, 484, 968, 1807
MaeIII	GTNAC	3 cut(s)	1443, 1768, 1947
MalI	GATC	6 cut(s)	72, 183, 210, 978, 1510, 2443
MboI	GATC	6 cut(s)	70, 181, 208, 976, 1508, 2441
MflI	RGATCY	1 cut(s)	976
MhlI	GDGCHC	2 cut(s)	567, 1466
MluCI	AATT	5 cut(s)	94, 371, 1901, 1920, 2231
MlyI	GAGTC	3 cut(s)	493, 1283, 2037
MmeI	TCCRAC	2 cut(s)	980, 1296
Mph1103I	ATGCAT	1 cut(s)	671
MroNI	GCCGGC	1 cut(s)	1194
MseI	TTAA	5 cut(s)	639, 662, 1788, 1899, 2004
MslI	CAYNNNNRTG	4 cut(s)	431, 664, 1853, 2361
MspI	CCGG	5 cut(s)	509, 1069, 1195, 1675, 2087
MspR9I	CCNGG	6 cut(s)	509, 510, 647, 1070, 2087, 2189
Mva1269I	GAATGC	2 cut(s)	554, 2201
MvaI	CCWGG	2 cut(s)	647, 2189
MvnI	CGCG	1 cut(s)	1155
NaeI	GCCGGC	1 cut(s)	1196
NciI	CCSGG	4 cut(s)	509, 510, 1070, 2087
NcoI	CCATGG	1 cut(s)	1034
NdeII	GATC	6 cut(s)	70, 181, 208, 976, 1508, 2441
NgoMIV	GCCGGC	1 cut(s)	1194
NlaIII	CATG	9 cut(s)	188, 206, 215, 407, 673, 976, 1038, 1251, 2013
NlaIV	GGNNCC	5 cut(s)	827, 978, 1351, 1587, 1673
NmuCI	GTSAC	1 cut(s)	1443
NsiI	ATGCAT	1 cut(s)	671
NspI	RCATGY	3 cut(s)	407, 673, 2013
OliI	CACNNNNGTG	1 cut(s)	1853
PaeI	GCATGC	1 cut(s)	673
PaqCI	CACCTGC	1 cut(s)	2357
PceI	AGGCCT	1 cut(s)	905
PciI	ACATGT	1 cut(s)	2009
PciSI	GCTCTTC	1 cut(s)	1143
PctI	GAATGC	2 cut(s)	554, 2201
PdiI	GCCGGC	1 cut(s)	1196
PflFI	GACNNNGTC	2 cut(s)	1441, 2318
PleI	GAGTC	3 cut(s)	493, 1283, 2036
PpsI	GAGTC	3 cut(s)	493, 1283, 2036
PpuMI	RGGWCCY	2 cut(s)	1350, 1586
PscI	ACATGT	1 cut(s)	2009
PsiI	TTATAA	1 cut(s)	1962
Psp124BI	GAGCTC	1 cut(s)	1466
Psp5II	RGGWCCY	2 cut(s)	1350, 1586
Psp6I	CCWGG	2 cut(s)	645, 2187
PspFI	CCCAGC	1 cut(s)	980
PspGI	CCWGG	2 cut(s)	645, 2187
PspN4I	GGNNCC	5 cut(s)	827, 978, 1351, 1587, 1673
PspPI	GGNCC	4 cut(s)	1071, 1350, 1586, 1714
PspPPI	RGGWCCY	2 cut(s)	1350, 1586
PstI	CTGCAG	3 cut(s)	31, 442, 475
PstNI	CAGNNNCTG	1 cut(s)	2162
PsuI	RGATCY	1 cut(s)	976
PsyI	GACNNNGTC	2 cut(s)	1441, 2318
RsaI	GTAC	5 cut(s)	483, 690, 1300, 1528, 1673
RsaNI	GTAC	5 cut(s)	482, 689, 1299, 1527, 1672
RseI	CAYNNNNRTG	4 cut(s)	431, 664, 1853, 2361
SacI	GAGCTC	1 cut(s)	1466
SapI	GCTCTTC	1 cut(s)	1143
SaqAI	TTAA	5 cut(s)	639, 662, 1788, 1899, 2004
Sau3AI	GATC	6 cut(s)	70, 181, 208, 976, 1508, 2441
Sau96I	GGNCC	4 cut(s)	1071, 1350, 1586, 1714
ScaI	AGTACT	2 cut(s)	1300, 1528
SchI	GAGTC	3 cut(s)	493, 1283, 2037
ScrFI	CCNGG	6 cut(s)	509, 510, 647, 1070, 2087, 2189
SduI	GDGCHC	2 cut(s)	567, 1466
SfaNI	GCATC	5 cut(s)	379, 1109, 1648, 2353, 2406
SfcI	CTRYAG	5 cut(s)	27, 438, 471, 866, 1740
SinI	GGWCC	3 cut(s)	1350, 1586, 1714
SmaI	CCCGGG	1 cut(s)	510
SmiMI	CAYNNNNRTG	4 cut(s)	431, 664, 1853, 2361
SmlI	CTYRAG	1 cut(s)	1078
SmoI	CTYRAG	1 cut(s)	1078
SphI	GCATGC	1 cut(s)	673
Sse9I	AATT	5 cut(s)	94, 371, 1901, 1920, 2231
SseBI	AGGCCT	1 cut(s)	905
SsiI	CCGC	8 cut(s)	419, 446, 1115, 1153, 1278, 1540, 1602, 2436
SspMI	CTAG	5 cut(s)	1179, 1203, 1593, 1662, 2265
SstI	GAGCTC	1 cut(s)	1466
StuI	AGGCCT	1 cut(s)	905
StyD4I	CCNGG	6 cut(s)	507, 508, 645, 1068, 2085, 2187
StyI	CCWWGG	5 cut(s)	57, 225, 906, 1034, 1592
TaaI	ACNGT	4 cut(s)	679, 1307, 1531, 1774
TaiI	ACGT	4 cut(s)	198, 487, 971, 1810
TaqI	TCGA	2 cut(s)	369, 2335
TasI	AATT	5 cut(s)	94, 371, 1901, 1920, 2231
TatI	WGTACW	3 cut(s)	688, 1298, 1526
TauI	GCSGC	2 cut(s)	449, 1543
Tru1I	TTAA	5 cut(s)	639, 662, 1788, 1899, 2004
Tru9I	TTAA	5 cut(s)	639, 662, 1788, 1899, 2004
TscAI	CASTG	6 cut(s)	36, 496, 998, 1312, 1779, 2167
TseFI	GTSAC	1 cut(s)	1443
Tsp45I	GTSAC	1 cut(s)	1443
TspDTI	ATGAA	4 cut(s)	906, 961, 1233, 1943
TspMI	CCCGGG	1 cut(s)	508
TspRI	CASTG	6 cut(s)	36, 496, 998, 1312, 1779, 2167
Tth111I	GACNNNGTC	2 cut(s)	1441, 2318
VpaK11BI	GGWCC	3 cut(s)	1350, 1586, 1714
XagI	CCTNNNNNAGG	2 cut(s)	1078, 2364
XapI	RAATTY	2 cut(s)	1901, 2231
XceI	RCATGY	3 cut(s)	407, 673, 2013
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1245
XmaI	CCCGGG	1 cut(s)	508
XmaJI	CCTAGG	1 cut(s)	1592
XmiI	GTMKAC	3 cut(s)	144, 162, 198
XspI	CTAG	5 cut(s)	1179, 1203, 1593, 1662, 2265
ZrmI	AGTACT	2 cut(s)	1300, 1528
Zsp2I	ATGCAT	1 cut(s)	671

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.