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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G53440 AT5G53440 |
| fragaria_vesca | FvH4_7g31740 FvH4_7g31740 FvH4_7g31740 |
| malus_domestica | MD01G1219900.v1.1 MD07G1290200.v1.1 |
| prunus_persica | Prupe.2G311300_v2.0.a1 Prupe.2G311300_v2.0.a1 Prupe.2G311300_v2.0.a1 |
| pyrus_communis | pycom01g22970 pycom01g22980 pycom07g26280 |
| rosa_chinensis | RchiOBHm_Chr1g0380961 |
| rosa_laevigata | RLG00000026256 |
| rosa_multiflora | Rmu_sc0002962.1_g000023 Rmu_sc0031952.1_g000002 |
| rosa_roxburghii | Rroxscaffold_4G00278900 |
| rosa_rugosa | Rorug01G0425800 Rorug01G0425900 |
| rosa_samantha | Rh1AG449900 Rh1BG405700 Rh1CG419700 Rh1DG436200 |
| rosa_wichuraiana | Rw1G039190 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 2563, 3436 |
| Acc65I | GGTACC | 1 cut(s) | 1053 |
| AccB1I | GGYRCC | 1 cut(s) | 1053 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2225, 2366 |
| AccBSI | CCGCTC | 2 cut(s) | 879, 1051 |
| AccII | CGCG | 2 cut(s) | 1095, 1107 |
| AcoI | YGGCCR | 1 cut(s) | 1090 |
| AcsI | RAATTY | 1 cut(s) | 1495 |
| AcuI | CTGAAG | 3 cut(s) | 956, 1683, 3324 |
| AfaI | GTAC | 7 cut(s) | 53, 1055, 1520, 1631, 2481, 2795, 3625 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 1632, 1675, 2111, 2167, 2168, 2180, 2225, 2366, 3434 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2177 |
| AjnI | CCWGG | 2 cut(s) | 2604, 3208 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2113, 2145 |
| Alw21I | GWGCWC | 4 cut(s) | 270, 1189, 2065, 2446 |
| Alw26I | GTCTC | 5 cut(s) | 640, 1185, 2322, 2592, 2630 |
| Alw44I | GTGCAC | 2 cut(s) | 2061, 2442 |
| Ama87I | CYCGRG | 1 cut(s) | 1188 |
| AoxI | GGCC | 4 cut(s) | 1090, 2102, 2126, 2341 |
| ApaI | GGGCCC | 1 cut(s) | 2345 |
| ApaLI | GTGCAC | 2 cut(s) | 2061, 2442 |
| ApeKI | GCWGC | 5 cut(s) | 1263, 1464, 2197, 2876, 3094 |
| ApoI | RAATTY | 1 cut(s) | 1495 |
| ArsI | GACNNNNNNTTYG | 5 cut(s) | 27, 1770, 1802, 2987, 3019 |
| AseI | ATTAAT | 1 cut(s) | 2250 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1480 |
| Asp718I | GGTACC | 1 cut(s) | 1053 |
| AspA2I | CCTAGG | 1 cut(s) | 1355 |
| AspLEI | GCGC | 2 cut(s) | 207, 987 |
| AspS9I | GGNCC | 8 cut(s) | 1018, 1575, 2102, 2171, 2341, 2342, 2643, 3515 |
| AsuC2I | CCSGG | 1 cut(s) | 1435 |
| AsuII | TTCGAA | 1 cut(s) | 323 |
| AvaI | CYCGRG | 1 cut(s) | 1188 |
| AvaII | GGWCC | 5 cut(s) | 1018, 1575, 2171, 2643, 3515 |
| AvrII | CCTAGG | 1 cut(s) | 1355 |
| BaeGI | GKGCMC | 3 cut(s) | 2065, 2345, 2446 |
| BamHI | GGATCC | 1 cut(s) | 2455 |
| BanI | GGYRCC | 1 cut(s) | 1053 |
| BanII | GRGCYC | 2 cut(s) | 1189, 2345 |
| BauI | CACGAG | 2 cut(s) | 2682, 3215 |
| BbsI | GAAGAC | 3 cut(s) | 714, 819, 3330 |
| Bbv12I | GWGCWC | 4 cut(s) | 270, 1189, 2065, 2446 |
| BbvI | GCAGC | 5 cut(s) | 1275, 1476, 2184, 2863, 3106 |
| BceAI | ACGGC | 2 cut(s) | 575, 3457 |
| BciT130I | CCWGG | 2 cut(s) | 2606, 3210 |
| BciVI | GTATCC | 2 cut(s) | 2812, 3597 |
| BcnI | CCSGG | 1 cut(s) | 1435 |
| BcoDI | GTCTC | 5 cut(s) | 640, 1185, 2322, 2592, 2630 |
| BfaI | CTAG | 8 cut(s) | 695, 735, 1356, 2058, 2312, 3098, 3276, 3356 |
| BfmI | CTRYAG | 1 cut(s) | 2649 |
| BfoI | RGCGCY | 1 cut(s) | 208 |
| BfuAI | ACCTGC | 2 cut(s) | 2563, 3436 |
| BfuI | GTATCC | 2 cut(s) | 2812, 3597 |
| BglII | AGATCT | 3 cut(s) | 1301, 1424, 1736 |
| BisI | GCNGC | 7 cut(s) | 547, 1093, 1264, 1465, 2198, 2877, 3095 |
| BlnI | CCTAGG | 1 cut(s) | 1355 |
| BlpI | GCTNAGC | 1 cut(s) | 2466 |
| BlsI | GCNGC | 7 cut(s) | 548, 1094, 1265, 1466, 2199, 2878, 3096 |
| BmcAI | AGTACT | 1 cut(s) | 53 |
| Bme1390I | CCNGG | 3 cut(s) | 1435, 2606, 3210 |
| Bme18I | GGWCC | 5 cut(s) | 1018, 1575, 2171, 2643, 3515 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2177 |
| BmeT110I | CYCGRG | 1 cut(s) | 1188 |
| BmgT120I | GGNCC | 8 cut(s) | 1018, 1575, 2102, 2171, 2341, 2342, 2643, 3515 |
| BmrFI | CCNGG | 3 cut(s) | 1435, 2606, 3210 |
| BmrI | ACTGGG | 3 cut(s) | 1138, 1482, 2454 |
| BmuI | ACTGGG | 3 cut(s) | 1138, 1482, 2454 |
| BpiI | GAAGAC | 3 cut(s) | 714, 819, 3330 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1288, 1320 |
| BpmI | CTGGAG | 5 cut(s) | 1290, 1626, 2022, 2397, 3117 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2466 |
| Bpu14I | TTCGAA | 1 cut(s) | 323 |
| BpuMI | CCSGG | 1 cut(s) | 1435 |
| BsaBI | GATNNNNATC | 9 cut(s) | 690, 730, 1011, 1113, 1149, 1209, 1215, 2847, 2893 |
| BsaI | GGTCTC | 2 cut(s) | 1185, 2322 |
| BsaJI | CCNNGG | 5 cut(s) | 1355, 2105, 2360, 2471, 3483 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 1632, 1675, 2111, 2167, 2168, 2180, 2225, 2366, 3434 |
| Bse8I | GATNNNNATC | 9 cut(s) | 690, 730, 1011, 1113, 1149, 1209, 1215, 2847, 2893 |
| BseBI | CCWGG | 2 cut(s) | 2606, 3210 |
| BseDI | CCNNGG | 5 cut(s) | 1355, 2105, 2360, 2471, 3483 |
| BseJI | GATNNNNATC | 9 cut(s) | 690, 730, 1011, 1113, 1149, 1209, 1215, 2847, 2893 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 1632, 1675, 2111, 2167, 2168, 2180, 2225, 2366, 3434 |
| BseMII | CTCAG | 8 cut(s) | 900, 1442, 2333, 2457, 2625, 2778, 2814, 3253 |
| BseRI | GAGGAG | 6 cut(s) | 22, 120, 123, 200, 288, 2089 |
| BseSI | GKGCMC | 3 cut(s) | 2065, 2345, 2446 |
| BseXI | GCAGC | 5 cut(s) | 1275, 1476, 2184, 2863, 3106 |
| BseYI | CCCAGC | 1 cut(s) | 2567 |
| BsgI | GTGCAG | 1 cut(s) | 2561 |
| Bsh1236I | CGCG | 2 cut(s) | 1095, 1107 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1099 |
| BshFI | GGCC | 4 cut(s) | 1092, 2104, 2128, 2343 |
| BshNI | GGYRCC | 1 cut(s) | 1053 |
| BsiEI | CGRYCG | 1 cut(s) | 1099 |
| BsiHKAI | GWGCWC | 4 cut(s) | 270, 1189, 2065, 2446 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1188 |
| BsiSI | CCGG | 2 cut(s) | 208, 1435 |
| BslFI | GGGAC | 9 cut(s) | 839, 1031, 1139, 1247, 1417, 1895, 2102, 2184, 2711 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 1632, 1675, 2111, 2167, 2168, 2180, 2225, 2366, 3434 |
| BsmAI | GTCTC | 5 cut(s) | 640, 1185, 2322, 2592, 2630 |
| BsmBI | CGTCTC | 1 cut(s) | 640 |
| BsmFI | GGGAC | 9 cut(s) | 839, 1031, 1139, 1247, 1417, 1895, 2102, 2184, 2711 |
| BsmI | GAATGC | 1 cut(s) | 3163 |
| BsnI | GGCC | 4 cut(s) | 1092, 2104, 2128, 2343 |
| Bso31I | GGTCTC | 2 cut(s) | 1185, 2322 |
| BsoBI | CYCGRG | 1 cut(s) | 1188 |
| Bsp119I | TTCGAA | 1 cut(s) | 323 |
| Bsp120I | GGGCCC | 1 cut(s) | 2341 |
| Bsp1286I | GDGCHC | 5 cut(s) | 270, 1189, 2065, 2345, 2446 |
| Bsp1407I | TGTACA | 1 cut(s) | 2793 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2466 |
| Bsp19I | CCATGG | 2 cut(s) | 2360, 2471 |
| Bsp68I | TCGCGA | 1 cut(s) | 1107 |
| BspANI | GGCC | 4 cut(s) | 1092, 2104, 2128, 2343 |
| BspCNI | CTCAG | 8 cut(s) | 901, 1441, 2332, 2458, 2626, 2779, 2815, 3252 |
| BspFNI | CGCG | 2 cut(s) | 1095, 1107 |
| BspHI | TCATGA | 2 cut(s) | 1171, 2593 |
| BspMI | ACCTGC | 2 cut(s) | 2563, 3436 |
| BspQI | GCTCTTC | 1 cut(s) | 3288 |
| BspT104I | TTCGAA | 1 cut(s) | 323 |
| BspT107I | GGYRCC | 1 cut(s) | 1053 |
| BspTNI | GGTCTC | 2 cut(s) | 1185, 2322 |
| BsrBI | CCGCTC | 2 cut(s) | 879, 1051 |
| BsrGI | TGTACA | 1 cut(s) | 2793 |
| BssECI | CCNNGG | 5 cut(s) | 1355, 2105, 2360, 2471, 3483 |
| BssSI | CACGAG | 2 cut(s) | 2682, 3215 |
| BssT1I | CCWWGG | 4 cut(s) | 1355, 2105, 2360, 2471 |
| Bst2BI | CACGAG | 2 cut(s) | 2682, 3215 |
| Bst2UI | CCWGG | 2 cut(s) | 2606, 3210 |
| Bst6I | CTCTTC | 6 cut(s) | 125, 320, 329, 377, 953, 3288 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2777 |
| BstAUI | TGTACA | 1 cut(s) | 2793 |
| BstBI | TTCGAA | 1 cut(s) | 323 |
| BstC8I | GCNNGC | 4 cut(s) | 761, 1185, 1440, 1507 |
| BstDSI | CCRYGG | 2 cut(s) | 2360, 2471 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2109 |
| BstFNI | CGCG | 2 cut(s) | 1095, 1107 |
| BstH2I | RGCGCY | 1 cut(s) | 208 |
| BstHHI | GCGC | 2 cut(s) | 207, 987 |
| BstMAI | GTCTC | 5 cut(s) | 640, 1185, 2322, 2592, 2630 |
| BstMCI | CGRYCG | 1 cut(s) | 1099 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 756, 2777, 2882, 3122, 3503, 3554 |
| BstNI | CCWGG | 2 cut(s) | 2606, 3210 |
| BstNSI | RCATGY | 2 cut(s) | 2356, 3004 |
| BstSCI | CCNGG | 3 cut(s) | 1433, 2604, 3208 |
| BstSFI | CTRYAG | 1 cut(s) | 2649 |
| BstSLI | GKGCMC | 3 cut(s) | 2065, 2345, 2446 |
| BstUI | CGCG | 2 cut(s) | 1095, 1107 |
| BstV1I | GCAGC | 5 cut(s) | 1275, 1476, 2184, 2863, 3106 |
| BstV2I | GAAGAC | 3 cut(s) | 714, 819, 3330 |
| BstX2I | RGATCY | 8 cut(s) | 962, 1301, 1424, 1736, 2455, 2608, 2848, 2965 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1657 |
| BstYI | RGATCY | 8 cut(s) | 962, 1301, 1424, 1736, 2455, 2608, 2848, 2965 |
| BsuI | GTATCC | 2 cut(s) | 2812, 3597 |
| BsuRI | GGCC | 4 cut(s) | 1092, 2104, 2128, 2343 |
| BtgI | CCRYGG | 2 cut(s) | 2360, 2471 |
| BtsI | GCAGTG | 1 cut(s) | 1834 |
| BtsIMutI | CAGTG | 7 cut(s) | 721, 1834, 2037, 2467, 2544, 2807, 3141 |
| BtuMI | TCGCGA | 1 cut(s) | 1107 |
| BveI | ACCTGC | 2 cut(s) | 2563, 3436 |
| Cac8I | GCNNGC | 4 cut(s) | 761, 1185, 1440, 1507 |
| CciI | TCATGA | 2 cut(s) | 1171, 2593 |
| CfoI | GCGC | 2 cut(s) | 207, 987 |
| Cfr13I | GGNCC | 8 cut(s) | 1018, 1575, 2102, 2171, 2341, 2342, 2643, 3515 |
| CseI | GACGC | 1 cut(s) | 2294 |
| Csp6I | GTAC | 7 cut(s) | 52, 1054, 1519, 1630, 2480, 2794, 3624 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1930, 1965, 3300, 3335 |
| CviQI | GTAC | 7 cut(s) | 52, 1054, 1519, 1630, 2480, 2794, 3624 |
| DraI | TTTAAA | 2 cut(s) | 597, 2937 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2177 |
| EaeI | YGGCCR | 1 cut(s) | 1090 |
| Eam1104I | CTCTTC | 6 cut(s) | 125, 320, 329, 377, 953, 3288 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2177 |
| EarI | CTCTTC | 6 cut(s) | 125, 320, 329, 377, 953, 3288 |
| EciI | GGCGGA | 1 cut(s) | 2426 |
| Ecl136II | GAGCTC | 1 cut(s) | 1187 |
| Eco130I | CCWWGG | 4 cut(s) | 1355, 2105, 2360, 2471 |
| Eco24I | GRGCYC | 2 cut(s) | 1189, 2345 |
| Eco31I | GGTCTC | 2 cut(s) | 1185, 2322 |
| Eco47I | GGWCC | 5 cut(s) | 1018, 1575, 2171, 2643, 3515 |
| Eco53kI | GAGCTC | 1 cut(s) | 1187 |
| Eco57I | CTGAAG | 3 cut(s) | 956, 1683, 3324 |
| Eco88I | CYCGRG | 1 cut(s) | 1188 |
| EcoICRI | GAGCTC | 1 cut(s) | 1187 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2109 |
| EcoO109I | RGGNCCY | 3 cut(s) | 2102, 2171, 2342 |
| EcoRII | CCWGG | 2 cut(s) | 2604, 3208 |
| EcoT14I | CCWWGG | 4 cut(s) | 1355, 2105, 2360, 2471 |
| EcoT22I | ATGCAT | 2 cut(s) | 2358, 2862 |
| EcoT38I | GRGCYC | 2 cut(s) | 1189, 2345 |
| ErhI | CCWWGG | 4 cut(s) | 1355, 2105, 2360, 2471 |
| Esp3I | CGTCTC | 1 cut(s) | 640 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 1726, 1758, 1816, 1848, 3390, 3422 |
| FaqI | GGGAC | 9 cut(s) | 839, 1031, 1139, 1247, 1417, 1895, 2102, 2184, 2711 |
| FauI | CCCGC | 1 cut(s) | 1930 |
| Fnu4HI | GCNGC | 7 cut(s) | 547, 1093, 1264, 1465, 2198, 2877, 3095 |
| FriOI | GRGCYC | 2 cut(s) | 1189, 2345 |
| Fsp4HI | GCNGC | 7 cut(s) | 547, 1093, 1264, 1465, 2198, 2877, 3095 |
| FspBI | CTAG | 8 cut(s) | 695, 735, 1356, 2058, 2312, 3098, 3276, 3356 |
| GlaI | GCGC | 2 cut(s) | 206, 986 |
| GluI | GCNGC | 7 cut(s) | 547, 1093, 1264, 1465, 2198, 2877, 3095 |
| GsaI | CCCAGC | 1 cut(s) | 2571 |
| GsuI | CTGGAG | 5 cut(s) | 1290, 1626, 2022, 2397, 3117 |
| HaeII | RGCGCY | 1 cut(s) | 208 |
| HaeIII | GGCC | 4 cut(s) | 1092, 2104, 2128, 2343 |
| HapII | CCGG | 2 cut(s) | 208, 1435 |
| HgaI | GACGC | 1 cut(s) | 2294 |
| HhaI | GCGC | 2 cut(s) | 207, 987 |
| Hin6I | GCGC | 2 cut(s) | 205, 985 |
| HinP1I | GCGC | 2 cut(s) | 205, 985 |
| HincII | GTYRAC | 1 cut(s) | 1414 |
| HindII | GTYRAC | 1 cut(s) | 1414 |
| HindIII | AAGCTT | 3 cut(s) | 968, 1440, 2756 |
| HpaI | GTTAAC | 1 cut(s) | 1414 |
| HpaII | CCGG | 2 cut(s) | 208, 1435 |
| Hpy166II | GTNNAC | 9 cut(s) | 1067, 1073, 1414, 2053, 2063, 2309, 2444, 3448, 3626 |
| Hpy8I | GTNNAC | 9 cut(s) | 1067, 1073, 1414, 2053, 2063, 2309, 2444, 3448, 3626 |
| Hpy99I | CGWCG | 2 cut(s) | 202, 554 |
| HpyCH4IV | ACGT | 2 cut(s) | 1069, 2065 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 756, 2777, 2882, 3122, 3503, 3554 |
| HpySE526I | ACGT | 2 cut(s) | 1069, 2065 |
| HspAI | GCGC | 2 cut(s) | 205, 985 |
| KpnI | GGTACC | 1 cut(s) | 1057 |
| KspAI | GTTAAC | 1 cut(s) | 1414 |
| LguI | GCTCTTC | 1 cut(s) | 3288 |
| LmnI | GCTCC | 8 cut(s) | 994, 1678, 1984, 2218, 2378, 3091, 3136, 3193 |
| Lsp1109I | GCAGC | 5 cut(s) | 1275, 1476, 2184, 2863, 3106 |
| MaeI | CTAG | 8 cut(s) | 695, 735, 1356, 2058, 2312, 3098, 3276, 3356 |
| MaeII | ACGT | 2 cut(s) | 1069, 2065 |
| MaeIII | GTNAC | 8 cut(s) | 1022, 1154, 1245, 2297, 2691, 3166, 3212, 3384 |
| MbiI | CCGCTC | 2 cut(s) | 879, 1051 |
| MfeI | CAATTG | 1 cut(s) | 2715 |
| MflI | RGATCY | 8 cut(s) | 962, 1301, 1424, 1736, 2455, 2608, 2848, 2965 |
| MhlI | GDGCHC | 5 cut(s) | 270, 1189, 2065, 2345, 2446 |
| MluCI | AATT | 9 cut(s) | 1495, 1960, 1990, 2089, 2274, 2715, 3306, 3466, 3591 |
| MlyI | GAGTC | 8 cut(s) | 170, 451, 1019, 1412, 1885, 2539, 2678, 3587 |
| MmeI | TCCRAC | 5 cut(s) | 594, 1386, 1799, 3234, 3581 |
| Mph1103I | ATGCAT | 2 cut(s) | 2358, 2862 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1480 |
| MseI | TTAA | 8 cut(s) | 596, 896, 923, 1413, 2250, 2870, 2936, 3596 |
| MslI | CAYNNNNRTG | 9 cut(s) | 840, 1002, 1038, 1062, 1176, 1254, 2226, 2449, 2487 |
| MspA1I | CMGCKG | 2 cut(s) | 1925, 2633 |
| MspI | CCGG | 2 cut(s) | 208, 1435 |
| MspR9I | CCNGG | 3 cut(s) | 1435, 2606, 3210 |
| MunI | CAATTG | 1 cut(s) | 2715 |
| Mva1269I | GAATGC | 1 cut(s) | 3163 |
| MvaI | CCWGG | 2 cut(s) | 2606, 3210 |
| MvnI | CGCG | 2 cut(s) | 1095, 1107 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 756, 2777, 2882, 3122, 3503, 3554 |
| NciI | CCSGG | 1 cut(s) | 1435 |
| NcoI | CCATGG | 2 cut(s) | 2360, 2471 |
| NmeAIII | GCCGAG | 1 cut(s) | 3508 |
| NmuCI | GTSAC | 6 cut(s) | 1022, 1154, 1245, 2297, 2691, 3212 |
| NruI | TCGCGA | 1 cut(s) | 1107 |
| NsiI | ATGCAT | 2 cut(s) | 2358, 2862 |
| NspI | RCATGY | 2 cut(s) | 2356, 3004 |
| NspV | TTCGAA | 1 cut(s) | 323 |
| PaeR7I | CTCGAG | 1 cut(s) | 1188 |
| PagI | TCATGA | 2 cut(s) | 1171, 2593 |
| PciSI | GCTCTTC | 1 cut(s) | 3288 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 11, 320 |
| PctI | GAATGC | 1 cut(s) | 3163 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1480 |
| PflFI | GACNNNGTC | 2 cut(s) | 1875, 2641 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2225, 2366 |
| PkrI | GCNGC | 7 cut(s) | 548, 1094, 1265, 1466, 2199, 2878, 3096 |
| PleI | GAGTC | 8 cut(s) | 169, 450, 1019, 1411, 1884, 2539, 2677, 3586 |
| PpsI | GAGTC | 8 cut(s) | 169, 450, 1019, 1411, 1884, 2539, 2677, 3586 |
| PpuMI | RGGWCCY | 1 cut(s) | 2171 |
| PshBI | ATTAAT | 1 cut(s) | 2250 |
| Psp124BI | GAGCTC | 1 cut(s) | 1189 |
| Psp5II | RGGWCCY | 1 cut(s) | 2171 |
| Psp6I | CCWGG | 2 cut(s) | 2604, 3208 |
| PspFI | CCCAGC | 1 cut(s) | 2567 |
| PspGI | CCWGG | 2 cut(s) | 2604, 3208 |
| PspOMI | GGGCCC | 1 cut(s) | 2341 |
| PspPI | GGNCC | 8 cut(s) | 1018, 1575, 2102, 2171, 2341, 2342, 2643, 3515 |
| PspPPI | RGGWCCY | 1 cut(s) | 2171 |
| PsuI | RGATCY | 8 cut(s) | 962, 1301, 1424, 1736, 2455, 2608, 2848, 2965 |
| PsyI | GACNNNGTC | 2 cut(s) | 1875, 2641 |
| PvuII | CAGCTG | 1 cut(s) | 2633 |
| RruI | TCGCGA | 1 cut(s) | 1107 |
| RsaI | GTAC | 7 cut(s) | 53, 1055, 1520, 1631, 2481, 2795, 3625 |
| RsaNI | GTAC | 7 cut(s) | 52, 1054, 1519, 1630, 2480, 2794, 3624 |
| RseI | CAYNNNNRTG | 9 cut(s) | 840, 1002, 1038, 1062, 1176, 1254, 2226, 2449, 2487 |
| SacI | GAGCTC | 1 cut(s) | 1189 |
| SapI | GCTCTTC | 1 cut(s) | 3288 |
| SaqAI | TTAA | 8 cut(s) | 596, 896, 923, 1413, 2250, 2870, 2936, 3596 |
| SatI | GCNGC | 7 cut(s) | 547, 1093, 1264, 1465, 2198, 2877, 3095 |
| Sau96I | GGNCC | 8 cut(s) | 1018, 1575, 2102, 2171, 2341, 2342, 2643, 3515 |
| ScaI | AGTACT | 1 cut(s) | 53 |
| SchI | GAGTC | 8 cut(s) | 170, 451, 1019, 1412, 1885, 2539, 2678, 3587 |
| ScrFI | CCNGG | 3 cut(s) | 1435, 2606, 3210 |
| SduI | GDGCHC | 5 cut(s) | 270, 1189, 2065, 2345, 2446 |
| SfcI | CTRYAG | 1 cut(s) | 2649 |
| Sfr274I | CTCGAG | 1 cut(s) | 1188 |
| SfuI | TTCGAA | 1 cut(s) | 323 |
| SinI | GGWCC | 5 cut(s) | 1018, 1575, 2171, 2643, 3515 |
| SlaI | CTCGAG | 1 cut(s) | 1188 |
| SmiI | ATTTAAAT | 1 cut(s) | 597 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 840, 1002, 1038, 1062, 1176, 1254, 2226, 2449, 2487 |
| SmlI | CTYRAG | 1 cut(s) | 1188 |
| SmoI | CTYRAG | 1 cut(s) | 1188 |
| Sse9I | AATT | 9 cut(s) | 1495, 1960, 1990, 2089, 2274, 2715, 3306, 3466, 3591 |
| SspMI | CTAG | 8 cut(s) | 695, 735, 1356, 2058, 2312, 3098, 3276, 3356 |
| SstI | GAGCTC | 1 cut(s) | 1189 |
| StyD4I | CCNGG | 3 cut(s) | 1433, 2604, 3208 |
| StyI | CCWWGG | 4 cut(s) | 1355, 2105, 2360, 2471 |
| SwaI | ATTTAAAT | 1 cut(s) | 597 |
| TaiI | ACGT | 2 cut(s) | 1072, 2068 |
| TaqII | GACCGA | 2 cut(s) | 1173, 1888 |
| TasI | AATT | 9 cut(s) | 1495, 1960, 1990, 2089, 2274, 2715, 3306, 3466, 3591 |
| TatI | WGTACW | 6 cut(s) | 51, 1518, 1629, 2479, 2793, 3623 |
| TauI | GCSGC | 2 cut(s) | 549, 1095 |
| Tru1I | TTAA | 8 cut(s) | 596, 896, 923, 1413, 2250, 2870, 2936, 3596 |
| Tru9I | TTAA | 8 cut(s) | 596, 896, 923, 1413, 2250, 2870, 2936, 3596 |
| TscAI | CASTG | 7 cut(s) | 721, 1834, 2037, 2467, 2544, 2807, 3141 |
| TseFI | GTSAC | 6 cut(s) | 1022, 1154, 1245, 2297, 2691, 3212 |
| TseI | GCWGC | 5 cut(s) | 1263, 1464, 2197, 2876, 3094 |
| Tsp45I | GTSAC | 6 cut(s) | 1022, 1154, 1245, 2297, 2691, 3212 |
| TspGWI | ACGGA | 2 cut(s) | 619, 1853 |
| TspRI | CASTG | 7 cut(s) | 721, 1834, 2037, 2467, 2544, 2807, 3141 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1875, 2641 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2225, 2366 |
| VneI | GTGCAC | 2 cut(s) | 2061, 2442 |
| VpaK11BI | GGWCC | 5 cut(s) | 1018, 1575, 2171, 2643, 3515 |
| VspI | ATTAAT | 1 cut(s) | 2250 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2109 |
| XapI | RAATTY | 1 cut(s) | 1495 |
| XbaI | TCTAGA | 1 cut(s) | 694 |
| XceI | RCATGY | 2 cut(s) | 2356, 3004 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3256 |
| XhoI | CTCGAG | 1 cut(s) | 1188 |
| XmaJI | CCTAGG | 1 cut(s) | 1355 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1480 |
| XspI | CTAG | 8 cut(s) | 695, 735, 1356, 2058, 2312, 3098, 3276, 3356 |
| ZrmI | AGTACT | 1 cut(s) | 53 |
| Zsp2I | ATGCAT | 2 cut(s) | 2358, 2862 |