Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0012650

Physical Location & Seq

Genomic Coordinates Reverse (-)

12926857 .. 12933557

Gene Structure 6701 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00292710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1770 bp

ATGAAGCTCCCCACCCACATCGATGCCCCCGGCCACGTCTTCGACCTTCGTTTTTCTTCACGGGGAGATAGAAGGAAGTTCCCAAAACTCGAGCACATCTGGGAAGTTCAAGCAGAGGAAATGGGGAGGAAAGGGAGTTGGTTTTCTGCAGTGAAGAAAGCCCTCAACCCTGAATCCAAGGAAAAGAAAGATCAGAAATCCAAGTCAAAGAAAAAATGGTTTGGGAAAAACAAGAATGTGGATGAGGATTATGAGGAAAACGTAGACCACTTGAAAAATGCAGATCATGTGGAGAACGTAGACCATGTGGATCATGTGGTATCTTCCAAGGAAGAATCTGCATTTGTGATTCCCACTTCTTTTGCGCCACCTCCTCCTCCACCACCTCTTCCTACTCTTCCTCCAATAAAAGAGAAGTTAGAGGAGGGTGAGGATTCACAGAGAACCTCTCTTGCTCTAAAGGAAGATGTCGAATTACTGGAGGCAGAGGATGCTCAGAGCAAGCATGTTTACTCTGTGGCGGTCGCCACAGCAATGGCTGCAGAGGCGGCTGTTGCTGCTGCTCGGGCTGCCGCAGAGGTTGTACGGCTCAGTGGGCTGACTCATTTCCCGGGGAAATCTTTGGAGGAGGTAGCAGCCATCAAGATTCAGACGGCATTCCGAGGGCACTTGGCAAGGAGGGCATTACGGGCTTTGAGAGGGTTGGTGAGGTTGAAATCATTGGTAGAGGGTCAATCTGTTAAACGCCAGGCGACTACCACATTAAAATGCATGCAGACCGTTGCTCGTGTACAATCTGAGATTCGTGCAAGGAGGATTAGAATGTCTGAGGAGAATCAGGCGCTTCAGCGACAGATTCAACAGAAACAAGAGAAAGAGTTGAAAGAGATGGAGAAACACAGAGTTGCTTCTATTGGAGACAACTGGAACCATAGCCCCCAATCTAAGGAGGAGGTTGAGGCAAAGCTACAGAGCAGACAAGAGGCTGCTAAGAGAAGAGAAAAGGCCTTGGCTTATTCATTCTCTCATCAGAGAATGTGGAAGAACTCTTCGAAATCTCAACATCCTACGTTCATGGATCCCAGCAATCCCCACTGGGGTTGGAGTTGGTTAGAGAGATGGATGGCTGCAAGACCATGGGAGAGCCAAAGCACATCAGACTACAACGACCGGGCCTCCTTGAGGAGTGCAGCAAGCCGTGCATCAATGTCAGTTGCGGAAATCACCAAAGCTTATGCTCTTCGTGATGTCCACCGCGATAACAAGCCTCCTTCCCCAACTGGCCAAAAATCAAGCCGGCCTCCTAGTCGCCAATCCCCTTCAGCTCTTACCAAGACACCATCTTCATCATGGAGAACCCCAAAAAAGAATGGCTCAGGCGGGGATGAGGACTCCAAAAGTACTTACAGTGTGCAGTCGGAGCGATTCAACAGGAGGCATAGCATTGCAGGGTCCTCAGTAAGAGATGATGAGAGCCTTGCAAGCACGCCTTCAGTTCCTTCTTCAAAAAGATACCTGACACCCACAAGCTCAACGAAGACAAGGTCACGACTGGCAAGCCCGAGCTCATCGGGGTTAGAAAAGAACAGGACACCAACACCAGACAAGGGATCATCACCATCAGTCAGTTCTGTAAAGAAGCGGCTGTCTTACCCTGCTTCCCCTGCTGGACAAAGGAGGCACTCGGGTCCTCCTAGGGTTGGCGGTAGCTCCCCTAAGGGTGCAGCTCACACAGAGAAGAAAGTTAGCAATGGTTGGCGAAGCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005856 GO:0005874 GO:0008017 GO:0008092 GO:0015630 GO:0015631 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4005 IQ

Protein Analysis

589

Amino Acids

65.65

Weight (kDa)

10.02

Isoelectric Point (pI)

65.63

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012650)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g20080 FvH4_7g20080
malus_domestica	MD07G1178400.v1.1
prunus_persica	Prupe.2G217600_v2.0.a1 Prupe.2G217600_v2.0.a1 Prupe.2G217600_v2.0.a1 Prupe.2G217600_v2.0.a1
pyrus_communis	pycom01g13920 pycom07g17210
rosa_chinensis	RchiOBHm_Chr1g0364041
rosa_laevigata	RLG00000027522
rosa_multiflora	Rmu_sc0009677.1_g000016
rosa_roxburghii	Rroxscaffold_4G00292710
rosa_rugosa	Rorug01G0313100
rosa_samantha	Rh1AG320400 Rh1BG283600 Rh1CG300000 Rh1DG315100
rosa_wichuraiana	Rw1G028400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	264, 300
AccII	CGCG	1 cut(s)	1257
AciI	CCGC	8 cut(s)	521, 548, 573, 1217, 1255, 1380, 1642, 1704
AclWI	GGATC	4 cut(s)	318, 1073, 1086, 1618
AcoI	YGGCCR	2 cut(s)	31, 1282
AcuI	CTGAAG	3 cut(s)	830, 1305, 1476
AfaI	GTAC	3 cut(s)	585, 792, 1402
AfiI	CCNNNNNNNGG	5 cut(s)	946, 1097, 1182, 1607, 1700
AgsI	TTSAA	7 cut(s)	110, 274, 715, 860, 883, 1429, 1506
AjiI	CACGTC	1 cut(s)	37
AjnI	CCWGG	1 cut(s)	747
AluBI	AGCT	8 cut(s)	7, 967, 1232, 1325, 1530, 1566, 1710, 1727
AluI	AGCT	8 cut(s)	7, 967, 1232, 1325, 1530, 1566, 1710, 1727
Alw21I	GWGCWC	2 cut(s)	96, 1568
Alw26I	GTCTC	1 cut(s)	912
AlwI	GGATC	4 cut(s)	318, 1073, 1086, 1618
Ama87I	CYCGRG	5 cut(s)	89, 564, 610, 1561, 1684
AoxI	GGCC	5 cut(s)	31, 1005, 1173, 1282, 1298
ApeKI	GCWGC	9 cut(s)	539, 557, 560, 569, 635, 986, 1127, 1190, 1724
ArsI	GACNNNNNNTTYG	2 cut(s)	1529, 1561
AspA2I	CCTAGG	1 cut(s)	1694
AspLEI	GCGC	2 cut(s)	367, 844
AspS9I	GGNCC	3 cut(s)	1173, 1452, 1688
AsuC2I	CCSGG	4 cut(s)	30, 611, 612, 1172
AsuHPI	GGTGA	4 cut(s)	440, 718, 1216, 1608
AsuII	TTCGAA	1 cut(s)	1052
AvaI	CYCGRG	5 cut(s)	89, 564, 610, 1561, 1684
AvaII	GGWCC	2 cut(s)	1452, 1688
AvrII	CCTAGG	1 cut(s)	1694
AxyI	CCTNAGG	1 cut(s)	1716
BaeGI	GKGCMC	1 cut(s)	669
BalI	TGGCCA	1 cut(s)	1284
BamHI	GGATCC	1 cut(s)	1078
BanII	GRGCYC	1 cut(s)	1568
BauI	CACGAG	1 cut(s)	786
BbsI	GAAGAC	2 cut(s)	31, 1544
Bbv12I	GWGCWC	2 cut(s)	96, 1568
BbvI	GCAGC	9 cut(s)	526, 544, 547, 556, 647, 973, 1114, 1202, 1736
BccI	CCATC	6 cut(s)	647, 883, 1113, 1117, 1348, 1627
BceAI	ACGGC	3 cut(s)	602, 669, 1182
BciT130I	CCWGG	1 cut(s)	749
BcnI	CCSGG	4 cut(s)	30, 611, 612, 1172
BcoDI	GTCTC	1 cut(s)	912
BfaI	CTAG	2 cut(s)	1305, 1695
BfmI	CTRYAG	3 cut(s)	147, 540, 968
BfoI	RGCGCY	1 cut(s)	845
BlnI	CCTAGG	1 cut(s)	1694
BmcAI	AGTACT	1 cut(s)	1402
Bme1390I	CCNGG	5 cut(s)	30, 611, 612, 749, 1172
Bme18I	GGWCC	2 cut(s)	1452, 1688
BmeT110I	CYCGRG	5 cut(s)	89, 564, 610, 1561, 1684
BmgBI	CACGTC	1 cut(s)	37
BmgT120I	GGNCC	3 cut(s)	1173, 1452, 1688
BmiI	GGNNCC	4 cut(s)	929, 1080, 1453, 1689
BmrFI	CCNGG	5 cut(s)	30, 611, 612, 749, 1172
BmrI	ACTGGG	1 cut(s)	1105
BmsI	GCATC	3 cut(s)	13, 481, 1211
BmuI	ACTGGG	1 cut(s)	1105
BpiI	GAAGAC	2 cut(s)	31, 1544
BplI	GAGNNNNNCTC	2 cut(s)	433, 465
BpmI	CTGGAG	1 cut(s)	500
Bpu10I	CCTNAGC	1 cut(s)	1375
Bpu14I	TTCGAA	1 cut(s)	1052
BpuEI	CTTGAG	1 cut(s)	1201
BpuMI	CCSGG	4 cut(s)	30, 611, 612, 1172
Bsa29I	ATCGAT	1 cut(s)	21
BsaJI	CCNNGG	9 cut(s)	28, 177, 327, 610, 611, 661, 1008, 1136, 1694
BsaXI	ACNNNNNCTCC	4 cut(s)	385, 415, 1160, 1190
Bsc4I	CCNNNNNNNGG	5 cut(s)	946, 1097, 1182, 1607, 1700
Bse118I	RCCGGY	1 cut(s)	1296
Bse1I	ACTGG	5 cut(s)	483, 929, 1100, 1285, 1557
Bse21I	CCTNAGG	1 cut(s)	1716
Bse3DI	GCAATG	3 cut(s)	540, 1443, 1756
BseBI	CCWGG	1 cut(s)	749
BseCI	ATCGAT	1 cut(s)	21
BseDI	CCNNGG	9 cut(s)	28, 177, 327, 610, 611, 661, 1008, 1136, 1694
BseGI	GGATG	5 cut(s)	247, 496, 1063, 1128, 1390
BseLI	CCNNNNNNNGG	5 cut(s)	946, 1097, 1182, 1607, 1700
BseMI	GCAATG	3 cut(s)	540, 1443, 1756
BseMII	CTCAG	6 cut(s)	509, 604, 789, 819, 1389, 1470
BseNI	ACTGG	5 cut(s)	483, 929, 1100, 1285, 1557
BseRI	GAGGAG	7 cut(s)	363, 366, 437, 641, 845, 965, 1198
BseSI	GKGCMC	1 cut(s)	669
BseXI	GCAGC	9 cut(s)	526, 544, 547, 556, 647, 973, 1114, 1202, 1736
BseYI	CCCAGC	1 cut(s)	1082
BsgI	GTGCAG	3 cut(s)	1209, 1433, 1743
Bsh1236I	CGCG	1 cut(s)	1257
Bsh1285I	CGRYCG	2 cut(s)	525, 1171
BshFI	GGCC	5 cut(s)	33, 1007, 1175, 1284, 1300
BshVI	ATCGAT	1 cut(s)	21
BsiEI	CGRYCG	2 cut(s)	525, 1171
BsiHKAI	GWGCWC	2 cut(s)	96, 1568
BsiHKCI	CYCGRG	5 cut(s)	89, 564, 610, 1561, 1684
BsiSI	CCGG	4 cut(s)	30, 611, 1171, 1297
BslI	CCNNNNNNNGG	5 cut(s)	946, 1097, 1182, 1607, 1700
BsmAI	GTCTC	1 cut(s)	912
BsmI	GAATGC	1 cut(s)	656
BsnI	GGCC	5 cut(s)	33, 1007, 1175, 1284, 1300
BsoBI	CYCGRG	5 cut(s)	89, 564, 610, 1561, 1684
Bsp119I	TTCGAA	1 cut(s)	1052
Bsp1286I	GDGCHC	3 cut(s)	96, 669, 1568
Bsp1407I	TGTACA	1 cut(s)	790
Bsp143I	GATC	5 cut(s)	190, 283, 310, 1078, 1610
Bsp19I	CCATGG	1 cut(s)	1136
BspACI	CCGC	8 cut(s)	521, 548, 573, 1217, 1255, 1380, 1642, 1704
BspANI	GGCC	5 cut(s)	33, 1007, 1175, 1284, 1300
BspCNI	CTCAG	6 cut(s)	508, 603, 790, 820, 1388, 1469
BspDI	ATCGAT	1 cut(s)	21
BspFNI	CGCG	1 cut(s)	1257
BspLI	GGNNCC	4 cut(s)	929, 1080, 1453, 1689
BspMAI	CTGCAG	2 cut(s)	151, 544
BspPI	GGATC	4 cut(s)	318, 1073, 1086, 1618
BspQI	GCTCTTC	1 cut(s)	1245
BspT104I	TTCGAA	1 cut(s)	1052
BsrDI	GCAATG	3 cut(s)	540, 1443, 1756
BsrFI	RCCGGY	1 cut(s)	1296
BsrGI	TGTACA	1 cut(s)	790
BsrI	ACTGG	5 cut(s)	483, 929, 1100, 1285, 1557
BssAI	RCCGGY	1 cut(s)	1296
BssECI	CCNNGG	9 cut(s)	28, 177, 327, 610, 611, 661, 1008, 1136, 1694
BssMI	GATC	5 cut(s)	190, 283, 310, 1078, 1610
BssSI	CACGAG	1 cut(s)	786
BssT1I	CCWWGG	5 cut(s)	177, 327, 1008, 1136, 1694
Bst2BI	CACGAG	1 cut(s)	786
Bst2UI	CCWGG	1 cut(s)	749
Bst4CI	ACNGT	2 cut(s)	781, 1409
Bst6I	CTCTTC	5 cut(s)	393, 402, 991, 1054, 1245
BstAPI	GCANNNNNTGC	3 cut(s)	491, 539, 1199
BstAUI	TGTACA	1 cut(s)	790
BstBI	TTCGAA	1 cut(s)	1052
BstC8I	GCNNGC	7 cut(s)	503, 773, 1195, 1298, 1483, 1487, 1558
BstDEI	CTNAG	9 cut(s)	495, 590, 798, 828, 945, 990, 1375, 1456, 1716
BstDSI	CCRYGG	1 cut(s)	1136
BstENI	CCTNNNNNAGG	1 cut(s)	1180
BstF5I	GGATG	5 cut(s)	247, 496, 1063, 1128, 1390
BstFNI	CGCG	1 cut(s)	1257
BstH2I	RGCGCY	1 cut(s)	845
BstHHI	GCGC	2 cut(s)	367, 844
BstKTI	GATC	5 cut(s)	193, 286, 313, 1081, 1613
BstMAI	GTCTC	1 cut(s)	912
BstMBI	GATC	5 cut(s)	190, 283, 310, 1078, 1610
BstMCI	CGRYCG	2 cut(s)	525, 1171
BstNI	CCWGG	1 cut(s)	749
BstNSI	RCATGY	2 cut(s)	509, 775
BstSCI	CCNGG	5 cut(s)	28, 609, 610, 747, 1170
BstSFI	CTRYAG	3 cut(s)	147, 540, 968
BstSLI	GKGCMC	1 cut(s)	669
BstUI	CGCG	1 cut(s)	1257
BstV1I	GCAGC	9 cut(s)	526, 544, 547, 556, 647, 973, 1114, 1202, 1736
BstV2I	GAAGAC	2 cut(s)	31, 1544
BstX2I	RGATCY	1 cut(s)	1078
BstXI	CCANNNNNNTGG	1 cut(s)	535
BstYI	RGATCY	1 cut(s)	1078
Bsu15I	ATCGAT	1 cut(s)	21
Bsu36I	CCTNAGG	1 cut(s)	1716
BsuRI	GGCC	5 cut(s)	33, 1007, 1175, 1284, 1300
BsuTUI	ATCGAT	1 cut(s)	21
BtgI	CCRYGG	1 cut(s)	1136
BtrI	CACGTC	1 cut(s)	37
BtsCI	GGATG	5 cut(s)	247, 496, 1063, 1128, 1390
BtsI	GCAGTG	1 cut(s)	156
BtsIMutI	CAGTG	4 cut(s)	156, 598, 1093, 1414
Cac8I	GCNNGC	7 cut(s)	503, 773, 1195, 1298, 1483, 1487, 1558
CfoI	GCGC	2 cut(s)	367, 844
Cfr10I	RCCGGY	1 cut(s)	1296
Cfr13I	GGNCC	3 cut(s)	1173, 1452, 1688
Cfr9I	CCCGGG	1 cut(s)	610
ClaI	ATCGAT	1 cut(s)	21
Csp6I	GTAC	3 cut(s)	584, 791, 1401
CspCI	CAANNNNNGTGG	4 cut(s)	343, 378, 1082, 1117
CviAII	CATG	8 cut(s)	287, 305, 314, 506, 772, 1075, 1137, 1350
CviQI	GTAC	3 cut(s)	584, 791, 1401
DdeI	CTNAG	9 cut(s)	495, 590, 798, 828, 945, 990, 1375, 1456, 1716
DpnI	GATC	5 cut(s)	192, 285, 312, 1080, 1612
DpnII	GATC	5 cut(s)	190, 283, 310, 1078, 1610
EaeI	YGGCCR	2 cut(s)	31, 1282
Eam1104I	CTCTTC	5 cut(s)	393, 402, 991, 1054, 1245
EarI	CTCTTC	5 cut(s)	393, 402, 991, 1054, 1245
Ecl136II	GAGCTC	1 cut(s)	1566
Eco130I	CCWWGG	5 cut(s)	177, 327, 1008, 1136, 1694
Eco147I	AGGCCT	1 cut(s)	1007
Eco24I	GRGCYC	1 cut(s)	1568
Eco47I	GGWCC	2 cut(s)	1452, 1688
Eco53kI	GAGCTC	1 cut(s)	1566
Eco57I	CTGAAG	3 cut(s)	830, 1305, 1476
Eco81I	CCTNAGG	1 cut(s)	1716
Eco88I	CYCGRG	5 cut(s)	89, 564, 610, 1561, 1684
EcoICRI	GAGCTC	1 cut(s)	1566
EcoNI	CCTNNNNNAGG	1 cut(s)	1180
EcoO109I	RGGNCCY	2 cut(s)	1452, 1688
EcoRII	CCWGG	1 cut(s)	747
EcoT14I	CCWWGG	5 cut(s)	177, 327, 1008, 1136, 1694
EcoT22I	ATGCAT	1 cut(s)	773
EcoT38I	GRGCYC	1 cut(s)	1568
ErhI	CCWWGG	5 cut(s)	177, 327, 1008, 1136, 1694
FaeI	CATG	8 cut(s)	290, 308, 317, 509, 775, 1078, 1140, 1353
FalI	AAGNNNNNCTT	2 cut(s)	1474, 1506
FatI	CATG	8 cut(s)	286, 304, 313, 505, 771, 1074, 1136, 1349
FauI	CCCGC	1 cut(s)	1373
FblI	GTMKAC	2 cut(s)	264, 300
FokI	GGATG	5 cut(s)	254, 503, 1050, 1135, 1397
FriOI	GRGCYC	1 cut(s)	1568
FspBI	CTAG	2 cut(s)	1305, 1695
GlaI	GCGC	2 cut(s)	366, 843
GsaI	CCCAGC	1 cut(s)	1086
GsuI	CTGGAG	1 cut(s)	500
HaeII	RGCGCY	1 cut(s)	845
HaeIII	GGCC	5 cut(s)	33, 1007, 1175, 1284, 1300
HapII	CCGG	4 cut(s)	30, 611, 1171, 1297
HhaI	GCGC	2 cut(s)	367, 844
Hin1II	CATG	8 cut(s)	290, 308, 317, 509, 775, 1078, 1140, 1353
Hin6I	GCGC	2 cut(s)	365, 842
HinP1I	GCGC	2 cut(s)	365, 842
HindIII	AAGCTT	1 cut(s)	1230
HpaII	CCGG	4 cut(s)	30, 611, 1171, 1297
HphI	GGTGA	4 cut(s)	440, 718, 1216, 1608
Hpy166II	GTNNAC	5 cut(s)	265, 301, 511, 791, 1252
Hpy188I	TCNGA	9 cut(s)	195, 498, 651, 662, 799, 829, 1032, 1159, 1420
Hpy188III	TCNNGA	3 cut(s)	643, 1244, 1548
Hpy8I	GTNNAC	5 cut(s)	265, 301, 511, 791, 1252
HpyAV	CCTTC	6 cut(s)	56, 66, 1281, 1329, 1500, 1509
HpyCH4III	ACNGT	2 cut(s)	781, 1409
HpyCH4IV	ACGT	4 cut(s)	36, 261, 297, 1070
HpyF3I	CTNAG	9 cut(s)	495, 590, 798, 828, 945, 990, 1375, 1456, 1716
HpySE526I	ACGT	4 cut(s)	36, 261, 297, 1070
Hsp92II	CATG	8 cut(s)	290, 308, 317, 509, 775, 1078, 1140, 1353
HspAI	GCGC	2 cut(s)	365, 842
KroI	GCCGGC	1 cut(s)	1296
KroNI	GCCGGC	1 cut(s)	1298
Kzo9I	GATC	5 cut(s)	190, 283, 310, 1078, 1610
LguI	GCTCTTC	1 cut(s)	1245
LmnI	GCTCC	3 cut(s)	12, 1420, 1715
Lsp1109I	GCAGC	9 cut(s)	526, 544, 547, 556, 647, 973, 1114, 1202, 1736
LweI	GCATC	3 cut(s)	13, 481, 1211
MaeI	CTAG	2 cut(s)	1305, 1695
MaeII	ACGT	4 cut(s)	36, 261, 297, 1070
MaeIII	GTNAC	1 cut(s)	1545
MalI	GATC	5 cut(s)	192, 285, 312, 1080, 1612
MboI	GATC	5 cut(s)	190, 283, 310, 1078, 1610
MflI	RGATCY	1 cut(s)	1078
MhlI	GDGCHC	3 cut(s)	96, 669, 1568
MlsI	TGGCCA	1 cut(s)	1284
MluCI	AATT	1 cut(s)	473
MluNI	TGGCCA	1 cut(s)	1284
MlyI	GAGTC	2 cut(s)	595, 1385
MmeI	TCCRAC	2 cut(s)	1082, 1398
Mox20I	TGGCCA	1 cut(s)	1284
Mph1103I	ATGCAT	1 cut(s)	773
MroNI	GCCGGC	1 cut(s)	1296
MscI	TGGCCA	1 cut(s)	1284
MseI	TTAA	2 cut(s)	741, 764
MslI	CAYNNNNRTG	3 cut(s)	21, 533, 766
Msp20I	TGGCCA	1 cut(s)	1284
MspI	CCGG	4 cut(s)	30, 611, 1171, 1297
MspR9I	CCNGG	5 cut(s)	30, 611, 612, 749, 1172
Mva1269I	GAATGC	1 cut(s)	656
MvaI	CCWGG	1 cut(s)	749
MvnI	CGCG	1 cut(s)	1257
NaeI	GCCGGC	1 cut(s)	1298
NciI	CCSGG	4 cut(s)	30, 611, 612, 1172
NcoI	CCATGG	1 cut(s)	1136
NdeII	GATC	5 cut(s)	190, 283, 310, 1078, 1610
NgoMIV	GCCGGC	1 cut(s)	1296
NlaIII	CATG	8 cut(s)	290, 308, 317, 509, 775, 1078, 1140, 1353
NlaIV	GGNNCC	4 cut(s)	929, 1080, 1453, 1689
NmuCI	GTSAC	1 cut(s)	1545
NsiI	ATGCAT	1 cut(s)	773
NspI	RCATGY	2 cut(s)	509, 775
NspV	TTCGAA	1 cut(s)	1052
PaeI	GCATGC	1 cut(s)	775
PaeR7I	CTCGAG	1 cut(s)	89
PceI	AGGCCT	1 cut(s)	1007
PciSI	GCTCTTC	1 cut(s)	1245
PctI	GAATGC	1 cut(s)	656
PdiI	GCCGGC	1 cut(s)	1298
PfeI	GAWTC	9 cut(s)	173, 335, 349, 434, 646, 802, 835, 856, 1425
PflFI	GACNNNGTC	1 cut(s)	1543
PleI	GAGTC	2 cut(s)	595, 1385
PpsI	GAGTC	2 cut(s)	595, 1385
PpuMI	RGGWCCY	2 cut(s)	1452, 1688
Psp124BI	GAGCTC	1 cut(s)	1568
Psp5II	RGGWCCY	2 cut(s)	1452, 1688
Psp6I	CCWGG	1 cut(s)	747
PspFI	CCCAGC	1 cut(s)	1082
PspGI	CCWGG	1 cut(s)	747
PspN4I	GGNNCC	4 cut(s)	929, 1080, 1453, 1689
PspPI	GGNCC	3 cut(s)	1173, 1452, 1688
PspPPI	RGGWCCY	2 cut(s)	1452, 1688
PspXI	VCTCGAGB	1 cut(s)	89
PstI	CTGCAG	2 cut(s)	151, 544
PsuI	RGATCY	1 cut(s)	1078
PsyI	GACNNNGTC	1 cut(s)	1543
RsaI	GTAC	3 cut(s)	585, 792, 1402
RsaNI	GTAC	3 cut(s)	584, 791, 1401
RseI	CAYNNNNRTG	3 cut(s)	21, 533, 766
SacI	GAGCTC	1 cut(s)	1568
SapI	GCTCTTC	1 cut(s)	1245
SaqAI	TTAA	2 cut(s)	741, 764
Sau3AI	GATC	5 cut(s)	190, 283, 310, 1078, 1610
Sau96I	GGNCC	3 cut(s)	1173, 1452, 1688
ScaI	AGTACT	1 cut(s)	1402
SchI	GAGTC	2 cut(s)	595, 1385
ScrFI	CCNGG	5 cut(s)	30, 611, 612, 749, 1172
SduI	GDGCHC	3 cut(s)	96, 669, 1568
SfaNI	GCATC	3 cut(s)	13, 481, 1211
SfcI	CTRYAG	3 cut(s)	147, 540, 968
Sfr274I	CTCGAG	1 cut(s)	89
SfuI	TTCGAA	1 cut(s)	1052
SinI	GGWCC	2 cut(s)	1452, 1688
SlaI	CTCGAG	1 cut(s)	89
SmaI	CCCGGG	1 cut(s)	612
SmiMI	CAYNNNNRTG	3 cut(s)	21, 533, 766
SmlI	CTYRAG	2 cut(s)	89, 1180
SmoI	CTYRAG	2 cut(s)	89, 1180
SphI	GCATGC	1 cut(s)	775
Sse9I	AATT	1 cut(s)	473
SseBI	AGGCCT	1 cut(s)	1007
SsiI	CCGC	8 cut(s)	521, 548, 573, 1217, 1255, 1380, 1642, 1704
SspMI	CTAG	2 cut(s)	1305, 1695
SstI	GAGCTC	1 cut(s)	1568
StuI	AGGCCT	1 cut(s)	1007
StyD4I	CCNGG	5 cut(s)	28, 609, 610, 747, 1170
StyI	CCWWGG	5 cut(s)	177, 327, 1008, 1136, 1694
TaaI	ACNGT	2 cut(s)	781, 1409
TaiI	ACGT	4 cut(s)	39, 264, 300, 1073
TaqI	TCGA	5 cut(s)	21, 42, 90, 471, 1052
TasI	AATT	1 cut(s)	473
TatI	WGTACW	2 cut(s)	790, 1400
TauI	GCSGC	3 cut(s)	551, 575, 1645
TfiI	GAWTC	9 cut(s)	173, 335, 349, 434, 646, 802, 835, 856, 1425
Tru1I	TTAA	2 cut(s)	741, 764
Tru9I	TTAA	2 cut(s)	741, 764
TscAI	CASTG	4 cut(s)	156, 598, 1100, 1414
TseFI	GTSAC	1 cut(s)	1545
TseI	GCWGC	9 cut(s)	539, 557, 560, 569, 635, 986, 1127, 1190, 1724
Tsp45I	GTSAC	1 cut(s)	1545
TspDTI	ATGAA	4 cut(s)	17, 1008, 1063, 1335
TspMI	CCCGGG	1 cut(s)	610
TspRI	CASTG	4 cut(s)	156, 598, 1100, 1414
Tth111I	GACNNNGTC	1 cut(s)	1543
VpaK11BI	GGWCC	2 cut(s)	1452, 1688
XagI	CCTNNNNNAGG	1 cut(s)	1180
XceI	RCATGY	2 cut(s)	509, 775
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1347
XhoI	CTCGAG	1 cut(s)	89
XmaI	CCCGGG	1 cut(s)	610
XmaJI	CCTAGG	1 cut(s)	1694
XmiI	GTMKAC	2 cut(s)	264, 300
XspI	CTAG	2 cut(s)	1305, 1695
ZrmI	AGTACT	1 cut(s)	1402
Zsp2I	ATGCAT	1 cut(s)	773

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.