Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0012650

Physical Location & Seq

Genomic Coordinates Forward (+)

55481685 .. 55485993

Gene Structure 4309 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG320400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1650 bp

ATGGGGAGGAAAGGGAGTTGGTTTTCTGCAGTGAAGAAAGCCCTCAACCCTGAATCCAAGGAAAAGAAAGATCAGAAATCCAAGTCAAAGAAAAAATGGTTTGGGAAAAACAAGAATGTGGATGAGGATTATGAGGAAAATGTAGACCACTTGAAAAATGCAGATCATGTGGAAAACGTAGACCATGTGGATCATGGGGTATCTTCCAAGGAAGAATCTGCATTTGTGATTCCCACTTCTTTTGCGCCACCTCCTCCTCCACCACCTCATCCTACTCTTCCTCCAATAAAAGAGAAGTTAGAGGAGGGTGAGGATTCACAGAGAACCTCTCTTGCTCTAAAGGAAGATGTCGAATTACTGGAGGCAGAGGATGCTCAGAGCAAGCATGTTTACTCTGTGGCGGTTGCCACAGCAATGGCTGCAGAGGCGGCTGTTGCTGCTGCTCGGGCTGCCGTAGAGGTTGTACGTCTCACTGGGCTGACTCATTTCCCGGGGAAATCTTTGGAGGAGGTAGCAGCCATCAAGATCCAGACGGCATTCCGAGGGCACTTGGCAAGGAGGGCATTACGGGCTTTGAGAGGGTTGGTGAGGTTGAAATCATTGGTAGAGGGTCAATCTGTTAAACGCCAGGCGACTACCACATTAAAATGCATGCAGACCGTTGCTCGTGTACAATCTGAGATTCGTGCAAGGAGGATTAGAATGTCTGAGGAGAATCAGGCGCTTCAGCGACAGATTCAACAGAAACAAGACAAAGAGTTGAAAGAGATGGAGAAACACAGAGTTGCTTCTATTGGAGACAACTGGAACCATAGCCCCCAATCTAAGGAGGAGGTTGAGGCAAAGCTACAGAGCAGACAAGAGGCTGCTAAGAGAAGAGAAAAGGCCTTGGCTTATTCATTCTCTCATCAGAGGATGTGGAAGAACTCTTCGAAATCTCAACATCCTACGTTCATGGATCCCAGCAATCCCCACTGGGGTTGGAGTTGGTTAGAGAGATGGATGGCTGCAAGACCATGGGAGAGCCAAAGCACATCAGACTACAATGACCGGGCCTCCTTGAGGAGTGCAGCAAGCCGTGCATCAATGTCAGTTGCGGAAATCACCAAAGCTTATGCTCTTCGTGATGTCCACCGCGATAACAAGCCTCCTTCCCCAACTGGCCAAAAATCAAGCCGGCCTCCTAGTCGCCAATCCCCTTCAGCTCTTACCAAGACACCATCTTCATCATGGAGAACCCCAAAAAAGAATGGCTCAGGCGGGGACGAGGACTCCAGAAGTACTTACAGTGTGCAGTCGGAGCGATTCAACAGGAGGCATAGCATTGCAGGGTCCTCAGTAAGAGATGATGAGAGCCTTGCAAGCACGCCTTCAGTTCCTTCTTCAAAAAGATACCTGACACCCACAAGCTCAACGAAGACAAGGTCACGACTGGCAAGCCCGAGCTCATCGGGGTTAGAAAAGAACAGGACACCAACACCAGACAAGGGATCGTCACCATCAATCAGTTCTGTGAAGAAGCGGCTGTCTTACCCTGCTTCCCCTGCTGGACAAAGGAGGCACTCGGGTCCTCCTAGGGTCGGCGGTAGCTCCCCTAAGGGTGCAGCTCACACAGAGAAGAAAGTTAGCAATGGTTGGGGAAGCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005856 GO:0005874 GO:0008017 GO:0008092 GO:0015630 GO:0015631 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4005 IQ

Protein Analysis

549

Amino Acids

60.85

Weight (kDa)

10.05

Isoelectric Point (pI)

64.11

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012650)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g20080 FvH4_7g20080
malus_domestica	MD07G1178400.v1.1
prunus_persica	Prupe.2G217600_v2.0.a1 Prupe.2G217600_v2.0.a1 Prupe.2G217600_v2.0.a1 Prupe.2G217600_v2.0.a1
pyrus_communis	pycom01g13920 pycom07g17210
rosa_chinensis	RchiOBHm_Chr1g0364041
rosa_laevigata	RLG00000027522
rosa_multiflora	Rmu_sc0009677.1_g000016
rosa_roxburghii	Rroxscaffold_4G00292710
rosa_rugosa	Rorug01G0313100
rosa_samantha	Rh1AG320400 Rh1BG283600 Rh1CG300000 Rh1DG315100
rosa_wichuraiana	Rw1G028400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	144, 180
AccII	CGCG	1 cut(s)	1137
AciI	CCGC	7 cut(s)	401, 428, 1097, 1135, 1260, 1522, 1584
AclWI	GGATC	5 cut(s)	198, 520, 953, 966, 1498
AcoI	YGGCCR	1 cut(s)	1162
AcuI	CTGAAG	3 cut(s)	710, 1185, 1356
AfaI	GTAC	3 cut(s)	465, 672, 1282
AfiI	CCNNNNNNNGG	5 cut(s)	826, 977, 1062, 1487, 1580
AgsI	TTSAA	6 cut(s)	154, 595, 740, 763, 1309, 1386
AjnI	CCWGG	1 cut(s)	627
AluBI	AGCT	7 cut(s)	847, 1112, 1205, 1410, 1446, 1590, 1607
AluI	AGCT	7 cut(s)	847, 1112, 1205, 1410, 1446, 1590, 1607
Alw21I	GWGCWC	1 cut(s)	1448
Alw26I	GTCTC	2 cut(s)	473, 792
AlwI	GGATC	5 cut(s)	198, 520, 953, 966, 1498
Ama87I	CYCGRG	4 cut(s)	444, 490, 1441, 1564
AoxI	GGCC	4 cut(s)	885, 1053, 1162, 1178
ApeKI	GCWGC	9 cut(s)	419, 437, 440, 449, 515, 866, 1007, 1070, 1604
ArsI	GACNNNNNNTTYG	2 cut(s)	1409, 1441
AspA2I	CCTAGG	1 cut(s)	1574
AspLEI	GCGC	2 cut(s)	247, 724
AspS9I	GGNCC	3 cut(s)	1053, 1332, 1568
AsuC2I	CCSGG	3 cut(s)	491, 492, 1052
AsuHPI	GGTGA	4 cut(s)	320, 598, 1096, 1488
AsuII	TTCGAA	1 cut(s)	932
AvaI	CYCGRG	4 cut(s)	444, 490, 1441, 1564
AvaII	GGWCC	2 cut(s)	1332, 1568
AvrII	CCTAGG	1 cut(s)	1574
AxyI	CCTNAGG	1 cut(s)	1596
BaeGI	GKGCMC	1 cut(s)	549
BalI	TGGCCA	1 cut(s)	1164
BamHI	GGATCC	1 cut(s)	958
BanII	GRGCYC	1 cut(s)	1448
BauI	CACGAG	1 cut(s)	666
BbsI	GAAGAC	1 cut(s)	1424
Bbv12I	GWGCWC	1 cut(s)	1448
BbvI	GCAGC	9 cut(s)	406, 424, 427, 436, 527, 853, 994, 1082, 1616
BccI	CCATC	6 cut(s)	527, 763, 993, 997, 1228, 1507
BceAI	ACGGC	3 cut(s)	437, 549, 1062
BciT130I	CCWGG	1 cut(s)	629
BcnI	CCSGG	3 cut(s)	491, 492, 1052
BcoDI	GTCTC	2 cut(s)	473, 792
BfaI	CTAG	2 cut(s)	1185, 1575
BfmI	CTRYAG	3 cut(s)	27, 420, 848
BfoI	RGCGCY	1 cut(s)	725
BlnI	CCTAGG	1 cut(s)	1574
BmcAI	AGTACT	1 cut(s)	1282
Bme1390I	CCNGG	4 cut(s)	491, 492, 629, 1052
Bme18I	GGWCC	2 cut(s)	1332, 1568
BmeT110I	CYCGRG	4 cut(s)	444, 490, 1441, 1564
BmgT120I	GGNCC	3 cut(s)	1053, 1332, 1568
BmiI	GGNNCC	4 cut(s)	809, 960, 1333, 1569
BmrFI	CCNGG	4 cut(s)	491, 492, 629, 1052
BmrI	ACTGGG	2 cut(s)	483, 985
BmsI	GCATC	2 cut(s)	361, 1091
BmuI	ACTGGG	2 cut(s)	483, 985
BpiI	GAAGAC	1 cut(s)	1424
BplI	GAGNNNNNCTC	2 cut(s)	313, 345
BpmI	CTGGAG	2 cut(s)	380, 1258
Bpu10I	CCTNAGC	1 cut(s)	1255
Bpu14I	TTCGAA	1 cut(s)	932
BpuEI	CTTGAG	1 cut(s)	1081
BpuMI	CCSGG	3 cut(s)	491, 492, 1052
BsaJI	CCNNGG	8 cut(s)	57, 207, 490, 491, 541, 888, 1016, 1574
BsaXI	ACNNNNNCTCC	6 cut(s)	265, 295, 1040, 1070, 1256, 1286
Bsc4I	CCNNNNNNNGG	5 cut(s)	826, 977, 1062, 1487, 1580
Bse118I	RCCGGY	1 cut(s)	1176
Bse1I	ACTGG	6 cut(s)	363, 478, 809, 980, 1165, 1437
Bse21I	CCTNAGG	1 cut(s)	1596
Bse3DI	GCAATG	3 cut(s)	420, 1323, 1636
BseBI	CCWGG	1 cut(s)	629
BseDI	CCNNGG	8 cut(s)	57, 207, 490, 491, 541, 888, 1016, 1574
BseGI	GGATG	6 cut(s)	127, 268, 376, 921, 943, 1008
BseLI	CCNNNNNNNGG	5 cut(s)	826, 977, 1062, 1487, 1580
BseMI	GCAATG	3 cut(s)	420, 1323, 1636
BseMII	CTCAG	5 cut(s)	389, 669, 699, 1269, 1350
BseNI	ACTGG	6 cut(s)	363, 478, 809, 980, 1165, 1437
BseRI	GAGGAG	7 cut(s)	243, 246, 317, 521, 725, 845, 1078
BseSI	GKGCMC	1 cut(s)	549
BseXI	GCAGC	9 cut(s)	406, 424, 427, 436, 527, 853, 994, 1082, 1616
BseYI	CCCAGC	1 cut(s)	962
BsgI	GTGCAG	3 cut(s)	1089, 1313, 1623
Bsh1236I	CGCG	1 cut(s)	1137
BshFI	GGCC	4 cut(s)	887, 1055, 1164, 1180
BsiHKAI	GWGCWC	1 cut(s)	1448
BsiHKCI	CYCGRG	4 cut(s)	444, 490, 1441, 1564
BsiSI	CCGG	3 cut(s)	491, 1051, 1177
BslFI	GGGAC	1 cut(s)	1277
BslI	CCNNNNNNNGG	5 cut(s)	826, 977, 1062, 1487, 1580
BsmAI	GTCTC	2 cut(s)	473, 792
BsmBI	CGTCTC	1 cut(s)	473
BsmFI	GGGAC	1 cut(s)	1277
BsmI	GAATGC	1 cut(s)	536
BsnI	GGCC	4 cut(s)	887, 1055, 1164, 1180
BsoBI	CYCGRG	4 cut(s)	444, 490, 1441, 1564
Bsp119I	TTCGAA	1 cut(s)	932
Bsp1286I	GDGCHC	2 cut(s)	549, 1448
Bsp1407I	TGTACA	1 cut(s)	670
Bsp143I	GATC	6 cut(s)	70, 163, 190, 525, 958, 1490
Bsp19I	CCATGG	1 cut(s)	1016
BspACI	CCGC	7 cut(s)	401, 428, 1097, 1135, 1260, 1522, 1584
BspANI	GGCC	4 cut(s)	887, 1055, 1164, 1180
BspCNI	CTCAG	5 cut(s)	388, 670, 700, 1268, 1349
BspFNI	CGCG	1 cut(s)	1137
BspLI	GGNNCC	4 cut(s)	809, 960, 1333, 1569
BspMAI	CTGCAG	2 cut(s)	31, 424
BspPI	GGATC	5 cut(s)	198, 520, 953, 966, 1498
BspQI	GCTCTTC	1 cut(s)	1125
BspT104I	TTCGAA	1 cut(s)	932
BsrDI	GCAATG	3 cut(s)	420, 1323, 1636
BsrFI	RCCGGY	1 cut(s)	1176
BsrGI	TGTACA	1 cut(s)	670
BsrI	ACTGG	6 cut(s)	363, 478, 809, 980, 1165, 1437
BssAI	RCCGGY	1 cut(s)	1176
BssECI	CCNNGG	8 cut(s)	57, 207, 490, 491, 541, 888, 1016, 1574
BssMI	GATC	6 cut(s)	70, 163, 190, 525, 958, 1490
BssSI	CACGAG	1 cut(s)	666
BssT1I	CCWWGG	5 cut(s)	57, 207, 888, 1016, 1574
Bst2BI	CACGAG	1 cut(s)	666
Bst2UI	CCWGG	1 cut(s)	629
Bst4CI	ACNGT	2 cut(s)	661, 1289
Bst6I	CTCTTC	4 cut(s)	282, 871, 934, 1125
BstAPI	GCANNNNNTGC	3 cut(s)	371, 419, 1079
BstAUI	TGTACA	1 cut(s)	670
BstBI	TTCGAA	1 cut(s)	932
BstC8I	GCNNGC	7 cut(s)	383, 653, 1075, 1178, 1363, 1367, 1438
BstDEI	CTNAG	8 cut(s)	375, 678, 708, 825, 870, 1255, 1336, 1596
BstDSI	CCRYGG	1 cut(s)	1016
BstENI	CCTNNNNNAGG	1 cut(s)	1060
BstF5I	GGATG	6 cut(s)	127, 268, 376, 921, 943, 1008
BstFNI	CGCG	1 cut(s)	1137
BstH2I	RGCGCY	1 cut(s)	725
BstHHI	GCGC	2 cut(s)	247, 724
BstKTI	GATC	6 cut(s)	73, 166, 193, 528, 961, 1493
BstMAI	GTCTC	2 cut(s)	473, 792
BstMBI	GATC	6 cut(s)	70, 163, 190, 525, 958, 1490
BstNI	CCWGG	1 cut(s)	629
BstNSI	RCATGY	2 cut(s)	389, 655
BstSCI	CCNGG	4 cut(s)	489, 490, 627, 1050
BstSFI	CTRYAG	3 cut(s)	27, 420, 848
BstSLI	GKGCMC	1 cut(s)	549
BstUI	CGCG	1 cut(s)	1137
BstV1I	GCAGC	9 cut(s)	406, 424, 427, 436, 527, 853, 994, 1082, 1616
BstV2I	GAAGAC	1 cut(s)	1424
BstX2I	RGATCY	2 cut(s)	525, 958
BstXI	CCANNNNNNTGG	1 cut(s)	415
BstYI	RGATCY	2 cut(s)	525, 958
Bsu36I	CCTNAGG	1 cut(s)	1596
BsuRI	GGCC	4 cut(s)	887, 1055, 1164, 1180
BtgI	CCRYGG	1 cut(s)	1016
BtsCI	GGATG	6 cut(s)	127, 268, 376, 921, 943, 1008
BtsI	GCAGTG	1 cut(s)	36
BtsIMutI	CAGTG	4 cut(s)	36, 471, 973, 1294
Cac8I	GCNNGC	7 cut(s)	383, 653, 1075, 1178, 1363, 1367, 1438
CfoI	GCGC	2 cut(s)	247, 724
Cfr10I	RCCGGY	1 cut(s)	1176
Cfr13I	GGNCC	3 cut(s)	1053, 1332, 1568
Cfr9I	CCCGGG	1 cut(s)	490
Csp6I	GTAC	3 cut(s)	464, 671, 1281
CspCI	CAANNNNNGTGG	4 cut(s)	223, 258, 962, 997
CviAII	CATG	8 cut(s)	167, 185, 194, 386, 652, 955, 1017, 1230
CviQI	GTAC	3 cut(s)	464, 671, 1281
DdeI	CTNAG	8 cut(s)	375, 678, 708, 825, 870, 1255, 1336, 1596
DpnI	GATC	6 cut(s)	72, 165, 192, 527, 960, 1492
DpnII	GATC	6 cut(s)	70, 163, 190, 525, 958, 1490
EaeI	YGGCCR	1 cut(s)	1162
Eam1104I	CTCTTC	4 cut(s)	282, 871, 934, 1125
EarI	CTCTTC	4 cut(s)	282, 871, 934, 1125
Ecl136II	GAGCTC	1 cut(s)	1446
Eco130I	CCWWGG	5 cut(s)	57, 207, 888, 1016, 1574
Eco147I	AGGCCT	1 cut(s)	887
Eco24I	GRGCYC	1 cut(s)	1448
Eco47I	GGWCC	2 cut(s)	1332, 1568
Eco53kI	GAGCTC	1 cut(s)	1446
Eco57I	CTGAAG	3 cut(s)	710, 1185, 1356
Eco81I	CCTNAGG	1 cut(s)	1596
Eco88I	CYCGRG	4 cut(s)	444, 490, 1441, 1564
EcoICRI	GAGCTC	1 cut(s)	1446
EcoNI	CCTNNNNNAGG	1 cut(s)	1060
EcoO109I	RGGNCCY	2 cut(s)	1332, 1568
EcoRII	CCWGG	1 cut(s)	627
EcoT14I	CCWWGG	5 cut(s)	57, 207, 888, 1016, 1574
EcoT22I	ATGCAT	1 cut(s)	653
EcoT38I	GRGCYC	1 cut(s)	1448
ErhI	CCWWGG	5 cut(s)	57, 207, 888, 1016, 1574
Esp3I	CGTCTC	1 cut(s)	473
FaeI	CATG	8 cut(s)	170, 188, 197, 389, 655, 958, 1020, 1233
FalI	AAGNNNNNCTT	2 cut(s)	1354, 1386
FaqI	GGGAC	1 cut(s)	1277
FatI	CATG	8 cut(s)	166, 184, 193, 385, 651, 954, 1016, 1229
FauI	CCCGC	1 cut(s)	1253
FblI	GTMKAC	2 cut(s)	144, 180
FokI	GGATG	6 cut(s)	134, 255, 383, 928, 930, 1015
FriOI	GRGCYC	1 cut(s)	1448
FspBI	CTAG	2 cut(s)	1185, 1575
GlaI	GCGC	2 cut(s)	246, 723
GsaI	CCCAGC	1 cut(s)	966
GsuI	CTGGAG	2 cut(s)	380, 1258
HaeII	RGCGCY	1 cut(s)	725
HaeIII	GGCC	4 cut(s)	887, 1055, 1164, 1180
HapII	CCGG	3 cut(s)	491, 1051, 1177
HhaI	GCGC	2 cut(s)	247, 724
Hin1II	CATG	8 cut(s)	170, 188, 197, 389, 655, 958, 1020, 1233
Hin6I	GCGC	2 cut(s)	245, 722
HinP1I	GCGC	2 cut(s)	245, 722
HindIII	AAGCTT	1 cut(s)	1110
HpaII	CCGG	3 cut(s)	491, 1051, 1177
HphI	GGTGA	4 cut(s)	320, 598, 1096, 1488
Hpy166II	GTNNAC	5 cut(s)	145, 181, 391, 671, 1132
Hpy188I	TCNGA	8 cut(s)	75, 378, 542, 679, 709, 912, 1039, 1300
Hpy188III	TCNNGA	5 cut(s)	523, 529, 1124, 1275, 1428
Hpy8I	GTNNAC	5 cut(s)	145, 181, 391, 671, 1132
HpyAV	CCTTC	4 cut(s)	1161, 1209, 1380, 1389
HpyCH4III	ACNGT	2 cut(s)	661, 1289
HpyCH4IV	ACGT	3 cut(s)	177, 466, 950
HpyF3I	CTNAG	8 cut(s)	375, 678, 708, 825, 870, 1255, 1336, 1596
HpySE526I	ACGT	3 cut(s)	177, 466, 950
Hsp92II	CATG	8 cut(s)	170, 188, 197, 389, 655, 958, 1020, 1233
HspAI	GCGC	2 cut(s)	245, 722
KroI	GCCGGC	1 cut(s)	1176
KroNI	GCCGGC	1 cut(s)	1178
Kzo9I	GATC	6 cut(s)	70, 163, 190, 525, 958, 1490
LguI	GCTCTTC	1 cut(s)	1125
LmnI	GCTCC	2 cut(s)	1300, 1595
Lsp1109I	GCAGC	9 cut(s)	406, 424, 427, 436, 527, 853, 994, 1082, 1616
LweI	GCATC	2 cut(s)	361, 1091
MaeI	CTAG	2 cut(s)	1185, 1575
MaeII	ACGT	3 cut(s)	177, 466, 950
MaeIII	GTNAC	2 cut(s)	1425, 1494
MalI	GATC	6 cut(s)	72, 165, 192, 527, 960, 1492
MboI	GATC	6 cut(s)	70, 163, 190, 525, 958, 1490
MflI	RGATCY	2 cut(s)	525, 958
MhlI	GDGCHC	2 cut(s)	549, 1448
MlsI	TGGCCA	1 cut(s)	1164
MluCI	AATT	1 cut(s)	353
MluNI	TGGCCA	1 cut(s)	1164
MlyI	GAGTC	2 cut(s)	475, 1265
MmeI	TCCRAC	2 cut(s)	962, 1278
Mox20I	TGGCCA	1 cut(s)	1164
Mph1103I	ATGCAT	1 cut(s)	653
MroNI	GCCGGC	1 cut(s)	1176
MscI	TGGCCA	1 cut(s)	1164
MseI	TTAA	2 cut(s)	621, 644
MslI	CAYNNNNRTG	2 cut(s)	413, 646
Msp20I	TGGCCA	1 cut(s)	1164
MspI	CCGG	3 cut(s)	491, 1051, 1177
MspR9I	CCNGG	4 cut(s)	491, 492, 629, 1052
Mva1269I	GAATGC	1 cut(s)	536
MvaI	CCWGG	1 cut(s)	629
MvnI	CGCG	1 cut(s)	1137
NaeI	GCCGGC	1 cut(s)	1178
NciI	CCSGG	3 cut(s)	491, 492, 1052
NcoI	CCATGG	1 cut(s)	1016
NdeII	GATC	6 cut(s)	70, 163, 190, 525, 958, 1490
NgoMIV	GCCGGC	1 cut(s)	1176
NlaIII	CATG	8 cut(s)	170, 188, 197, 389, 655, 958, 1020, 1233
NlaIV	GGNNCC	4 cut(s)	809, 960, 1333, 1569
NmuCI	GTSAC	2 cut(s)	1425, 1494
NsiI	ATGCAT	1 cut(s)	653
NspI	RCATGY	2 cut(s)	389, 655
NspV	TTCGAA	1 cut(s)	932
PaeI	GCATGC	1 cut(s)	655
PceI	AGGCCT	1 cut(s)	887
PciSI	GCTCTTC	1 cut(s)	1125
PctI	GAATGC	1 cut(s)	536
PdiI	GCCGGC	1 cut(s)	1178
PfeI	GAWTC	8 cut(s)	53, 215, 229, 314, 682, 715, 736, 1305
PflFI	GACNNNGTC	1 cut(s)	1423
PleI	GAGTC	2 cut(s)	475, 1265
PpsI	GAGTC	2 cut(s)	475, 1265
PpuMI	RGGWCCY	2 cut(s)	1332, 1568
Psp124BI	GAGCTC	1 cut(s)	1448
Psp5II	RGGWCCY	2 cut(s)	1332, 1568
Psp6I	CCWGG	1 cut(s)	627
PspFI	CCCAGC	1 cut(s)	962
PspGI	CCWGG	1 cut(s)	627
PspN4I	GGNNCC	4 cut(s)	809, 960, 1333, 1569
PspPI	GGNCC	3 cut(s)	1053, 1332, 1568
PspPPI	RGGWCCY	2 cut(s)	1332, 1568
PstI	CTGCAG	2 cut(s)	31, 424
PsuI	RGATCY	2 cut(s)	525, 958
PsyI	GACNNNGTC	1 cut(s)	1423
RsaI	GTAC	3 cut(s)	465, 672, 1282
RsaNI	GTAC	3 cut(s)	464, 671, 1281
RseI	CAYNNNNRTG	2 cut(s)	413, 646
SacI	GAGCTC	1 cut(s)	1448
SapI	GCTCTTC	1 cut(s)	1125
SaqAI	TTAA	2 cut(s)	621, 644
Sau3AI	GATC	6 cut(s)	70, 163, 190, 525, 958, 1490
Sau96I	GGNCC	3 cut(s)	1053, 1332, 1568
ScaI	AGTACT	1 cut(s)	1282
SchI	GAGTC	2 cut(s)	475, 1265
ScrFI	CCNGG	4 cut(s)	491, 492, 629, 1052
SduI	GDGCHC	2 cut(s)	549, 1448
SfaNI	GCATC	2 cut(s)	361, 1091
SfcI	CTRYAG	3 cut(s)	27, 420, 848
SfuI	TTCGAA	1 cut(s)	932
SinI	GGWCC	2 cut(s)	1332, 1568
SmaI	CCCGGG	1 cut(s)	492
SmiMI	CAYNNNNRTG	2 cut(s)	413, 646
SmlI	CTYRAG	1 cut(s)	1060
SmoI	CTYRAG	1 cut(s)	1060
SphI	GCATGC	1 cut(s)	655
Sse9I	AATT	1 cut(s)	353
SseBI	AGGCCT	1 cut(s)	887
SsiI	CCGC	7 cut(s)	401, 428, 1097, 1135, 1260, 1522, 1584
SspMI	CTAG	2 cut(s)	1185, 1575
SstI	GAGCTC	1 cut(s)	1448
StuI	AGGCCT	1 cut(s)	887
StyD4I	CCNGG	4 cut(s)	489, 490, 627, 1050
StyI	CCWWGG	5 cut(s)	57, 207, 888, 1016, 1574
TaaI	ACNGT	2 cut(s)	661, 1289
TaiI	ACGT	3 cut(s)	180, 469, 953
TaqI	TCGA	2 cut(s)	351, 932
TasI	AATT	1 cut(s)	353
TatI	WGTACW	2 cut(s)	670, 1280
TauI	GCSGC	2 cut(s)	431, 1525
TfiI	GAWTC	8 cut(s)	53, 215, 229, 314, 682, 715, 736, 1305
Tru1I	TTAA	2 cut(s)	621, 644
Tru9I	TTAA	2 cut(s)	621, 644
TscAI	CASTG	4 cut(s)	36, 478, 980, 1294
TseFI	GTSAC	2 cut(s)	1425, 1494
TseI	GCWGC	9 cut(s)	419, 437, 440, 449, 515, 866, 1007, 1070, 1604
Tsp45I	GTSAC	2 cut(s)	1425, 1494
TspDTI	ATGAA	3 cut(s)	888, 943, 1215
TspMI	CCCGGG	1 cut(s)	490
TspRI	CASTG	4 cut(s)	36, 478, 980, 1294
Tth111I	GACNNNGTC	1 cut(s)	1423
VpaK11BI	GGWCC	2 cut(s)	1332, 1568
XagI	CCTNNNNNAGG	1 cut(s)	1060
XceI	RCATGY	2 cut(s)	389, 655
XcmI	CCANNNNNNNNNTGG	2 cut(s)	191, 1227
XmaI	CCCGGG	1 cut(s)	490
XmaJI	CCTAGG	1 cut(s)	1574
XmiI	GTMKAC	2 cut(s)	144, 180
XspI	CTAG	2 cut(s)	1185, 1575
ZrmI	AGTACT	1 cut(s)	1282
Zsp2I	ATGCAT	1 cut(s)	653

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.