Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0010912

Physical Location & Seq

Genomic Coordinates Forward (+)

27847572 .. 27850920

Gene Structure 3349 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G277700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1197 bp

ATGAGCTGGCTCAGGAGGATCGAGCTCGTCGAGCCCTACTACAGCCCTCCCCTTCTTCTCCGAGAAACAACCTCCATTTTCGCTCCCAAAGCTCTACCTTTCCCTTCATTTTTCGAAGATGTTGAGGAGGATTACGAGCTCGGCTACGCTCTGGACTTCTTCAGTCCTCCCAGCCCCATCAAAACGCCGTCGCTTCTGTCGTACAAGCTGATTCAGCGAGTTGAGAGGCTCGGAAGTGAGATCTTGTTGCAGAGCCTGAGCGACCGAGTCAGTGAGCTGGAGTCGCGGTTTGATCGGCTGGCCAAGGTCAAATCGGGTGGGGATCGGAAATACACGTGGACGGCGGAGATCAAGGGCCCCGAGAAGCACGGCCTTGAACGGAAATACAAATGGACGACGGAGATCAAAGAGGGAAAGCATAAGAAAAAGGCGGAGAAGGAAGAGGCGACTGACAAGAAGTACAGATGGACGGCTGAGATTGAAGGGAAGGGAGAGATCTCGCGCAAGTACACGTTCACAGCATCGAATGGTGATGATGCAAGTAACAGCAGCGAAACGAAGGAGAAGGAGGAGAAGAAAAAGAAGAAGGATAAGAAGGAAAAGAAGGAAGGGAGGGACACGCGTTTGGTGGAGATTGAAGAGCTTGTTGATCATGGGGCTGTCGTTCTAAGACAGGCTTTTGCAAAGAGAGCTGGAGCTACTGGAAAGGCTAAGGGAAAGAGGAAGGAGCTGTCTCCTCAAGATGCAGCAATGATGATACAGATGACTTTCAGAGCTTATCTGATCCGCAGATCGCAGGCTCTCCGGGCCCTTAGAGATCTGGCAGTTGCCAAGTCCAAGTTGAAGGAGATCAGAGCATTGTTCAATAACTTCTCCTACCGCCGTCGTGTAGCTCATGACGCAGCAGAGCGTCAGAGGTTCACCGAAAGAATCATTGTTCTGCTCCTCACTGTTGATGCCATTGAGGGCGCTGATGTAATGGTGCGAACTGCAAAGAGGTCGATGGTGGATGAGCTGGAAGCAATGCTCGACGTGGTTGACCCCCAGCCTGCTGGAAAATCACTCTCCATGAGGAGGAGGACCTTTGATATGCCAGATGGGGTCATTCAGAGGGAAATTGCTGAAGGTGTGGCGCAGGTTGTCCAAATGCTGGAGCGTGAAGAGAACAGTTCTAATACCTTCGAGGCATGCTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0005911 GO:0006457 GO:0006950 GO:0006986 GO:0008150 GO:0009266 GO:0009408 GO:0009409 GO:0009506 GO:0009605 GO:0009607 GO:0009628 GO:0009987 GO:0010033 GO:0012505 GO:0016020 GO:0030054 GO:0033554 GO:0034605 GO:0034620 GO:0035966 GO:0035967 GO:0042221 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051716 GO:0055044 GO:0070417 GO:0070887 GO:0071310 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BAG

Protein Analysis

399

Amino Acids

45.69

Weight (kDa)

9.33

Isoelectric Point (pI)

55.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010912)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G62390
fragaria_vesca	FvH4_7g27600 FvH4_7g27600
prunus_persica	Prupe.2G277700_v2.0.a1
pyrus_communis	pycom01g19380 pycom01g19390 pycom07g22700
rosa_chinensis	RchiOBHm_Chr1g0374461
rosa_laevigata	RLG00000026735
rosa_multiflora	Rmu_sc0011139.1_g000005 Rmu_sc0016220.1_g000001 Rmu_sc0017667.1_g000001 Rmu_ssc0000007.1_g000007
rosa_roxburghii	Rroxscaffold_4G00283460
rosa_rugosa	Rorug01G0383300
rosa_samantha	Rh1AG394200 Rh1BG358800 Rh1CG371800 Rh1DG389400
rosa_wichuraiana	Rw1G034200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1126
AccB7I	CCANNNNNTGG	1 cut(s)	1150
AccII	CGCG	3 cut(s)	286, 502, 622
AciI	CCGC	5 cut(s)	286, 344, 431, 787, 880
AclWI	GGATC	3 cut(s)	26, 330, 778
AcoI	YGGCCR	1 cut(s)	300
AcuI	CTGAAG	2 cut(s)	145, 1143
AcvI	CACGTG	1 cut(s)	336
AfaI	GTAC	3 cut(s)	203, 461, 509
AfiI	CCNNNNNNNGG	2 cut(s)	1074, 1150
AflIII	ACRYGT	3 cut(s)	333, 510, 620
AgsI	TTSAA	5 cut(s)	377, 482, 638, 844, 865
AjiI	CACGTC	1 cut(s)	1033
Alw21I	GWGCWC	2 cut(s)	27, 141
Alw26I	GTCTC	1 cut(s)	738
AlwI	GGATC	3 cut(s)	26, 330, 778
AlwNI	CAGNNNCTG	1 cut(s)	256
Ama87I	CYCGRG	1 cut(s)	359
AoxI	GGCC	4 cut(s)	300, 355, 370, 807
ApaI	GGGCCC	2 cut(s)	359, 811
ApeKI	GCWGC	3 cut(s)	549, 746, 902
AspLEI	GCGC	3 cut(s)	504, 971, 1135
AspS9I	GGNCC	5 cut(s)	355, 356, 807, 808, 1080
AsuC2I	CCSGG	1 cut(s)	806
AsuHPI	GGTGA	2 cut(s)	542, 913
AsuII	TTCGAA	1 cut(s)	114
AvaI	CYCGRG	1 cut(s)	359
AvaII	GGWCC	1 cut(s)	1080
BaeGI	GKGCMC	2 cut(s)	359, 811
BalI	TGGCCA	1 cut(s)	302
BanII	GRGCYC	5 cut(s)	27, 36, 141, 359, 811
BbrPI	CACGTG	1 cut(s)	336
Bbv12I	GWGCWC	2 cut(s)	27, 141
BbvI	GCAGC	3 cut(s)	561, 758, 914
BccI	CCATC	4 cut(s)	185, 459, 997, 1091
BceAI	ACGGC	5 cut(s)	172, 357, 385, 486, 867
BcgI	CGANNNNNNTGC	2 cut(s)	981, 1015
BclI	TGATCA	1 cut(s)	649
BcnI	CCSGG	1 cut(s)	806
BcoDI	GTCTC	1 cut(s)	738
BfmI	CTRYAG	1 cut(s)	40
BfoI	RGCGCY	1 cut(s)	972
BfuAI	ACCTGC	1 cut(s)	1126
BglII	AGATCT	3 cut(s)	240, 495, 817
BisI	GCNGC	3 cut(s)	550, 747, 903
BlsI	GCNGC	3 cut(s)	551, 748, 904
Bme1390I	CCNGG	1 cut(s)	806
Bme18I	GGWCC	1 cut(s)	1080
BmeT110I	CYCGRG	1 cut(s)	359
BmgBI	CACGTC	1 cut(s)	1033
BmgT120I	GGNCC	5 cut(s)	355, 356, 807, 808, 1080
BmiI	GGNNCC	3 cut(s)	357, 358, 809
BmrFI	CCNGG	1 cut(s)	806
BmsI	GCATC	4 cut(s)	526, 530, 733, 946
BpmI	CTGGAG	3 cut(s)	299, 714, 1172
Bpu10I	CCTNAGC	3 cut(s)	11, 257, 711
Bpu14I	TTCGAA	1 cut(s)	114
BpuEI	CTTGAG	1 cut(s)	723
BpuMI	CCSGG	1 cut(s)	806
BsaAI	YACGTR	1 cut(s)	336
BsaJI	CCNNGG	1 cut(s)	303
BsaXI	ACNNNNNCTCC	2 cut(s)	272, 302
Bsc4I	CCNNNNNNNGG	2 cut(s)	1074, 1150
Bse1I	ACTGG	1 cut(s)	706
Bse3DI	GCAATG	2 cut(s)	756, 1029
BseDI	CCNNGG	1 cut(s)	303
BseGI	GGATG	1 cut(s)	1015
BseLI	CCNNNNNNNGG	2 cut(s)	1074, 1150
BseMI	GCAATG	2 cut(s)	756, 1029
BseMII	CTCAG	3 cut(s)	25, 248, 465
BseNI	ACTGG	1 cut(s)	706
BseRI	GAGGAG	6 cut(s)	140, 584, 726, 935, 1087, 1090
BseSI	GKGCMC	2 cut(s)	359, 811
BseXI	GCAGC	3 cut(s)	561, 758, 914
BseYI	CCCAGC	2 cut(s)	170, 1044
Bsh1236I	CGCG	3 cut(s)	286, 502, 622
Bsh1285I	CGRYCG	1 cut(s)	265
BshFI	GGCC	4 cut(s)	302, 357, 372, 809
BsiEI	CGRYCG	1 cut(s)	265
BsiHKAI	GWGCWC	2 cut(s)	27, 141
BsiHKCI	CYCGRG	1 cut(s)	359
BsiSI	CCGG	1 cut(s)	805
BslFI	GGGAC	1 cut(s)	629
BslI	CCNNNNNNNGG	2 cut(s)	1074, 1150
BsmAI	GTCTC	1 cut(s)	738
BsmFI	GGGAC	1 cut(s)	629
BsnI	GGCC	4 cut(s)	302, 357, 372, 809
BsoBI	CYCGRG	1 cut(s)	359
Bsp119I	TTCGAA	1 cut(s)	114
Bsp120I	GGGCCC	2 cut(s)	355, 807
Bsp1286I	GDGCHC	5 cut(s)	27, 36, 141, 359, 811
BspACI	CCGC	5 cut(s)	286, 344, 431, 787, 880
BspANI	GGCC	4 cut(s)	302, 357, 372, 809
BspCNI	CTCAG	3 cut(s)	24, 249, 466
BspFNI	CGCG	3 cut(s)	286, 502, 622
BspHI	TCATGA	1 cut(s)	895
BspLI	GGNNCC	3 cut(s)	357, 358, 809
BspMI	ACCTGC	1 cut(s)	1126
BspPI	GGATC	3 cut(s)	26, 330, 778
BspQI	GCTCTTC	1 cut(s)	633
BspT104I	TTCGAA	1 cut(s)	114
BsrDI	GCAATG	2 cut(s)	756, 1029
BsrI	ACTGG	1 cut(s)	706
BssECI	CCNNGG	1 cut(s)	303
BssT1I	CCWWGG	1 cut(s)	303
Bst4CI	ACNGT	2 cut(s)	952, 1169
Bst6I	CTCTTC	3 cut(s)	435, 633, 1155
BstBAI	YACGTR	1 cut(s)	336
BstBI	TTCGAA	1 cut(s)	114
BstC8I	GCNNGC	5 cut(s)	8, 300, 798, 1050, 1189
BstDEI	CTNAG	6 cut(s)	11, 257, 474, 668, 711, 812
BstF5I	GGATG	1 cut(s)	1015
BstFNI	CGCG	3 cut(s)	286, 502, 622
BstH2I	RGCGCY	1 cut(s)	972
BstHHI	GCGC	3 cut(s)	504, 971, 1135
BstMAI	GTCTC	1 cut(s)	738
BstMCI	CGRYCG	1 cut(s)	265
BstMWI	GCNNNNNNNGC	7 cut(s)	31, 89, 214, 283, 689, 806, 899
BstNSI	RCATGY	1 cut(s)	1191
BstSCI	CCNGG	1 cut(s)	804
BstSFI	CTRYAG	1 cut(s)	40
BstSLI	GKGCMC	2 cut(s)	359, 811
BstUI	CGCG	3 cut(s)	286, 502, 622
BstV1I	GCAGC	3 cut(s)	561, 758, 914
BstX2I	RGATCY	3 cut(s)	240, 495, 817
BstXI	CCANNNNNNTGG	1 cut(s)	1052
BstYI	RGATCY	3 cut(s)	240, 495, 817
BsuRI	GGCC	4 cut(s)	302, 357, 372, 809
BtrI	CACGTC	1 cut(s)	1033
BtsCI	GGATG	1 cut(s)	1015
BtsIMutI	CAGTG	2 cut(s)	277, 948
BveI	ACCTGC	1 cut(s)	1126
Cac8I	GCNNGC	5 cut(s)	8, 300, 798, 1050, 1189
CaiI	CAGNNNCTG	1 cut(s)	256
CciI	TCATGA	1 cut(s)	895
CfoI	GCGC	3 cut(s)	504, 971, 1135
Cfr13I	GGNCC	5 cut(s)	355, 356, 807, 808, 1080
CseI	GACGC	2 cut(s)	899, 908
Csp6I	GTAC	3 cut(s)	202, 460, 508
CspCI	CAANNNNNGTGG	2 cut(s)	298, 333
CviAII	CATG	4 cut(s)	653, 896, 1069, 1188
CviQI	GTAC	3 cut(s)	202, 460, 508
DdeI	CTNAG	6 cut(s)	11, 257, 474, 668, 711, 812
EaeI	YGGCCR	1 cut(s)	300
Eam1104I	CTCTTC	3 cut(s)	435, 633, 1155
EarI	CTCTTC	3 cut(s)	435, 633, 1155
EciI	GGCGGA	2 cut(s)	359, 446
Ecl136II	GAGCTC	2 cut(s)	25, 139
Eco130I	CCWWGG	1 cut(s)	303
Eco24I	GRGCYC	5 cut(s)	27, 36, 141, 359, 811
Eco47I	GGWCC	1 cut(s)	1080
Eco53kI	GAGCTC	2 cut(s)	25, 139
Eco57I	CTGAAG	2 cut(s)	145, 1143
Eco72I	CACGTG	1 cut(s)	336
Eco88I	CYCGRG	1 cut(s)	359
EcoICRI	GAGCTC	2 cut(s)	25, 139
EcoO109I	RGGNCCY	4 cut(s)	355, 356, 808, 1080
EcoT14I	CCWWGG	1 cut(s)	303
EcoT38I	GRGCYC	5 cut(s)	27, 36, 141, 359, 811
ErhI	CCWWGG	1 cut(s)	303
FaeI	CATG	4 cut(s)	656, 899, 1072, 1191
FaiI	YATR	6 cut(s)	420, 654, 897, 1070, 1091, 1189
FalI	AAGNNNNNCTT	2 cut(s)	661, 693
FaqI	GGGAC	1 cut(s)	629
FatI	CATG	4 cut(s)	652, 895, 1068, 1187
FbaI	TGATCA	1 cut(s)	649
Fnu4HI	GCNGC	3 cut(s)	550, 747, 903
FokI	GGATG	1 cut(s)	1022
FriOI	GRGCYC	5 cut(s)	27, 36, 141, 359, 811
Fsp4HI	GCNGC	3 cut(s)	550, 747, 903
GlaI	GCGC	3 cut(s)	503, 970, 1134
GluI	GCNGC	3 cut(s)	550, 747, 903
GsaI	CCCAGC	2 cut(s)	174, 1048
GsuI	CTGGAG	3 cut(s)	299, 714, 1172
HaeII	RGCGCY	1 cut(s)	972
HaeIII	GGCC	4 cut(s)	302, 357, 372, 809
HapII	CCGG	1 cut(s)	805
HgaI	GACGC	2 cut(s)	899, 908
HhaI	GCGC	3 cut(s)	504, 971, 1135
Hin1II	CATG	4 cut(s)	656, 899, 1072, 1191
Hin6I	GCGC	3 cut(s)	502, 969, 1133
HinP1I	GCGC	3 cut(s)	502, 969, 1133
HincII	GTYRAC	1 cut(s)	1039
HindII	GTYRAC	1 cut(s)	1039
HinfI	GANTC	4 cut(s)	211, 267, 281, 930
HpaII	CCGG	1 cut(s)	805
HphI	GGTGA	2 cut(s)	542, 913
Hpy166II	GTNNAC	5 cut(s)	339, 510, 516, 921, 1039
Hpy188I	TCNGA	8 cut(s)	62, 233, 327, 773, 783, 854, 915, 1110
Hpy188III	TCNNGA	4 cut(s)	13, 152, 740, 896
Hpy8I	GTNNAC	5 cut(s)	339, 510, 516, 921, 1039
Hpy99I	CGWCG	5 cut(s)	32, 193, 400, 888, 1034
HpyCH4III	ACNGT	2 cut(s)	952, 1169
HpyCH4IV	ACGT	3 cut(s)	335, 512, 1032
HpyCH4V	TGCA	5 cut(s)	250, 539, 683, 746, 992
HpyF10VI	GCNNNNNNNGC	7 cut(s)	31, 89, 214, 283, 689, 806, 899
HpyF3I	CTNAG	6 cut(s)	11, 257, 474, 668, 711, 812
HpySE526I	ACGT	3 cut(s)	335, 512, 1032
Hsp92II	CATG	4 cut(s)	656, 899, 1072, 1191
HspAI	GCGC	3 cut(s)	502, 969, 1133
Ksp22I	TGATCA	1 cut(s)	649
LguI	GCTCTTC	1 cut(s)	633
LmnI	GCTCC	5 cut(s)	88, 695, 727, 948, 1153
Lsp1109I	GCAGC	3 cut(s)	561, 758, 914
LweI	GCATC	4 cut(s)	526, 530, 733, 946
MaeII	ACGT	3 cut(s)	335, 512, 1032
MaeIII	GTNAC	1 cut(s)	542
MboII	GAAGA	8 cut(s)	47, 128, 151, 452, 586, 595, 650, 1172
MflI	RGATCY	3 cut(s)	240, 495, 817
MhlI	GDGCHC	5 cut(s)	27, 36, 141, 359, 811
MlsI	TGGCCA	1 cut(s)	302
MluCI	AATT	1 cut(s)	1116
MluI	ACGCGT	1 cut(s)	620
MluNI	TGGCCA	1 cut(s)	302
MlyI	GAGTC	2 cut(s)	276, 290
Mox20I	TGGCCA	1 cut(s)	302
MscI	TGGCCA	1 cut(s)	302
Msp20I	TGGCCA	1 cut(s)	302
MspI	CCGG	1 cut(s)	805
MspR9I	CCNGG	1 cut(s)	806
MvnI	CGCG	3 cut(s)	286, 502, 622
MwoI	GCNNNNNNNGC	7 cut(s)	31, 89, 214, 283, 689, 806, 899
NciI	CCSGG	1 cut(s)	806
NlaIII	CATG	4 cut(s)	656, 899, 1072, 1191
NlaIV	GGNNCC	3 cut(s)	357, 358, 809
NmeAIII	GCCGAG	1 cut(s)	120
NspI	RCATGY	1 cut(s)	1191
NspV	TTCGAA	1 cut(s)	114
PaeI	GCATGC	1 cut(s)	1191
PagI	TCATGA	1 cut(s)	895
PciSI	GCTCTTC	1 cut(s)	633
PcsI	WCGNNNNNNNCGW	2 cut(s)	27, 197
PfeI	GAWTC	2 cut(s)	211, 930
PflFI	GACNNNGTC	1 cut(s)	266
PflMI	CCANNNNNTGG	1 cut(s)	1150
PkrI	GCNGC	3 cut(s)	551, 748, 904
PleI	GAGTC	2 cut(s)	275, 289
PmaCI	CACGTG	1 cut(s)	336
PmlI	CACGTG	1 cut(s)	336
PpsI	GAGTC	2 cut(s)	275, 289
Ppu21I	YACGTR	1 cut(s)	336
PpuMI	RGGWCCY	1 cut(s)	1080
Psp124BI	GAGCTC	2 cut(s)	27, 141
Psp5II	RGGWCCY	1 cut(s)	1080
PspCI	CACGTG	1 cut(s)	336
PspFI	CCCAGC	2 cut(s)	170, 1044
PspN4I	GGNNCC	3 cut(s)	357, 358, 809
PspOMI	GGGCCC	2 cut(s)	355, 807
PspPI	GGNCC	5 cut(s)	355, 356, 807, 808, 1080
PspPPI	RGGWCCY	1 cut(s)	1080
PstNI	CAGNNNCTG	1 cut(s)	256
PsuI	RGATCY	3 cut(s)	240, 495, 817
PsyI	GACNNNGTC	1 cut(s)	266
RsaI	GTAC	3 cut(s)	203, 461, 509
RsaNI	GTAC	3 cut(s)	202, 460, 508
SacI	GAGCTC	2 cut(s)	27, 141
SapI	GCTCTTC	1 cut(s)	633
SatI	GCNGC	3 cut(s)	550, 747, 903
Sau96I	GGNCC	5 cut(s)	355, 356, 807, 808, 1080
SchI	GAGTC	2 cut(s)	276, 290
ScrFI	CCNGG	1 cut(s)	806
SduI	GDGCHC	5 cut(s)	27, 36, 141, 359, 811
SfaNI	GCATC	4 cut(s)	526, 530, 733, 946
SfcI	CTRYAG	1 cut(s)	40
SfuI	TTCGAA	1 cut(s)	114
SinI	GGWCC	1 cut(s)	1080
SmlI	CTYRAG	1 cut(s)	738
SmoI	CTYRAG	1 cut(s)	738
SphI	GCATGC	1 cut(s)	1191
Sse9I	AATT	1 cut(s)	1116
SsiI	CCGC	5 cut(s)	286, 344, 431, 787, 880
SstI	GAGCTC	2 cut(s)	27, 141
StyD4I	CCNGG	1 cut(s)	804
StyI	CCWWGG	1 cut(s)	303
TaaI	ACNGT	2 cut(s)	952, 1169
TaiI	ACGT	3 cut(s)	338, 515, 1035
TaqI	TCGA	7 cut(s)	21, 30, 114, 524, 1001, 1029, 1182
TaqII	GACCGA	1 cut(s)	279
TasI	AATT	1 cut(s)	1116
TatI	WGTACW	2 cut(s)	459, 507
TfiI	GAWTC	2 cut(s)	211, 930
TscAI	CASTG	2 cut(s)	277, 955
TseI	GCWGC	3 cut(s)	549, 746, 902
TspDTI	ATGAA	1 cut(s)	96
TspGWI	ACGGA	2 cut(s)	394, 413
TspRI	CASTG	2 cut(s)	277, 955
Tth111I	GACNNNGTC	1 cut(s)	266
Van91I	CCANNNNNTGG	1 cut(s)	1150
VpaK11BI	GGWCC	1 cut(s)	1080
XceI	RCATGY	1 cut(s)	1191

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.