Rmu_ssc0000007.1_g000007

BAG family molecular chaperone regulator

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000007.1
Physical Location & Seq
Reverse (-)
53530 .. 55592
2063 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000007.1_g000007.1.cds

Sequence Viewer

Length: 1167 bp
atgagctggctcaggagaatcgacctcatcgagccctactactactgcccgccgccgccggcggttctcgtccgcgagacctccattttcgccgccgcgccgaaactcccttcgtttttcgaagaggtgatggaggaggatttcgagctcggatacgcattggacctgctgtgccctagccccgtcaaaacgccgtcgcttttgtcctacaagctgattcagcgcgtggagaggctcggaggcgagctctacttgcagagcctgagcgaccgagtcactgagctggagtcgcgattcgatcgcctcgcgaagatcaaggcggccgccgccgccggccttgtcgatcggaagtacacgtacacggcggagatcaaggcgccggagaagaagtacatgtggacgacggagatcaaggaggggaagcataagaagagtgagaggaagtacaagtggacggcggaggttgaaggcaagggagagatctcgaggaagtacacgtttactgcttcgagtggcgatgcagaggatcacagtgagaagaaggagaagaagaagaagcatcataaggtgaagaaggaagagagtggctctcgtgtggtggagattgaagagcttgcagctgatcatggagctgtggttctaagacaggcttttgctaagagaactggaggtagtaaagttgctaaggggaagaacaaggaactgtctcctcaggatgcagccatgatgatacaagggaatttcagagcttatctgatccgtagatcacaggctcttcgggcccttagagacctggctgttgccaagtccaagctgaaggagctgagagcattgtttaataacttctcttaccgccgccgtgtagcccatgatacggctgagcgtcaaaggttcactgaaaaaatcattgttctgctccttactgtggatgccattgagggtgctgatttaatggtgcgatccgcaaagaggtcgatggtggatgagctggaagctatgcttgaagtggttgacccccaaccagctggaaaatcattgtccatgaggaggaggacctttgatatgccagatggtgtcattcaaagggagatcgctgaaggtgtggcacaggttgtccaaatgcttgatcgtgaagagaacagttctacctttgaggcatgtttgtga

Protein Analysis

388

Amino Acids

44.13

Weight (kDa)

9.22

Isoelectric Point (pI)

56.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 174
AccB1I GGYRCC 1 cut(s) 376
AccII CGCG 5 cut(s) 75, 98, 225, 292, 308
AclWI GGATC 3 cut(s) 534, 751, 954
AcoI YGGCCR 1 cut(s) 321
AcsI RAATTY 1 cut(s) 739
AcuI CTGAAG 2 cut(s) 836, 1116
AcyI GRCGYC 1 cut(s) 377
AfaI GTAC 5 cut(s) 353, 359, 392, 446, 494
AfiI CCNNNNNNNGG 4 cut(s) 874, 925, 969, 1047
AflIII ACRYGT 3 cut(s) 354, 393, 495
AgsI TTSAA 4 cut(s) 467, 608, 1004, 1082
AjnI CCWGG 1 cut(s) 792
AloI GAACNNNNNNTCC 2 cut(s) 621, 653
Alw21I GWGCWC 2 cut(s) 150, 249
Alw26I GTCTC 3 cut(s) 71, 711, 783
AlwI GGATC 3 cut(s) 534, 751, 954
AlwNI CAGNNNCTG 1 cut(s) 262
Ama87I CYCGRG 1 cut(s) 484
AoxI GGCC 3 cut(s) 321, 334, 780
ApaI GGGCCC 1 cut(s) 784
ApeKI GCWGC 2 cut(s) 617, 719
ApoI RAATTY 1 cut(s) 739
AspLEI GCGC 3 cut(s) 100, 225, 379
AspS9I GGNCC 4 cut(s) 163, 780, 781, 1053
AsuHPI GGTGA 2 cut(s) 139, 580
AsuII TTCGAA 1 cut(s) 120
AvaI CYCGRG 1 cut(s) 484
AvaII GGWCC 2 cut(s) 163, 1053
AxyI CCTNAGG 1 cut(s) 711
BaeGI GKGCMC 2 cut(s) 176, 784
BanI GGYRCC 1 cut(s) 376
BanII GRGCYC 4 cut(s) 36, 150, 249, 784
BarI GAAGNNNNNNTAC 2 cut(s) 341, 373
BauI CACGAG 1 cut(s) 591
Bbv12I GWGCWC 2 cut(s) 150, 249
BbvI GCAGC 2 cut(s) 629, 731
BccI CCATC 3 cut(s) 124, 970, 1064
BceAI ACGGC 5 cut(s) 178, 378, 471, 843, 891
BcgI CGANNNNNNTGC 2 cut(s) 954, 988
BciT130I CCWGG 1 cut(s) 794
BciVI GTATCC 1 cut(s) 146
BclI TGATCA 1 cut(s) 622
BcoDI GTCTC 3 cut(s) 71, 711, 783
BfaI CTAG 1 cut(s) 177
BfoI RGCGCY 1 cut(s) 380
BfuAI ACCTGC 1 cut(s) 174
BfuI GTATCC 1 cut(s) 146
BglII AGATCT 1 cut(s) 480
BlpI GCTNAGC 1 cut(s) 879
Bme1390I CCNGG 1 cut(s) 794
Bme18I GGWCC 2 cut(s) 163, 1053
BmeT110I CYCGRG 1 cut(s) 484
BmgT120I GGNCC 4 cut(s) 163, 780, 781, 1053
BmiI GGNNCC 2 cut(s) 378, 782
BmrFI CCNGG 1 cut(s) 794
BmsI GCATC 4 cut(s) 508, 568, 706, 919
BplI GAGNNNNNCTC 6 cut(s) 231, 263, 572, 604, 574, 606
BpmI CTGGAG 2 cut(s) 305, 687
Bpu10I CCTNAGC 3 cut(s) 11, 263, 684
Bpu1102I GCTNAGC 1 cut(s) 879
Bpu14I TTCGAA 1 cut(s) 120
BsaAI YACGTR 1 cut(s) 357
BsaHI GRCGYC 1 cut(s) 377
BsaI GGTCTC 2 cut(s) 71, 783
BsaXI ACNNNNNCTCC 4 cut(s) 374, 404, 621, 651
Bsc4I CCNNNNNNNGG 4 cut(s) 874, 925, 969, 1047
Bse118I RCCGGY 2 cut(s) 58, 332
Bse1I ACTGG 1 cut(s) 670
Bse21I CCTNAGG 1 cut(s) 711
BseBI CCWGG 1 cut(s) 794
BseGI GGATG 3 cut(s) 721, 934, 988
BseLI CCNNNNNNNGG 4 cut(s) 874, 925, 969, 1047
BseMII CTCAG 6 cut(s) 25, 254, 270, 725, 815, 870
BseNI ACTGG 1 cut(s) 670
BseRI GAGGAG 4 cut(s) 149, 699, 1060, 1063
BseSI GKGCMC 2 cut(s) 176, 784
BseX3I CGGCCG 1 cut(s) 321
BseXI GCAGC 2 cut(s) 629, 731
Bsh1236I CGCG 5 cut(s) 75, 98, 225, 292, 308
Bsh1285I CGRYCG 4 cut(s) 271, 301, 324, 346
BshFI GGCC 3 cut(s) 323, 336, 782
BshNI GGYRCC 1 cut(s) 376
BsiEI CGRYCG 4 cut(s) 271, 301, 324, 346
BsiHKAI GWGCWC 2 cut(s) 150, 249
BsiHKCI CYCGRG 1 cut(s) 484
BsiSI CCGG 3 cut(s) 59, 333, 380
BslI CCNNNNNNNGG 4 cut(s) 874, 925, 969, 1047
BsmAI GTCTC 3 cut(s) 71, 711, 783
BsnI GGCC 3 cut(s) 323, 336, 782
Bso31I GGTCTC 2 cut(s) 71, 783
BsoBI CYCGRG 1 cut(s) 484
Bsp119I TTCGAA 1 cut(s) 120
Bsp120I GGGCCC 1 cut(s) 780
Bsp1286I GDGCHC 5 cut(s) 36, 150, 176, 249, 784
Bsp1720I GCTNAGC 1 cut(s) 879
Bsp68I TCGCGA 2 cut(s) 292, 308
BspANI GGCC 3 cut(s) 323, 336, 782
BspCNI CTCAG 6 cut(s) 24, 255, 271, 724, 816, 871
BspFNI CGCG 5 cut(s) 75, 98, 225, 292, 308
BspLI GGNNCC 2 cut(s) 378, 782
BspMI ACCTGC 1 cut(s) 174
BspPI GGATC 3 cut(s) 534, 751, 954
BspQI GCTCTTC 2 cut(s) 603, 780
BspT104I TTCGAA 1 cut(s) 120
BspT107I GGYRCC 1 cut(s) 376
BspTNI GGTCTC 2 cut(s) 71, 783
BsrFI RCCGGY 2 cut(s) 58, 332
BsrI ACTGG 1 cut(s) 670
BssAI RCCGGY 2 cut(s) 58, 332
BssNI GRCGYC 1 cut(s) 377
BssSI CACGAG 1 cut(s) 591
Bst2BI CACGAG 1 cut(s) 591
Bst2UI CCWGG 1 cut(s) 794
Bst4CI ACNGT 4 cut(s) 533, 705, 925, 1142
Bst6I CTCTTC 6 cut(s) 117, 425, 573, 603, 780, 1128
BstACI GRCGYC 1 cut(s) 377
BstBAI YACGTR 1 cut(s) 357
BstBI TTCGAA 1 cut(s) 120
BstC8I GCNNGC 6 cut(s) 8, 50, 60, 245, 334, 615
BstF5I GGATG 3 cut(s) 721, 934, 988
BstFNI CGCG 5 cut(s) 75, 98, 225, 292, 308
BstH2I RGCGCY 1 cut(s) 380
BstHHI GCGC 3 cut(s) 100, 225, 379
BstMAI GTCTC 3 cut(s) 71, 711, 783
BstMCI CGRYCG 4 cut(s) 271, 301, 324, 346
BstMWI GCNNNNNNNGC 7 cut(s) 220, 253, 289, 326, 329, 779, 820
BstNI CCWGG 1 cut(s) 794
BstNSI RCATGY 2 cut(s) 397, 1161
BstSCI CCNGG 1 cut(s) 792
BstSLI GKGCMC 2 cut(s) 176, 784
BstUI CGCG 5 cut(s) 75, 98, 225, 292, 308
BstV1I GCAGC 2 cut(s) 629, 731
BstX2I RGATCY 1 cut(s) 480
BstXI CCANNNNNNTGG 1 cut(s) 1025
BstYI RGATCY 1 cut(s) 480
BstZI CGGCCG 1 cut(s) 321
Bsu36I CCTNAGG 1 cut(s) 711
BsuI GTATCC 1 cut(s) 146
BsuRI GGCC 3 cut(s) 323, 336, 782
BtgZI GCGATG 1 cut(s) 531
BtsCI GGATG 3 cut(s) 721, 934, 988
BtsIMutI CAGTG 3 cut(s) 276, 538, 894
BtuMI TCGCGA 2 cut(s) 292, 308
BveI ACCTGC 1 cut(s) 174
Cac8I GCNNGC 6 cut(s) 8, 50, 60, 245, 334, 615
CaiI CAGNNNCTG 1 cut(s) 262
CciNI GCGGCCGC 1 cut(s) 321
CfoI GCGC 3 cut(s) 100, 225, 379
Cfr10I RCCGGY 2 cut(s) 58, 332
Cfr13I GGNCC 4 cut(s) 163, 780, 781, 1053
CseI GACGC 1 cut(s) 872
Csp6I GTAC 5 cut(s) 352, 358, 391, 445, 493
CviAII CATG 6 cut(s) 394, 626, 724, 869, 1042, 1158
CviQI GTAC 5 cut(s) 352, 358, 391, 445, 493
DinI GGCGCC 1 cut(s) 378
EaeI YGGCCR 1 cut(s) 321
EagI CGGCCG 1 cut(s) 321
Eam1104I CTCTTC 6 cut(s) 117, 425, 573, 603, 780, 1128
EarI CTCTTC 6 cut(s) 117, 425, 573, 603, 780, 1128
EciI GGCGGA 2 cut(s) 380, 473
Ecl136II GAGCTC 2 cut(s) 148, 247
EclXI CGGCCG 1 cut(s) 321
Eco24I GRGCYC 4 cut(s) 36, 150, 249, 784
Eco31I GGTCTC 2 cut(s) 71, 783
Eco47I GGWCC 2 cut(s) 163, 1053
Eco52I CGGCCG 1 cut(s) 321
Eco53kI GAGCTC 2 cut(s) 148, 247
Eco57I CTGAAG 2 cut(s) 836, 1116
Eco81I CCTNAGG 1 cut(s) 711
Eco88I CYCGRG 1 cut(s) 484
EcoICRI GAGCTC 2 cut(s) 148, 247
EcoO109I RGGNCCY 2 cut(s) 781, 1053
EcoRII CCWGG 1 cut(s) 792
EcoT38I GRGCYC 4 cut(s) 36, 150, 249, 784
EgeI GGCGCC 1 cut(s) 378
EheI GGCGCC 1 cut(s) 378
FaeI CATG 6 cut(s) 397, 629, 727, 872, 1045, 1161
FalI AAGNNNNNCTT 4 cut(s) 634, 666, 984, 1016
FatI CATG 6 cut(s) 393, 625, 723, 868, 1041, 1157
FauI CCCGC 1 cut(s) 57
FbaI TGATCA 1 cut(s) 622
FokI GGATG 3 cut(s) 728, 941, 995
FriOI GRGCYC 4 cut(s) 36, 150, 249, 784
FspBI CTAG 1 cut(s) 177
GlaI GCGC 3 cut(s) 99, 224, 378
GsuI CTGGAG 2 cut(s) 305, 687
HaeII RGCGCY 1 cut(s) 380
HaeIII GGCC 3 cut(s) 323, 336, 782
HapII CCGG 3 cut(s) 59, 333, 380
HgaI GACGC 1 cut(s) 872
HhaI GCGC 3 cut(s) 100, 225, 379
Hin1I GRCGYC 1 cut(s) 377
Hin1II CATG 6 cut(s) 397, 629, 727, 872, 1045, 1161
Hin6I GCGC 3 cut(s) 98, 223, 377
HinP1I GCGC 3 cut(s) 98, 223, 377
HincII GTYRAC 1 cut(s) 1012
HindII GTYRAC 1 cut(s) 1012
HinfI GANTC 5 cut(s) 18, 217, 273, 287, 294
HpaII CCGG 3 cut(s) 59, 333, 380
HphI GGTGA 2 cut(s) 139, 580
Hpy166II GTNNAC 8 cut(s) 354, 360, 399, 453, 495, 501, 894, 1012
Hpy188I TCNGA 5 cut(s) 152, 239, 348, 746, 756
Hpy188III TCNNGA 6 cut(s) 13, 291, 307, 484, 713, 1130
Hpy8I GTNNAC 8 cut(s) 354, 360, 399, 453, 495, 501, 894, 1012
Hpy99I CGWCG 2 cut(s) 199, 406
HpyAV CCTTC 6 cut(s) 120, 461, 535, 568, 811, 1091
HpyCH4III ACNGT 4 cut(s) 533, 705, 925, 1142
HpyCH4IV ACGT 2 cut(s) 356, 497
HpyCH4V TGCA 4 cut(s) 256, 521, 617, 719
HpyF10VI GCNNNNNNNGC 7 cut(s) 220, 253, 289, 326, 329, 779, 820
HpySE526I ACGT 2 cut(s) 356, 497
Hsp92I GRCGYC 1 cut(s) 377
Hsp92II CATG 6 cut(s) 397, 629, 727, 872, 1045, 1161
HspAI GCGC 3 cut(s) 98, 223, 377
KasI GGCGCC 1 cut(s) 376
KroI GCCGGC 2 cut(s) 58, 332
KroNI GCCGGC 2 cut(s) 60, 334
Ksp22I TGATCA 1 cut(s) 622
LguI GCTCTTC 2 cut(s) 603, 780
LmnI GCTCC 3 cut(s) 629, 820, 921
Lsp1109I GCAGC 2 cut(s) 629, 731
LweI GCATC 4 cut(s) 508, 568, 706, 919
MaeI CTAG 1 cut(s) 177
MaeII ACGT 2 cut(s) 356, 497
MaeIII GTNAC 1 cut(s) 274
MflI RGATCY 1 cut(s) 480
MhlI GDGCHC 5 cut(s) 36, 150, 176, 249, 784
MluCI AATT 1 cut(s) 739
Mly113I GGCGCC 1 cut(s) 377
MlyI GAGTC 2 cut(s) 282, 296
MreI CGCCGGCG 1 cut(s) 58
MroNI GCCGGC 2 cut(s) 58, 332
MseI TTAA 2 cut(s) 837, 950
MslI CAYNNNNRTG 1 cut(s) 1162
MspA1I CMGCKG 2 cut(s) 620, 1025
MspI CCGG 3 cut(s) 59, 333, 380
MspR9I CCNGG 1 cut(s) 794
MvaI CCWGG 1 cut(s) 794
MvnI CGCG 5 cut(s) 75, 98, 225, 292, 308
MwoI GCNNNNNNNGC 7 cut(s) 220, 253, 289, 326, 329, 779, 820
NaeI GCCGGC 2 cut(s) 60, 334
NarI GGCGCC 1 cut(s) 377
NgoMIV GCCGGC 2 cut(s) 58, 332
NlaIII CATG 6 cut(s) 397, 629, 727, 872, 1045, 1161
NlaIV GGNNCC 2 cut(s) 378, 782
NmuCI GTSAC 1 cut(s) 274
NotI GCGGCCGC 1 cut(s) 321
NruI TCGCGA 2 cut(s) 292, 308
NspI RCATGY 2 cut(s) 397, 1161
NspV TTCGAA 1 cut(s) 120
PaeR7I CTCGAG 1 cut(s) 484
PciI ACATGT 1 cut(s) 393
PciSI GCTCTTC 2 cut(s) 603, 780
PcsI WCGNNNNNNNCGW 1 cut(s) 27
PdiI GCCGGC 2 cut(s) 60, 334
PfeI GAWTC 3 cut(s) 18, 217, 294
PflFI GACNNNGTC 1 cut(s) 272
Ple19I CGATCG 2 cut(s) 301, 346
PleI GAGTC 2 cut(s) 281, 295
PluTI GGCGCC 1 cut(s) 380
PpsI GAGTC 2 cut(s) 281, 295
Ppu21I YACGTR 1 cut(s) 357
PpuMI RGGWCCY 1 cut(s) 1053
PscI ACATGT 1 cut(s) 393
Psp124BI GAGCTC 2 cut(s) 150, 249
Psp5II RGGWCCY 1 cut(s) 1053
Psp6I CCWGG 1 cut(s) 792
PspGI CCWGG 1 cut(s) 792
PspN4I GGNNCC 2 cut(s) 378, 782
PspOMI GGGCCC 1 cut(s) 780
PspPI GGNCC 4 cut(s) 163, 780, 781, 1053
PspPPI RGGWCCY 1 cut(s) 1053
PstNI CAGNNNCTG 1 cut(s) 262
PsuI RGATCY 1 cut(s) 480
PsyI GACNNNGTC 1 cut(s) 272
PvuI CGATCG 2 cut(s) 301, 346
PvuII CAGCTG 2 cut(s) 620, 1025
RruI TCGCGA 2 cut(s) 292, 308
RsaI GTAC 5 cut(s) 353, 359, 392, 446, 494
RsaNI GTAC 5 cut(s) 352, 358, 391, 445, 493
RseI CAYNNNNRTG 1 cut(s) 1162
SacI GAGCTC 2 cut(s) 150, 249
SapI GCTCTTC 2 cut(s) 603, 780
SaqAI TTAA 2 cut(s) 837, 950
Sau96I GGNCC 4 cut(s) 163, 780, 781, 1053
SchI GAGTC 2 cut(s) 282, 296
ScrFI CCNGG 1 cut(s) 794
SduI GDGCHC 5 cut(s) 36, 150, 176, 249, 784
SfaNI GCATC 4 cut(s) 508, 568, 706, 919
SfoI GGCGCC 1 cut(s) 378
Sfr274I CTCGAG 1 cut(s) 484
SfuI TTCGAA 1 cut(s) 120
SgrAI CRCCGGYG 1 cut(s) 58
SinI GGWCC 2 cut(s) 163, 1053
SlaI CTCGAG 1 cut(s) 484
SmiMI CAYNNNNRTG 1 cut(s) 1162
SmlI CTYRAG 1 cut(s) 484
SmoI CTYRAG 1 cut(s) 484
Sse9I AATT 1 cut(s) 739
SspDI GGCGCC 1 cut(s) 376
SspMI CTAG 1 cut(s) 177
SstI GAGCTC 2 cut(s) 150, 249
StyD4I CCNGG 1 cut(s) 792
TaaI ACNGT 4 cut(s) 533, 705, 925, 1142
TaiI ACGT 2 cut(s) 359, 500
TaqI TCGA 9 cut(s) 21, 30, 120, 144, 297, 342, 485, 509, 974
TaqII GACCGA 1 cut(s) 285
TasI AATT 1 cut(s) 739
TatI WGTACW 4 cut(s) 351, 390, 444, 492
TauI GCSGC 9 cut(s) 55, 58, 95, 98, 323, 326, 329, 332, 858
TfiI GAWTC 3 cut(s) 18, 217, 294
Tru1I TTAA 2 cut(s) 837, 950
Tru9I TTAA 2 cut(s) 837, 950
TscAI CASTG 3 cut(s) 283, 538, 901
TseFI GTSAC 1 cut(s) 274
TseI GCWGC 2 cut(s) 617, 719
Tsp45I GTSAC 1 cut(s) 274
TspGWI ACGGA 2 cut(s) 419, 749
TspRI CASTG 3 cut(s) 283, 538, 901
Tth111I GACNNNGTC 1 cut(s) 272
VpaK11BI GGWCC 2 cut(s) 163, 1053
XapI RAATTY 1 cut(s) 739
XceI RCATGY 2 cut(s) 397, 1161
XhoI CTCGAG 1 cut(s) 484
XspI CTAG 1 cut(s) 177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.