Prupe.2G248000_v2.0.a1

zinc metalloprotease EGY2, chloroplastic

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
26396414 .. 26400613
4200 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G248000.1

Sequence Viewer

Length: 1560 bp
ATGAACTTATCGGCAACTTTTCACGGGAATTTCGTCCCCTTATCGCAGTGCAGCTCTTGCTGCGATCTTCGTATTCAGCCTTATTTGGCTGCTTCGATGGGTTCTTGGCGAAAACGGCACCGTCGTAGAAGCAGTTTGAAGCTCTACCACGTTGCGAGAAATTTGAGGAAGCAAGAGGTTGTTTGTAGATTGAGTGAGACGCAGACCGAACCAGATAGCAATAATGATGAGGAAAAAGAAGTAAATGAAAATGAAGGTGGAGATTCTGAGGAACCCCATCTTGATTCTCCGCCAATAGTTGTAGACCAAATAAACAATGATGCTGAAACTAAGGCTGAATTTGGTGTGCAGGATGTTGATAATAATGTAGAAGTTTCTAGTGGATCACCTCTGCCAGGTGTGAAGCCACAGCAGGGTGAATCAATCCGGATTCCAAAGGAAACACTTGATATTCTTAAGAACCAAGTTTTTGGCTTTGATACCTTTTTTGTGACAGCCCAGGATCCATATGAGGCTGGAGTACTATTTAAAGGAAACCTGCGAGGAGTGGCTGCCAAAAGTTACGAAAAGATATCAAAGAGAATGCAGGATAAGTTTGGGGATGAATATAAGCTTTTCCTTCTAGTCAATCCTGAGGATGATCAACCAGTGGCAGTTGTAGTTCCACGGAGGACATTACAGCCAGAGTCAACTGCGGTCCCAGAATGGTTTGCAGCTGGTGCTTTTGGATTGGTCACATTGTTTACTCTACTTCTTCGAAATGTTCCTGAATTGCAATCCAATTTACTGTCAGCTTATGATAATCTTGAACTGTTAAAGAATGGTCTACCTGGAGCCCTTGTAACTGCATCTGTTTTGGGGATACATGAGCTCAGCCATGTTTTAGTTGCAAAAAACACTGGAGTCATGCTTGGAGTGCCATACTTCGTCCCTAGTTGGCAGATAGGCTCTTTTGGTACAATTACAAGAATTATAAATATTGTACCCAAGCGTGAAGATCTTCTGAAAGTTGCAGCAGCAGGACCATTGGCTGGATTTTCCTTGGGTTTTGTTCTTTTGCTTTTAGGGTTCTTCTTACCACCTAGCGATGGTATCGGTGTTGTTGTCGATGCTTCTGTTTTTCACGAGTGCTTTCTTGTGGGGGGTATTGCAAAGCTTCTTCTTGGTGATGCGCTCAAGGAAGGCACTCCCATATCTCTTAACCCTCTGCTGCTATGGGCATGGGCCGGACTCGTTATCAATGCCATTAACAGCATTCCTGCAGGAGAGCTTGATGGGGGGAGAATTTCTTTTGCCATATGGGGAAGAAAGGCTGCAACTCGCATCACAGGTGCCTCAATCGCGCTGCTCGGATTATCATCACTAGTTAGTGATGTGGCATTTTATTGGGTAGCTCTGATATTCTTCTTGCAGAGGGGTCCGATTGCTCCCCTCTATGAGGAGATCACAGATCCTGACGATAAGTATGTTGGCCTTGGCCTATTAGTTTTGTTCCTGGGGTTGCTGGTATGCTTACCTTACCCCTTTCCCTTCACAGAGGAAGTCATTACAAGTTTCTAA

Protein Analysis

520

Amino Acids

56.64

Weight (kDa)

5.05

Isoelectric Point (pI)

40.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 974
Acc36I ACCTGC 1 cut(s) 546
AccB1I GGYRCC 2 cut(s) 117, 1331
AccB7I CCANNNNNTGG 1 cut(s) 1031
AccI GTMKAC 2 cut(s) 303, 826
AccII CGCG 1 cut(s) 1343
AccIII TCCGGA 1 cut(s) 426
AciI CCGC 2 cut(s) 290, 695
AclWI GGATC 4 cut(s) 391, 497, 510, 1445
AcsI RAATTY 4 cut(s) 28, 160, 338, 1284
AfaI GTAC 3 cut(s) 522, 958, 984
AfiI CCNNNNNNNGG 5 cut(s) 395, 413, 1031, 1088, 1438
AflII CTTAAG 1 cut(s) 455
AgsI TTSAA 2 cut(s) 139, 809
AhlI ACTAGT 1 cut(s) 1363
AjnI CCWGG 4 cut(s) 394, 498, 829, 1494
AluBI AGCT 9 cut(s) 54, 142, 613, 716, 794, 871, 1156, 1270, 1394
AluI AGCT 9 cut(s) 54, 142, 613, 716, 794, 871, 1156, 1270, 1394
Alw21I GWGCWC 1 cut(s) 873
Alw26I GTCTC 1 cut(s) 191
AlwI GGATC 4 cut(s) 391, 497, 510, 1445
AlwNI CAGNNNCTG 1 cut(s) 1454
Aor13HI TCCGGA 1 cut(s) 426
AoxI GGCC 3 cut(s) 1224, 1471, 1477
ApoI RAATTY 4 cut(s) 28, 160, 338, 1284
Asp700I GAANNNNTTC 1 cut(s) 999
AspLEI GCGC 2 cut(s) 1174, 1345
AspS9I GGNCC 4 cut(s) 697, 1022, 1224, 1418
AsuHPI GGTGA 3 cut(s) 378, 428, 1178
AsuII TTCGAA 1 cut(s) 757
AvaII GGWCC 3 cut(s) 697, 1022, 1418
AxyI CCTNAGG 1 cut(s) 633
BamHI GGATCC 1 cut(s) 502
BanI GGYRCC 2 cut(s) 117, 1331
BanII GRGCYC 2 cut(s) 838, 873
BauI CACGAG 1 cut(s) 1124
Bbv12I GWGCWC 1 cut(s) 873
BccI CCATC 4 cut(s) 91, 285, 1082, 1268
BceAI ACGGC 1 cut(s) 131
BciT130I CCWGG 4 cut(s) 396, 500, 831, 1496
BciVI GTATCC 1 cut(s) 855
BclI TGATCA 1 cut(s) 640
BcoDI GTCTC 1 cut(s) 191
BcuI ACTAGT 1 cut(s) 1363
BfaI CTAG 5 cut(s) 378, 623, 933, 1083, 1364
BfmI CTRYAG 1 cut(s) 1260
BfrI CTTAAG 1 cut(s) 455
BfuAI ACCTGC 1 cut(s) 546
BfuI GTATCC 1 cut(s) 855
BglII AGATCT 1 cut(s) 997
BlpI GCTNAGC 1 cut(s) 872
BmcAI AGTACT 1 cut(s) 522
Bme1390I CCNGG 4 cut(s) 396, 500, 831, 1496
Bme18I GGWCC 3 cut(s) 697, 1022, 1418
BmgT120I GGNCC 4 cut(s) 697, 1022, 1224, 1418
BmiI GGNNCC 7 cut(s) 119, 273, 504, 699, 835, 1333, 1419
BmrFI CCNGG 4 cut(s) 396, 500, 831, 1496
BmsI GCATC 5 cut(s) 310, 857, 1099, 1159, 1332
BpmI CTGGAG 3 cut(s) 537, 852, 921
Bpu1102I GCTNAGC 1 cut(s) 872
Bpu14I TTCGAA 1 cut(s) 757
BpuEI CTTGAG 1 cut(s) 1160
BsaBI GATNNNNATC 1 cut(s) 1357
BsaJI CCNNGG 5 cut(s) 498, 665, 1041, 1474, 1495
BsaWI WCCGGW 1 cut(s) 426
BsaXI ACNNNNNCTCC 2 cut(s) 825, 855
Bsc4I CCNNNNNNNGG 5 cut(s) 395, 413, 1031, 1088, 1438
Bse1I ACTGG 2 cut(s) 647, 904
Bse21I CCTNAGG 1 cut(s) 633
Bse8I GATNNNNATC 1 cut(s) 1357
BseAI TCCGGA 1 cut(s) 426
BseBI CCWGG 4 cut(s) 396, 500, 831, 1496
BseDI CCNNGG 5 cut(s) 498, 665, 1041, 1474, 1495
BseGI GGATG 3 cut(s) 358, 607, 643
BseJI GATNNNNATC 1 cut(s) 1357
BseLI CCNNNNNNNGG 5 cut(s) 395, 413, 1031, 1088, 1438
BseMII CTCAG 3 cut(s) 258, 624, 886
BseNI ACTGG 2 cut(s) 647, 904
BseRI GAGGAG 2 cut(s) 558, 1454
BsgI GTGCAG 2 cut(s) 70, 368
Bsh1236I CGCG 1 cut(s) 1343
BshFI GGCC 3 cut(s) 1226, 1473, 1479
BshNI GGYRCC 2 cut(s) 117, 1331
BsiHKAI GWGCWC 1 cut(s) 873
BsiSI CCGG 2 cut(s) 427, 1227
BslFI GGGAC 3 cut(s) 20, 683, 914
BslI CCNNNNNNNGG 5 cut(s) 395, 413, 1031, 1088, 1438
BsmAI GTCTC 1 cut(s) 191
BsmBI CGTCTC 1 cut(s) 191
BsmFI GGGAC 3 cut(s) 20, 683, 914
BsmI GAATGC 2 cut(s) 588, 1254
BsnI GGCC 3 cut(s) 1226, 1473, 1479
Bsp119I TTCGAA 1 cut(s) 757
Bsp1286I GDGCHC 2 cut(s) 838, 873
Bsp13I TCCGGA 1 cut(s) 426
Bsp143I GATC 7 cut(s) 64, 383, 502, 640, 997, 1443, 1450
Bsp1720I GCTNAGC 1 cut(s) 872
BspACI CCGC 2 cut(s) 290, 695
BspANI GGCC 3 cut(s) 1226, 1473, 1479
BspCNI CTCAG 3 cut(s) 259, 625, 885
BspEI TCCGGA 1 cut(s) 426
BspFNI CGCG 1 cut(s) 1343
BspLI GGNNCC 7 cut(s) 119, 273, 504, 699, 835, 1333, 1419
BspMAI CTGCAG 1 cut(s) 1264
BspMI ACCTGC 1 cut(s) 546
BspPI GGATC 4 cut(s) 391, 497, 510, 1445
BspT104I TTCGAA 1 cut(s) 757
BspT107I GGYRCC 2 cut(s) 117, 1331
BspTI CTTAAG 1 cut(s) 455
BsrI ACTGG 2 cut(s) 647, 904
BssECI CCNNGG 5 cut(s) 498, 665, 1041, 1474, 1495
BssMI GATC 7 cut(s) 64, 383, 502, 640, 997, 1443, 1450
BssSI CACGAG 1 cut(s) 1124
BssT1I CCWWGG 2 cut(s) 1041, 1474
Bst2BI CACGAG 1 cut(s) 1124
Bst2UI CCWGG 4 cut(s) 396, 500, 831, 1496
Bst4CI ACNGT 3 cut(s) 122, 789, 813
BstAFI CTTAAG 1 cut(s) 455
BstAPI GCANNNNNTGC 2 cut(s) 57, 719
BstBI TTCGAA 1 cut(s) 757
BstDEI CTNAG 4 cut(s) 267, 330, 633, 872
BstDSI CCRYGG 1 cut(s) 665
BstENI CCTNNNNNAGG 2 cut(s) 393, 1436
BstF5I GGATG 3 cut(s) 358, 607, 643
BstFNI CGCG 1 cut(s) 1343
BstHHI GCGC 2 cut(s) 1174, 1345
BstKTI GATC 7 cut(s) 67, 386, 505, 643, 1000, 1446, 1453
BstMAI GTCTC 1 cut(s) 191
BstMBI GATC 7 cut(s) 64, 383, 502, 640, 997, 1443, 1450
BstMWI GCNNNNNNNGC 6 cut(s) 57, 60, 115, 719, 916, 1340
BstNI CCWGG 4 cut(s) 396, 500, 831, 1496
BstSCI CCNGG 4 cut(s) 394, 498, 829, 1494
BstSFI CTRYAG 1 cut(s) 1260
BstUI CGCG 1 cut(s) 1343
BstX2I RGATCY 3 cut(s) 502, 997, 1450
BstXI CCANNNNNNTGG 1 cut(s) 470
BstYI RGATCY 3 cut(s) 502, 997, 1450
Bsu36I CCTNAGG 1 cut(s) 633
BsuI GTATCC 1 cut(s) 855
BsuRI GGCC 3 cut(s) 1226, 1473, 1479
BtgI CCRYGG 1 cut(s) 665
BtgZI GCGATG 1 cut(s) 1101
BtsCI GGATG 3 cut(s) 358, 607, 643
BtsI GCAGTG 1 cut(s) 53
BtsIMutI CAGTG 3 cut(s) 53, 654, 897
BveI ACCTGC 1 cut(s) 546
CaiI CAGNNNCTG 1 cut(s) 1454
CfoI GCGC 2 cut(s) 1174, 1345
Cfr13I GGNCC 4 cut(s) 697, 1022, 1224, 1418
CseI GACGC 1 cut(s) 208
Csp6I GTAC 3 cut(s) 521, 957, 983
CviAII CATG 4 cut(s) 866, 878, 907, 1221
CviQI GTAC 3 cut(s) 521, 957, 983
DdeI CTNAG 4 cut(s) 267, 330, 633, 872
DpnI GATC 7 cut(s) 66, 385, 504, 642, 999, 1445, 1452
DpnII GATC 7 cut(s) 64, 383, 502, 640, 997, 1443, 1450
DraI TTTAAA 1 cut(s) 529
EciI GGCGGA 1 cut(s) 279
Ecl136II GAGCTC 1 cut(s) 871
Eco130I CCWWGG 2 cut(s) 1041, 1474
Eco24I GRGCYC 2 cut(s) 838, 873
Eco32I GATATC 1 cut(s) 573
Eco47I GGWCC 3 cut(s) 697, 1022, 1418
Eco53kI GAGCTC 1 cut(s) 871
Eco81I CCTNAGG 1 cut(s) 633
EcoICRI GAGCTC 1 cut(s) 871
EcoNI CCTNNNNNAGG 2 cut(s) 393, 1436
EcoRII CCWGG 4 cut(s) 394, 498, 829, 1494
EcoRV GATATC 1 cut(s) 573
EcoT14I CCWWGG 2 cut(s) 1041, 1474
EcoT38I GRGCYC 2 cut(s) 838, 873
ErhI CCWWGG 2 cut(s) 1041, 1474
Esp3I CGTCTC 1 cut(s) 191
FaeI CATG 4 cut(s) 869, 881, 910, 1224
FaqI GGGAC 3 cut(s) 20, 683, 914
FatI CATG 4 cut(s) 865, 877, 906, 1220
FauNDI CATATG 2 cut(s) 508, 1298
FbaI TGATCA 1 cut(s) 640
FblI GTMKAC 2 cut(s) 303, 826
FokI GGATG 3 cut(s) 365, 614, 650
FriOI GRGCYC 2 cut(s) 838, 873
FspBI CTAG 5 cut(s) 378, 623, 933, 1083, 1364
GlaI GCGC 2 cut(s) 1173, 1344
GsuI CTGGAG 3 cut(s) 537, 852, 921
HaeIII GGCC 3 cut(s) 1226, 1473, 1479
HapII CCGG 2 cut(s) 427, 1227
HgaI GACGC 1 cut(s) 208
HhaI GCGC 2 cut(s) 1174, 1345
Hin1II CATG 4 cut(s) 869, 881, 910, 1224
Hin6I GCGC 2 cut(s) 1172, 1343
HinP1I GCGC 2 cut(s) 1172, 1343
HincII GTYRAC 1 cut(s) 690
HindII GTYRAC 1 cut(s) 690
HindIII AAGCTT 2 cut(s) 611, 1154
HinfI GANTC 7 cut(s) 263, 284, 419, 430, 686, 903, 1230
HpaII CCGG 2 cut(s) 427, 1227
HphI GGTGA 3 cut(s) 378, 428, 1178
Hpy166II GTNNAC 4 cut(s) 304, 690, 744, 827
Hpy188I TCNGA 5 cut(s) 268, 1005, 1352, 1398, 1422
Hpy188III TCNNGA 7 cut(s) 281, 427, 632, 767, 806, 1124, 1454
Hpy8I GTNNAC 4 cut(s) 304, 690, 744, 827
Hpy99I CGWCG 1 cut(s) 126
HpyAV CCTTC 4 cut(s) 248, 629, 1175, 1540
HpyCH4III ACNGT 3 cut(s) 122, 789, 813
HpyCH4IV ACGT 1 cut(s) 150
HpyF10VI GCNNNNNNNGC 6 cut(s) 57, 60, 115, 719, 916, 1340
HpyF3I CTNAG 4 cut(s) 267, 330, 633, 872
HpySE526I ACGT 1 cut(s) 150
Hsp92II CATG 4 cut(s) 869, 881, 910, 1224
HspAI GCGC 2 cut(s) 1172, 1343
Kpn2I TCCGGA 1 cut(s) 426
Ksp22I TGATCA 1 cut(s) 640
Kzo9I GATC 7 cut(s) 64, 383, 502, 640, 997, 1443, 1450
LmnI GCTCC 2 cut(s) 833, 1432
LweI GCATC 5 cut(s) 310, 857, 1099, 1159, 1332
MaeI CTAG 5 cut(s) 378, 623, 933, 1083, 1364
MaeII ACGT 1 cut(s) 150
MaeIII GTNAC 4 cut(s) 490, 560, 733, 841
MalI GATC 7 cut(s) 66, 385, 504, 642, 999, 1445, 1452
MboI GATC 7 cut(s) 64, 383, 502, 640, 997, 1443, 1450
MboII GAAGA 8 cut(s) 59, 746, 992, 1007, 1063, 1151, 1317, 1396
MflI RGATCY 3 cut(s) 502, 997, 1450
MhlI GDGCHC 2 cut(s) 838, 873
MluCI AATT 8 cut(s) 28, 160, 338, 770, 781, 960, 969, 1284
MlyI GAGTC 3 cut(s) 695, 912, 1224
MroI TCCGGA 1 cut(s) 426
MroXI GAANNNNTTC 1 cut(s) 999
MseI TTAA 5 cut(s) 456, 528, 815, 1200, 1248
MspA1I CMGCKG 1 cut(s) 716
MspCI CTTAAG 1 cut(s) 455
MspI CCGG 2 cut(s) 427, 1227
MspR9I CCNGG 4 cut(s) 396, 500, 831, 1496
Mva1269I GAATGC 2 cut(s) 588, 1254
MvaI CCWGG 4 cut(s) 396, 500, 831, 1496
MvnI CGCG 1 cut(s) 1343
MwoI GCNNNNNNNGC 6 cut(s) 57, 60, 115, 719, 916, 1340
NdeI CATATG 2 cut(s) 508, 1298
NdeII GATC 7 cut(s) 64, 383, 502, 640, 997, 1443, 1450
NlaIII CATG 4 cut(s) 869, 881, 910, 1224
NlaIV GGNNCC 7 cut(s) 119, 273, 504, 699, 835, 1333, 1419
NmuCI GTSAC 2 cut(s) 490, 733
NspV TTCGAA 1 cut(s) 757
PcsI WCGNNNNNNNCGW 2 cut(s) 30, 121
PctI GAATGC 2 cut(s) 588, 1254
PdmI GAANNNNTTC 1 cut(s) 999
PfeI GAWTC 4 cut(s) 263, 284, 419, 430
PflMI CCANNNNNTGG 1 cut(s) 1031
PleI GAGTC 3 cut(s) 694, 911, 1224
PpsI GAGTC 3 cut(s) 694, 911, 1224
PsiI TTATAA 1 cut(s) 974
Psp124BI GAGCTC 1 cut(s) 873
Psp6I CCWGG 4 cut(s) 394, 498, 829, 1494
PspGI CCWGG 4 cut(s) 394, 498, 829, 1494
PspN4I GGNNCC 7 cut(s) 119, 273, 504, 699, 835, 1333, 1419
PspPI GGNCC 4 cut(s) 697, 1022, 1224, 1418
PstI CTGCAG 1 cut(s) 1264
PstNI CAGNNNCTG 1 cut(s) 1454
PsuI RGATCY 3 cut(s) 502, 997, 1450
PvuII CAGCTG 1 cut(s) 716
RsaI GTAC 3 cut(s) 522, 958, 984
RsaNI GTAC 3 cut(s) 521, 957, 983
SacI GAGCTC 1 cut(s) 873
SaqAI TTAA 5 cut(s) 456, 528, 815, 1200, 1248
Sau3AI GATC 7 cut(s) 64, 383, 502, 640, 997, 1443, 1450
Sau96I GGNCC 4 cut(s) 697, 1022, 1224, 1418
SbfI CCTGCAGG 1 cut(s) 1264
ScaI AGTACT 1 cut(s) 522
SchI GAGTC 3 cut(s) 695, 912, 1224
ScrFI CCNGG 4 cut(s) 396, 500, 831, 1496
SdaI CCTGCAGG 1 cut(s) 1264
SduI GDGCHC 2 cut(s) 838, 873
SfaNI GCATC 5 cut(s) 310, 857, 1099, 1159, 1332
SfcI CTRYAG 1 cut(s) 1260
SfuI TTCGAA 1 cut(s) 757
SinI GGWCC 3 cut(s) 697, 1022, 1418
SmlI CTYRAG 2 cut(s) 455, 1175
SmoI CTYRAG 2 cut(s) 455, 1175
SpeI ACTAGT 1 cut(s) 1363
Sse8387I CCTGCAGG 1 cut(s) 1264
Sse9I AATT 8 cut(s) 28, 160, 338, 770, 781, 960, 969, 1284
SsiI CCGC 2 cut(s) 290, 695
SspI AATATT 1 cut(s) 979
SspMI CTAG 5 cut(s) 378, 623, 933, 1083, 1364
SstI GAGCTC 1 cut(s) 873
StyD4I CCNGG 4 cut(s) 394, 498, 829, 1494
StyI CCWWGG 2 cut(s) 1041, 1474
TaaI ACNGT 3 cut(s) 122, 789, 813
TaiI ACGT 1 cut(s) 153
TaqI TCGA 3 cut(s) 95, 757, 1107
TaqII GACCGA 1 cut(s) 221
TasI AATT 8 cut(s) 28, 160, 338, 770, 781, 960, 969, 1284
TatI WGTACW 1 cut(s) 520
TfiI GAWTC 4 cut(s) 263, 284, 419, 430
Tru1I TTAA 5 cut(s) 456, 528, 815, 1200, 1248
Tru9I TTAA 5 cut(s) 456, 528, 815, 1200, 1248
TscAI CASTG 3 cut(s) 53, 654, 904
TseFI GTSAC 2 cut(s) 490, 733
Tsp45I GTSAC 2 cut(s) 490, 733
TspDTI ATGAA 4 cut(s) 17, 261, 267, 618
TspGWI ACGGA 1 cut(s) 682
TspRI CASTG 3 cut(s) 53, 654, 904
Van91I CCANNNNNTGG 1 cut(s) 1031
Vha464I CTTAAG 1 cut(s) 455
VpaK11BI GGWCC 3 cut(s) 697, 1022, 1418
XagI CCTNNNNNAGG 2 cut(s) 393, 1436
XapI RAATTY 4 cut(s) 28, 160, 338, 1284
XmiI GTMKAC 2 cut(s) 303, 826
XmnI GAANNNNTTC 1 cut(s) 999
XspI CTAG 5 cut(s) 378, 623, 933, 1083, 1364
ZrmI AGTACT 1 cut(s) 522
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.