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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G53440 AT5G53440 |
| fragaria_vesca | FvH4_7g31740 FvH4_7g31740 FvH4_7g31740 |
| malus_domestica | MD01G1219900.v1.1 MD07G1290200.v1.1 |
| prunus_persica | Prupe.2G311300_v2.0.a1 Prupe.2G311300_v2.0.a1 Prupe.2G311300_v2.0.a1 |
| pyrus_communis | pycom01g22970 pycom01g22980 pycom07g26280 |
| rosa_chinensis | RchiOBHm_Chr1g0380961 |
| rosa_laevigata | RLG00000026256 |
| rosa_multiflora | Rmu_sc0002962.1_g000023 Rmu_sc0031952.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00278900 |
| rosa_rugosa | Rorug01G0425800 Rorug01G0425900 |
| rosa_samantha | Rh1AG449900 Rh1BG405700 Rh1CG419700 Rh1DG436200 |
| rosa_wichuraiana | Rw1G039190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 3 cut(s) | 607, 2630, 3508 |
| AccB1I | GGYRCC | 3 cut(s) | 2188, 2438, 2471 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2282 |
| AccBSI | CCGCTC | 1 cut(s) | 1174 |
| AccI | GTMKAC | 1 cut(s) | 2741 |
| AccII | CGCG | 4 cut(s) | 1038, 1074, 1188, 1260 |
| AclI | AACGTT | 1 cut(s) | 2927 |
| AcoI | YGGCCR | 2 cut(s) | 1720, 2366 |
| AcsI | RAATTY | 3 cut(s) | 713, 3034, 3124 |
| AcuI | CTGAAG | 3 cut(s) | 983, 1004, 3558 |
| AfaI | GTAC | 9 cut(s) | 59, 389, 418, 1406, 1565, 1685, 1823, 2544, 3709 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 207, 1643, 1729, 2043, 2237, 2282, 3506, 3569 |
| AflIII | ACRYGT | 1 cut(s) | 2460 |
| AhlI | ACTAGT | 1 cut(s) | 419 |
| AjnI | CCWGG | 3 cut(s) | 50, 2667, 3318 |
| AleI | CACNNNNGTG | 1 cut(s) | 2374 |
| Alw21I | GWGCWC | 1 cut(s) | 2230 |
| Alw26I | GTCTC | 3 cut(s) | 682, 1658, 2447 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1499 |
| Ama87I | CYCGRG | 2 cut(s) | 665, 3296 |
| AoxI | GGCC | 6 cut(s) | 1720, 1776, 2046, 2366, 2607, 3624 |
| ApeKI | GCWGC | 4 cut(s) | 927, 1308, 1509, 3503 |
| ApoI | RAATTY | 3 cut(s) | 713, 3034, 3124 |
| AseI | ATTAAT | 1 cut(s) | 3555 |
| AsiSI | GCGATCGC | 1 cut(s) | 1042 |
| AspLEI | GCGC | 2 cut(s) | 246, 1014 |
| AsuC2I | CCSGG | 3 cut(s) | 1277, 1352, 2579 |
| AsuII | TTCGAA | 1 cut(s) | 487 |
| AvaI | CYCGRG | 2 cut(s) | 665, 3296 |
| AvaII | GGWCC | 8 cut(s) | 1051, 1183, 1524, 1620, 2402, 2706, 2963, 3593 |
| BalI | TGGCCA | 1 cut(s) | 1722 |
| BamHI | GGATCC | 2 cut(s) | 1600, 3614 |
| BanI | GGYRCC | 3 cut(s) | 2188, 2438, 2471 |
| BauI | CACGAG | 2 cut(s) | 1312, 2508 |
| BbsI | GAAGAC | 1 cut(s) | 756 |
| Bbv12I | GWGCWC | 1 cut(s) | 2230 |
| BbvCI | CCTCAGC | 1 cut(s) | 3258 |
| BbvI | GCAGC | 4 cut(s) | 939, 1320, 1521, 3490 |
| BceAI | ACGGC | 1 cut(s) | 2202 |
| BciT130I | CCWGG | 3 cut(s) | 52, 2669, 3320 |
| BciVI | GTATCC | 2 cut(s) | 2881, 3681 |
| BclI | TGATCA | 1 cut(s) | 298 |
| BcnI | CCSGG | 3 cut(s) | 1277, 1352, 2579 |
| BcoDI | GTCTC | 3 cut(s) | 682, 1658, 2447 |
| BcuI | ACTAGT | 1 cut(s) | 419 |
| BfaI | CTAG | 5 cut(s) | 420, 737, 777, 924, 1386 |
| BfuAI | ACCTGC | 3 cut(s) | 607, 2630, 3508 |
| BfuI | GTATCC | 2 cut(s) | 2881, 3681 |
| BglII | AGATCT | 2 cut(s) | 1469, 1790 |
| BisI | GCNGC | 9 cut(s) | 242, 289, 928, 1309, 1510, 1608, 2366, 3504, 3576 |
| BlsI | GCNGC | 9 cut(s) | 243, 290, 929, 1310, 1511, 1609, 2367, 3505, 3577 |
| BmcAI | AGTACT | 2 cut(s) | 59, 418 |
| Bme1390I | CCNGG | 6 cut(s) | 52, 1277, 1352, 2579, 2669, 3320 |
| Bme18I | GGWCC | 8 cut(s) | 1051, 1183, 1524, 1620, 2402, 2706, 2963, 3593 |
| BmeT110I | CYCGRG | 2 cut(s) | 665, 3296 |
| BmrFI | CCNGG | 6 cut(s) | 52, 1277, 1352, 2579, 2669, 3320 |
| BmrI | ACTGGG | 2 cut(s) | 1527, 3285 |
| BmuI | ACTGGG | 2 cut(s) | 1527, 3285 |
| BpiI | GAAGAC | 1 cut(s) | 756 |
| BpmI | CTGGAG | 2 cut(s) | 1680, 3116 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2856, 3258 |
| Bpu14I | TTCGAA | 1 cut(s) | 487 |
| BpuEI | CTTGAG | 1 cut(s) | 25 |
| BpuMI | CCSGG | 3 cut(s) | 1277, 1352, 2579 |
| Bsa29I | ATCGAT | 1 cut(s) | 3464 |
| BsaI | GGTCTC | 1 cut(s) | 1658 |
| BsaJI | CCNNGG | 9 cut(s) | 5, 51, 1350, 1692, 1917, 2577, 3297, 3564, 3627 |
| BsaWI | WCCGGW | 2 cut(s) | 200, 3268 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 207, 1643, 1729, 2043, 2237, 2282, 3506, 3569 |
| Bse118I | RCCGGY | 1 cut(s) | 3424 |
| Bse3DI | GCAATG | 1 cut(s) | 3373 |
| BseBI | CCWGG | 3 cut(s) | 52, 2669, 3320 |
| BseCI | ATCGAT | 1 cut(s) | 3464 |
| BseDI | CCNNGG | 9 cut(s) | 5, 51, 1350, 1692, 1917, 2577, 3297, 3564, 3627 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 207, 1643, 1729, 2043, 2237, 2282, 3506, 3569 |
| BseMI | GCAATG | 1 cut(s) | 3373 |
| BseMII | CTCAG | 8 cut(s) | 210, 564, 1487, 2273, 2597, 2847, 3249, 3411 |
| BseRI | GAGGAG | 4 cut(s) | 22, 2712, 3179, 3406 |
| BseXI | GCAGC | 4 cut(s) | 939, 1320, 1521, 3490 |
| BseYI | CCCAGC | 1 cut(s) | 2630 |
| BsgI | GTGCAG | 2 cut(s) | 2624, 3323 |
| Bsh1236I | CGCG | 4 cut(s) | 1038, 1074, 1188, 1260 |
| Bsh1285I | CGRYCG | 4 cut(s) | 1042, 1078, 1150, 1264 |
| BshFI | GGCC | 6 cut(s) | 1722, 1778, 2048, 2368, 2609, 3626 |
| BshNI | GGYRCC | 3 cut(s) | 2188, 2438, 2471 |
| BshVI | ATCGAT | 1 cut(s) | 3464 |
| BsiEI | CGRYCG | 4 cut(s) | 1042, 1078, 1150, 1264 |
| BsiHKAI | GWGCWC | 1 cut(s) | 2230 |
| BsiHKCI | CYCGRG | 2 cut(s) | 665, 3296 |
| BsiSI | CCGG | 7 cut(s) | 201, 1276, 1352, 2049, 2579, 3269, 3425 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 207, 1643, 1729, 2043, 2237, 2282, 3506, 3569 |
| BsmAI | GTCTC | 3 cut(s) | 682, 1658, 2447 |
| BsmBI | CGTCTC | 1 cut(s) | 682 |
| BsmI | GAATGC | 1 cut(s) | 2509 |
| BsnI | GGCC | 6 cut(s) | 1722, 1778, 2048, 2368, 2609, 3626 |
| Bso31I | GGTCTC | 1 cut(s) | 1658 |
| BsoBI | CYCGRG | 2 cut(s) | 665, 3296 |
| Bsp119I | TTCGAA | 1 cut(s) | 487 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2230 |
| Bsp19I | CCATGG | 1 cut(s) | 1692 |
| Bsp68I | TCGCGA | 2 cut(s) | 1038, 1260 |
| BspANI | GGCC | 6 cut(s) | 1722, 1778, 2048, 2368, 2609, 3626 |
| BspCNI | CTCAG | 8 cut(s) | 211, 565, 1486, 2272, 2596, 2848, 3250, 3412 |
| BspDI | ATCGAT | 1 cut(s) | 3464 |
| BspFNI | CGCG | 4 cut(s) | 1038, 1074, 1188, 1260 |
| BspHI | TCATGA | 3 cut(s) | 1204, 2752, 3181 |
| BspMI | ACCTGC | 3 cut(s) | 607, 2630, 3508 |
| BspQI | GCTCTTC | 1 cut(s) | 92 |
| BspT104I | TTCGAA | 1 cut(s) | 487 |
| BspT107I | GGYRCC | 3 cut(s) | 2188, 2438, 2471 |
| BspTNI | GGTCTC | 1 cut(s) | 1658 |
| BsrBI | CCGCTC | 1 cut(s) | 1174 |
| BsrDI | GCAATG | 1 cut(s) | 3373 |
| BsrFI | RCCGGY | 1 cut(s) | 3424 |
| BssAI | RCCGGY | 1 cut(s) | 3424 |
| BssECI | CCNNGG | 9 cut(s) | 5, 51, 1350, 1692, 1917, 2577, 3297, 3564, 3627 |
| BssSI | CACGAG | 2 cut(s) | 1312, 2508 |
| BssT1I | CCWWGG | 3 cut(s) | 1692, 3564, 3627 |
| Bst2BI | CACGAG | 2 cut(s) | 1312, 2508 |
| Bst2UI | CCWGG | 3 cut(s) | 52, 2669, 3320 |
| Bst6I | CTCTTC | 4 cut(s) | 92, 102, 407, 980 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2846 |
| BstBI | TTCGAA | 1 cut(s) | 487 |
| BstC8I | GCNNGC | 8 cut(s) | 803, 1072, 1190, 1485, 1977, 2607, 2637, 3071 |
| BstDSI | CCRYGG | 1 cut(s) | 1692 |
| BstFNI | CGCG | 4 cut(s) | 1038, 1074, 1188, 1260 |
| BstHHI | GCGC | 2 cut(s) | 246, 1014 |
| BstMAI | GTCTC | 3 cut(s) | 682, 1658, 2447 |
| BstMCI | CGRYCG | 4 cut(s) | 1042, 1078, 1150, 1264 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 798, 2636, 2846, 3581, 3638 |
| BstNI | CCWGG | 3 cut(s) | 52, 2669, 3320 |
| BstNSI | RCATGY | 1 cut(s) | 2464 |
| BstSCI | CCNGG | 6 cut(s) | 50, 1275, 1350, 2577, 2667, 3318 |
| BstUI | CGCG | 4 cut(s) | 1038, 1074, 1188, 1260 |
| BstV1I | GCAGC | 4 cut(s) | 939, 1320, 1521, 3490 |
| BstV2I | GAAGAC | 1 cut(s) | 756 |
| BstX2I | RGATCY | 9 cut(s) | 989, 1346, 1469, 1600, 1646, 1688, 1790, 3110, 3614 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1711, 2376 |
| BstYI | RGATCY | 9 cut(s) | 989, 1346, 1469, 1600, 1646, 1688, 1790, 3110, 3614 |
| Bsu15I | ATCGAT | 1 cut(s) | 3464 |
| BsuI | GTATCC | 2 cut(s) | 2881, 3681 |
| BsuRI | GGCC | 6 cut(s) | 1722, 1778, 2048, 2368, 2609, 3626 |
| BsuTUI | ATCGAT | 1 cut(s) | 3464 |
| BtgI | CCRYGG | 1 cut(s) | 1692 |
| BtgZI | GCGATG | 3 cut(s) | 606, 1956, 2802 |
| BtsI | GCAGTG | 2 cut(s) | 1888, 3237 |
| BtsIMutI | CAGTG | 9 cut(s) | 147, 592, 1497, 1888, 2876, 2904, 3092, 3206, 3237 |
| BtuMI | TCGCGA | 2 cut(s) | 1038, 1260 |
| BveI | ACCTGC | 3 cut(s) | 607, 2630, 3508 |
| Cac8I | GCNNGC | 8 cut(s) | 803, 1072, 1190, 1485, 1977, 2607, 2637, 3071 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1499 |
| CciI | TCATGA | 3 cut(s) | 1204, 2752, 3181 |
| CfoI | GCGC | 2 cut(s) | 246, 1014 |
| Cfr10I | RCCGGY | 1 cut(s) | 3424 |
| ClaI | ATCGAT | 1 cut(s) | 3464 |
| Csp6I | GTAC | 9 cut(s) | 58, 388, 417, 1405, 1564, 1684, 1822, 2543, 3708 |
| CviQI | GTAC | 9 cut(s) | 58, 388, 417, 1405, 1564, 1684, 1822, 2543, 3708 |
| DraI | TTTAAA | 1 cut(s) | 3393 |
| EaeI | YGGCCR | 2 cut(s) | 1720, 2366 |
| Eam1104I | CTCTTC | 4 cut(s) | 92, 102, 407, 980 |
| EarI | CTCTTC | 4 cut(s) | 92, 102, 407, 980 |
| Eco130I | CCWWGG | 3 cut(s) | 1692, 3564, 3627 |
| Eco31I | GGTCTC | 1 cut(s) | 1658 |
| Eco32I | GATATC | 2 cut(s) | 2649, 3313 |
| Eco47I | GGWCC | 8 cut(s) | 1051, 1183, 1524, 1620, 2402, 2706, 2963, 3593 |
| Eco57I | CTGAAG | 3 cut(s) | 983, 1004, 3558 |
| Eco88I | CYCGRG | 2 cut(s) | 665, 3296 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1524, 2402, 2608 |
| EcoRII | CCWGG | 3 cut(s) | 50, 2667, 3318 |
| EcoRV | GATATC | 2 cut(s) | 2649, 3313 |
| EcoT14I | CCWWGG | 3 cut(s) | 1692, 3564, 3627 |
| EcoT22I | ATGCAT | 2 cut(s) | 2164, 2214 |
| ErhI | CCWWGG | 3 cut(s) | 1692, 3564, 3627 |
| Esp3I | CGTCTC | 1 cut(s) | 682 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1780, 1812, 1870, 1902 |
| FauI | CCCGC | 3 cut(s) | 616, 1079, 1167 |
| FauNDI | CATATG | 1 cut(s) | 681 |
| FbaI | TGATCA | 1 cut(s) | 298 |
| FblI | GTMKAC | 1 cut(s) | 2741 |
| Fnu4HI | GCNGC | 9 cut(s) | 242, 289, 928, 1309, 1510, 1608, 2366, 3504, 3576 |
| Fsp4HI | GCNGC | 9 cut(s) | 242, 289, 928, 1309, 1510, 1608, 2366, 3504, 3576 |
| FspBI | CTAG | 5 cut(s) | 420, 737, 777, 924, 1386 |
| GlaI | GCGC | 2 cut(s) | 245, 1013 |
| GluI | GCNGC | 9 cut(s) | 242, 289, 928, 1309, 1510, 1608, 2366, 3504, 3576 |
| GsaI | CCCAGC | 1 cut(s) | 2634 |
| GsuI | CTGGAG | 2 cut(s) | 1680, 3116 |
| HaeIII | GGCC | 6 cut(s) | 1722, 1778, 2048, 2368, 2609, 3626 |
| HapII | CCGG | 7 cut(s) | 201, 1276, 1352, 2049, 2579, 3269, 3425 |
| HhaI | GCGC | 2 cut(s) | 246, 1014 |
| Hin6I | GCGC | 2 cut(s) | 244, 1012 |
| HinP1I | GCGC | 2 cut(s) | 244, 1012 |
| HincII | GTYRAC | 2 cut(s) | 2056, 3285 |
| HindII | GTYRAC | 2 cut(s) | 2056, 3285 |
| HindIII | AAGCTT | 4 cut(s) | 161, 995, 1485, 2825 |
| HpaII | CCGG | 7 cut(s) | 201, 1276, 1352, 2049, 2579, 3269, 3425 |
| Hpy166II | GTNNAC | 9 cut(s) | 1100, 1106, 1232, 1824, 2056, 2742, 2931, 3285, 3710 |
| Hpy8I | GTNNAC | 9 cut(s) | 1100, 1106, 1232, 1824, 2056, 2742, 2931, 3285, 3710 |
| HpyCH4IV | ACGT | 4 cut(s) | 1102, 1234, 2113, 2927 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 798, 2636, 2846, 3581, 3638 |
| HpySE526I | ACGT | 4 cut(s) | 1102, 1234, 2113, 2927 |
| HspAI | GCGC | 2 cut(s) | 244, 1012 |
| Ksp22I | TGATCA | 1 cut(s) | 298 |
| LguI | GCTCTTC | 1 cut(s) | 92 |
| LmnI | GCTCC | 7 cut(s) | 149, 203, 512, 1732, 2225, 2275, 3208 |
| Lsp1109I | GCAGC | 4 cut(s) | 939, 1320, 1521, 3490 |
| MaeI | CTAG | 5 cut(s) | 420, 737, 777, 924, 1386 |
| MaeII | ACGT | 4 cut(s) | 1102, 1234, 2113, 2927 |
| MbiI | CCGCTC | 1 cut(s) | 1174 |
| MflI | RGATCY | 9 cut(s) | 989, 1346, 1469, 1600, 1646, 1688, 1790, 3110, 3614 |
| MhlI | GDGCHC | 1 cut(s) | 2230 |
| MlsI | TGGCCA | 1 cut(s) | 1722 |
| MluNI | TGGCCA | 1 cut(s) | 1722 |
| MmeI | TCCRAC | 4 cut(s) | 636, 1853, 3315, 3665 |
| Mox20I | TGGCCA | 1 cut(s) | 1722 |
| Mph1103I | ATGCAT | 2 cut(s) | 2164, 2214 |
| MscI | TGGCCA | 1 cut(s) | 1722 |
| Msp20I | TGGCCA | 1 cut(s) | 1722 |
| MspA1I | CMGCKG | 1 cut(s) | 1979 |
| MspI | CCGG | 7 cut(s) | 201, 1276, 1352, 2049, 2579, 3269, 3425 |
| MspR9I | CCNGG | 6 cut(s) | 52, 1277, 1352, 2579, 2669, 3320 |
| Mva1269I | GAATGC | 1 cut(s) | 2509 |
| MvaI | CCWGG | 3 cut(s) | 52, 2669, 3320 |
| MvnI | CGCG | 4 cut(s) | 1038, 1074, 1188, 1260 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 798, 2636, 2846, 3581, 3638 |
| NciI | CCSGG | 3 cut(s) | 1277, 1352, 2579 |
| NcoI | CCATGG | 1 cut(s) | 1692 |
| NdeI | CATATG | 1 cut(s) | 681 |
| NmeAIII | GCCGAG | 2 cut(s) | 30, 3455 |
| NmuCI | GTSAC | 8 cut(s) | 1055, 1079, 1127, 1133, 1235, 1290, 2760, 3235 |
| NruI | TCGCGA | 2 cut(s) | 1038, 1260 |
| NsiI | ATGCAT | 2 cut(s) | 2164, 2214 |
| NspI | RCATGY | 1 cut(s) | 2464 |
| NspV | TTCGAA | 1 cut(s) | 487 |
| OliI | CACNNNNGTG | 1 cut(s) | 2374 |
| PagI | TCATGA | 3 cut(s) | 1204, 2752, 3181 |
| PciI | ACATGT | 1 cut(s) | 2460 |
| PciSI | GCTCTTC | 1 cut(s) | 92 |
| PctI | GAATGC | 1 cut(s) | 2509 |
| PflFI | GACNNNGTC | 2 cut(s) | 1848, 1929 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2282 |
| PkrI | GCNGC | 9 cut(s) | 243, 290, 929, 1310, 1511, 1609, 2367, 3505, 3577 |
| Ple19I | CGATCG | 3 cut(s) | 1042, 1078, 1150 |
| PpuMI | RGGWCCY | 2 cut(s) | 1524, 2402 |
| PscI | ACATGT | 1 cut(s) | 2460 |
| PshBI | ATTAAT | 1 cut(s) | 3555 |
| Psp1406I | AACGTT | 1 cut(s) | 2927 |
| Psp5II | RGGWCCY | 2 cut(s) | 1524, 2402 |
| Psp6I | CCWGG | 3 cut(s) | 50, 2667, 3318 |
| PspFI | CCCAGC | 1 cut(s) | 2630 |
| PspGI | CCWGG | 3 cut(s) | 50, 2667, 3318 |
| PspPPI | RGGWCCY | 2 cut(s) | 1524, 2402 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1499 |
| PsuI | RGATCY | 9 cut(s) | 989, 1346, 1469, 1600, 1646, 1688, 1790, 3110, 3614 |
| PsyI | GACNNNGTC | 2 cut(s) | 1848, 1929 |
| PvuI | CGATCG | 3 cut(s) | 1042, 1078, 1150 |
| PvuII | CAGCTG | 1 cut(s) | 1979 |
| RgaI | GCGATCGC | 1 cut(s) | 1042 |
| RruI | TCGCGA | 2 cut(s) | 1038, 1260 |
| RsaI | GTAC | 9 cut(s) | 59, 389, 418, 1406, 1565, 1685, 1823, 2544, 3709 |
| RsaNI | GTAC | 9 cut(s) | 58, 388, 417, 1405, 1564, 1684, 1822, 2543, 3708 |
| SapI | GCTCTTC | 1 cut(s) | 92 |
| SatI | GCNGC | 9 cut(s) | 242, 289, 928, 1309, 1510, 1608, 2366, 3504, 3576 |
| ScaI | AGTACT | 2 cut(s) | 59, 418 |
| ScrFI | CCNGG | 6 cut(s) | 52, 1277, 1352, 2579, 2669, 3320 |
| SduI | GDGCHC | 1 cut(s) | 2230 |
| SfaAI | GCGATCGC | 1 cut(s) | 1042 |
| SfuI | TTCGAA | 1 cut(s) | 487 |
| SgfI | GCGATCGC | 1 cut(s) | 1042 |
| SinI | GGWCC | 8 cut(s) | 1051, 1183, 1524, 1620, 2402, 2706, 2963, 3593 |
| SmlI | CTYRAG | 1 cut(s) | 40 |
| SmoI | CTYRAG | 1 cut(s) | 40 |
| SpeI | ACTAGT | 1 cut(s) | 419 |
| SspI | AATATT | 1 cut(s) | 1810 |
| SspMI | CTAG | 5 cut(s) | 420, 737, 777, 924, 1386 |
| StyD4I | CCNGG | 6 cut(s) | 50, 1275, 1350, 2577, 2667, 3318 |
| StyI | CCWWGG | 3 cut(s) | 1692, 3564, 3627 |
| TaiI | ACGT | 4 cut(s) | 1105, 1237, 2116, 2930 |
| TatI | WGTACW | 6 cut(s) | 57, 416, 1563, 1683, 2542, 3707 |
| TauI | GCSGC | 5 cut(s) | 244, 291, 1610, 2368, 3578 |
| TscAI | CASTG | 9 cut(s) | 154, 592, 1504, 1888, 2876, 2911, 3099, 3213, 3244 |
| TseFI | GTSAC | 8 cut(s) | 1055, 1079, 1127, 1133, 1235, 1290, 2760, 3235 |
| TseI | GCWGC | 4 cut(s) | 927, 1308, 1509, 3503 |
| Tsp45I | GTSAC | 8 cut(s) | 1055, 1079, 1127, 1133, 1235, 1290, 2760, 3235 |
| TspGWI | ACGGA | 3 cut(s) | 279, 706, 1861 |
| TspRI | CASTG | 9 cut(s) | 154, 592, 1504, 1888, 2876, 2911, 3099, 3213, 3244 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1848, 1929 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2282 |
| VpaK11BI | GGWCC | 8 cut(s) | 1051, 1183, 1524, 1620, 2402, 2706, 2963, 3593 |
| VspI | ATTAAT | 1 cut(s) | 3555 |
| XapI | RAATTY | 3 cut(s) | 713, 3034, 3124 |
| XbaI | TCTAGA | 2 cut(s) | 736, 1385 |
| XceI | RCATGY | 1 cut(s) | 2464 |
| XmiI | GTMKAC | 1 cut(s) | 2741 |
| XspI | CTAG | 5 cut(s) | 420, 737, 777, 924, 1386 |
| ZrmI | AGTACT | 2 cut(s) | 59, 418 |
| Zsp2I | ATGCAT | 2 cut(s) | 2164, 2214 |