Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0004784

Physical Location & Seq

Genomic Coordinates Forward (+)

26166697 .. 26171759

Gene Structure 5063 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G243100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 852 bp

ATGTGGCCTTCATATTTACTGTTCAATAATATTATTAAGGCGGAAGATGAAGAAGAATCAGATGGAGAACATTCAAGTTTAGTTGAATCATACCCATGTGGGCAGTCATCGAGTAATGGTAAATGCCATGTTGCTGCCTTGCCATGTTCACACTTTGTTGAAGTCCCACACATTAATCAGCTAGATTCTTGGGATTGCGGCCTCGCTTGCCTTGTGATGGTTTTTCGGACTGTTGGCATAGACAGCTGCGATATTCAGACATTGGCAGAACTATGTTGCACAACTAGCATTTGGACCGTTGATCTAGCATATTTATTACAGAAGTTCTCTATCAGTTTTTCCTACTACACGGTGACATTTGGAGCAAACCCAAATTATTCTGGCGAGACATTTTACAAGGAGCAATTACCTAATGATCTGGCGCGAGTGGATACACTATTTCAAAAAGCACGGGAAGCTGGAGTTAGTATACAGTGCAGGTCAATCAGTCGAGAAGAAATTTGTTTCTTGATTTTGTGTGGGAAATACATTGCCATTGTATTGGTTGATCAGTATAAATTGAGTCGGTCTTGTTCGGACGATGTTTTTGTCTCAGACTTTTATGGAAGCAACTCTGGTTACACAGGTCACTATGTCATCATATGTGGGTATGACTCTGCTACGGATGAGTTTGAGATTAGAGATCCGGCCTGTTCAAGGAAACACGAGCGGGTGTCATCAACATGCTTAGAAGAAGCCCGGAAATCGTTTGGCACTGATGAGGATCTTCTCTTGATATCTTTGAAGAGGAGTGGGAAGCAAAATAGCCCCTTAATTCAACGTTCTGCTCGTGACAATATCGATTGCCGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Guanylate_cyc_2

Protein Analysis

284

Amino Acids

31.76

Weight (kDa)

4.84

Isoelectric Point (pI)

52.08

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004784)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05930 AT5G05930 AT5G05930 AT5G05930 AT5G05930 AT5G05930 AT5G05930
fragaria_vesca	FvH4_7g23620 FvH4_7g23620 FvH4_7g23620 FvH4_7g23620 FvH4_7g23620 FvH4_7g23620 FvH4_7g23620
malus_domestica	MD01G1142100.v1.1 MD07G1207800.v1.1
prunus_persica	Prupe.2G243100_v2.0.a1 Prupe.2G243100_v2.0.a1
pyrus_communis	pycom01g16230 pycom07g19330
rosa_chinensis	RchiOBHm_Chr1g0368881
rosa_laevigata	RLG00000027180
rosa_multiflora	Rmu_sc0004250.1_g000049
rosa_roxburghii	Rroxscaffold_4G00288240
rosa_rugosa	Rorug01G0345400 Rorug01G0345500
rosa_samantha	Rh1AG352600 Rh1BG316100 Rh1CG330800 Rh1DG347600
rosa_wichuraiana	Rw0G010000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	468
AccBSI	CCGCTC	1 cut(s)	709
AccI	GTMKAC	1 cut(s)	469
AccII	CGCG	1 cut(s)	424
AciI	CCGC	3 cut(s)	41, 198, 709
AclI	AACGTT	1 cut(s)	820
AclWI	GGATC	2 cut(s)	677, 771
AcsI	RAATTY	1 cut(s)	498
AfiI	CCNNNNNNNGG	2 cut(s)	217, 696
AgsI	TTSAA	8 cut(s)	25, 75, 86, 161, 443, 696, 784, 818
AluBI	AGCT	3 cut(s)	181, 246, 458
AluI	AGCT	3 cut(s)	181, 246, 458
Alw26I	GTCTC	2 cut(s)	380, 595
AlwI	GGATC	2 cut(s)	677, 771
AoxI	GGCC	3 cut(s)	5, 199, 687
ApeKI	GCWGC	2 cut(s)	134, 246
ApoI	RAATTY	1 cut(s)	498
ArsI	GACNNNNNNTTYG	2 cut(s)	569, 601
AseI	ATTAAT	1 cut(s)	174
AspLEI	GCGC	1 cut(s)	424
AspS9I	GGNCC	1 cut(s)	294
AsuC2I	CCSGG	1 cut(s)	739
AsuHPI	GGTGA	1 cut(s)	364
AvaII	GGWCC	1 cut(s)	294
BauI	CACGAG	2 cut(s)	704, 828
BbvI	GCAGC	2 cut(s)	121, 233
BccI	CCATC	2 cut(s)	56, 211
BceAI	ACGGC	1 cut(s)	831
BciVI	GTATCC	1 cut(s)	424
BclI	TGATCA	1 cut(s)	547
BcnI	CCSGG	1 cut(s)	739
BcoDI	GTCTC	2 cut(s)	380, 595
BfaI	CTAG	3 cut(s)	182, 285, 305
BfuAI	ACCTGC	1 cut(s)	468
BfuI	GTATCC	1 cut(s)	424
BisI	GCNGC	3 cut(s)	135, 199, 247
BlsI	GCNGC	3 cut(s)	136, 200, 248
Bme1390I	CCNGG	1 cut(s)	739
Bme18I	GGWCC	1 cut(s)	294
BmgT120I	GGNCC	1 cut(s)	294
BmrFI	CCNGG	1 cut(s)	739
BpmI	CTGGAG	1 cut(s)	480
BpuMI	CCSGG	1 cut(s)	739
Bsa29I	ATCGAT	1 cut(s)	840
BsaBI	GATNNNNATC	1 cut(s)	762
Bsc4I	CCNNNNNNNGG	2 cut(s)	217, 696
Bse3DI	GCAATG	1 cut(s)	528
Bse8I	GATNNNNATC	1 cut(s)	762
BseCI	ATCGAT	1 cut(s)	840
BseGI	GGATG	1 cut(s)	670
BseJI	GATNNNNATC	1 cut(s)	762
BseLI	CCNNNNNNNGG	2 cut(s)	217, 696
BseMI	GCAATG	1 cut(s)	528
BseMII	CTCAG	1 cut(s)	606
BseRI	GAGGAG	1 cut(s)	802
BseXI	GCAGC	2 cut(s)	121, 233
BsgI	GTGCAG	1 cut(s)	496
Bsh1236I	CGCG	1 cut(s)	424
BshFI	GGCC	3 cut(s)	7, 201, 689
BshVI	ATCGAT	1 cut(s)	840
BsiSI	CCGG	2 cut(s)	686, 739
BslFI	GGGAC	1 cut(s)	149
BslI	CCNNNNNNNGG	2 cut(s)	217, 696
BsmAI	GTCTC	2 cut(s)	380, 595
BsmFI	GGGAC	1 cut(s)	149
BsnI	GGCC	3 cut(s)	7, 201, 689
Bsp143I	GATC	5 cut(s)	301, 415, 547, 682, 763
BspACI	CCGC	3 cut(s)	41, 198, 709
BspANI	GGCC	3 cut(s)	7, 201, 689
BspCNI	CTCAG	1 cut(s)	605
BspDI	ATCGAT	1 cut(s)	840
BspFNI	CGCG	1 cut(s)	424
BspMI	ACCTGC	1 cut(s)	468
BspPI	GGATC	2 cut(s)	677, 771
BsrBI	CCGCTC	1 cut(s)	709
BsrDI	GCAATG	1 cut(s)	528
BssMI	GATC	5 cut(s)	301, 415, 547, 682, 763
BssNAI	GTATAC	1 cut(s)	470
BssSI	CACGAG	2 cut(s)	704, 828
Bst1107I	GTATAC	1 cut(s)	470
Bst2BI	CACGAG	2 cut(s)	704, 828
Bst4CI	ACNGT	5 cut(s)	21, 232, 298, 352, 474
Bst6I	CTCTTC	1 cut(s)	779
BstC8I	GCNNGC	1 cut(s)	208
BstDEI	CTNAG	2 cut(s)	592, 727
BstENI	CCTNNNNNAGG	1 cut(s)	694
BstF5I	GGATG	1 cut(s)	670
BstFNI	CGCG	1 cut(s)	424
BstHHI	GCGC	1 cut(s)	424
BstKTI	GATC	5 cut(s)	304, 418, 550, 685, 766
BstMAI	GTCTC	2 cut(s)	380, 595
BstMBI	GATC	5 cut(s)	301, 415, 547, 682, 763
BstMWI	GCNNNNNNNGC	4 cut(s)	207, 243, 285, 455
BstNSI	RCATGY	1 cut(s)	726
BstSCI	CCNGG	1 cut(s)	737
BstUI	CGCG	1 cut(s)	424
BstV1I	GCAGC	2 cut(s)	121, 233
BstX2I	RGATCY	2 cut(s)	682, 763
BstXI	CCANNNNNNTGG	1 cut(s)	541
BstYI	RGATCY	2 cut(s)	682, 763
BstZ17I	GTATAC	1 cut(s)	470
Bsu15I	ATCGAT	1 cut(s)	840
BsuI	GTATCC	1 cut(s)	424
BsuRI	GGCC	3 cut(s)	7, 201, 689
BsuTUI	ATCGAT	1 cut(s)	840
BtsCI	GGATG	1 cut(s)	670
BtsIMutI	CAGTG	2 cut(s)	479, 753
BveI	ACCTGC	1 cut(s)	468
Cac8I	GCNNGC	1 cut(s)	208
CfoI	GCGC	1 cut(s)	424
Cfr13I	GGNCC	1 cut(s)	294
ClaI	ATCGAT	1 cut(s)	840
CviAII	CATG	4 cut(s)	96, 128, 144, 723
CviJI	RGCY	8 cut(s)	7, 181, 201, 246, 458, 689, 737, 807
CviKI_1	RGCY	8 cut(s)	7, 181, 201, 246, 458, 689, 737, 807
DdeI	CTNAG	2 cut(s)	592, 727
DpnI	GATC	5 cut(s)	303, 417, 549, 684, 765
DpnII	GATC	5 cut(s)	301, 415, 547, 682, 763
Eam1104I	CTCTTC	1 cut(s)	779
EarI	CTCTTC	1 cut(s)	779
EciI	GGCGGA	1 cut(s)	56
Eco32I	GATATC	1 cut(s)	777
Eco47I	GGWCC	1 cut(s)	294
EcoNI	CCTNNNNNAGG	1 cut(s)	694
EcoRV	GATATC	1 cut(s)	777
FaeI	CATG	4 cut(s)	99, 131, 147, 726
FaqI	GGGAC	1 cut(s)	149
FatI	CATG	4 cut(s)	95, 127, 143, 722
FauI	CCCGC	1 cut(s)	702
FauNDI	CATATG	1 cut(s)	641
FbaI	TGATCA	1 cut(s)	547
FblI	GTMKAC	1 cut(s)	469
Fnu4HI	GCNGC	3 cut(s)	135, 199, 247
FokI	GGATG	1 cut(s)	677
Fsp4HI	GCNGC	3 cut(s)	135, 199, 247
FspBI	CTAG	3 cut(s)	182, 285, 305
GlaI	GCGC	1 cut(s)	423
GluI	GCNGC	3 cut(s)	135, 199, 247
GsuI	CTGGAG	1 cut(s)	480
HaeIII	GGCC	3 cut(s)	7, 201, 689
HapII	CCGG	2 cut(s)	686, 739
HhaI	GCGC	1 cut(s)	424
Hin1II	CATG	4 cut(s)	99, 131, 147, 726
Hin6I	GCGC	1 cut(s)	422
HinP1I	GCGC	1 cut(s)	422
HinfI	GANTC	5 cut(s)	56, 86, 185, 562, 653
HpaII	CCGG	2 cut(s)	686, 739
HphI	GGTGA	1 cut(s)	364
Hpy166II	GTNNAC	2 cut(s)	149, 470
Hpy188I	TCNGA	5 cut(s)	61, 228, 258, 577, 595
Hpy188III	TCNNGA	4 cut(s)	491, 508, 772, 830
Hpy8I	GTNNAC	2 cut(s)	149, 470
HpyAV	CCTTC	1 cut(s)	18
HpyCH4III	ACNGT	5 cut(s)	21, 232, 298, 352, 474
HpyCH4IV	ACGT	1 cut(s)	820
HpyCH4V	TGCA	2 cut(s)	279, 477
HpyF10VI	GCNNNNNNNGC	4 cut(s)	207, 243, 285, 455
HpyF3I	CTNAG	2 cut(s)	592, 727
HpySE526I	ACGT	1 cut(s)	820
Hsp92II	CATG	4 cut(s)	99, 131, 147, 726
HspAI	GCGC	1 cut(s)	422
Ksp22I	TGATCA	1 cut(s)	547
Kzo9I	GATC	5 cut(s)	301, 415, 547, 682, 763
LmnI	GCTCC	2 cut(s)	362, 400
LpnPI	CCDG	9 cut(s)	366, 404, 444, 463, 600, 609, 699, 703, 752
Lsp1109I	GCAGC	2 cut(s)	121, 233
MaeI	CTAG	3 cut(s)	182, 285, 305
MaeII	ACGT	1 cut(s)	820
MaeIII	GTNAC	4 cut(s)	352, 617, 626, 830
MalI	GATC	5 cut(s)	303, 417, 549, 684, 765
MbiI	CCGCTC	1 cut(s)	709
MboI	GATC	5 cut(s)	301, 415, 547, 682, 763
MboII	GAAGA	7 cut(s)	56, 62, 65, 506, 743, 758, 796
MflI	RGATCY	2 cut(s)	682, 763
MluCI	AATT	5 cut(s)	373, 404, 498, 557, 813
MlyI	GAGTC	2 cut(s)	571, 647
MnlI	CCTC	3 cut(s)	212, 754, 780
MseI	TTAA	3 cut(s)	36, 174, 812
MslI	CAYNNNNRTG	2 cut(s)	94, 721
MspA1I	CMGCKG	1 cut(s)	246
MspI	CCGG	2 cut(s)	686, 739
MspR9I	CCNGG	1 cut(s)	739
MvnI	CGCG	1 cut(s)	424
MwoI	GCNNNNNNNGC	4 cut(s)	207, 243, 285, 455
NciI	CCSGG	1 cut(s)	739
NdeI	CATATG	1 cut(s)	641
NdeII	GATC	5 cut(s)	301, 415, 547, 682, 763
NlaIII	CATG	4 cut(s)	99, 131, 147, 726
NmuCI	GTSAC	3 cut(s)	352, 626, 830
NspI	RCATGY	1 cut(s)	726
PcsI	WCGNNNNNNNCGW	1 cut(s)	826
PfeI	GAWTC	3 cut(s)	56, 86, 185
PkrI	GCNGC	3 cut(s)	136, 200, 248
PleI	GAGTC	2 cut(s)	570, 647
PpsI	GAGTC	2 cut(s)	570, 647
PshBI	ATTAAT	1 cut(s)	174
Psp1406I	AACGTT	1 cut(s)	820
PspPI	GGNCC	1 cut(s)	294
PsuI	RGATCY	2 cut(s)	682, 763
PvuII	CAGCTG	1 cut(s)	246
RseI	CAYNNNNRTG	2 cut(s)	94, 721
SaqAI	TTAA	3 cut(s)	36, 174, 812
SatI	GCNGC	3 cut(s)	135, 199, 247
Sau3AI	GATC	5 cut(s)	301, 415, 547, 682, 763
Sau96I	GGNCC	1 cut(s)	294
SchI	GAGTC	2 cut(s)	571, 647
ScrFI	CCNGG	1 cut(s)	739
SetI	ASST	7 cut(s)	183, 248, 412, 460, 482, 628, 823
SinI	GGWCC	1 cut(s)	294
SmiMI	CAYNNNNRTG	2 cut(s)	94, 721
Sse9I	AATT	5 cut(s)	373, 404, 498, 557, 813
SsiI	CCGC	3 cut(s)	41, 198, 709
SspI	AATATT	1 cut(s)	31
SspMI	CTAG	3 cut(s)	182, 285, 305
StyD4I	CCNGG	1 cut(s)	737
TaaI	ACNGT	5 cut(s)	21, 232, 298, 352, 474
TaiI	ACGT	1 cut(s)	823
TaqI	TCGA	3 cut(s)	110, 490, 840
TaqII	GACCGA	1 cut(s)	555
TasI	AATT	5 cut(s)	373, 404, 498, 557, 813
TauI	GCSGC	1 cut(s)	201
TfiI	GAWTC	3 cut(s)	56, 86, 185
Tru1I	TTAA	3 cut(s)	36, 174, 812
Tru9I	TTAA	3 cut(s)	36, 174, 812
TscAI	CASTG	2 cut(s)	479, 760
TseFI	GTSAC	3 cut(s)	352, 626, 830
TseI	GCWGC	2 cut(s)	134, 246
Tsp45I	GTSAC	3 cut(s)	352, 626, 830
TspDTI	ATGAA	1 cut(s)	63
TspGWI	ACGGA	1 cut(s)	677
TspRI	CASTG	2 cut(s)	479, 760
VpaK11BI	GGWCC	1 cut(s)	294
VspI	ATTAAT	1 cut(s)	174
XagI	CCTNNNNNAGG	1 cut(s)	694
XapI	RAATTY	1 cut(s)	498
XceI	RCATGY	1 cut(s)	726
XmiI	GTMKAC	1 cut(s)	469
XspI	CTAG	3 cut(s)	182, 285, 305

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.