Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0007014

Physical Location & Seq

Genomic Coordinates Reverse (-)

26914420 .. 26915637

Gene Structure 1218 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G257700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 639 bp

ATGGCCAGCCCACCGACACTCCCGATCTCCAACAACCAATCGACCGTCGGCGCCCAGTCACAGCCTCCGATCGCCACGCCCGCCTTCCGCGCGTTCCTCTCACGCTTCTCCTCGTCGATCCGCTACGGCTTCTCGCAGCGCCGGCCCTGGTACGAGCTCCTAGACCGGAGCTCCTTGGCCCGACCCGACTCCCTCTCCGACGCCTACTCTCGGATCCGCAAGAATTTCACCTACTTCCGCGTCAACTACGTGTCCCTGCTCGCCCTCGTACTCGCCCTCTCTCTCCTCACCCACCCCTTCTCTCTCCTCGTCCTACTCTCGCTCCTCGGCGCGTGGGCCTTCCTCTACCTATTTAGACCCTCCGATCAGCCCCTGGTCATCGTAGGCCGCACTTTCTCTGACGCCGAAACACTTGTCGGCCTCGTCGTGTTGACTGTGGTCGTGGTCTTCGTCTCCAGCGTCGGCTCGCTCCTCATCTCAGCTTTGTTGATCGGCTTCGCCATTGTTTGTGCGCACGGTGCGTTTAGGGTTCCAGAGGACCTATTCCTTGACGACCAGGAGCCGGCCAACGCTGGCTTCCTCTCATTCCTCGGCGGCGCCACCTCAACCGCTGCCGCCTCCGTCGCAGCACGTGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005783 GO:0005794 GO:0005802 GO:0006810 GO:0008150 GO:0012505 GO:0016192 GO:0031410 GO:0031982 GO:0031984 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PRA1

Protein Analysis

213

Amino Acids

22.9

Weight (kDa)

9.35

Isoelectric Point (pI)

37.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007014)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G40380 AT3G56110 AT3G56110 AT3G56110 AT3G56110 AT5G05380 AT5G05380 AT5G05380 AT5G05380
fragaria_vesca	FvH4_7g25360
malus_domestica	MD01G1159700.v1.1 MD07G1228200.v1.1
prunus_persica	Prupe.2G257700_v2.0.a1
pyrus_communis	pycom01g17610 pycom07g20660
rosa_chinensis	RchiOBHm_Chr1g0371281
rosa_laevigata	RLG00000026974
rosa_multiflora	Rmu_co8217190.1_g000001
rosa_roxburghii	Rroxscaffold_4G00285820
rosa_rugosa	Rorug01G0362600
rosa_samantha	Rh1AG372700 Rh1BG336200 Rh1CG349600 Rh1DG367300
rosa_wichuraiana	Rw1G032780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	513
AccB1I	GGYRCC	2 cut(s)	50, 596
AccII	CGCG	4 cut(s)	90, 92, 240, 332
AciI	CCGC	9 cut(s)	81, 88, 121, 217, 238, 388, 594, 609, 615
AclWI	GGATC	3 cut(s)	112, 208, 221
AcoI	YGGCCR	2 cut(s)	3, 564
AcsI	RAATTY	1 cut(s)	223
AcvI	CACGTG	1 cut(s)	632
AcyI	GRCGYC	4 cut(s)	51, 201, 402, 597
AfaI	GTAC	2 cut(s)	152, 270
AfiI	CCNNNNNNNGG	2 cut(s)	210, 562
AflIII	ACRYGT	2 cut(s)	249, 631
AjnI	CCWGG	3 cut(s)	146, 372, 555
AjuI	GAANNNNNNNTTGG	2 cut(s)	560, 592
AluBI	AGCT	3 cut(s)	157, 171, 482
AluI	AGCT	3 cut(s)	157, 171, 482
Alw21I	GWGCWC	2 cut(s)	159, 173
Alw26I	GTCTC	1 cut(s)	457
AlwI	GGATC	3 cut(s)	112, 208, 221
AlwNI	CAGNNNCTG	1 cut(s)	373
AoxI	GGCC	7 cut(s)	3, 143, 177, 336, 385, 418, 564
ApeKI	GCWGC	3 cut(s)	136, 611, 626
ApoI	RAATTY	1 cut(s)	223
ArsI	GACNNNNNNTTYG	2 cut(s)	399, 431
AspLEI	GCGC	6 cut(s)	53, 92, 141, 332, 514, 599
AspS9I	GGNCC	4 cut(s)	144, 178, 336, 538
AsuHPI	GGTGA	2 cut(s)	220, 280
AvaII	GGWCC	1 cut(s)	538
BalI	TGGCCA	1 cut(s)	5
BamHI	GGATCC	1 cut(s)	213
BanI	GGYRCC	2 cut(s)	50, 596
BanII	GRGCYC	2 cut(s)	159, 173
BbrPI	CACGTG	1 cut(s)	632
BbsI	GAAGAC	1 cut(s)	439
Bbv12I	GWGCWC	2 cut(s)	159, 173
BbvI	GCAGC	2 cut(s)	148, 598
BceAI	ACGGC	1 cut(s)	142
BciT130I	CCWGG	3 cut(s)	148, 374, 557
BcoDI	GTCTC	1 cut(s)	457
BfaI	CTAG	1 cut(s)	161
BfoI	RGCGCY	3 cut(s)	54, 142, 600
BisI	GCNGC	6 cut(s)	137, 388, 595, 612, 615, 627
BlsI	GCNGC	6 cut(s)	138, 389, 596, 613, 616, 628
Bme1390I	CCNGG	3 cut(s)	148, 374, 557
Bme18I	GGWCC	1 cut(s)	538
BmgT120I	GGNCC	4 cut(s)	144, 178, 336, 538
BmiI	GGNNCC	5 cut(s)	52, 215, 531, 561, 598
BmrFI	CCNGG	3 cut(s)	148, 374, 557
BmrI	ACTGGG	1 cut(s)	49
BmuI	ACTGGG	1 cut(s)	49
BoxI	GACNNNNGTC	1 cut(s)	437
BpiI	GAAGAC	1 cut(s)	439
BpmI	CTGGAG	1 cut(s)	439
BsaAI	YACGTR	2 cut(s)	250, 632
BsaHI	GRCGYC	4 cut(s)	51, 201, 402, 597
BsaJI	CCNNGG	5 cut(s)	146, 174, 325, 372, 589
BsaWI	WCCGGW	1 cut(s)	165
BsaXI	ACNNNNNCTCC	7 cut(s)	33, 155, 179, 185, 209, 306, 336
Bsc4I	CCNNNNNNNGG	2 cut(s)	210, 562
Bse118I	RCCGGY	2 cut(s)	141, 562
Bse1I	ACTGG	1 cut(s)	55
BseBI	CCWGG	3 cut(s)	148, 374, 557
BseDI	CCNNGG	5 cut(s)	146, 174, 325, 372, 589
BseLI	CCNNNNNNNGG	2 cut(s)	210, 562
BseMII	CTCAG	1 cut(s)	492
BseNI	ACTGG	1 cut(s)	55
BseRI	GAGGAG	5 cut(s)	100, 275, 296, 314, 461
BseXI	GCAGC	2 cut(s)	148, 598
Bsh1236I	CGCG	4 cut(s)	90, 92, 240, 332
Bsh1285I	CGRYCG	2 cut(s)	45, 72
BshFI	GGCC	7 cut(s)	5, 145, 179, 338, 387, 420, 566
BshNI	GGYRCC	2 cut(s)	50, 596
BsiEI	CGRYCG	2 cut(s)	45, 72
BsiHKAI	GWGCWC	2 cut(s)	159, 173
BsiSI	CCGG	3 cut(s)	142, 166, 563
BslFI	GGGAC	1 cut(s)	238
BslI	CCNNNNNNNGG	2 cut(s)	210, 562
BsmAI	GTCTC	1 cut(s)	457
BsmBI	CGTCTC	1 cut(s)	457
BsmFI	GGGAC	1 cut(s)	238
BsnI	GGCC	7 cut(s)	5, 145, 179, 338, 387, 420, 566
Bsp1286I	GDGCHC	2 cut(s)	159, 173
Bsp143I	GATC	6 cut(s)	24, 69, 117, 213, 364, 489
BspACI	CCGC	9 cut(s)	81, 88, 121, 217, 238, 388, 594, 609, 615
BspANI	GGCC	7 cut(s)	5, 145, 179, 338, 387, 420, 566
BspCNI	CTCAG	1 cut(s)	491
BspFNI	CGCG	4 cut(s)	90, 92, 240, 332
BspLI	GGNNCC	5 cut(s)	52, 215, 531, 561, 598
BspPI	GGATC	3 cut(s)	112, 208, 221
BspT107I	GGYRCC	2 cut(s)	50, 596
BsrFI	RCCGGY	2 cut(s)	141, 562
BsrI	ACTGG	1 cut(s)	55
BssAI	RCCGGY	2 cut(s)	141, 562
BssECI	CCNNGG	5 cut(s)	146, 174, 325, 372, 589
BssMI	GATC	6 cut(s)	24, 69, 117, 213, 364, 489
BssNI	GRCGYC	4 cut(s)	51, 201, 402, 597
BssT1I	CCWWGG	1 cut(s)	174
Bst2UI	CCWGG	3 cut(s)	148, 374, 557
Bst4CI	ACNGT	3 cut(s)	46, 436, 518
BstACI	GRCGYC	4 cut(s)	51, 201, 402, 597
BstBAI	YACGTR	2 cut(s)	250, 632
BstC8I	GCNNGC	7 cut(s)	7, 81, 143, 261, 467, 564, 574
BstDEI	CTNAG	1 cut(s)	478
BstFNI	CGCG	4 cut(s)	90, 92, 240, 332
BstH2I	RGCGCY	3 cut(s)	54, 142, 600
BstHHI	GCGC	6 cut(s)	53, 92, 141, 332, 514, 599
BstKTI	GATC	6 cut(s)	27, 72, 120, 216, 367, 492
BstMAI	GTCTC	1 cut(s)	457
BstMBI	GATC	6 cut(s)	24, 69, 117, 213, 364, 489
BstMCI	CGRYCG	2 cut(s)	45, 72
BstMWI	GCNNNNNNNGC	5 cut(s)	80, 89, 142, 518, 623
BstNI	CCWGG	3 cut(s)	148, 374, 557
BstPAI	GACNNNNGTC	1 cut(s)	437
BstSCI	CCNGG	3 cut(s)	146, 372, 555
BstUI	CGCG	4 cut(s)	90, 92, 240, 332
BstV1I	GCAGC	2 cut(s)	148, 598
BstV2I	GAAGAC	1 cut(s)	439
BstX2I	RGATCY	1 cut(s)	213
BstYI	RGATCY	1 cut(s)	213
BsuRI	GGCC	7 cut(s)	5, 145, 179, 338, 387, 420, 566
Cac8I	GCNNGC	7 cut(s)	7, 81, 143, 261, 467, 564, 574
CaiI	CAGNNNCTG	1 cut(s)	373
CfoI	GCGC	6 cut(s)	53, 92, 141, 332, 514, 599
Cfr10I	RCCGGY	2 cut(s)	141, 562
Cfr13I	GGNCC	4 cut(s)	144, 178, 336, 538
CseI	GACGC	4 cut(s)	209, 229, 410, 448
Csp6I	GTAC	2 cut(s)	151, 269
CviQI	GTAC	2 cut(s)	151, 269
DdeI	CTNAG	1 cut(s)	478
DinI	GGCGCC	2 cut(s)	52, 598
DpnI	GATC	6 cut(s)	26, 71, 119, 215, 366, 491
DpnII	GATC	6 cut(s)	24, 69, 117, 213, 364, 489
EaeI	YGGCCR	2 cut(s)	3, 564
Ecl136II	GAGCTC	2 cut(s)	157, 171
Eco130I	CCWWGG	1 cut(s)	174
Eco24I	GRGCYC	2 cut(s)	159, 173
Eco47I	GGWCC	1 cut(s)	538
Eco53kI	GAGCTC	2 cut(s)	157, 171
Eco72I	CACGTG	1 cut(s)	632
EcoICRI	GAGCTC	2 cut(s)	157, 171
EcoO109I	RGGNCCY	1 cut(s)	538
EcoRII	CCWGG	3 cut(s)	146, 372, 555
EcoT14I	CCWWGG	1 cut(s)	174
EcoT38I	GRGCYC	2 cut(s)	159, 173
EgeI	GGCGCC	2 cut(s)	52, 598
EheI	GGCGCC	2 cut(s)	52, 598
ErhI	CCWWGG	1 cut(s)	174
Esp3I	CGTCTC	1 cut(s)	457
FaqI	GGGAC	1 cut(s)	238
FauI	CCCGC	1 cut(s)	88
Fnu4HI	GCNGC	6 cut(s)	137, 388, 595, 612, 615, 627
FriOI	GRGCYC	2 cut(s)	159, 173
Fsp4HI	GCNGC	6 cut(s)	137, 388, 595, 612, 615, 627
FspAI	RTGCGCAY	1 cut(s)	513
FspBI	CTAG	1 cut(s)	161
FspI	TGCGCA	1 cut(s)	513
GlaI	GCGC	6 cut(s)	52, 91, 140, 331, 513, 598
GluI	GCNGC	6 cut(s)	137, 388, 595, 612, 615, 627
GsuI	CTGGAG	1 cut(s)	439
HaeII	RGCGCY	3 cut(s)	54, 142, 600
HaeIII	GGCC	7 cut(s)	5, 145, 179, 338, 387, 420, 566
HapII	CCGG	3 cut(s)	142, 166, 563
HgaI	GACGC	4 cut(s)	209, 229, 410, 448
HhaI	GCGC	6 cut(s)	53, 92, 141, 332, 514, 599
Hin1I	GRCGYC	4 cut(s)	51, 201, 402, 597
Hin6I	GCGC	6 cut(s)	51, 90, 139, 330, 512, 597
HinP1I	GCGC	6 cut(s)	51, 90, 139, 330, 512, 597
HincII	GTYRAC	2 cut(s)	244, 432
HindII	GTYRAC	2 cut(s)	244, 432
HinfI	GANTC	1 cut(s)	188
HpaII	CCGG	3 cut(s)	142, 166, 563
HphI	GGTGA	2 cut(s)	220, 280
Hpy166II	GTNNAC	2 cut(s)	244, 432
Hpy188I	TCNGA	5 cut(s)	69, 199, 213, 364, 400
Hpy188III	TCNNGA	2 cut(s)	22, 533
Hpy8I	GTNNAC	2 cut(s)	244, 432
Hpy99I	CGWCG	6 cut(s)	50, 118, 203, 428, 464, 626
HpyAV	CCTTC	3 cut(s)	94, 307, 349
HpyCH4III	ACNGT	3 cut(s)	46, 436, 518
HpyCH4IV	ACGT	2 cut(s)	249, 631
HpyF10VI	GCNNNNNNNGC	5 cut(s)	80, 89, 142, 518, 623
HpyF3I	CTNAG	1 cut(s)	478
HpySE526I	ACGT	2 cut(s)	249, 631
Hsp92I	GRCGYC	4 cut(s)	51, 201, 402, 597
HspAI	GCGC	6 cut(s)	51, 90, 139, 330, 512, 597
KasI	GGCGCC	2 cut(s)	50, 596
KroI	GCCGGC	2 cut(s)	141, 562
KroNI	GCCGGC	2 cut(s)	143, 564
Kzo9I	GATC	6 cut(s)	24, 69, 117, 213, 364, 489
LmnI	GCTCC	6 cut(s)	162, 168, 176, 327, 474, 559
Lsp1109I	GCAGC	2 cut(s)	148, 598
MaeI	CTAG	1 cut(s)	161
MaeII	ACGT	2 cut(s)	249, 631
MaeIII	GTNAC	1 cut(s)	57
MalI	GATC	6 cut(s)	26, 71, 119, 215, 366, 491
MboI	GATC	6 cut(s)	24, 69, 117, 213, 364, 489
MboII	GAAGA	1 cut(s)	439
MflI	RGATCY	1 cut(s)	213
MhlI	GDGCHC	2 cut(s)	159, 173
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	1 cut(s)	223
MluNI	TGGCCA	1 cut(s)	5
Mly113I	GGCGCC	2 cut(s)	51, 597
MlyI	GAGTC	1 cut(s)	182
MmeI	TCCRAC	2 cut(s)	54, 222
Mox20I	TGGCCA	1 cut(s)	5
MroNI	GCCGGC	2 cut(s)	141, 562
MscI	TGGCCA	1 cut(s)	5
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	1 cut(s)	611
MspI	CCGG	3 cut(s)	142, 166, 563
MspR9I	CCNGG	3 cut(s)	148, 374, 557
MvaI	CCWGG	3 cut(s)	148, 374, 557
MvnI	CGCG	4 cut(s)	90, 92, 240, 332
MwoI	GCNNNNNNNGC	5 cut(s)	80, 89, 142, 518, 623
NaeI	GCCGGC	2 cut(s)	143, 564
NarI	GGCGCC	2 cut(s)	51, 597
NdeII	GATC	6 cut(s)	24, 69, 117, 213, 364, 489
NgoMIV	GCCGGC	2 cut(s)	141, 562
NlaIV	GGNNCC	5 cut(s)	52, 215, 531, 561, 598
NmeAIII	GCCGAG	2 cut(s)	306, 570
NmuCI	GTSAC	1 cut(s)	57
NsbI	TGCGCA	1 cut(s)	513
PcsI	WCGNNNNNNNCGW	3 cut(s)	423, 447, 456
PdiI	GCCGGC	2 cut(s)	143, 564
PkrI	GCNGC	6 cut(s)	138, 389, 596, 613, 616, 628
Ple19I	CGATCG	1 cut(s)	72
PleI	GAGTC	1 cut(s)	182
PluTI	GGCGCC	2 cut(s)	54, 600
PmaCI	CACGTG	1 cut(s)	632
PmlI	CACGTG	1 cut(s)	632
PpsI	GAGTC	1 cut(s)	182
Ppu21I	YACGTR	2 cut(s)	250, 632
PpuMI	RGGWCCY	1 cut(s)	538
PshAI	GACNNNNGTC	1 cut(s)	437
Psp124BI	GAGCTC	2 cut(s)	159, 173
Psp5II	RGGWCCY	1 cut(s)	538
Psp6I	CCWGG	3 cut(s)	146, 372, 555
PspCI	CACGTG	1 cut(s)	632
PspGI	CCWGG	3 cut(s)	146, 372, 555
PspN4I	GGNNCC	5 cut(s)	52, 215, 531, 561, 598
PspPI	GGNCC	4 cut(s)	144, 178, 336, 538
PspPPI	RGGWCCY	1 cut(s)	538
PstNI	CAGNNNCTG	1 cut(s)	373
PsuI	RGATCY	1 cut(s)	213
PvuI	CGATCG	1 cut(s)	72
RsaI	GTAC	2 cut(s)	152, 270
RsaNI	GTAC	2 cut(s)	151, 269
SacI	GAGCTC	2 cut(s)	159, 173
SatI	GCNGC	6 cut(s)	137, 388, 595, 612, 615, 627
Sau3AI	GATC	6 cut(s)	24, 69, 117, 213, 364, 489
Sau96I	GGNCC	4 cut(s)	144, 178, 336, 538
SchI	GAGTC	1 cut(s)	182
ScrFI	CCNGG	3 cut(s)	148, 374, 557
SduI	GDGCHC	2 cut(s)	159, 173
SetI	ASST	9 cut(s)	159, 173, 233, 252, 351, 484, 543, 605, 634
SfoI	GGCGCC	2 cut(s)	52, 598
SinI	GGWCC	1 cut(s)	538
Sse9I	AATT	1 cut(s)	223
SsiI	CCGC	9 cut(s)	81, 88, 121, 217, 238, 388, 594, 609, 615
SspDI	GGCGCC	2 cut(s)	50, 596
SspMI	CTAG	1 cut(s)	161
SstI	GAGCTC	2 cut(s)	159, 173
StyD4I	CCNGG	3 cut(s)	146, 372, 555
StyI	CCWWGG	1 cut(s)	174
TaaI	ACNGT	3 cut(s)	46, 436, 518
TaiI	ACGT	2 cut(s)	252, 634
TaqI	TCGA	2 cut(s)	41, 116
TasI	AATT	1 cut(s)	223
TauI	GCSGC	3 cut(s)	390, 597, 617
TseFI	GTSAC	1 cut(s)	57
TseI	GCWGC	3 cut(s)	136, 611, 626
Tsp45I	GTSAC	1 cut(s)	57
TspGWI	ACGGA	1 cut(s)	610
VpaK11BI	GGWCC	1 cut(s)	538
XapI	RAATTY	1 cut(s)	223
XspI	CTAG	1 cut(s)	161

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.