pycom07g17210

IQ-DOMAIN 1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
19751472 .. 19753803
2332 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g17210.2

Sequence Viewer

Length: 1494 bp
ATGGGGAGGAAAGGGAGTTGGTTTTCTGCATTGAAGAAAGCCCTCACCCCTGATCCAAAGGAAAAGAAAGACCAGAAGACTCACAAGTCAAAGAAGAGATGGTTTGGGAAGCACAAGAACGAGGATGCGGTATCTTCCTGGGAAAAAACCGCATTTATTATCCCTGCCTCCGCCCCTAACCCCGCCCATGCCCCCGCCCCTCCTCCTCCCCCGACCCCGCCTCCCAAAGAAGATGTCAAATTAGCTGAGGCTGAGAATGCACAGAACAAACATGTTTACTCTGTGGCACTTGCTACCGCCGCGGCTGCAGAGGCAGCTGTGGCTGCTGCTCAGGCTGCCGCAGAGGTTGTTCGCCTTACAGCTGTGCCCATGCCCCGTTACCCTGGAAAGTCGATGCAGGAGGTTGCAGCTATCAAGATTCAGACTGCATTCCGAGGGCACATGGCAAGAAGGGCGTTACGAGCTTTGAGGGGGTTGGGGAGGTTGAAATCATTGCTACAAGGCCAATCTGTTAAACGGCAAGCAACTACAACGTTAAGATGCATGCAGACTCTTGCTCGTGTGCAGTCTGAGATTCGTGCAAGGAGGATTAGAATGTCCGAGGAGAATCAGGCTTTCCAGAGACAGCTCCAACAGAAACAAGAGAAAGAGCTTGAGAAAATAAAAAAAGATTCTATGGGAGAAGATTGGGATGATAGCATTCAATCGAAGGAACAGGTCGAGGCAAGGCTACAACTGAAACAAGAGGCTGCTATGAGACGAGAAAGGGCGTTGGCTTATTCATTCTCTCACCAGAAGATGAACTCTTCGAAATCTGCACACCCGACCTTTATGGATCCCAGCAATCCCCACTGGGGTTGGAGTTGGTTAGAGAGATGGGTGGCTGCAAGGCCGTGGGAGAGCCGAAGTACAGCAGACTTCAATGACCGGGCCTCCATGAGGAGTGCAGCAAGCCGTGCCTCCATGCCAGTGGGGGAAATCACCAAAGCTTATGCTCTTCGTGATAAGCCTTCTCCTAGGACCCCTACTGCCCTAAGATCAAGCAGGCCTGCCAGTCGCCAATCCCCTACAACTTCTTTCTCCAGGGCACCATCATCAGCATCAGTAACCGGGAGAACCCCAAGAGGATATGGCTGGGGTGGAGATGAGGACTCCAGGAGCACACTCAGCATCCAGTCAGAGCGCTTCAATAGGAGGCATAGCATCGCAGGATCCTCTGTCAGAGATGATGAGAGCCTTGCAAGCTCGCCTTCTGTTCCAAGTTACATGACACCCACGAAATCAACAAAGGCCAGGTCGAGGTTGGCAACCCCAAGCTCAAACCAGTCAGAGAAGAACGGGACACCATCAGAGAAGGGATCAGTGACCTCTGCAAAGAAGCGGCTGTCATTCTCTGCATCCCCAGCTGGACCAAGGAGGCACTCCGGTCCTCCTAGGGTTGATTCTAGCTCCGTTAAAAGCCCTCCAGTGCACGAGAGGAAAGGCAGCAGGTAG

Protein Analysis

498

Amino Acids

54.82

Weight (kDa)

10.71

Isoelectric Point (pI)

67.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 85
Acc36I ACCTGC 1 cut(s) 1479
AccB1I GGYRCC 1 cut(s) 1087
AccII CGCG 1 cut(s) 302
AclI AACGTT 1 cut(s) 533
AclWI GGATC 6 cut(s) 47, 830, 843, 1206, 1219, 1366
AfaI GTAC 1 cut(s) 910
AfeI AGCGCT 1 cut(s) 1184
AfiI CCNNNNNNNGG 3 cut(s) 854, 939, 1299
AflIII ACRYGT 1 cut(s) 271
AgsI TTSAA 5 cut(s) 34, 487, 704, 922, 1189
AjnI CCWGG 5 cut(s) 137, 382, 1082, 1154, 1292
Alw21I GWGCWC 2 cut(s) 1163, 1473
Alw26I GTCTC 2 cut(s) 616, 751
Alw44I GTGCAC 1 cut(s) 1469
AlwI GGATC 6 cut(s) 47, 830, 843, 1206, 1219, 1366
Aor51HI AGCGCT 1 cut(s) 1184
AoxI GGCC 5 cut(s) 502, 890, 930, 1046, 1290
ApaLI GTGCAC 1 cut(s) 1469
ArsI GACNNNNNNTTYG 4 cut(s) 219, 251, 1280, 1312
AspA2I CCTAGG 2 cut(s) 1016, 1433
AspLEI GCGC 1 cut(s) 1185
AspS9I GGNCC 4 cut(s) 930, 1020, 1409, 1427
AsuC2I CCSGG 2 cut(s) 929, 1111
AsuHPI GGTGA 3 cut(s) 37, 782, 973
AsuII TTCGAA 1 cut(s) 809
AvaII GGWCC 3 cut(s) 1020, 1409, 1427
AvrII CCTAGG 2 cut(s) 1016, 1433
BaeGI GKGCMC 4 cut(s) 369, 441, 1090, 1473
BamHI GGATCC 2 cut(s) 835, 1211
BanI GGYRCC 1 cut(s) 1087
BauI CACGAG 2 cut(s) 558, 1472
BbsI GAAGAC 1 cut(s) 83
Bbv12I GWGCWC 2 cut(s) 1163, 1473
BbvCI CCTCAGC 1 cut(s) 246
BbvI GCAGC 9 cut(s) 292, 310, 313, 322, 326, 419, 736, 871, 959
BccI CCATC 4 cut(s) 93, 870, 1099, 1354
BceAI ACGGC 3 cut(s) 533, 877, 939
BciT130I CCWGG 5 cut(s) 139, 384, 1084, 1156, 1294
BcnI CCSGG 2 cut(s) 929, 1111
BcoDI GTCTC 2 cut(s) 616, 751
BfaI CTAG 3 cut(s) 1017, 1434, 1446
BfmI CTRYAG 1 cut(s) 306
BfoI RGCGCY 1 cut(s) 1186
BfuAI ACCTGC 1 cut(s) 1479
BlnI CCTAGG 2 cut(s) 1016, 1433
Bme1390I CCNGG 7 cut(s) 139, 384, 929, 1084, 1111, 1156, 1294
Bme18I GGWCC 3 cut(s) 1020, 1409, 1427
BmgT120I GGNCC 4 cut(s) 930, 1020, 1409, 1427
BmiI GGNNCC 4 cut(s) 837, 1022, 1089, 1213
BmrFI CCNGG 7 cut(s) 139, 384, 929, 1084, 1111, 1156, 1294
BmrI ACTGGG 1 cut(s) 862
BmsI GCATC 7 cut(s) 115, 384, 530, 1109, 1179, 1212, 1406
BmuI ACTGGG 1 cut(s) 862
BpiI GAAGAC 1 cut(s) 83
BpmI CTGGAG 3 cut(s) 1066, 1138, 1449
Bpu10I CCTNAGC 2 cut(s) 246, 330
Bpu14I TTCGAA 1 cut(s) 809
BpuEI CTTGAG 1 cut(s) 674
BpuMI CCSGG 2 cut(s) 929, 1111
BsaWI WCCGGW 1 cut(s) 1424
BsaXI ACNNNNNCTCC 4 cut(s) 205, 235, 917, 947
Bsc4I CCNNNNNNNGG 3 cut(s) 854, 939, 1299
Bse1I ACTGG 6 cut(s) 857, 968, 1053, 1174, 1324, 1466
Bse3DI GCAATG 1 cut(s) 491
BseBI CCWGG 5 cut(s) 139, 384, 1084, 1156, 1294
BseGI GGATG 4 cut(s) 130, 697, 1170, 1397
BseLI CCNNNNNNNGG 3 cut(s) 854, 939, 1299
BseMI GCAATG 1 cut(s) 491
BseMII CTCAG 5 cut(s) 237, 243, 344, 561, 1180
BseNI ACTGG 6 cut(s) 857, 968, 1053, 1174, 1324, 1466
BseRI GAGGAG 4 cut(s) 192, 195, 617, 955
BseSI GKGCMC 4 cut(s) 369, 441, 1090, 1473
BseXI GCAGC 9 cut(s) 292, 310, 313, 322, 326, 419, 736, 871, 959
BseYI CCCAGC 3 cut(s) 839, 1134, 1402
BsgI GTGCAG 3 cut(s) 584, 801, 966
Bsh1236I CGCG 1 cut(s) 302
BshFI GGCC 5 cut(s) 504, 892, 932, 1048, 1292
BshNI GGYRCC 1 cut(s) 1087
BsiHKAI GWGCWC 2 cut(s) 1163, 1473
BsiSI CCGG 3 cut(s) 928, 1110, 1425
BslFI GGGAC 1 cut(s) 1354
BslI CCNNNNNNNGG 3 cut(s) 854, 939, 1299
BsmAI GTCTC 2 cut(s) 616, 751
BsmBI CGTCTC 1 cut(s) 751
BsmFI GGGAC 1 cut(s) 1354
BsmI GAATGC 3 cut(s) 262, 428, 699
BsnI GGCC 5 cut(s) 504, 892, 932, 1048, 1292
Bsp119I TTCGAA 1 cut(s) 809
Bsp1286I GDGCHC 5 cut(s) 369, 441, 1090, 1163, 1473
Bsp143I GATC 5 cut(s) 52, 835, 1037, 1211, 1358
BspANI GGCC 5 cut(s) 504, 892, 932, 1048, 1292
BspCNI CTCAG 5 cut(s) 238, 244, 343, 562, 1179
BspFNI CGCG 1 cut(s) 302
BspLI GGNNCC 4 cut(s) 837, 1022, 1089, 1213
BspMAI CTGCAG 1 cut(s) 310
BspMI ACCTGC 1 cut(s) 1479
BspPI GGATC 6 cut(s) 47, 830, 843, 1206, 1219, 1366
BspQI GCTCTTC 1 cut(s) 1002
BspT104I TTCGAA 1 cut(s) 809
BspT107I GGYRCC 1 cut(s) 1087
BsrDI GCAATG 1 cut(s) 491
BsrI ACTGG 6 cut(s) 857, 968, 1053, 1174, 1324, 1466
BssMI GATC 5 cut(s) 52, 835, 1037, 1211, 1358
BssSI CACGAG 2 cut(s) 558, 1472
BssT1I CCWWGG 3 cut(s) 1016, 1412, 1433
Bst2BI CACGAG 2 cut(s) 558, 1472
Bst2UI CCWGG 5 cut(s) 139, 384, 1084, 1156, 1294
Bst6I CTCTTC 3 cut(s) 89, 811, 1002
BstAPI GCANNNNNTGC 1 cut(s) 956
BstBI TTCGAA 1 cut(s) 809
BstC8I GCNNGC 7 cut(s) 522, 545, 952, 1046, 1050, 1243, 1247
BstDEI CTNAG 6 cut(s) 246, 252, 330, 570, 1034, 1166
BstDSI CCRYGG 2 cut(s) 300, 893
BstENI CCTNNNNNAGG 1 cut(s) 937
BstF5I GGATG 4 cut(s) 130, 697, 1170, 1397
BstFNI CGCG 1 cut(s) 302
BstH2I RGCGCY 1 cut(s) 1186
BstHHI GCGC 1 cut(s) 1185
BstKTI GATC 5 cut(s) 55, 838, 1040, 1214, 1361
BstMAI GTCTC 2 cut(s) 616, 751
BstMBI GATC 5 cut(s) 52, 835, 1037, 1211, 1358
BstNI CCWGG 5 cut(s) 139, 384, 1084, 1156, 1294
BstNSI RCATGY 2 cut(s) 275, 547
BstSCI CCNGG 7 cut(s) 137, 382, 927, 1082, 1109, 1154, 1292
BstSFI CTRYAG 1 cut(s) 306
BstSLI GKGCMC 4 cut(s) 369, 441, 1090, 1473
BstUI CGCG 1 cut(s) 302
BstV1I GCAGC 9 cut(s) 292, 310, 313, 322, 326, 419, 736, 871, 959
BstV2I GAAGAC 1 cut(s) 83
BstX2I RGATCY 2 cut(s) 835, 1211
BstXI CCANNNNNNTGG 1 cut(s) 970
BstYI RGATCY 2 cut(s) 835, 1211
BsuRI GGCC 5 cut(s) 504, 892, 932, 1048, 1292
BtgI CCRYGG 2 cut(s) 300, 893
BtgZI GCGATG 1 cut(s) 1189
BtsCI GGATG 4 cut(s) 130, 697, 1170, 1397
BtsIMutI CAGTG 4 cut(s) 850, 975, 1368, 1473
BveI ACCTGC 1 cut(s) 1479
Cac8I GCNNGC 7 cut(s) 522, 545, 952, 1046, 1050, 1243, 1247
CfoI GCGC 1 cut(s) 1185
Cfr13I GGNCC 4 cut(s) 930, 1020, 1409, 1427
Cfr42I CCGCGG 1 cut(s) 303
Csp6I GTAC 1 cut(s) 909
CspCI CAANNNNNGTGG 2 cut(s) 839, 874
CviAII CATG 8 cut(s) 188, 272, 370, 442, 544, 937, 964, 1267
CviQI GTAC 1 cut(s) 909
DdeI CTNAG 6 cut(s) 246, 252, 330, 570, 1034, 1166
DpnI GATC 5 cut(s) 54, 837, 1039, 1213, 1360
DpnII GATC 5 cut(s) 52, 835, 1037, 1211, 1358
DrdI GACNNNNNNGTC 1 cut(s) 85
DseDI GACNNNNNNGTC 1 cut(s) 85
Eam1104I CTCTTC 3 cut(s) 89, 811, 1002
EarI CTCTTC 3 cut(s) 89, 811, 1002
EciI GGCGGA 1 cut(s) 160
Eco130I CCWWGG 3 cut(s) 1016, 1412, 1433
Eco147I AGGCCT 1 cut(s) 1048
Eco47I GGWCC 3 cut(s) 1020, 1409, 1427
Eco47III AGCGCT 1 cut(s) 1184
EcoNI CCTNNNNNAGG 1 cut(s) 937
EcoO109I RGGNCCY 1 cut(s) 1020
EcoRII CCWGG 5 cut(s) 137, 382, 1082, 1154, 1292
EcoT14I CCWWGG 3 cut(s) 1016, 1412, 1433
EcoT22I ATGCAT 1 cut(s) 545
ErhI CCWWGG 3 cut(s) 1016, 1412, 1433
Esp3I CGTCTC 1 cut(s) 751
FaeI CATG 8 cut(s) 191, 275, 373, 445, 547, 940, 967, 1270
FalI AAGNNNNNCTT 2 cut(s) 1234, 1266
FaqI GGGAC 1 cut(s) 1354
FatI CATG 8 cut(s) 187, 271, 369, 441, 543, 936, 963, 1266
FauI CCCGC 3 cut(s) 190, 202, 225
FokI GGATG 4 cut(s) 137, 704, 1157, 1384
FspBI CTAG 3 cut(s) 1017, 1434, 1446
GlaI GCGC 1 cut(s) 1184
GsaI CCCAGC 3 cut(s) 843, 1138, 1406
GsuI CTGGAG 3 cut(s) 1066, 1138, 1449
HaeII RGCGCY 1 cut(s) 1186
HaeIII GGCC 5 cut(s) 504, 892, 932, 1048, 1292
HapII CCGG 3 cut(s) 928, 1110, 1425
HhaI GCGC 1 cut(s) 1185
Hin1II CATG 8 cut(s) 191, 275, 373, 445, 547, 940, 967, 1270
Hin6I GCGC 1 cut(s) 1183
HinP1I GCGC 1 cut(s) 1183
HindIII AAGCTT 1 cut(s) 987
HinfI GANTC 8 cut(s) 79, 418, 550, 574, 607, 671, 1151, 1442
HpaII CCGG 3 cut(s) 928, 1110, 1425
HphI GGTGA 3 cut(s) 37, 782, 973
Hpy166II GTNNAC 2 cut(s) 277, 1471
Hpy188I TCNGA 8 cut(s) 423, 434, 571, 601, 1180, 1223, 1330, 1351
Hpy188III TCNNGA 3 cut(s) 415, 619, 1001
Hpy8I GTNNAC 2 cut(s) 277, 1471
HpyAV CCTTC 5 cut(s) 444, 703, 1020, 1260, 1348
HpyCH4IV ACGT 1 cut(s) 533
HpyF3I CTNAG 6 cut(s) 246, 252, 330, 570, 1034, 1166
HpySE526I ACGT 1 cut(s) 533
Hsp92II CATG 8 cut(s) 191, 275, 373, 445, 547, 940, 967, 1270
HspAI GCGC 1 cut(s) 1183
KspI CCGCGG 1 cut(s) 303
Kzo9I GATC 5 cut(s) 52, 835, 1037, 1211, 1358
LguI GCTCTTC 1 cut(s) 1002
LmnI GCTCC 3 cut(s) 633, 1158, 1454
Lsp1109I GCAGC 9 cut(s) 292, 310, 313, 322, 326, 419, 736, 871, 959
LweI GCATC 7 cut(s) 115, 384, 530, 1109, 1179, 1212, 1406
MaeI CTAG 3 cut(s) 1017, 1434, 1446
MaeII ACGT 1 cut(s) 533
MaeIII GTNAC 5 cut(s) 377, 456, 1105, 1262, 1363
MalI GATC 5 cut(s) 54, 837, 1039, 1213, 1360
MboI GATC 5 cut(s) 52, 835, 1037, 1211, 1358
MflI RGATCY 2 cut(s) 835, 1211
MhlI GDGCHC 5 cut(s) 369, 441, 1090, 1163, 1473
MluCI AATT 1 cut(s) 239
MlyI GAGTC 3 cut(s) 73, 544, 1145
MmeI TCCRAC 2 cut(s) 655, 839
Mph1103I ATGCAT 1 cut(s) 545
MseI TTAA 3 cut(s) 513, 536, 1455
MslI CAYNNNNRTG 1 cut(s) 968
MspA1I CMGCKG 4 cut(s) 302, 317, 362, 1406
MspI CCGG 3 cut(s) 928, 1110, 1425
MspR9I CCNGG 7 cut(s) 139, 384, 929, 1084, 1111, 1156, 1294
Mva1269I GAATGC 3 cut(s) 262, 428, 699
MvaI CCWGG 5 cut(s) 139, 384, 1084, 1156, 1294
MvnI CGCG 1 cut(s) 302
NciI CCSGG 2 cut(s) 929, 1111
NdeII GATC 5 cut(s) 52, 835, 1037, 1211, 1358
NlaIII CATG 8 cut(s) 191, 275, 373, 445, 547, 940, 967, 1270
NlaIV GGNNCC 4 cut(s) 837, 1022, 1089, 1213
NmuCI GTSAC 1 cut(s) 1363
NsiI ATGCAT 1 cut(s) 545
NspI RCATGY 2 cut(s) 275, 547
NspV TTCGAA 1 cut(s) 809
PaeI GCATGC 1 cut(s) 547
PceI AGGCCT 1 cut(s) 1048
PciI ACATGT 1 cut(s) 271
PciSI GCTCTTC 1 cut(s) 1002
PctI GAATGC 3 cut(s) 262, 428, 699
PfeI GAWTC 5 cut(s) 418, 574, 607, 671, 1442
PfoI TCCNGGA 1 cut(s) 1154
PleI GAGTC 3 cut(s) 73, 544, 1145
PpsI GAGTC 3 cut(s) 73, 544, 1145
PpuMI RGGWCCY 1 cut(s) 1020
PscI ACATGT 1 cut(s) 271
Psp1406I AACGTT 1 cut(s) 533
Psp5II RGGWCCY 1 cut(s) 1020
Psp6I CCWGG 5 cut(s) 137, 382, 1082, 1154, 1292
PspFI CCCAGC 3 cut(s) 839, 1134, 1402
PspGI CCWGG 5 cut(s) 137, 382, 1082, 1154, 1292
PspN4I GGNNCC 4 cut(s) 837, 1022, 1089, 1213
PspPI GGNCC 4 cut(s) 930, 1020, 1409, 1427
PspPPI RGGWCCY 1 cut(s) 1020
PstI CTGCAG 1 cut(s) 310
PsuI RGATCY 2 cut(s) 835, 1211
PvuII CAGCTG 3 cut(s) 317, 362, 1406
RsaI GTAC 1 cut(s) 910
RsaNI GTAC 1 cut(s) 909
RseI CAYNNNNRTG 1 cut(s) 968
SacII CCGCGG 1 cut(s) 303
SapI GCTCTTC 1 cut(s) 1002
SaqAI TTAA 3 cut(s) 513, 536, 1455
Sau3AI GATC 5 cut(s) 52, 835, 1037, 1211, 1358
Sau96I GGNCC 4 cut(s) 930, 1020, 1409, 1427
SchI GAGTC 3 cut(s) 73, 544, 1145
ScrFI CCNGG 7 cut(s) 139, 384, 929, 1084, 1111, 1156, 1294
SduI GDGCHC 5 cut(s) 369, 441, 1090, 1163, 1473
SfaNI GCATC 7 cut(s) 115, 384, 530, 1109, 1179, 1212, 1406
SfcI CTRYAG 1 cut(s) 306
Sfr303I CCGCGG 1 cut(s) 303
SfuI TTCGAA 1 cut(s) 809
SgrBI CCGCGG 1 cut(s) 303
SinI GGWCC 3 cut(s) 1020, 1409, 1427
SmiMI CAYNNNNRTG 1 cut(s) 968
SmlI CTYRAG 1 cut(s) 653
SmoI CTYRAG 1 cut(s) 653
SphI GCATGC 1 cut(s) 547
Sse9I AATT 1 cut(s) 239
SseBI AGGCCT 1 cut(s) 1048
SspMI CTAG 3 cut(s) 1017, 1434, 1446
StuI AGGCCT 1 cut(s) 1048
StyD4I CCNGG 7 cut(s) 137, 382, 927, 1082, 1109, 1154, 1292
StyI CCWWGG 3 cut(s) 1016, 1412, 1433
TaiI ACGT 1 cut(s) 536
TaqI TCGA 5 cut(s) 392, 707, 720, 809, 1298
TasI AATT 1 cut(s) 239
TatI WGTACW 1 cut(s) 908
TauI GCSGC 4 cut(s) 302, 305, 341, 1384
TfiI GAWTC 5 cut(s) 418, 574, 607, 671, 1442
Tru1I TTAA 3 cut(s) 513, 536, 1455
Tru9I TTAA 3 cut(s) 513, 536, 1455
TscAI CASTG 4 cut(s) 857, 975, 1368, 1473
TseFI GTSAC 1 cut(s) 1363
Tsp45I GTSAC 1 cut(s) 1363
TspDTI ATGAA 2 cut(s) 771, 815
TspGWI ACGGA 1 cut(s) 1441
TspRI CASTG 4 cut(s) 857, 975, 1368, 1473
VneI GTGCAC 1 cut(s) 1469
VpaK11BI GGWCC 3 cut(s) 1020, 1409, 1427
XagI CCTNNNNNAGG 1 cut(s) 937
XceI RCATGY 2 cut(s) 275, 547
XcmI CCANNNNNNNNNTGG 1 cut(s) 1300
XmaJI CCTAGG 2 cut(s) 1016, 1433
XspI CTAG 3 cut(s) 1017, 1434, 1446
Zsp2I ATGCAT 1 cut(s) 545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.