Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0012650

Physical Location & Seq

Genomic Coordinates Forward (+)

56106639 .. 56109105

Gene Structure 2467 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G028400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGGGGAGGAAAGGGAGTTGGTTTTCTGCAGTGAAGAAAGCCCTCAACCCTGAATCCAAGGAAAAGAAAGATCAGAAATCCAAGTCAAAGAAAAAATGGTTTGGGAAAAACAAGAATGTGGATGAGGATTATGAGGAAAATGTAGACCACTTGAAAAATGCAGATCATGTGGAAAACGAAGAATCTGCATTTGTGATTCCCACTTCTTTTGCGCCACCTCCTCCTCCACCACCTCATCCTACTCTTCCTCCAATAAAAGAGAAGTTAGAGGAGGGTGAGGATTCACAGAGAACCTCTCTTGCTCTAAAGGAAGATGTCGAATTACTGGAGGCAGAGGATGCTCAGAGCAAGCATGTTTACTCTGTGGCGGTCGCCACAGCAATGGCTGCAGAGGCGGCTGTTGCTGCTGCTCGGGCTGCCGTAGAGGTTGTACGTCTCACTGGGCTGACTCATTTCCCGGGGAAATCTTTGGAGGAGGTAGCAGCCATCAAGATCCAGACGGCATTCCGAGGGCACTTGGCAAGGAGGGCATTACGGGCTTTGAGAGGGTTGGTGAGGTTGAAATCATTGGTAGAGGGTCAATCTGTTAAACGCCAGGCAACTACCACATTAAAATGCATGCAGACCGTTGCTCGTGTACAATCTGAGATTCGTGCAAGGAGGATTAGAATGTCTGAGGAGAATCAGGCGCTTCAGCGACAGATTCAACAGAAACAAGACAAAGAGTTGAAAGAGATGGAGAAACACAGAGTTGCTTCTATTGGAGACAACTGGAACCATAGCCCCCAATCTAAGGAGGAGGTTGAGGCAAAGCTACAGAGCAGACAAGAGGCTGCTAAGAGAAGAGAAAAGGCCTTGGCTTATTCATTCTCTCATCAGAGGATGTGGAAGAACTCTTCGAAATCTCAACATCCTACGTTCATGGATCCCAGCAATCCCCACTGGGGTTGGAGTTGGTTAGAGAGATGGATGGCTGCAAGACCATGGGAGAGCCAAAGCACATCAGACTACAATGACCGGGCCTCCTTGAGGAGTGCAGCAAGCCGTGCATCAATGTCAGTTGCGGAAATCACCAAAGCTTATGCTCTTCGTGATGTCCACCACGATAACAAGCCTCCTTCCCCAACTGGCCAAAAATCAAGCCGGCCTCCTAGTCGCCAATCCCCTTCAGCTCTTACCAAGACACCATCTTCATCATGGAGAACCCCAAAAAAGAATGGCTCAGGCGGGGACGAGGACTCCAGAAGTACTTACAGTGTGCAGTCGGAGCGATTCAACAGGAGGCATAGCATTGCAGGGTCCTCAGTAAGAGATGATCAGAGCCTTGCAAGCACGCCTTCAGTTCCTTCTTCAAAAAGATACTTGACACCCTCAACGAAGACAAGGTCACGACTAGCAAGCCCGAGCTCATCGGGGTTAGAAAAGAACAGGACACCAACACCAGACAAGGGATCGTCACCATCAGTCAGTTCTGTGAAGAAGCGGCTGTCTTACTCTGCTTCCCCTGCTGGACAAAGGAGGCACTCGGGTCCTCCTAGGGTCGGCGGTAGCTCCCCTAAGGGTGCAGCTCACACAGAGAAGAAAGTTAGCAATGGTTGGGGAAGCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005856 GO:0005874 GO:0008017 GO:0008092 GO:0015630 GO:0015631 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4005 IQ

Protein Analysis

536

Amino Acids

59.45

Weight (kDa)

10.09

Isoelectric Point (pI)

65.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012650)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g20080 FvH4_7g20080
malus_domestica	MD07G1178400.v1.1
prunus_persica	Prupe.2G217600_v2.0.a1 Prupe.2G217600_v2.0.a1 Prupe.2G217600_v2.0.a1 Prupe.2G217600_v2.0.a1
pyrus_communis	pycom01g13920 pycom07g17210
rosa_chinensis	RchiOBHm_Chr1g0364041
rosa_laevigata	RLG00000027522
rosa_multiflora	Rmu_sc0009677.1_g000016
rosa_roxburghii	Rroxscaffold_4G00292710
rosa_rugosa	Rorug01G0313100
rosa_samantha	Rh1AG320400 Rh1BG283600 Rh1CG300000 Rh1DG315100
rosa_wichuraiana	Rw1G028400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	144
AciI	CCGC	6 cut(s)	368, 395, 1064, 1227, 1483, 1545
AclWI	GGATC	4 cut(s)	487, 920, 933, 1459
AcoI	YGGCCR	1 cut(s)	1129
AcuI	CTGAAG	3 cut(s)	677, 1152, 1323
AfaI	GTAC	3 cut(s)	432, 639, 1249
AfiI	CCNNNNNNNGG	5 cut(s)	793, 944, 1029, 1448, 1541
AgsI	TTSAA	6 cut(s)	154, 562, 707, 730, 1276, 1353
AjnI	CCWGG	1 cut(s)	594
AluBI	AGCT	6 cut(s)	814, 1079, 1172, 1407, 1551, 1568
AluI	AGCT	6 cut(s)	814, 1079, 1172, 1407, 1551, 1568
Alw21I	GWGCWC	1 cut(s)	1409
Alw26I	GTCTC	2 cut(s)	440, 759
AlwI	GGATC	4 cut(s)	487, 920, 933, 1459
Ama87I	CYCGRG	4 cut(s)	411, 457, 1402, 1525
AoxI	GGCC	4 cut(s)	852, 1020, 1129, 1145
ApeKI	GCWGC	9 cut(s)	386, 404, 407, 416, 482, 833, 974, 1037, 1565
ArsI	GACNNNNNNTTYG	2 cut(s)	1370, 1402
AspA2I	CCTAGG	1 cut(s)	1535
AspLEI	GCGC	2 cut(s)	214, 691
AspS9I	GGNCC	3 cut(s)	1020, 1299, 1529
AsuC2I	CCSGG	3 cut(s)	458, 459, 1019
AsuHPI	GGTGA	4 cut(s)	287, 565, 1063, 1449
AsuII	TTCGAA	1 cut(s)	899
AvaI	CYCGRG	4 cut(s)	411, 457, 1402, 1525
AvaII	GGWCC	2 cut(s)	1299, 1529
AvrII	CCTAGG	1 cut(s)	1535
AxyI	CCTNAGG	1 cut(s)	1557
BaeGI	GKGCMC	1 cut(s)	516
BalI	TGGCCA	1 cut(s)	1131
BamHI	GGATCC	1 cut(s)	925
BanII	GRGCYC	1 cut(s)	1409
BauI	CACGAG	1 cut(s)	633
BbsI	GAAGAC	1 cut(s)	1385
Bbv12I	GWGCWC	1 cut(s)	1409
BbvI	GCAGC	9 cut(s)	373, 391, 394, 403, 494, 820, 961, 1049, 1577
BccI	CCATC	6 cut(s)	494, 730, 960, 964, 1195, 1468
BceAI	ACGGC	3 cut(s)	404, 516, 1029
BcgI	CGANNNNNNTGC	2 cut(s)	167, 201
BciT130I	CCWGG	1 cut(s)	596
BclI	TGATCA	1 cut(s)	1315
BcnI	CCSGG	3 cut(s)	458, 459, 1019
BcoDI	GTCTC	2 cut(s)	440, 759
BfaI	CTAG	3 cut(s)	1152, 1394, 1536
BfmI	CTRYAG	3 cut(s)	27, 387, 815
BfoI	RGCGCY	1 cut(s)	692
BlnI	CCTAGG	1 cut(s)	1535
BmcAI	AGTACT	1 cut(s)	1249
Bme1390I	CCNGG	4 cut(s)	458, 459, 596, 1019
Bme18I	GGWCC	2 cut(s)	1299, 1529
BmeT110I	CYCGRG	4 cut(s)	411, 457, 1402, 1525
BmgT120I	GGNCC	3 cut(s)	1020, 1299, 1529
BmiI	GGNNCC	4 cut(s)	776, 927, 1300, 1530
BmrFI	CCNGG	4 cut(s)	458, 459, 596, 1019
BmrI	ACTGGG	2 cut(s)	450, 952
BmsI	GCATC	2 cut(s)	328, 1058
BmuI	ACTGGG	2 cut(s)	450, 952
BpiI	GAAGAC	1 cut(s)	1385
BplI	GAGNNNNNCTC	2 cut(s)	280, 312
BpmI	CTGGAG	2 cut(s)	347, 1225
Bpu10I	CCTNAGC	1 cut(s)	1222
Bpu14I	TTCGAA	1 cut(s)	899
BpuEI	CTTGAG	1 cut(s)	1048
BpuMI	CCSGG	3 cut(s)	458, 459, 1019
BsaJI	CCNNGG	7 cut(s)	57, 457, 458, 508, 855, 983, 1535
BsaXI	ACNNNNNCTCC	6 cut(s)	232, 262, 1007, 1037, 1223, 1253
Bsc4I	CCNNNNNNNGG	5 cut(s)	793, 944, 1029, 1448, 1541
Bse118I	RCCGGY	1 cut(s)	1143
Bse1I	ACTGG	5 cut(s)	330, 445, 776, 947, 1132
Bse21I	CCTNAGG	1 cut(s)	1557
Bse3DI	GCAATG	3 cut(s)	387, 1290, 1597
BseBI	CCWGG	1 cut(s)	596
BseDI	CCNNGG	7 cut(s)	57, 457, 458, 508, 855, 983, 1535
BseGI	GGATG	6 cut(s)	127, 235, 343, 888, 910, 975
BseLI	CCNNNNNNNGG	5 cut(s)	793, 944, 1029, 1448, 1541
BseMI	GCAATG	3 cut(s)	387, 1290, 1597
BseMII	CTCAG	5 cut(s)	356, 636, 666, 1236, 1317
BseNI	ACTGG	5 cut(s)	330, 445, 776, 947, 1132
BseRI	GAGGAG	7 cut(s)	210, 213, 284, 488, 692, 812, 1045
BseSI	GKGCMC	1 cut(s)	516
BseXI	GCAGC	9 cut(s)	373, 391, 394, 403, 494, 820, 961, 1049, 1577
BseYI	CCCAGC	1 cut(s)	929
BsgI	GTGCAG	3 cut(s)	1056, 1280, 1584
Bsh1285I	CGRYCG	1 cut(s)	372
BshFI	GGCC	4 cut(s)	854, 1022, 1131, 1147
BsiEI	CGRYCG	1 cut(s)	372
BsiHKAI	GWGCWC	1 cut(s)	1409
BsiHKCI	CYCGRG	4 cut(s)	411, 457, 1402, 1525
BsiSI	CCGG	3 cut(s)	458, 1018, 1144
BslFI	GGGAC	1 cut(s)	1244
BslI	CCNNNNNNNGG	5 cut(s)	793, 944, 1029, 1448, 1541
BsmAI	GTCTC	2 cut(s)	440, 759
BsmBI	CGTCTC	1 cut(s)	440
BsmFI	GGGAC	1 cut(s)	1244
BsmI	GAATGC	1 cut(s)	503
BsnI	GGCC	4 cut(s)	854, 1022, 1131, 1147
BsoBI	CYCGRG	4 cut(s)	411, 457, 1402, 1525
Bsp119I	TTCGAA	1 cut(s)	899
Bsp1286I	GDGCHC	2 cut(s)	516, 1409
Bsp1407I	TGTACA	1 cut(s)	637
Bsp143I	GATC	6 cut(s)	70, 163, 492, 925, 1315, 1451
Bsp19I	CCATGG	1 cut(s)	983
BspACI	CCGC	6 cut(s)	368, 395, 1064, 1227, 1483, 1545
BspANI	GGCC	4 cut(s)	854, 1022, 1131, 1147
BspCNI	CTCAG	5 cut(s)	355, 637, 667, 1235, 1316
BspLI	GGNNCC	4 cut(s)	776, 927, 1300, 1530
BspMAI	CTGCAG	2 cut(s)	31, 391
BspPI	GGATC	4 cut(s)	487, 920, 933, 1459
BspQI	GCTCTTC	1 cut(s)	1092
BspT104I	TTCGAA	1 cut(s)	899
BsrDI	GCAATG	3 cut(s)	387, 1290, 1597
BsrFI	RCCGGY	1 cut(s)	1143
BsrGI	TGTACA	1 cut(s)	637
BsrI	ACTGG	5 cut(s)	330, 445, 776, 947, 1132
BssAI	RCCGGY	1 cut(s)	1143
BssECI	CCNNGG	7 cut(s)	57, 457, 458, 508, 855, 983, 1535
BssMI	GATC	6 cut(s)	70, 163, 492, 925, 1315, 1451
BssSI	CACGAG	1 cut(s)	633
BssT1I	CCWWGG	4 cut(s)	57, 855, 983, 1535
Bst2BI	CACGAG	1 cut(s)	633
Bst2UI	CCWGG	1 cut(s)	596
Bst4CI	ACNGT	2 cut(s)	628, 1256
Bst6I	CTCTTC	4 cut(s)	249, 838, 901, 1092
BstAPI	GCANNNNNTGC	3 cut(s)	338, 386, 1046
BstAUI	TGTACA	1 cut(s)	637
BstBI	TTCGAA	1 cut(s)	899
BstC8I	GCNNGC	7 cut(s)	350, 620, 1042, 1145, 1330, 1334, 1399
BstDEI	CTNAG	8 cut(s)	342, 645, 675, 792, 837, 1222, 1303, 1557
BstDSI	CCRYGG	1 cut(s)	983
BstENI	CCTNNNNNAGG	1 cut(s)	1027
BstF5I	GGATG	6 cut(s)	127, 235, 343, 888, 910, 975
BstH2I	RGCGCY	1 cut(s)	692
BstHHI	GCGC	2 cut(s)	214, 691
BstKTI	GATC	6 cut(s)	73, 166, 495, 928, 1318, 1454
BstMAI	GTCTC	2 cut(s)	440, 759
BstMBI	GATC	6 cut(s)	70, 163, 492, 925, 1315, 1451
BstMCI	CGRYCG	1 cut(s)	372
BstNI	CCWGG	1 cut(s)	596
BstNSI	RCATGY	2 cut(s)	356, 622
BstSCI	CCNGG	4 cut(s)	456, 457, 594, 1017
BstSFI	CTRYAG	3 cut(s)	27, 387, 815
BstSLI	GKGCMC	1 cut(s)	516
BstV1I	GCAGC	9 cut(s)	373, 391, 394, 403, 494, 820, 961, 1049, 1577
BstV2I	GAAGAC	1 cut(s)	1385
BstX2I	RGATCY	2 cut(s)	492, 925
BstXI	CCANNNNNNTGG	1 cut(s)	382
BstYI	RGATCY	2 cut(s)	492, 925
Bsu36I	CCTNAGG	1 cut(s)	1557
BsuRI	GGCC	4 cut(s)	854, 1022, 1131, 1147
BtgI	CCRYGG	1 cut(s)	983
BtsCI	GGATG	6 cut(s)	127, 235, 343, 888, 910, 975
BtsI	GCAGTG	1 cut(s)	36
BtsIMutI	CAGTG	4 cut(s)	36, 438, 940, 1261
Cac8I	GCNNGC	7 cut(s)	350, 620, 1042, 1145, 1330, 1334, 1399
CfoI	GCGC	2 cut(s)	214, 691
Cfr10I	RCCGGY	1 cut(s)	1143
Cfr13I	GGNCC	3 cut(s)	1020, 1299, 1529
Cfr9I	CCCGGG	1 cut(s)	457
Csp6I	GTAC	3 cut(s)	431, 638, 1248
CspCI	CAANNNNNGTGG	4 cut(s)	190, 225, 929, 964
CviAII	CATG	6 cut(s)	167, 353, 619, 922, 984, 1197
CviQI	GTAC	3 cut(s)	431, 638, 1248
DdeI	CTNAG	8 cut(s)	342, 645, 675, 792, 837, 1222, 1303, 1557
DpnI	GATC	6 cut(s)	72, 165, 494, 927, 1317, 1453
DpnII	GATC	6 cut(s)	70, 163, 492, 925, 1315, 1451
EaeI	YGGCCR	1 cut(s)	1129
Eam1104I	CTCTTC	4 cut(s)	249, 838, 901, 1092
EarI	CTCTTC	4 cut(s)	249, 838, 901, 1092
Ecl136II	GAGCTC	1 cut(s)	1407
Eco130I	CCWWGG	4 cut(s)	57, 855, 983, 1535
Eco147I	AGGCCT	1 cut(s)	854
Eco24I	GRGCYC	1 cut(s)	1409
Eco47I	GGWCC	2 cut(s)	1299, 1529
Eco53kI	GAGCTC	1 cut(s)	1407
Eco57I	CTGAAG	3 cut(s)	677, 1152, 1323
Eco81I	CCTNAGG	1 cut(s)	1557
Eco88I	CYCGRG	4 cut(s)	411, 457, 1402, 1525
EcoICRI	GAGCTC	1 cut(s)	1407
EcoNI	CCTNNNNNAGG	1 cut(s)	1027
EcoO109I	RGGNCCY	2 cut(s)	1299, 1529
EcoRII	CCWGG	1 cut(s)	594
EcoT14I	CCWWGG	4 cut(s)	57, 855, 983, 1535
EcoT22I	ATGCAT	1 cut(s)	620
EcoT38I	GRGCYC	1 cut(s)	1409
ErhI	CCWWGG	4 cut(s)	57, 855, 983, 1535
Esp3I	CGTCTC	1 cut(s)	440
FaeI	CATG	6 cut(s)	170, 356, 622, 925, 987, 1200
FalI	AAGNNNNNCTT	2 cut(s)	1321, 1353
FaqI	GGGAC	1 cut(s)	1244
FatI	CATG	6 cut(s)	166, 352, 618, 921, 983, 1196
FauI	CCCGC	1 cut(s)	1220
FbaI	TGATCA	1 cut(s)	1315
FblI	GTMKAC	1 cut(s)	144
FokI	GGATG	6 cut(s)	134, 222, 350, 895, 897, 982
FriOI	GRGCYC	1 cut(s)	1409
FspBI	CTAG	3 cut(s)	1152, 1394, 1536
GlaI	GCGC	2 cut(s)	213, 690
GsaI	CCCAGC	1 cut(s)	933
GsuI	CTGGAG	2 cut(s)	347, 1225
HaeII	RGCGCY	1 cut(s)	692
HaeIII	GGCC	4 cut(s)	854, 1022, 1131, 1147
HapII	CCGG	3 cut(s)	458, 1018, 1144
HhaI	GCGC	2 cut(s)	214, 691
Hin1II	CATG	6 cut(s)	170, 356, 622, 925, 987, 1200
Hin6I	GCGC	2 cut(s)	212, 689
HinP1I	GCGC	2 cut(s)	212, 689
HindIII	AAGCTT	1 cut(s)	1077
HpaII	CCGG	3 cut(s)	458, 1018, 1144
HphI	GGTGA	4 cut(s)	287, 565, 1063, 1449
Hpy166II	GTNNAC	4 cut(s)	145, 358, 638, 1099
Hpy188I	TCNGA	9 cut(s)	75, 345, 509, 646, 676, 879, 1006, 1267, 1320
Hpy188III	TCNNGA	5 cut(s)	490, 496, 1091, 1242, 1389
Hpy8I	GTNNAC	4 cut(s)	145, 358, 638, 1099
HpyAV	CCTTC	4 cut(s)	1128, 1176, 1347, 1356
HpyCH4III	ACNGT	2 cut(s)	628, 1256
HpyCH4IV	ACGT	2 cut(s)	433, 917
HpyF3I	CTNAG	8 cut(s)	342, 645, 675, 792, 837, 1222, 1303, 1557
HpySE526I	ACGT	2 cut(s)	433, 917
Hsp92II	CATG	6 cut(s)	170, 356, 622, 925, 987, 1200
HspAI	GCGC	2 cut(s)	212, 689
KroI	GCCGGC	1 cut(s)	1143
KroNI	GCCGGC	1 cut(s)	1145
Ksp22I	TGATCA	1 cut(s)	1315
Kzo9I	GATC	6 cut(s)	70, 163, 492, 925, 1315, 1451
LguI	GCTCTTC	1 cut(s)	1092
LmnI	GCTCC	2 cut(s)	1267, 1556
Lsp1109I	GCAGC	9 cut(s)	373, 391, 394, 403, 494, 820, 961, 1049, 1577
LweI	GCATC	2 cut(s)	328, 1058
MaeI	CTAG	3 cut(s)	1152, 1394, 1536
MaeII	ACGT	2 cut(s)	433, 917
MaeIII	GTNAC	2 cut(s)	1386, 1455
MalI	GATC	6 cut(s)	72, 165, 494, 927, 1317, 1453
MboI	GATC	6 cut(s)	70, 163, 492, 925, 1315, 1451
MflI	RGATCY	2 cut(s)	492, 925
MhlI	GDGCHC	2 cut(s)	516, 1409
MlsI	TGGCCA	1 cut(s)	1131
MluCI	AATT	1 cut(s)	320
MluNI	TGGCCA	1 cut(s)	1131
MlyI	GAGTC	2 cut(s)	442, 1232
MmeI	TCCRAC	2 cut(s)	929, 1245
Mox20I	TGGCCA	1 cut(s)	1131
Mph1103I	ATGCAT	1 cut(s)	620
MroNI	GCCGGC	1 cut(s)	1143
MscI	TGGCCA	1 cut(s)	1131
MseI	TTAA	2 cut(s)	588, 611
MslI	CAYNNNNRTG	2 cut(s)	380, 613
Msp20I	TGGCCA	1 cut(s)	1131
MspI	CCGG	3 cut(s)	458, 1018, 1144
MspR9I	CCNGG	4 cut(s)	458, 459, 596, 1019
Mva1269I	GAATGC	1 cut(s)	503
MvaI	CCWGG	1 cut(s)	596
NaeI	GCCGGC	1 cut(s)	1145
NciI	CCSGG	3 cut(s)	458, 459, 1019
NcoI	CCATGG	1 cut(s)	983
NdeII	GATC	6 cut(s)	70, 163, 492, 925, 1315, 1451
NgoMIV	GCCGGC	1 cut(s)	1143
NlaIII	CATG	6 cut(s)	170, 356, 622, 925, 987, 1200
NlaIV	GGNNCC	4 cut(s)	776, 927, 1300, 1530
NmuCI	GTSAC	2 cut(s)	1386, 1455
NsiI	ATGCAT	1 cut(s)	620
NspI	RCATGY	2 cut(s)	356, 622
NspV	TTCGAA	1 cut(s)	899
PaeI	GCATGC	1 cut(s)	622
PceI	AGGCCT	1 cut(s)	854
PciSI	GCTCTTC	1 cut(s)	1092
PctI	GAATGC	1 cut(s)	503
PdiI	GCCGGC	1 cut(s)	1145
PfeI	GAWTC	8 cut(s)	53, 182, 196, 281, 649, 682, 703, 1272
PflFI	GACNNNGTC	1 cut(s)	1384
PleI	GAGTC	2 cut(s)	442, 1232
PpsI	GAGTC	2 cut(s)	442, 1232
PpuMI	RGGWCCY	2 cut(s)	1299, 1529
Psp124BI	GAGCTC	1 cut(s)	1409
Psp5II	RGGWCCY	2 cut(s)	1299, 1529
Psp6I	CCWGG	1 cut(s)	594
PspFI	CCCAGC	1 cut(s)	929
PspGI	CCWGG	1 cut(s)	594
PspN4I	GGNNCC	4 cut(s)	776, 927, 1300, 1530
PspPI	GGNCC	3 cut(s)	1020, 1299, 1529
PspPPI	RGGWCCY	2 cut(s)	1299, 1529
PstI	CTGCAG	2 cut(s)	31, 391
PsuI	RGATCY	2 cut(s)	492, 925
PsyI	GACNNNGTC	1 cut(s)	1384
RsaI	GTAC	3 cut(s)	432, 639, 1249
RsaNI	GTAC	3 cut(s)	431, 638, 1248
RseI	CAYNNNNRTG	2 cut(s)	380, 613
SacI	GAGCTC	1 cut(s)	1409
SapI	GCTCTTC	1 cut(s)	1092
SaqAI	TTAA	2 cut(s)	588, 611
Sau3AI	GATC	6 cut(s)	70, 163, 492, 925, 1315, 1451
Sau96I	GGNCC	3 cut(s)	1020, 1299, 1529
ScaI	AGTACT	1 cut(s)	1249
SchI	GAGTC	2 cut(s)	442, 1232
ScrFI	CCNGG	4 cut(s)	458, 459, 596, 1019
SduI	GDGCHC	2 cut(s)	516, 1409
SfaNI	GCATC	2 cut(s)	328, 1058
SfcI	CTRYAG	3 cut(s)	27, 387, 815
SfuI	TTCGAA	1 cut(s)	899
SinI	GGWCC	2 cut(s)	1299, 1529
SmaI	CCCGGG	1 cut(s)	459
SmiMI	CAYNNNNRTG	2 cut(s)	380, 613
SmlI	CTYRAG	1 cut(s)	1027
SmoI	CTYRAG	1 cut(s)	1027
SphI	GCATGC	1 cut(s)	622
Sse9I	AATT	1 cut(s)	320
SseBI	AGGCCT	1 cut(s)	854
SsiI	CCGC	6 cut(s)	368, 395, 1064, 1227, 1483, 1545
SspMI	CTAG	3 cut(s)	1152, 1394, 1536
SstI	GAGCTC	1 cut(s)	1409
StuI	AGGCCT	1 cut(s)	854
StyD4I	CCNGG	4 cut(s)	456, 457, 594, 1017
StyI	CCWWGG	4 cut(s)	57, 855, 983, 1535
TaaI	ACNGT	2 cut(s)	628, 1256
TaiI	ACGT	2 cut(s)	436, 920
TaqI	TCGA	2 cut(s)	318, 899
TasI	AATT	1 cut(s)	320
TatI	WGTACW	2 cut(s)	637, 1247
TauI	GCSGC	2 cut(s)	398, 1486
TfiI	GAWTC	8 cut(s)	53, 182, 196, 281, 649, 682, 703, 1272
Tru1I	TTAA	2 cut(s)	588, 611
Tru9I	TTAA	2 cut(s)	588, 611
TscAI	CASTG	4 cut(s)	36, 445, 947, 1261
TseFI	GTSAC	2 cut(s)	1386, 1455
TseI	GCWGC	9 cut(s)	386, 404, 407, 416, 482, 833, 974, 1037, 1565
Tsp45I	GTSAC	2 cut(s)	1386, 1455
TspDTI	ATGAA	3 cut(s)	855, 910, 1182
TspMI	CCCGGG	1 cut(s)	457
TspRI	CASTG	4 cut(s)	36, 445, 947, 1261
Tth111I	GACNNNGTC	1 cut(s)	1384
VpaK11BI	GGWCC	2 cut(s)	1299, 1529
XagI	CCTNNNNNAGG	1 cut(s)	1027
XceI	RCATGY	2 cut(s)	356, 622
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1194
XmaI	CCCGGG	1 cut(s)	457
XmaJI	CCTAGG	1 cut(s)	1535
XmiI	GTMKAC	1 cut(s)	144
XspI	CTAG	3 cut(s)	1152, 1394, 1536
ZrmI	AGTACT	1 cut(s)	1249
Zsp2I	ATGCAT	1 cut(s)	620

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.