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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G53440 AT5G53440 |
| fragaria_vesca | FvH4_7g31740 FvH4_7g31740 FvH4_7g31740 |
| malus_domestica | MD01G1219900.v1.1 MD07G1290200.v1.1 |
| prunus_persica | Prupe.2G311300_v2.0.a1 Prupe.2G311300_v2.0.a1 Prupe.2G311300_v2.0.a1 |
| pyrus_communis | pycom01g22970 pycom01g22980 pycom07g26280 |
| rosa_chinensis | RchiOBHm_Chr1g0380961 |
| rosa_laevigata | RLG00000026256 |
| rosa_multiflora | Rmu_sc0002962.1_g000023 Rmu_sc0031952.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00278900 |
| rosa_rugosa | Rorug01G0425800 Rorug01G0425900 |
| rosa_samantha | Rh1AG449900 Rh1BG405700 Rh1CG419700 Rh1DG436200 |
| rosa_wichuraiana | Rw1G039190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 2557, 3430 |
| Acc65I | GGTACC | 1 cut(s) | 1041 |
| AccB1I | GGYRCC | 1 cut(s) | 1041 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2219, 2360 |
| AccBSI | CCGCTC | 2 cut(s) | 867, 1039 |
| AccII | CGCG | 4 cut(s) | 182, 1083, 1095, 1167 |
| AcoI | YGGCCR | 1 cut(s) | 1078 |
| AcsI | RAATTY | 1 cut(s) | 1489 |
| AcuI | CTGAAG | 3 cut(s) | 944, 1677, 3318 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 1626, 1669, 2105, 2161, 2162, 2174, 2219, 2360, 3428 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2171 |
| AjnI | CCWGG | 2 cut(s) | 2598, 3202 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2107, 2139 |
| Alw21I | GWGCWC | 4 cut(s) | 270, 1177, 2059, 2440 |
| Alw26I | GTCTC | 6 cut(s) | 628, 999, 1173, 2316, 2586, 2624 |
| Alw44I | GTGCAC | 2 cut(s) | 2055, 2436 |
| Ama87I | CYCGRG | 1 cut(s) | 1176 |
| AoxI | GGCC | 4 cut(s) | 1078, 2096, 2120, 2335 |
| ApaI | GGGCCC | 1 cut(s) | 2339 |
| ApaLI | GTGCAC | 2 cut(s) | 2055, 2436 |
| ApeKI | GCWGC | 5 cut(s) | 1257, 1458, 2191, 2870, 3088 |
| ApoI | RAATTY | 1 cut(s) | 1489 |
| ArsI | GACNNNNNNTTYG | 5 cut(s) | 27, 1764, 1796, 2981, 3013 |
| AseI | ATTAAT | 1 cut(s) | 2244 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1474 |
| Asp718I | GGTACC | 1 cut(s) | 1041 |
| AspA2I | CCTAGG | 1 cut(s) | 1349 |
| AspLEI | GCGC | 2 cut(s) | 975, 2301 |
| AspS9I | GGNCC | 7 cut(s) | 1569, 2096, 2165, 2335, 2336, 2637, 3509 |
| AsuC2I | CCSGG | 1 cut(s) | 1429 |
| AsuII | TTCGAA | 1 cut(s) | 323 |
| AvaI | CYCGRG | 1 cut(s) | 1176 |
| AvaII | GGWCC | 4 cut(s) | 1569, 2165, 2637, 3509 |
| AvrII | CCTAGG | 1 cut(s) | 1349 |
| BaeGI | GKGCMC | 3 cut(s) | 2059, 2339, 2440 |
| BamHI | GGATCC | 1 cut(s) | 2449 |
| BanI | GGYRCC | 1 cut(s) | 1041 |
| BanII | GRGCYC | 2 cut(s) | 1177, 2339 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1945, 1977 |
| BauI | CACGAG | 1 cut(s) | 3209 |
| BbsI | GAAGAC | 4 cut(s) | 702, 807, 2037, 3324 |
| Bbv12I | GWGCWC | 4 cut(s) | 270, 1177, 2059, 2440 |
| BbvI | GCAGC | 5 cut(s) | 1269, 1470, 2178, 2857, 3100 |
| BceAI | ACGGC | 2 cut(s) | 563, 3451 |
| BciT130I | CCWGG | 2 cut(s) | 2600, 3204 |
| BciVI | GTATCC | 2 cut(s) | 2806, 3591 |
| BcnI | CCSGG | 1 cut(s) | 1429 |
| BcoDI | GTCTC | 6 cut(s) | 628, 999, 1173, 2316, 2586, 2624 |
| BfaI | CTAG | 9 cut(s) | 114, 683, 723, 1350, 2052, 2306, 3092, 3270, 3350 |
| BfmI | CTRYAG | 1 cut(s) | 2643 |
| BfuAI | ACCTGC | 2 cut(s) | 2557, 3430 |
| BfuI | GTATCC | 2 cut(s) | 2806, 3591 |
| BglII | AGATCT | 3 cut(s) | 1295, 1418, 1730 |
| BisI | GCNGC | 8 cut(s) | 206, 535, 1081, 1258, 1459, 2192, 2871, 3089 |
| BlnI | CCTAGG | 1 cut(s) | 1349 |
| BlpI | GCTNAGC | 1 cut(s) | 2460 |
| BlsI | GCNGC | 8 cut(s) | 207, 536, 1082, 1259, 1460, 2193, 2872, 3090 |
| BmcAI | AGTACT | 2 cut(s) | 53, 2368 |
| Bme1390I | CCNGG | 3 cut(s) | 1429, 2600, 3204 |
| Bme18I | GGWCC | 4 cut(s) | 1569, 2165, 2637, 3509 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2171 |
| BmeT110I | CYCGRG | 1 cut(s) | 1176 |
| BmgT120I | GGNCC | 7 cut(s) | 1569, 2096, 2165, 2335, 2336, 2637, 3509 |
| BmiI | GGNNCC | 9 cut(s) | 1043, 1618, 2166, 2208, 2337, 2374, 2451, 3510, 3532 |
| BmrFI | CCNGG | 3 cut(s) | 1429, 2600, 3204 |
| BmrI | ACTGGG | 3 cut(s) | 1126, 1476, 2448 |
| BmuI | ACTGGG | 3 cut(s) | 1126, 1476, 2448 |
| BpiI | GAAGAC | 4 cut(s) | 702, 807, 2037, 3324 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1282, 1314 |
| BpmI | CTGGAG | 5 cut(s) | 1284, 1620, 2016, 2391, 3111 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2460 |
| Bpu14I | TTCGAA | 1 cut(s) | 323 |
| BpuMI | CCSGG | 1 cut(s) | 1429 |
| BsaI | GGTCTC | 3 cut(s) | 999, 1173, 2316 |
| BsaJI | CCNNGG | 5 cut(s) | 1349, 2099, 2354, 2465, 3477 |
| BsaWI | WCCGGW | 1 cut(s) | 2288 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 1626, 1669, 2105, 2161, 2162, 2174, 2219, 2360, 3428 |
| BseBI | CCWGG | 2 cut(s) | 2600, 3204 |
| BseDI | CCNNGG | 5 cut(s) | 1349, 2099, 2354, 2465, 3477 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 1626, 1669, 2105, 2161, 2162, 2174, 2219, 2360, 3428 |
| BseMII | CTCAG | 7 cut(s) | 888, 1436, 2327, 2451, 2619, 2772, 2808 |
| BseRI | GAGGAG | 6 cut(s) | 22, 120, 123, 200, 288, 2083 |
| BseSI | GKGCMC | 3 cut(s) | 2059, 2339, 2440 |
| BseXI | GCAGC | 5 cut(s) | 1269, 1470, 2178, 2857, 3100 |
| BseYI | CCCAGC | 1 cut(s) | 2561 |
| BsgI | GTGCAG | 1 cut(s) | 2555 |
| Bsh1236I | CGCG | 4 cut(s) | 182, 1083, 1095, 1167 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1087 |
| BshFI | GGCC | 4 cut(s) | 1080, 2098, 2122, 2337 |
| BshNI | GGYRCC | 1 cut(s) | 1041 |
| BsiEI | CGRYCG | 1 cut(s) | 1087 |
| BsiHKAI | GWGCWC | 4 cut(s) | 270, 1177, 2059, 2440 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1176 |
| BsiSI | CCGG | 2 cut(s) | 1429, 2289 |
| BslFI | GGGAC | 9 cut(s) | 827, 1127, 1241, 1411, 1889, 2096, 2178, 2510, 2705 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 1626, 1669, 2105, 2161, 2162, 2174, 2219, 2360, 3428 |
| BsmAI | GTCTC | 6 cut(s) | 628, 999, 1173, 2316, 2586, 2624 |
| BsmBI | CGTCTC | 1 cut(s) | 628 |
| BsmFI | GGGAC | 9 cut(s) | 827, 1127, 1241, 1411, 1889, 2096, 2178, 2510, 2705 |
| BsmI | GAATGC | 1 cut(s) | 3157 |
| BsnI | GGCC | 4 cut(s) | 1080, 2098, 2122, 2337 |
| Bso31I | GGTCTC | 3 cut(s) | 999, 1173, 2316 |
| BsoBI | CYCGRG | 1 cut(s) | 1176 |
| Bsp119I | TTCGAA | 1 cut(s) | 323 |
| Bsp120I | GGGCCC | 1 cut(s) | 2335 |
| Bsp1286I | GDGCHC | 5 cut(s) | 270, 1177, 2059, 2339, 2440 |
| Bsp1407I | TGTACA | 1 cut(s) | 2787 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2460 |
| Bsp19I | CCATGG | 2 cut(s) | 2354, 2465 |
| Bsp68I | TCGCGA | 2 cut(s) | 1095, 1167 |
| BspANI | GGCC | 4 cut(s) | 1080, 2098, 2122, 2337 |
| BspCNI | CTCAG | 7 cut(s) | 889, 1435, 2326, 2452, 2620, 2773, 2809 |
| BspFNI | CGCG | 4 cut(s) | 182, 1083, 1095, 1167 |
| BspHI | TCATGA | 2 cut(s) | 1159, 2587 |
| BspLI | GGNNCC | 9 cut(s) | 1043, 1618, 2166, 2208, 2337, 2374, 2451, 3510, 3532 |
| BspMI | ACCTGC | 2 cut(s) | 2557, 3430 |
| BspQI | GCTCTTC | 1 cut(s) | 3282 |
| BspT104I | TTCGAA | 1 cut(s) | 323 |
| BspT107I | GGYRCC | 1 cut(s) | 1041 |
| BspTNI | GGTCTC | 3 cut(s) | 999, 1173, 2316 |
| BsrBI | CCGCTC | 2 cut(s) | 867, 1039 |
| BsrGI | TGTACA | 1 cut(s) | 2787 |
| BssECI | CCNNGG | 5 cut(s) | 1349, 2099, 2354, 2465, 3477 |
| BssSI | CACGAG | 1 cut(s) | 3209 |
| BssT1I | CCWWGG | 4 cut(s) | 1349, 2099, 2354, 2465 |
| Bst2BI | CACGAG | 1 cut(s) | 3209 |
| Bst2UI | CCWGG | 2 cut(s) | 2600, 3204 |
| Bst6I | CTCTTC | 6 cut(s) | 125, 320, 329, 377, 941, 3282 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2771 |
| BstAUI | TGTACA | 1 cut(s) | 2787 |
| BstBI | TTCGAA | 1 cut(s) | 323 |
| BstC8I | GCNNGC | 5 cut(s) | 749, 1169, 1173, 1434, 1501 |
| BstDSI | CCRYGG | 2 cut(s) | 2354, 2465 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2103 |
| BstFNI | CGCG | 4 cut(s) | 182, 1083, 1095, 1167 |
| BstHHI | GCGC | 2 cut(s) | 975, 2301 |
| BstMAI | GTCTC | 6 cut(s) | 628, 999, 1173, 2316, 2586, 2624 |
| BstMCI | CGRYCG | 1 cut(s) | 1087 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 744, 2771, 2876, 3116, 3497, 3548 |
| BstNI | CCWGG | 2 cut(s) | 2600, 3204 |
| BstNSI | RCATGY | 2 cut(s) | 2350, 2998 |
| BstSCI | CCNGG | 3 cut(s) | 1427, 2598, 3202 |
| BstSFI | CTRYAG | 1 cut(s) | 2643 |
| BstSLI | GKGCMC | 3 cut(s) | 2059, 2339, 2440 |
| BstUI | CGCG | 4 cut(s) | 182, 1083, 1095, 1167 |
| BstV1I | GCAGC | 5 cut(s) | 1269, 1470, 2178, 2857, 3100 |
| BstV2I | GAAGAC | 4 cut(s) | 702, 807, 2037, 3324 |
| BstX2I | RGATCY | 8 cut(s) | 950, 1295, 1418, 1730, 2449, 2602, 2842, 2959 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1651 |
| BstYI | RGATCY | 8 cut(s) | 950, 1295, 1418, 1730, 2449, 2602, 2842, 2959 |
| BsuI | GTATCC | 2 cut(s) | 2806, 3591 |
| BsuRI | GGCC | 4 cut(s) | 1080, 2098, 2122, 2337 |
| BtgI | CCRYGG | 2 cut(s) | 2354, 2465 |
| BtsI | GCAGTG | 1 cut(s) | 1828 |
| BtsIMutI | CAGTG | 7 cut(s) | 1828, 2031, 2461, 2538, 2801, 3135, 3184 |
| BtuMI | TCGCGA | 2 cut(s) | 1095, 1167 |
| BveI | ACCTGC | 2 cut(s) | 2557, 3430 |
| Cac8I | GCNNGC | 5 cut(s) | 749, 1169, 1173, 1434, 1501 |
| CciI | TCATGA | 2 cut(s) | 1159, 2587 |
| CfoI | GCGC | 2 cut(s) | 975, 2301 |
| Cfr13I | GGNCC | 7 cut(s) | 1569, 2096, 2165, 2335, 2336, 2637, 3509 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1924, 1959, 3294, 3329 |
| DraI | TTTAAA | 2 cut(s) | 585, 2931 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2171 |
| EaeI | YGGCCR | 1 cut(s) | 1078 |
| Eam1104I | CTCTTC | 6 cut(s) | 125, 320, 329, 377, 941, 3282 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2171 |
| EarI | CTCTTC | 6 cut(s) | 125, 320, 329, 377, 941, 3282 |
| EciI | GGCGGA | 5 cut(s) | 117, 223, 2199, 2420, 3134 |
| Ecl136II | GAGCTC | 1 cut(s) | 1175 |
| Eco130I | CCWWGG | 4 cut(s) | 1349, 2099, 2354, 2465 |
| Eco24I | GRGCYC | 2 cut(s) | 1177, 2339 |
| Eco31I | GGTCTC | 3 cut(s) | 999, 1173, 2316 |
| Eco47I | GGWCC | 4 cut(s) | 1569, 2165, 2637, 3509 |
| Eco53kI | GAGCTC | 1 cut(s) | 1175 |
| Eco57I | CTGAAG | 3 cut(s) | 944, 1677, 3318 |
| Eco88I | CYCGRG | 1 cut(s) | 1176 |
| EcoICRI | GAGCTC | 1 cut(s) | 1175 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2103 |
| EcoO109I | RGGNCCY | 3 cut(s) | 2096, 2165, 2336 |
| EcoRII | CCWGG | 2 cut(s) | 2598, 3202 |
| EcoT14I | CCWWGG | 4 cut(s) | 1349, 2099, 2354, 2465 |
| EcoT22I | ATGCAT | 2 cut(s) | 2352, 2856 |
| EcoT38I | GRGCYC | 2 cut(s) | 1177, 2339 |
| ErhI | CCWWGG | 4 cut(s) | 1349, 2099, 2354, 2465 |
| Esp3I | CGTCTC | 1 cut(s) | 628 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1720, 1752, 1810, 1842, 3384, 3416 |
| FaqI | GGGAC | 9 cut(s) | 827, 1127, 1241, 1411, 1889, 2096, 2178, 2510, 2705 |
| FauI | CCCGC | 1 cut(s) | 1924 |
| Fnu4HI | GCNGC | 8 cut(s) | 206, 535, 1081, 1258, 1459, 2192, 2871, 3089 |
| FriOI | GRGCYC | 2 cut(s) | 1177, 2339 |
| Fsp4HI | GCNGC | 8 cut(s) | 206, 535, 1081, 1258, 1459, 2192, 2871, 3089 |
| FspBI | CTAG | 9 cut(s) | 114, 683, 723, 1350, 2052, 2306, 3092, 3270, 3350 |
| GlaI | GCGC | 2 cut(s) | 974, 2300 |
| GluI | GCNGC | 8 cut(s) | 206, 535, 1081, 1258, 1459, 2192, 2871, 3089 |
| GsaI | CCCAGC | 1 cut(s) | 2565 |
| GsuI | CTGGAG | 5 cut(s) | 1284, 1620, 2016, 2391, 3111 |
| HaeIII | GGCC | 4 cut(s) | 1080, 2098, 2122, 2337 |
| HapII | CCGG | 2 cut(s) | 1429, 2289 |
| HhaI | GCGC | 2 cut(s) | 975, 2301 |
| Hin6I | GCGC | 2 cut(s) | 973, 2299 |
| HinP1I | GCGC | 2 cut(s) | 973, 2299 |
| HincII | GTYRAC | 1 cut(s) | 1408 |
| HindII | GTYRAC | 1 cut(s) | 1408 |
| HindIII | AAGCTT | 3 cut(s) | 956, 1434, 2750 |
| HpaI | GTTAAC | 1 cut(s) | 1408 |
| HpaII | CCGG | 2 cut(s) | 1429, 2289 |
| Hpy166II | GTNNAC | 9 cut(s) | 1055, 1061, 1408, 2047, 2057, 2438, 2640, 3442, 3620 |
| Hpy8I | GTNNAC | 9 cut(s) | 1055, 1061, 1408, 2047, 2057, 2438, 2640, 3442, 3620 |
| Hpy99I | CGWCG | 3 cut(s) | 202, 542, 2039 |
| HpyCH4IV | ACGT | 2 cut(s) | 1057, 2059 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 744, 2771, 2876, 3116, 3497, 3548 |
| HpySE526I | ACGT | 2 cut(s) | 1057, 2059 |
| HspAI | GCGC | 2 cut(s) | 973, 2299 |
| KpnI | GGTACC | 1 cut(s) | 1045 |
| KspAI | GTTAAC | 1 cut(s) | 1408 |
| LguI | GCTCTTC | 1 cut(s) | 3282 |
| LmnI | GCTCC | 8 cut(s) | 110, 1672, 1978, 2212, 2372, 3085, 3130, 3187 |
| Lsp1109I | GCAGC | 5 cut(s) | 1269, 1470, 2178, 2857, 3100 |
| MaeI | CTAG | 9 cut(s) | 114, 683, 723, 1350, 2052, 2306, 3092, 3270, 3350 |
| MaeII | ACGT | 2 cut(s) | 1057, 2059 |
| MaeIII | GTNAC | 8 cut(s) | 1010, 1142, 1239, 2291, 2685, 3160, 3206, 3378 |
| MbiI | CCGCTC | 2 cut(s) | 867, 1039 |
| MfeI | CAATTG | 1 cut(s) | 2709 |
| MflI | RGATCY | 8 cut(s) | 950, 1295, 1418, 1730, 2449, 2602, 2842, 2959 |
| MhlI | GDGCHC | 5 cut(s) | 270, 1177, 2059, 2339, 2440 |
| MluCI | AATT | 8 cut(s) | 1489, 1954, 1984, 2083, 2268, 2709, 3300, 3585 |
| MlyI | GAGTC | 7 cut(s) | 170, 451, 1007, 1406, 1879, 2672, 3581 |
| MmeI | TCCRAC | 5 cut(s) | 582, 1380, 1793, 3228, 3575 |
| Mph1103I | ATGCAT | 2 cut(s) | 2352, 2856 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1474 |
| MseI | TTAA | 9 cut(s) | 584, 884, 911, 1407, 1454, 2244, 2864, 2930, 3590 |
| MslI | CAYNNNNRTG | 8 cut(s) | 828, 990, 1026, 1050, 1248, 2220, 2443, 2481 |
| MspA1I | CMGCKG | 2 cut(s) | 1919, 2627 |
| MspI | CCGG | 2 cut(s) | 1429, 2289 |
| MspR9I | CCNGG | 3 cut(s) | 1429, 2600, 3204 |
| MunI | CAATTG | 1 cut(s) | 2709 |
| Mva1269I | GAATGC | 1 cut(s) | 3157 |
| MvaI | CCWGG | 2 cut(s) | 2600, 3204 |
| MvnI | CGCG | 4 cut(s) | 182, 1083, 1095, 1167 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 744, 2771, 2876, 3116, 3497, 3548 |
| NciI | CCSGG | 1 cut(s) | 1429 |
| NcoI | CCATGG | 2 cut(s) | 2354, 2465 |
| NlaIV | GGNNCC | 9 cut(s) | 1043, 1618, 2166, 2208, 2337, 2374, 2451, 3510, 3532 |
| NmeAIII | GCCGAG | 1 cut(s) | 3502 |
| NmuCI | GTSAC | 6 cut(s) | 1010, 1142, 1239, 2291, 2685, 3206 |
| NruI | TCGCGA | 2 cut(s) | 1095, 1167 |
| NsiI | ATGCAT | 2 cut(s) | 2352, 2856 |
| NspI | RCATGY | 2 cut(s) | 2350, 2998 |
| NspV | TTCGAA | 1 cut(s) | 323 |
| PaeR7I | CTCGAG | 1 cut(s) | 1176 |
| PagI | TCATGA | 2 cut(s) | 1159, 2587 |
| PciSI | GCTCTTC | 1 cut(s) | 3282 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 11, 320 |
| PctI | GAATGC | 1 cut(s) | 3157 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1474 |
| PflFI | GACNNNGTC | 3 cut(s) | 1869, 2635, 3179 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2219, 2360 |
| PkrI | GCNGC | 8 cut(s) | 207, 536, 1082, 1259, 1460, 2193, 2872, 3090 |
| PleI | GAGTC | 7 cut(s) | 169, 450, 1007, 1405, 1878, 2671, 3580 |
| PpsI | GAGTC | 7 cut(s) | 169, 450, 1007, 1405, 1878, 2671, 3580 |
| PpuMI | RGGWCCY | 1 cut(s) | 2165 |
| PshBI | ATTAAT | 1 cut(s) | 2244 |
| Psp124BI | GAGCTC | 1 cut(s) | 1177 |
| Psp5II | RGGWCCY | 1 cut(s) | 2165 |
| Psp6I | CCWGG | 2 cut(s) | 2598, 3202 |
| PspFI | CCCAGC | 1 cut(s) | 2561 |
| PspGI | CCWGG | 2 cut(s) | 2598, 3202 |
| PspN4I | GGNNCC | 9 cut(s) | 1043, 1618, 2166, 2208, 2337, 2374, 2451, 3510, 3532 |
| PspOMI | GGGCCC | 1 cut(s) | 2335 |
| PspPI | GGNCC | 7 cut(s) | 1569, 2096, 2165, 2335, 2336, 2637, 3509 |
| PspPPI | RGGWCCY | 1 cut(s) | 2165 |
| PsuI | RGATCY | 8 cut(s) | 950, 1295, 1418, 1730, 2449, 2602, 2842, 2959 |
| PsyI | GACNNNGTC | 3 cut(s) | 1869, 2635, 3179 |
| PvuII | CAGCTG | 1 cut(s) | 2627 |
| RruI | TCGCGA | 2 cut(s) | 1095, 1167 |
| RseI | CAYNNNNRTG | 8 cut(s) | 828, 990, 1026, 1050, 1248, 2220, 2443, 2481 |
| SacI | GAGCTC | 1 cut(s) | 1177 |
| SapI | GCTCTTC | 1 cut(s) | 3282 |
| SaqAI | TTAA | 9 cut(s) | 584, 884, 911, 1407, 1454, 2244, 2864, 2930, 3590 |
| SatI | GCNGC | 8 cut(s) | 206, 535, 1081, 1258, 1459, 2192, 2871, 3089 |
| Sau96I | GGNCC | 7 cut(s) | 1569, 2096, 2165, 2335, 2336, 2637, 3509 |
| ScaI | AGTACT | 2 cut(s) | 53, 2368 |
| SchI | GAGTC | 7 cut(s) | 170, 451, 1007, 1406, 1879, 2672, 3581 |
| ScrFI | CCNGG | 3 cut(s) | 1429, 2600, 3204 |
| SduI | GDGCHC | 5 cut(s) | 270, 1177, 2059, 2339, 2440 |
| SfcI | CTRYAG | 1 cut(s) | 2643 |
| Sfr274I | CTCGAG | 1 cut(s) | 1176 |
| SfuI | TTCGAA | 1 cut(s) | 323 |
| SinI | GGWCC | 4 cut(s) | 1569, 2165, 2637, 3509 |
| SlaI | CTCGAG | 1 cut(s) | 1176 |
| SmiI | ATTTAAAT | 1 cut(s) | 585 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 828, 990, 1026, 1050, 1248, 2220, 2443, 2481 |
| SmlI | CTYRAG | 1 cut(s) | 1176 |
| SmoI | CTYRAG | 1 cut(s) | 1176 |
| Sse9I | AATT | 8 cut(s) | 1489, 1954, 1984, 2083, 2268, 2709, 3300, 3585 |
| SspMI | CTAG | 9 cut(s) | 114, 683, 723, 1350, 2052, 2306, 3092, 3270, 3350 |
| SstI | GAGCTC | 1 cut(s) | 1177 |
| StyD4I | CCNGG | 3 cut(s) | 1427, 2598, 3202 |
| StyI | CCWWGG | 4 cut(s) | 1349, 2099, 2354, 2465 |
| SwaI | ATTTAAAT | 1 cut(s) | 585 |
| TaiI | ACGT | 2 cut(s) | 1060, 2062 |
| TaqII | GACCGA | 2 cut(s) | 1161, 1882 |
| TasI | AATT | 8 cut(s) | 1489, 1954, 1984, 2083, 2268, 2709, 3300, 3585 |
| TatI | WGTACW | 8 cut(s) | 51, 1512, 1623, 2366, 2473, 2777, 2787, 3617 |
| TauI | GCSGC | 3 cut(s) | 208, 537, 1083 |
| Tru1I | TTAA | 9 cut(s) | 584, 884, 911, 1407, 1454, 2244, 2864, 2930, 3590 |
| Tru9I | TTAA | 9 cut(s) | 584, 884, 911, 1407, 1454, 2244, 2864, 2930, 3590 |
| TscAI | CASTG | 7 cut(s) | 1828, 2031, 2461, 2538, 2801, 3135, 3184 |
| TseFI | GTSAC | 6 cut(s) | 1010, 1142, 1239, 2291, 2685, 3206 |
| TseI | GCWGC | 5 cut(s) | 1257, 1458, 2191, 2870, 3088 |
| Tsp45I | GTSAC | 6 cut(s) | 1010, 1142, 1239, 2291, 2685, 3206 |
| TspGWI | ACGGA | 1 cut(s) | 607 |
| TspRI | CASTG | 7 cut(s) | 1828, 2031, 2461, 2538, 2801, 3135, 3184 |
| Tth111I | GACNNNGTC | 3 cut(s) | 1869, 2635, 3179 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2219, 2360 |
| VneI | GTGCAC | 2 cut(s) | 2055, 2436 |
| VpaK11BI | GGWCC | 4 cut(s) | 1569, 2165, 2637, 3509 |
| VspI | ATTAAT | 1 cut(s) | 2244 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2103 |
| XapI | RAATTY | 1 cut(s) | 1489 |
| XbaI | TCTAGA | 1 cut(s) | 682 |
| XceI | RCATGY | 2 cut(s) | 2350, 2998 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3250 |
| XhoI | CTCGAG | 1 cut(s) | 1176 |
| XmaJI | CCTAGG | 1 cut(s) | 1349 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1474 |
| XspI | CTAG | 9 cut(s) | 114, 683, 723, 1350, 2052, 2306, 3092, 3270, 3350 |
| ZrmI | AGTACT | 2 cut(s) | 53, 2368 |
| Zsp2I | ATGCAT | 2 cut(s) | 2352, 2856 |