pycom01g19390

BAG family molecular chaperone regulator

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
18053071 .. 18054177
1107 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g19390.2

Sequence Viewer

Length: 450 bp
ATGATACAGATGACTTTCAGAGCTTATCTGATCCGCAGATCACAGGCTCTTAGGGCCCTTCGGGATCTCGCTGTTGCCAAGTCCAAGTTGAAGGAGCTCAGGGCACTGTTTAATAACTTCTCTTACCGCCGCCGTGTTGCCCATGATGCAGCAGAGCGTCAGAGGTTCACTGAAAGAATCATCGTCCTGCTCCTCACTGTTGATGCCATTGAGGGTGTCGATGTGATGGTGCGTTCAGCAAAGAGGTCAATGGTGGATGAACTTGAAGCGATGCTTGATGTGGTTGACCCTCAGCCTGCTGGTGCTGGAAAATCACTTTCCATGAAGAGGAGGACCTTCGATATGCCAGATGGTGTCATTCAGAGGGAAATCGCCGAAGGTGTGGCACAGGTTGTCCAAATGCTTGAACGCGAAGAGAACAGTTCTAATACCTTTGAGGCATGCTTGTGA

Protein Analysis

150

Amino Acids

16.99

Weight (kDa)

9.29

Isoelectric Point (pI)

57.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 411
AciI CCGC 3 cut(s) 34, 127, 130
AclWI GGATC 2 cut(s) 25, 72
AfiI CCNNNNNNNGG 1 cut(s) 327
AgsI TTSAA 3 cut(s) 91, 266, 407
AluBI AGCT 2 cut(s) 23, 97
AluI AGCT 2 cut(s) 23, 97
Alw21I GWGCWC 1 cut(s) 99
AlwI GGATC 2 cut(s) 25, 72
AoxI GGCC 1 cut(s) 54
ApaI GGGCCC 1 cut(s) 58
ApeKI GCWGC 1 cut(s) 149
AspS9I GGNCC 3 cut(s) 54, 55, 333
AvaII GGWCC 1 cut(s) 333
BaeGI GKGCMC 2 cut(s) 58, 106
BanII GRGCYC 2 cut(s) 58, 99
Bbv12I GWGCWC 1 cut(s) 99
BbvCI CCTCAGC 1 cut(s) 291
BbvI GCAGC 1 cut(s) 161
BccI CCATC 2 cut(s) 220, 344
BceAI ACGGC 1 cut(s) 117
BisI GCNGC 2 cut(s) 130, 150
BlsI GCNGC 2 cut(s) 131, 151
Bme18I GGWCC 1 cut(s) 333
BmgT120I GGNCC 3 cut(s) 54, 55, 333
BmiI GGNNCC 1 cut(s) 56
BmsI GCATC 3 cut(s) 136, 193, 261
Bpu10I CCTNAGC 2 cut(s) 98, 291
Bsc4I CCNNNNNNNGG 1 cut(s) 327
BseGI GGATG 1 cut(s) 262
BseLI CCNNNNNNNGG 1 cut(s) 327
BseMII CTCAG 2 cut(s) 112, 305
BseRI GAGGAG 2 cut(s) 182, 343
BseSI GKGCMC 2 cut(s) 58, 106
BseXI GCAGC 1 cut(s) 161
Bsh1236I CGCG 1 cut(s) 411
BshFI GGCC 1 cut(s) 56
BsiHKAI GWGCWC 1 cut(s) 99
BslI CCNNNNNNNGG 1 cut(s) 327
BsnI GGCC 1 cut(s) 56
Bsp120I GGGCCC 1 cut(s) 54
Bsp1286I GDGCHC 3 cut(s) 58, 99, 106
Bsp143I GATC 3 cut(s) 30, 38, 64
BspACI CCGC 3 cut(s) 34, 127, 130
BspANI GGCC 1 cut(s) 56
BspCNI CTCAG 2 cut(s) 111, 304
BspFNI CGCG 1 cut(s) 411
BspLI GGNNCC 1 cut(s) 56
BspPI GGATC 2 cut(s) 25, 72
BssMI GATC 3 cut(s) 30, 38, 64
Bst4CI ACNGT 3 cut(s) 108, 199, 422
Bst6I CTCTTC 2 cut(s) 320, 408
BstC8I GCNNGC 2 cut(s) 297, 442
BstDEI CTNAG 3 cut(s) 50, 98, 291
BstF5I GGATG 1 cut(s) 262
BstFNI CGCG 1 cut(s) 411
BstKTI GATC 3 cut(s) 33, 41, 67
BstMBI GATC 3 cut(s) 30, 38, 64
BstMWI GCNNNNNNNGC 2 cut(s) 53, 146
BstNSI RCATGY 1 cut(s) 444
BstSLI GKGCMC 2 cut(s) 58, 106
BstUI CGCG 1 cut(s) 411
BstV1I GCAGC 1 cut(s) 161
BstX2I RGATCY 1 cut(s) 64
BstYI RGATCY 1 cut(s) 64
BsuRI GGCC 1 cut(s) 56
BtgZI GCGATG 1 cut(s) 284
BtsCI GGATG 1 cut(s) 262
BtsIMutI CAGTG 3 cut(s) 104, 168, 195
Cac8I GCNNGC 2 cut(s) 297, 442
Cfr13I GGNCC 3 cut(s) 54, 55, 333
CseI GACGC 1 cut(s) 146
CviAII CATG 3 cut(s) 143, 322, 441
CviJI RGCY 5 cut(s) 23, 47, 56, 97, 295
CviKI_1 RGCY 5 cut(s) 23, 47, 56, 97, 295
DdeI CTNAG 3 cut(s) 50, 98, 291
DpnI GATC 3 cut(s) 32, 40, 66
DpnII GATC 3 cut(s) 30, 38, 64
Eam1104I CTCTTC 2 cut(s) 320, 408
EarI CTCTTC 2 cut(s) 320, 408
Ecl136II GAGCTC 1 cut(s) 97
Eco24I GRGCYC 2 cut(s) 58, 99
Eco47I GGWCC 1 cut(s) 333
Eco53kI GAGCTC 1 cut(s) 97
EcoICRI GAGCTC 1 cut(s) 97
EcoO109I RGGNCCY 3 cut(s) 54, 55, 333
EcoT38I GRGCYC 2 cut(s) 58, 99
FaeI CATG 3 cut(s) 146, 325, 444
FaiI YATR 4 cut(s) 144, 323, 344, 442
FalI AAGNNNNNCTT 2 cut(s) 258, 290
FatI CATG 3 cut(s) 142, 321, 440
Fnu4HI GCNGC 2 cut(s) 130, 150
FokI GGATG 1 cut(s) 269
FriOI GRGCYC 2 cut(s) 58, 99
Fsp4HI GCNGC 2 cut(s) 130, 150
GluI GCNGC 2 cut(s) 130, 150
HaeIII GGCC 1 cut(s) 56
HgaI GACGC 1 cut(s) 146
Hin1II CATG 3 cut(s) 146, 325, 444
HincII GTYRAC 1 cut(s) 286
HindII GTYRAC 1 cut(s) 286
HinfI GANTC 1 cut(s) 177
Hpy166II GTNNAC 2 cut(s) 168, 286
Hpy188I TCNGA 4 cut(s) 20, 30, 162, 363
Hpy188III TCNNGA 1 cut(s) 62
Hpy8I GTNNAC 2 cut(s) 168, 286
HpyAV CCTTC 4 cut(s) 68, 85, 346, 371
HpyCH4III ACNGT 3 cut(s) 108, 199, 422
HpyCH4V TGCA 1 cut(s) 149
HpyF10VI GCNNNNNNNGC 2 cut(s) 53, 146
HpyF3I CTNAG 3 cut(s) 50, 98, 291
Hsp92II CATG 3 cut(s) 146, 325, 444
Kzo9I GATC 3 cut(s) 30, 38, 64
LmnI GCTCC 2 cut(s) 94, 195
LpnPI CCDG 8 cut(s) 29, 85, 200, 285, 291, 309, 360, 374
Lsp1109I GCAGC 1 cut(s) 161
LweI GCATC 3 cut(s) 136, 193, 261
MalI GATC 3 cut(s) 32, 40, 66
MboI GATC 3 cut(s) 30, 38, 64
MboII GAAGA 2 cut(s) 337, 425
MflI RGATCY 1 cut(s) 64
MhlI GDGCHC 3 cut(s) 58, 99, 106
MnlI CCTC 9 cut(s) 156, 203, 205, 237, 300, 321, 324, 357, 430
MseI TTAA 1 cut(s) 111
MslI CAYNNNNRTG 1 cut(s) 445
MvnI CGCG 1 cut(s) 411
MwoI GCNNNNNNNGC 2 cut(s) 53, 146
NdeII GATC 3 cut(s) 30, 38, 64
NlaIII CATG 3 cut(s) 146, 325, 444
NlaIV GGNNCC 1 cut(s) 56
NspI RCATGY 1 cut(s) 444
PaeI GCATGC 1 cut(s) 444
PfeI GAWTC 1 cut(s) 177
PkrI GCNGC 2 cut(s) 131, 151
PpuMI RGGWCCY 1 cut(s) 333
Psp124BI GAGCTC 1 cut(s) 99
Psp5II RGGWCCY 1 cut(s) 333
PspN4I GGNNCC 1 cut(s) 56
PspOMI GGGCCC 1 cut(s) 54
PspPI GGNCC 3 cut(s) 54, 55, 333
PspPPI RGGWCCY 1 cut(s) 333
PsuI RGATCY 1 cut(s) 64
RseI CAYNNNNRTG 1 cut(s) 445
SacI GAGCTC 1 cut(s) 99
SaqAI TTAA 1 cut(s) 111
SatI GCNGC 2 cut(s) 130, 150
Sau3AI GATC 3 cut(s) 30, 38, 64
Sau96I GGNCC 3 cut(s) 54, 55, 333
SduI GDGCHC 3 cut(s) 58, 99, 106
SetI ASST 8 cut(s) 25, 99, 167, 248, 338, 382, 393, 434
SfaNI GCATC 3 cut(s) 136, 193, 261
SinI GGWCC 1 cut(s) 333
SmiMI CAYNNNNRTG 1 cut(s) 445
SphI GCATGC 1 cut(s) 444
SsiI CCGC 3 cut(s) 34, 127, 130
SstI GAGCTC 1 cut(s) 99
TaaI ACNGT 3 cut(s) 108, 199, 422
TaqI TCGA 2 cut(s) 219, 339
TauI GCSGC 1 cut(s) 132
TfiI GAWTC 1 cut(s) 177
Tru1I TTAA 1 cut(s) 111
Tru9I TTAA 1 cut(s) 111
TscAI CASTG 3 cut(s) 111, 175, 202
TseI GCWGC 1 cut(s) 149
TspDTI ATGAA 2 cut(s) 273, 338
TspRI CASTG 3 cut(s) 111, 175, 202
VpaK11BI GGWCC 1 cut(s) 333
XceI RCATGY 1 cut(s) 444
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.