Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0008412

Physical Location & Seq

Genomic Coordinates Reverse (-)

28648262 .. 28649566

Gene Structure 1305 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G295300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 759 bp

ATGTTCTACAGTCCTTCTTCAAACGACTATAAAATAGCCCTCCCCACCAATGCGTCTCCACAACCAAACAAACACGTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTAGCTTCCTTCAATTAGCCACATCCTCTATCCTTTTTCATTACAAATACATGGCTTCTAACATGAGCTTGAAGACCCTTGCTGTGCTGGCTCTTGCCCTTGCCGTCTGTGTGCAAGCCACCCTAGGAGCAATAACATGCGAGGATCTAGACAAAGACACATGCGCATTCGCTGTGTCGTCGTCCAGCAAACGCTGTGTGCTTGAGAAGCATGTGCGGAGAAGCGGAGAGGAAGCATACACGTGCCGCACATCAGAGATTGAGGCAGATAAATTGAAGGACTGGGTGGAGAGTGAGCAGTGCATCAAGTCTTGTGGGCTTGACCGCAAATCCTATGGCATCTGCTCAGACTCTCTCCTGGAGTCTCGCTTCACCCAAAAGCTTTGCTCCCCTCAGTGCTACAACACCTGCCCCAACATTGTTGACCTTTACTTCAATCTTGCCGCTGGTGAAGGGGTATTTCTACCAAAATTATGTGAAGCACAGGGAGCAAATGCTCGTCGACAGATGTCGGAGATCCGTAGCTCTGGATTTGTTGCACCAGGACCAATCCACCCTGCAAATTTGGTAGCACCCGGACCAATTAAGTCAGCCAATTTGGTAGCATCCACACCAACAGAGGTTGCTCCAGCACAGCCTCCTTACTATAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PAR1

Protein Analysis

253

Amino Acids

27.28

Weight (kDa)

7.46

Isoelectric Point (pI)

66.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008412)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52390
fragaria_vesca	FvH4_7g29560
malus_domestica	MD01G1201900.v1.1 MD07G1270900.v1.1
prunus_persica	Prupe.2G295300_v2.0.a1
pyrus_communis	pycom01g21160 pycom07g24810
rosa_chinensis	RchiOBHm_Chr1g0377551
rosa_laevigata	RLG00000009122 RLG00000026520
rosa_multiflora	Rmu_sc0002832.1_g000006 Rmu_sc0012587.1_g000004
rosa_roxburghii	Rroxscaffold_4G00281240 Rroxscaffold_5G00346330
rosa_rugosa	Rorug01G0403400 Rorug04G0032700
rosa_samantha	Rh1AG421400 Rh1BG379900 Rh1CG394100 Rh1DG411100 Rh4BG103200 Rh4DG101100
rosa_wichuraiana	Rw1G036940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	521
Acc16I	TGCGCA	1 cut(s)	271
Acc36I	ACCTGC	1 cut(s)	521
AccI	GTMKAC	1 cut(s)	607
AciI	CCGC	5 cut(s)	322, 330, 352, 430, 549
AclWI	GGATC	2 cut(s)	258, 616
AcsI	RAATTY	1 cut(s)	667
AcvI	CACGTG	1 cut(s)	348
AflIII	ACRYGT	2 cut(s)	73, 345
AgsI	TTSAA	5 cut(s)	21, 119, 178, 382, 541
AjnI	CCWGG	2 cut(s)	462, 646
AluBI	AGCT	4 cut(s)	111, 174, 487, 630
AluI	AGCT	4 cut(s)	111, 174, 487, 630
Alw26I	GTCTC	2 cut(s)	60, 474
AlwI	GGATC	2 cut(s)	258, 616
ApoI	RAATTY	1 cut(s)	667
AspA2I	CCTAGG	1 cut(s)	229
AspLEI	GCGC	1 cut(s)	272
AspS9I	GGNCC	2 cut(s)	650, 683
AsuC2I	CCSGG	1 cut(s)	681
AsuHPI	GGTGA	2 cut(s)	469, 566
AvaII	GGWCC	2 cut(s)	650, 683
AvrII	CCTAGG	1 cut(s)	229
BbrPI	CACGTG	1 cut(s)	348
BbsI	GAAGAC	1 cut(s)	185
BceAI	ACGGC	1 cut(s)	194
BciT130I	CCWGG	2 cut(s)	464, 648
BcnI	CCSGG	1 cut(s)	681
BcoDI	GTCTC	2 cut(s)	60, 474
BfaI	CTAG	3 cut(s)	108, 230, 254
BfmI	CTRYAG	1 cut(s)	7
BfuAI	ACCTGC	1 cut(s)	521
BisI	GCNGC	2 cut(s)	352, 549
BlnI	CCTAGG	1 cut(s)	229
BlsI	GCNGC	2 cut(s)	353, 550
Bme1390I	CCNGG	3 cut(s)	464, 648, 681
Bme18I	GGWCC	2 cut(s)	650, 683
BmgT120I	GGNCC	2 cut(s)	650, 683
BmrFI	CCNGG	3 cut(s)	464, 648, 681
BmrI	ACTGGG	1 cut(s)	397
BmsI	GCATC	3 cut(s)	417, 453, 719
BmuI	ACTGGG	1 cut(s)	397
BoxI	GACNNNNGTC	1 cut(s)	613
BpiI	GAAGAC	1 cut(s)	185
BpmI	CTGGAG	2 cut(s)	485, 717
BpuEI	CTTGAG	1 cut(s)	329
BpuMI	CCSGG	1 cut(s)	681
BsaAI	YACGTR	1 cut(s)	348
BsaJI	CCNNGG	1 cut(s)	229
Bse1I	ACTGG	1 cut(s)	392
BseBI	CCWGG	2 cut(s)	464, 648
BseDI	CCNNGG	1 cut(s)	229
BseGI	GGATG	2 cut(s)	128, 710
BseMII	CTCAG	2 cut(s)	465, 512
BseNI	ACTGG	1 cut(s)	392
BseRI	GAGGAG	8 cut(s)	72, 75, 78, 81, 84, 87, 90, 93
BsiSI	CCGG	1 cut(s)	681
BsmAI	GTCTC	2 cut(s)	60, 474
BsmBI	CGTCTC	1 cut(s)	60
BsmI	GAATGC	1 cut(s)	272
Bsp143I	GATC	2 cut(s)	250, 621
BspACI	CCGC	5 cut(s)	322, 330, 352, 430, 549
BspCNI	CTCAG	2 cut(s)	464, 511
BspMI	ACCTGC	1 cut(s)	521
BspPI	GGATC	2 cut(s)	258, 616
BsrI	ACTGG	1 cut(s)	392
BssECI	CCNNGG	1 cut(s)	229
BssMI	GATC	2 cut(s)	250, 621
BssT1I	CCWWGG	1 cut(s)	229
Bst2UI	CCWGG	2 cut(s)	464, 648
Bst4CI	ACNGT	1 cut(s)	11
BstBAI	YACGTR	1 cut(s)	348
BstC8I	GCNNGC	2 cut(s)	195, 222
BstDEI	CTNAG	2 cut(s)	451, 498
BstF5I	GGATG	2 cut(s)	128, 710
BstHHI	GCGC	1 cut(s)	272
BstKTI	GATC	2 cut(s)	253, 624
BstMAI	GTCTC	2 cut(s)	60, 474
BstMBI	GATC	2 cut(s)	250, 621
BstMWI	GCNNNNNNNGC	3 cut(s)	194, 313, 593
BstNI	CCWGG	2 cut(s)	464, 648
BstNSI	RCATGY	3 cut(s)	246, 270, 320
BstPAI	GACNNNNGTC	1 cut(s)	613
BstSCI	CCNGG	3 cut(s)	462, 646, 679
BstSFI	CTRYAG	1 cut(s)	7
BstV2I	GAAGAC	1 cut(s)	185
BstX2I	RGATCY	2 cut(s)	250, 621
BstYI	RGATCY	2 cut(s)	250, 621
BtsCI	GGATG	2 cut(s)	128, 710
BtsI	GCAGTG	1 cut(s)	410
BtsIMutI	CAGTG	2 cut(s)	410, 506
BveI	ACCTGC	1 cut(s)	521
Cac8I	GCNNGC	2 cut(s)	195, 222
CfoI	GCGC	1 cut(s)	272
Cfr13I	GGNCC	2 cut(s)	650, 683
CseI	GACGC	1 cut(s)	42
CspCI	CAANNNNNGTGG	2 cut(s)	400, 435
CviAII	CATG	5 cut(s)	157, 169, 243, 267, 317
DdeI	CTNAG	2 cut(s)	451, 498
DpnI	GATC	2 cut(s)	252, 623
DpnII	GATC	2 cut(s)	250, 621
Eco130I	CCWWGG	1 cut(s)	229
Eco47I	GGWCC	2 cut(s)	650, 683
Eco72I	CACGTG	1 cut(s)	348
EcoRII	CCWGG	2 cut(s)	462, 646
EcoT14I	CCWWGG	1 cut(s)	229
ErhI	CCWWGG	1 cut(s)	229
Esp3I	CGTCTC	1 cut(s)	60
FaeI	CATG	5 cut(s)	160, 172, 246, 270, 320
FatI	CATG	5 cut(s)	156, 168, 242, 266, 316
FblI	GTMKAC	1 cut(s)	607
Fnu4HI	GCNGC	2 cut(s)	352, 549
FokI	GGATG	2 cut(s)	115, 697
Fsp4HI	GCNGC	2 cut(s)	352, 549
FspAI	RTGCGCAY	1 cut(s)	271
FspBI	CTAG	3 cut(s)	108, 230, 254
FspI	TGCGCA	1 cut(s)	271
GlaI	GCGC	1 cut(s)	271
GluI	GCNGC	2 cut(s)	352, 549
GsuI	CTGGAG	2 cut(s)	485, 717
HapII	CCGG	1 cut(s)	681
HgaI	GACGC	1 cut(s)	42
HhaI	GCGC	1 cut(s)	272
Hin1II	CATG	5 cut(s)	160, 172, 246, 270, 320
Hin6I	GCGC	1 cut(s)	270
HinP1I	GCGC	1 cut(s)	270
HincII	GTYRAC	2 cut(s)	529, 608
HindII	GTYRAC	2 cut(s)	529, 608
HindIII	AAGCTT	1 cut(s)	485
HinfI	GANTC	2 cut(s)	455, 467
HpaII	CCGG	1 cut(s)	681
HphI	GGTGA	2 cut(s)	469, 566
Hpy166II	GTNNAC	2 cut(s)	529, 608
Hpy188I	TCNGA	3 cut(s)	361, 454, 619
Hpy188III	TCNNGA	2 cut(s)	254, 633
Hpy8I	GTNNAC	2 cut(s)	529, 608
Hpy99I	CGWCG	2 cut(s)	289, 609
HpyAV	CCTTC	4 cut(s)	24, 125, 376, 551
HpyCH4III	ACNGT	1 cut(s)	11
HpyCH4IV	ACGT	2 cut(s)	75, 347
HpyCH4V	TGCA	4 cut(s)	220, 408, 644, 665
HpyF10VI	GCNNNNNNNGC	3 cut(s)	194, 313, 593
HpyF3I	CTNAG	2 cut(s)	451, 498
HpySE526I	ACGT	2 cut(s)	75, 347
Hsp92II	CATG	5 cut(s)	160, 172, 246, 270, 320
HspAI	GCGC	1 cut(s)	270
Kzo9I	GATC	2 cut(s)	250, 621
LmnI	GCTCC	4 cut(s)	233, 497, 593, 736
LweI	GCATC	3 cut(s)	417, 453, 719
MaeI	CTAG	3 cut(s)	108, 230, 254
MaeII	ACGT	2 cut(s)	75, 347
MalI	GATC	2 cut(s)	252, 623
MboI	GATC	2 cut(s)	250, 621
MboII	GAAGA	2 cut(s)	9, 190
MflI	RGATCY	2 cut(s)	250, 621
MluCI	AATT	6 cut(s)	119, 377, 575, 667, 687, 700
MlyI	GAGTC	2 cut(s)	449, 476
MmeI	TCCRAC	1 cut(s)	597
MseI	TTAA	1 cut(s)	690
MslI	CAYNNNNRTG	1 cut(s)	346
MspA1I	CMGCKG	1 cut(s)	551
MspI	CCGG	1 cut(s)	681
MspR9I	CCNGG	3 cut(s)	464, 648, 681
Mva1269I	GAATGC	1 cut(s)	272
MvaI	CCWGG	2 cut(s)	464, 648
MwoI	GCNNNNNNNGC	3 cut(s)	194, 313, 593
NciI	CCSGG	1 cut(s)	681
NdeII	GATC	2 cut(s)	250, 621
NlaIII	CATG	5 cut(s)	160, 172, 246, 270, 320
NsbI	TGCGCA	1 cut(s)	271
NspI	RCATGY	3 cut(s)	246, 270, 320
PaqCI	CACCTGC	1 cut(s)	521
PctI	GAATGC	1 cut(s)	272
PfoI	TCCNGGA	1 cut(s)	462
PkrI	GCNGC	2 cut(s)	353, 550
PleI	GAGTC	2 cut(s)	449, 475
PmaCI	CACGTG	1 cut(s)	348
PmlI	CACGTG	1 cut(s)	348
PpsI	GAGTC	2 cut(s)	449, 475
Ppu21I	YACGTR	1 cut(s)	348
PshAI	GACNNNNGTC	1 cut(s)	613
Psp6I	CCWGG	2 cut(s)	462, 646
PspCI	CACGTG	1 cut(s)	348
PspGI	CCWGG	2 cut(s)	462, 646
PspPI	GGNCC	2 cut(s)	650, 683
PsuI	RGATCY	2 cut(s)	250, 621
RseI	CAYNNNNRTG	1 cut(s)	346
SalI	GTCGAC	1 cut(s)	606
SaqAI	TTAA	1 cut(s)	690
SatI	GCNGC	2 cut(s)	352, 549
Sau3AI	GATC	2 cut(s)	250, 621
Sau96I	GGNCC	2 cut(s)	650, 683
SchI	GAGTC	2 cut(s)	449, 476
ScrFI	CCNGG	3 cut(s)	464, 648, 681
SetI	ASST	9 cut(s)	78, 113, 176, 350, 489, 515, 534, 632, 729
SfaNI	GCATC	3 cut(s)	417, 453, 719
SfcI	CTRYAG	1 cut(s)	7
SinI	GGWCC	2 cut(s)	650, 683
SmiMI	CAYNNNNRTG	1 cut(s)	346
SmlI	CTYRAG	1 cut(s)	308
SmoI	CTYRAG	1 cut(s)	308
Sse9I	AATT	6 cut(s)	119, 377, 575, 667, 687, 700
SsiI	CCGC	5 cut(s)	322, 330, 352, 430, 549
SspMI	CTAG	3 cut(s)	108, 230, 254
StyD4I	CCNGG	3 cut(s)	462, 646, 679
StyI	CCWWGG	1 cut(s)	229
TaaI	ACNGT	1 cut(s)	11
TaiI	ACGT	2 cut(s)	78, 350
TaqI	TCGA	1 cut(s)	607
TasI	AATT	6 cut(s)	119, 377, 575, 667, 687, 700
TauI	GCSGC	2 cut(s)	354, 551
Tru1I	TTAA	1 cut(s)	690
Tru9I	TTAA	1 cut(s)	690
TscAI	CASTG	2 cut(s)	410, 506
TspDTI	ATGAA	1 cut(s)	134
TspGWI	ACGGA	1 cut(s)	614
TspRI	CASTG	2 cut(s)	410, 506
VpaK11BI	GGWCC	2 cut(s)	650, 683
XapI	RAATTY	1 cut(s)	667
XbaI	TCTAGA	1 cut(s)	253
XceI	RCATGY	3 cut(s)	246, 270, 320
XmaJI	CCTAGG	1 cut(s)	229
XmiI	GTMKAC	1 cut(s)	607
XspI	CTAG	3 cut(s)	108, 230, 254

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.