Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0008155

Physical Location & Seq

Genomic Coordinates Reverse (-)

29250089 .. 29255569

Gene Structure 5481 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G308300.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1134 bp

ATGATCATGACAAACTTTGCAAGGCTGAACCAGGCAATGGGACTCCAAAGATCATCAGCTTCTAGTAAGCAGAAGGTGCAACCCATCGCAGAAGTATTAATTAAGAACGACGAGAACAGTGGTGATCTTTCCTTAGCATCGATCACCTCAGACCTGCATGATATTTCTAACCCTAATAAACCTATCCCCTCAGATTTAGCTTATAATTCATGGGTGGTCGAGCACCCTTCTGCATTAGGCTCATTTGATCGGATGATGAAAGCAGCAAAAGGGAAGAGGATTGTTGTCTTTCTAGACTACGATGGGACCCTTTCACCAATTGTTGATGATCCTGATCGTGCTTTCATGTCTGACGAGATGCGTGCAGCGGTACGGGAAGTTGCCAAGTATTTTCCAACAGCAGTGATCAGTGGAAGGAGTCGAGATAAGGTTAAAGAATTTGTACAGTTAAGTAATGTATATTACGCTGGCAGCCATGGGATGGACATAATGGTCCCTCCAAGGCCACTAAGGCCCTGTGATGCCAACAACCACACCACTGCCATGGATATAAAGGGCAGTGACGTTCTCTTTCAACCTGCTAAAAGATTTCTTCCTGCAATCCAAGAGATAAGAACACAGTTGGAGGAAATAACCAGAAAAGTAGAGGGTGCAAGGGTAGAGGACAATAGATTCTGTATCTCTGTACATTTTCGCAAGGTCCGGGAAGAGGATTATGGGATATTAGAAGAGAAGGTGAAGTCTGTTGTTGGAAAGTATCCGGAATTTCACCTGACGTTGGGTAAAAAGGTGTTGGAAATACGACCATCCATAGAATGGAACAAAGGTCATGCGCTAGAATATTTGCTTGACACTCTAGGCTTCAGCAATTCCAGCGATGTCCTCCCATTGTACATCGGGGACGATCGAACTGATGAAGATGCTTTCAAGGTGATACGAAGTAGAGGACAAGGGTTTCCAATAATTGTGTCTTCAACCCCAAAGGAGGACACCAAAGCTTGTTATTCTTTGCATGACCCATCGGAAGTATTAACTTTCTTGTTAAGGCTCGCCCGGTGGAGAAAAGCCTCTTCTTCAAGCAGGTCACTCGCTCAAATTTGGGGTGTTGGTAGTAACTTACCTAGATCAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Trehalose_PPase

Protein Analysis

378

Amino Acids

42.29

Weight (kDa)

8.27

Isoelectric Point (pI)

40.32

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008155)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g31160 FvH4_7g31160 FvH4_7g31160 FvH4_7g31160 FvH4_7g31160
malus_domestica	MD01G1216200.v1.1 MD07G1286100.v1.1
prunus_persica	Prupe.2G308300_v2.0.a1 Prupe.2G308300_v2.0.a1 Prupe.2G308300_v2.0.a1 Prupe.2G308300_v2.0.a1
pyrus_communis	pycom01g22700 pycom07g25940
rosa_chinensis	RchiOBHm_Chr1g0380201
rosa_laevigata	RLG00000026320
rosa_multiflora	Rmu_sc0001232.1_g000023
rosa_roxburghii	Rroxscaffold_4G00279570
rosa_rugosa	Rorug01G0418900
rosa_samantha	Rh1AG443800 Rh1BG398800 Rh1CG412200 Rh1DG429400
rosa_wichuraiana	Rw1G038540 Rw1G038610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	204
AasI	GACNNNNNNGTC	1 cut(s)	491
Acc36I	ACCTGC	3 cut(s)	162, 586, 1071
AccB7I	CCANNNNNTGG	3 cut(s)	37, 481, 816
AccIII	TCCGGA	1 cut(s)	760
AciI	CCGC	1 cut(s)	368
AclWI	GGATC	1 cut(s)	323
AcsI	RAATTY	3 cut(s)	437, 764, 1095
AcuI	CTGAAG	1 cut(s)	847
AfaI	GTAC	4 cut(s)	372, 444, 687, 893
AfiI	CCNNNNNNNGG	6 cut(s)	37, 481, 709, 778, 816, 985
AgsI	TTSAA	4 cut(s)	575, 928, 975, 1077
AjnI	CCWGG	1 cut(s)	30
AluBI	AGCT	3 cut(s)	59, 200, 998
AluI	AGCT	3 cut(s)	59, 200, 998
Alw21I	GWGCWC	1 cut(s)	225
AlwI	GGATC	1 cut(s)	323
Aor13HI	TCCGGA	1 cut(s)	760
AoxI	GGCC	2 cut(s)	503, 512
ApeKI	GCWGC	3 cut(s)	263, 365, 471
ApoI	RAATTY	3 cut(s)	437, 764, 1095
AseI	ATTAAT	1 cut(s)	98
AspLEI	GCGC	1 cut(s)	835
AspS9I	GGNCC	4 cut(s)	306, 493, 513, 700
AsuC2I	CCSGG	2 cut(s)	704, 1054
AsuHPI	GGTGA	6 cut(s)	134, 136, 306, 748, 761, 943
AvaII	GGWCC	3 cut(s)	306, 493, 700
BbsI	GAAGAC	1 cut(s)	963
Bbv12I	GWGCWC	1 cut(s)	225
BbvI	GCAGC	3 cut(s)	275, 377, 483
BccI	CCATC	5 cut(s)	92, 296, 475, 814, 1027
BcgI	CGANNNNNNTGC	4 cut(s)	344, 378, 1069, 1103
BciT130I	CCWGG	1 cut(s)	32
BciVI	GTATCC	1 cut(s)	768
BclI	TGATCA	2 cut(s)	3, 405
BcnI	CCSGG	2 cut(s)	704, 1054
BfaI	CTAG	5 cut(s)	63, 293, 836, 857, 1122
BfuAI	ACCTGC	3 cut(s)	162, 586, 1071
BfuI	GTATCC	1 cut(s)	768
BglI	GCCNNNNNGGC	1 cut(s)	511
BisI	GCNGC	3 cut(s)	264, 366, 472
BlsI	GCNGC	3 cut(s)	265, 367, 473
Bme1390I	CCNGG	3 cut(s)	32, 704, 1054
Bme18I	GGWCC	3 cut(s)	306, 493, 700
BmgT120I	GGNCC	4 cut(s)	306, 493, 513, 700
BmiI	GGNNCC	3 cut(s)	307, 308, 495
BmrFI	CCNGG	3 cut(s)	32, 704, 1054
BmsI	GCATC	4 cut(s)	146, 348, 511, 910
BpiI	GAAGAC	1 cut(s)	963
Bpu10I	CCTNAGC	1 cut(s)	133
BpuMI	CCSGG	2 cut(s)	704, 1054
Bsa29I	ATCGAT	1 cut(s)	140
BsaBI	GATNNNNATC	1 cut(s)	333
BsaJI	CCNNGG	3 cut(s)	475, 500, 543
BsaWI	WCCGGW	1 cut(s)	760
Bsc4I	CCNNNNNNNGG	6 cut(s)	37, 481, 709, 778, 816, 985
Bse3DI	GCAATG	1 cut(s)	42
Bse8I	GATNNNNATC	1 cut(s)	333
BseAI	TCCGGA	1 cut(s)	760
BseBI	CCWGG	1 cut(s)	32
BseCI	ATCGAT	1 cut(s)	140
BseDI	CCNNGG	3 cut(s)	475, 500, 543
BseGI	GGATG	3 cut(s)	258, 486, 806
BseJI	GATNNNNATC	1 cut(s)	333
BseLI	CCNNNNNNNGG	6 cut(s)	37, 481, 709, 778, 816, 985
BseMI	GCAATG	1 cut(s)	42
BseMII	CTCAG	2 cut(s)	162, 204
BseXI	GCAGC	3 cut(s)	275, 377, 483
BsgI	GTGCAG	1 cut(s)	384
Bsh1285I	CGRYCG	1 cut(s)	907
BshFI	GGCC	2 cut(s)	505, 514
BshVI	ATCGAT	1 cut(s)	140
BsiEI	CGRYCG	1 cut(s)	907
BsiHKAI	GWGCWC	1 cut(s)	225
BsiSI	CCGG	3 cut(s)	703, 761, 1054
BslFI	GGGAC	4 cut(s)	54, 319, 479, 914
BslI	CCNNNNNNNGG	6 cut(s)	37, 481, 709, 778, 816, 985
BsmFI	GGGAC	4 cut(s)	54, 319, 479, 914
BsnI	GGCC	2 cut(s)	505, 514
Bsp1286I	GDGCHC	1 cut(s)	225
Bsp13I	TCCGGA	1 cut(s)	760
Bsp1407I	TGTACA	3 cut(s)	442, 685, 891
Bsp19I	CCATGG	2 cut(s)	475, 543
BspACI	CCGC	1 cut(s)	368
BspANI	GGCC	2 cut(s)	505, 514
BspCNI	CTCAG	2 cut(s)	161, 203
BspDI	ATCGAT	1 cut(s)	140
BspEI	TCCGGA	1 cut(s)	760
BspHI	TCATGA	1 cut(s)	6
BspLI	GGNNCC	3 cut(s)	307, 308, 495
BspMI	ACCTGC	3 cut(s)	162, 586, 1071
BspPI	GGATC	1 cut(s)	323
BsrDI	GCAATG	1 cut(s)	42
BsrGI	TGTACA	3 cut(s)	442, 685, 891
BssECI	CCNNGG	3 cut(s)	475, 500, 543
BssT1I	CCWWGG	3 cut(s)	475, 500, 543
Bst2UI	CCWGG	1 cut(s)	32
Bst4CI	ACNGT	3 cut(s)	119, 447, 621
Bst6I	CTCTTC	4 cut(s)	269, 702, 723, 1075
BstAPI	GCANNNNNTGC	1 cut(s)	76
BstAUI	TGTACA	3 cut(s)	442, 685, 891
BstC8I	GCNNGC	3 cut(s)	363, 469, 1050
BstDEI	CTNAG	4 cut(s)	133, 148, 190, 509
BstDSI	CCRYGG	2 cut(s)	475, 543
BstF5I	GGATG	3 cut(s)	258, 486, 806
BstHHI	GCGC	1 cut(s)	835
BstMCI	CGRYCG	1 cut(s)	907
BstMWI	GCNNNNNNNGC	3 cut(s)	76, 511, 873
BstNI	CCWGG	1 cut(s)	32
BstSCI	CCNGG	3 cut(s)	30, 702, 1052
BstV1I	GCAGC	3 cut(s)	275, 377, 483
BstV2I	GAAGAC	1 cut(s)	963
BstXI	CCANNNNNNTGG	1 cut(s)	544
Bsu15I	ATCGAT	1 cut(s)	140
BsuI	GTATCC	1 cut(s)	768
BsuRI	GGCC	2 cut(s)	505, 514
BsuTUI	ATCGAT	1 cut(s)	140
BtgI	CCRYGG	2 cut(s)	475, 543
BtgZI	GCGATG	2 cut(s)	70, 891
BtsCI	GGATG	3 cut(s)	258, 486, 806
BtsI	GCAGTG	3 cut(s)	408, 537, 565
BtsIMutI	CAGTG	5 cut(s)	124, 408, 415, 537, 565
BveI	ACCTGC	3 cut(s)	162, 586, 1071
Cac8I	GCNNGC	3 cut(s)	363, 469, 1050
CciI	TCATGA	1 cut(s)	6
CfoI	GCGC	1 cut(s)	835
Cfr13I	GGNCC	4 cut(s)	306, 493, 513, 700
ClaI	ATCGAT	1 cut(s)	140
Csp6I	GTAC	4 cut(s)	371, 443, 686, 892
CviAII	CATG	8 cut(s)	7, 158, 210, 346, 476, 544, 830, 1013
CviQI	GTAC	4 cut(s)	371, 443, 686, 892
DdeI	CTNAG	4 cut(s)	133, 148, 190, 509
DrdI	GACNNNNNNGTC	1 cut(s)	491
DseDI	GACNNNNNNGTC	1 cut(s)	491
Eam1104I	CTCTTC	4 cut(s)	269, 702, 723, 1075
EarI	CTCTTC	4 cut(s)	269, 702, 723, 1075
Eco130I	CCWWGG	3 cut(s)	475, 500, 543
Eco47I	GGWCC	3 cut(s)	306, 493, 700
Eco57I	CTGAAG	1 cut(s)	847
EcoO109I	RGGNCCY	2 cut(s)	306, 513
EcoRII	CCWGG	1 cut(s)	30
EcoT14I	CCWWGG	3 cut(s)	475, 500, 543
ErhI	CCWWGG	3 cut(s)	475, 500, 543
FaeI	CATG	8 cut(s)	10, 161, 213, 349, 479, 547, 833, 1016
FaqI	GGGAC	4 cut(s)	54, 319, 479, 914
FatI	CATG	8 cut(s)	6, 157, 209, 345, 475, 543, 829, 1012
FbaI	TGATCA	2 cut(s)	3, 405
Fnu4HI	GCNGC	3 cut(s)	264, 366, 472
FokI	GGATG	3 cut(s)	265, 493, 793
Fsp4HI	GCNGC	3 cut(s)	264, 366, 472
FspBI	CTAG	5 cut(s)	63, 293, 836, 857, 1122
GlaI	GCGC	1 cut(s)	834
GluI	GCNGC	3 cut(s)	264, 366, 472
HaeIII	GGCC	2 cut(s)	505, 514
HapII	CCGG	3 cut(s)	703, 761, 1054
HhaI	GCGC	1 cut(s)	835
Hin1II	CATG	8 cut(s)	10, 161, 213, 349, 479, 547, 833, 1016
Hin6I	GCGC	1 cut(s)	833
HinP1I	GCGC	1 cut(s)	833
HindIII	AAGCTT	1 cut(s)	996
HinfI	GANTC	3 cut(s)	42, 418, 672
HpaII	CCGG	3 cut(s)	703, 761, 1054
HphI	GGTGA	6 cut(s)	134, 136, 306, 748, 761, 943
Hpy188I	TCNGA	5 cut(s)	151, 193, 252, 352, 1024
Hpy188III	TCNNGA	5 cut(s)	7, 293, 332, 422, 761
Hpy99I	CGWCG	1 cut(s)	113
HpyAV	CCTTC	4 cut(s)	67, 237, 408, 727
HpyCH4III	ACNGT	3 cut(s)	119, 447, 621
HpyCH4IV	ACGT	2 cut(s)	564, 776
HpyCH4V	TGCA	8 cut(s)	20, 79, 157, 233, 365, 599, 653, 1012
HpyF10VI	GCNNNNNNNGC	3 cut(s)	76, 511, 873
HpyF3I	CTNAG	4 cut(s)	133, 148, 190, 509
HpySE526I	ACGT	2 cut(s)	564, 776
Hsp92II	CATG	8 cut(s)	10, 161, 213, 349, 479, 547, 833, 1016
HspAI	GCGC	1 cut(s)	833
KflI	GGGWCCC	1 cut(s)	306
Kpn2I	TCCGGA	1 cut(s)	760
Ksp22I	TGATCA	2 cut(s)	3, 405
Lsp1109I	GCAGC	3 cut(s)	275, 377, 483
LweI	GCATC	4 cut(s)	146, 348, 511, 910
MaeI	CTAG	5 cut(s)	63, 293, 836, 857, 1122
MaeII	ACGT	2 cut(s)	564, 776
MaeIII	GTNAC	3 cut(s)	560, 1083, 1112
MboII	GAAGA	8 cut(s)	286, 584, 719, 740, 929, 963, 1062, 1065
MfeI	CAATTG	1 cut(s)	318
MhlI	GDGCHC	1 cut(s)	225
MluCI	AATT	8 cut(s)	99, 205, 318, 437, 764, 868, 963, 1095
MlyI	GAGTC	2 cut(s)	36, 427
MmeI	TCCRAC	4 cut(s)	419, 603, 730, 774
MroI	TCCGGA	1 cut(s)	760
MseI	TTAA	6 cut(s)	98, 102, 432, 449, 1031, 1043
MslI	CAYNNNNRTG	1 cut(s)	542
MspA1I	CMGCKG	1 cut(s)	368
MspI	CCGG	3 cut(s)	703, 761, 1054
MspR9I	CCNGG	3 cut(s)	32, 704, 1054
MunI	CAATTG	1 cut(s)	318
MvaI	CCWGG	1 cut(s)	32
MwoI	GCNNNNNNNGC	3 cut(s)	76, 511, 873
NciI	CCSGG	2 cut(s)	704, 1054
NcoI	CCATGG	2 cut(s)	475, 543
NlaIII	CATG	8 cut(s)	10, 161, 213, 349, 479, 547, 833, 1016
NlaIV	GGNNCC	3 cut(s)	307, 308, 495
NmuCI	GTSAC	2 cut(s)	560, 1083
PacI	TTAATTAA	1 cut(s)	102
PagI	TCATGA	1 cut(s)	6
PfeI	GAWTC	1 cut(s)	672
PflMI	CCANNNNNTGG	3 cut(s)	37, 481, 816
PfoI	TCCNGGA	1 cut(s)	702
PkrI	GCNGC	3 cut(s)	265, 367, 473
Ple19I	CGATCG	1 cut(s)	907
PleI	GAGTC	2 cut(s)	36, 426
PpsI	GAGTC	2 cut(s)	36, 426
PpuMI	RGGWCCY	1 cut(s)	306
PshBI	ATTAAT	1 cut(s)	98
PsiI	TTATAA	1 cut(s)	204
Psp5II	RGGWCCY	1 cut(s)	306
Psp6I	CCWGG	1 cut(s)	30
PspGI	CCWGG	1 cut(s)	30
PspN4I	GGNNCC	3 cut(s)	307, 308, 495
PspPI	GGNCC	4 cut(s)	306, 493, 513, 700
PspPPI	RGGWCCY	1 cut(s)	306
PvuI	CGATCG	1 cut(s)	907
RsaI	GTAC	4 cut(s)	372, 444, 687, 893
RsaNI	GTAC	4 cut(s)	371, 443, 686, 892
RseI	CAYNNNNRTG	1 cut(s)	542
SaqAI	TTAA	6 cut(s)	98, 102, 432, 449, 1031, 1043
SatI	GCNGC	3 cut(s)	264, 366, 472
Sau96I	GGNCC	4 cut(s)	306, 493, 513, 700
SchI	GAGTC	2 cut(s)	36, 427
ScrFI	CCNGG	3 cut(s)	32, 704, 1054
SduI	GDGCHC	1 cut(s)	225
SfaNI	GCATC	4 cut(s)	146, 348, 511, 910
SfiI	GGCCNNNNNGGCC	1 cut(s)	511
SinI	GGWCC	3 cut(s)	306, 493, 700
SmiMI	CAYNNNNRTG	1 cut(s)	542
Sse9I	AATT	8 cut(s)	99, 205, 318, 437, 764, 868, 963, 1095
SsiI	CCGC	1 cut(s)	368
SspI	AATATT	1 cut(s)	842
SspMI	CTAG	5 cut(s)	63, 293, 836, 857, 1122
StyD4I	CCNGG	3 cut(s)	30, 702, 1052
StyI	CCWWGG	3 cut(s)	475, 500, 543
TaaI	ACNGT	3 cut(s)	119, 447, 621
TaiI	ACGT	2 cut(s)	567, 779
TaqI	TCGA	4 cut(s)	140, 219, 421, 907
TasI	AATT	8 cut(s)	99, 205, 318, 437, 764, 868, 963, 1095
TatI	WGTACW	3 cut(s)	442, 685, 891
TfiI	GAWTC	1 cut(s)	672
Tru1I	TTAA	6 cut(s)	98, 102, 432, 449, 1031, 1043
Tru9I	TTAA	6 cut(s)	98, 102, 432, 449, 1031, 1043
TscAI	CASTG	5 cut(s)	124, 408, 415, 544, 565
TseFI	GTSAC	2 cut(s)	560, 1083
TseI	GCWGC	3 cut(s)	263, 365, 471
Tsp45I	GTSAC	2 cut(s)	560, 1083
TspDTI	ATGAA	4 cut(s)	198, 272, 334, 930
TspRI	CASTG	5 cut(s)	124, 408, 415, 544, 565
Van91I	CCANNNNNTGG	3 cut(s)	37, 481, 816
VpaK11BI	GGWCC	3 cut(s)	306, 493, 700
VspI	ATTAAT	1 cut(s)	98
XapI	RAATTY	3 cut(s)	437, 764, 1095
XbaI	TCTAGA	1 cut(s)	292
XcmI	CCANNNNNNNNNTGG	1 cut(s)	813
XspI	CTAG	5 cut(s)	63, 293, 836, 857, 1122

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.