Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0007346

Physical Location & Seq

Genomic Coordinates Reverse (-)

66766778 .. 66773420

Gene Structure 6643 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G039190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2823 bp

ATGGATGGGGACAATAAGCACCGAGATGAAAAGCAAAGAGATGAGAAGCAAAGAGATGACCGCTCTACAAAAGATCATTTAAGTAGCAAGTCTGAGGATAAGCATTTAAGGGATGAAAAAGATATAAGTGATATGCAACAGAAGAGATCCAAGCTTCAGGATGGTGAGCGCAAAGGAGAGCATGACCGTGATCGCAATCGAGACCGTGACTCATATCATGTTCGTGAGCGTGAGCGGTACCATGACCGTGAACGTGAACATGGGTGGGATCATGGCCGCGACCGTGATCGCGATTATGATCGGGATTGGGACTGGGATCGTGAGAGGGATGGAGATCGTGACCGAGAGAGGAATCATGATCGCGAGCGAGCTCGAGACCGTGATAAAGATGGTGATCGAGATCGTGATCGTGAGTATGATCGGGACTACGATGGGTCACATCTTGATGATCGCAGCACAAGATATAAAGATAGTAGCAGAGGAAAGAGAAGATCTCCAGATGATCGTGATGATTCTACTGATACTAAATCCAGAGGTGTCAAACCTAGGTATTCTGACTTTGAAAAGAAGTCATCAAGTGGTGATAGGGTTGAGTCGGATGTTAACAAGGGAAGATCTCAGTCCCGGCAAGCTTATGTAGATACTATATTAAGCAGCAATAAACGAAGGACTTCTCCCAGTTCAAATTCAAATGCTGGCATAGATGAGTACAGGTATGCGAATCCAGAAGATATGAAGTATAGGGATTCTATGGCGGAGCAGAGGTCCAAAGCACTTCCTCCCAGAGATGTATCTGGAGTTTCGGAAAGAGGTTCCAAGTACAGGTCAATGGAGAAGTCCAGTAAAATGGACGATAGCCATTTAGGGGAGCTTTCAAATGAAAAACCTTCAGGTTCTAAGGCTTCACCAATGGCATTGATGGAAAGATCTCCTTCATCATCAAGTATTGACCGTAGATATATGAACAAAACTGCTGTCAGACGAAGTATTGACATTGAAGAAACAGGTCGGAGAAGCAGTGCTTCTATGGATAATAGAGATTTCTCTAATAGTGAGGATAGACCGAGTCGGGACTTAGCATTGGAGAAGCCCTTTGTGGATGATTCCTCCCCCGCTGATTCATCCACTCACACTAGAAGTGGTCAGAGTAATTTTTCTTCTTCGTTTGCTCCACATCCTAATTTCAGGGCTGGAGTTGAAAGCCCTTCCTTTGCTGGTTCAGTGGAAGACGACGGTAGAGTAAACTCTAGTGCACGTTATAGGAGGAGTAGTGATCCCAATTTGGTTAGAGGGCCTTGGAGAGGTGTCCCAAACTGGCCTTCACCAGTTCCAAATGGTTTTATGCCTTTCCCACACGGGGGACCTCATGTCGGTTTTCAAGGGATGCTGCCACAGTTTTCGGCTCCACCACATTTTGGTGTTAGACCTTCAATGGAGATTAATCATTATGCGATTCCTTATCAAATTGCTGATGATAGGTTTTCCGGTCACTTGCGCCCACTAGGGTCTCAGAACATTATGGAAGGTTTGGGCCCTTCTCACATGCATCCATGGGATGGGAGTACTGGAGCCTTTAGGGATGATTCTAACAGTTATGGGGCGGAATGGGATCAGAACAGGCATCCGATGAGTGCACGGGGATGGGATCCCAGTGCTGAGCCATGGAAAGTACATAACAATGATGTAAAAAGGGACTTGCCCTCCCCATCTCCCAGAAATGATTATCCAGTGCAGACCCCTGTGGATGATGGTGTAGCTGGGCAGGTAGGTCAGATGTCTCATCATGAAGATAACCTGGATCTTGGAGTTCATACTAAAACAGCTGAGACAAGGTCCACTATAGCTTCTCCTATGAAAGAGTCGCCTATAACTCGTGAGAAGTCACGGGATGGCTCTAAATCGGCAATTGATAAAGTCCCTTCTCTAAGTCATTATTATCTTTCCAAGCTTGACATTTCAGCAGAACTTACTCGTACTGAGTTGTACAGCCAGTGTATGAGCCTACTGGATACTGAGGGGAGTGCAACTGTTGATGAAGATCCTACTATGCATACGATATTAAAGGCTGCAACAGCAGGATTGAAATCGTCCAAAACATTATTGAGTTCCTCACTTTTTCCACCTTTAAAGGAATCTGTTTTTCAGAAAGCTATGGATCTTTACAAGAAGCAGAGGATGGAAGCAAAAGGCATGTCATTTGTTGCTGGTGGAAGATTGGATATTATTTTAGCATCAAATCAGAAGAACATGGAAGCAAAAATTTGTGAAGTGGAGAAAGTGGAGCAGCTAGTGTTGAAGTCTGATGCAGAAATGGTGGATGCTCCAGTGTCAAGTTCAGATGAGAAGAATGCTCTTGTTACTGTTTCAACAGATAGTGTCAAGGAGCTGGTTTCAACTCCTGGTCACGAGATGCAAAATCACATCTCTCTCGGTTCTCCCAAGTTGGAAATGGCAGTTGAAGATTCTAGTCAAGTTGAACCAGAAGAGCCTCAAACAATTCCAAATGGGGTGGAAATGGATTCAATGTCTTCAGAGCAGGAGAAACTAGAGGTGGATAATGCAGATGGTTTCTCGTTACTTGATAATAAAGCATCCCTTCCTACTAATACCACTTTACCTGCGGATGGCTACGGCGTGAACAAGGTCAAAGATGACTATTCTATTTATCATGCCGAGGAAGGCGTGGCTGTTGATGCAATAAGGGGTCCATTAGTAATACCAGATGGTTCCCCAAAGGCTTGTGAGGCTTTGATGTCTGGGTCTAATGAGTCTGATTCGGTAATTTTAAGTCGGATACATCATTCTCCTGAAAGTACACATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

940

Amino Acids

105.79

Weight (kDa)

5.65

Isoelectric Point (pI)

57.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007346)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53440 AT5G53440
fragaria_vesca	FvH4_7g31740 FvH4_7g31740 FvH4_7g31740
malus_domestica	MD01G1219900.v1.1 MD07G1290200.v1.1
prunus_persica	Prupe.2G311300_v2.0.a1 Prupe.2G311300_v2.0.a1 Prupe.2G311300_v2.0.a1
pyrus_communis	pycom01g22970 pycom01g22980 pycom07g26280
rosa_chinensis	RchiOBHm_Chr1g0380961
rosa_laevigata	RLG00000026256
rosa_multiflora	Rmu_sc0002962.1_g000023 Rmu_sc0031952.1_g000002
rosa_roxburghii	Rroxscaffold_4G00278900
rosa_rugosa	Rorug01G0425800 Rorug01G0425900
rosa_samantha	Rh1AG449900 Rh1BG405700 Rh1CG419700 Rh1DG436200
rosa_wichuraiana	Rw1G039190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1753, 2626
Acc65I	GGTACC	1 cut(s)	237
AccB1I	GGYRCC	1 cut(s)	237
AccB7I	CCANNNNNTGG	2 cut(s)	1415, 1556
AccBSI	CCGCTC	2 cut(s)	63, 235
AccII	CGCG	3 cut(s)	279, 291, 363
AciI	CCGC	7 cut(s)	61, 235, 277, 755, 1113, 1601, 2621
AcoI	YGGCCR	1 cut(s)	274
AcsI	RAATTY	2 cut(s)	685, 2259
AcuI	CTGAAG	3 cut(s)	140, 873, 2514
AfaI	GTAC	8 cut(s)	239, 710, 821, 1564, 1671, 1975, 1985, 2815
AfiI	CCNNNNNNNGG	9 cut(s)	822, 865, 1301, 1357, 1358, 1370, 1415, 1556, 2624
AhdI	GACNNNNNGTC	1 cut(s)	1367
AjnI	CCWGG	2 cut(s)	1794, 2398
AjuI	GAANNNNNNNTTGG	2 cut(s)	1303, 1335
Alw21I	GWGCWC	3 cut(s)	373, 1255, 1636
Alw26I	GTCTC	5 cut(s)	195, 369, 1512, 1782, 1820
Alw44I	GTGCAC	2 cut(s)	1251, 1632
Ama87I	CYCGRG	1 cut(s)	372
AoxI	GGCC	4 cut(s)	274, 1292, 1316, 1531
ApaI	GGGCCC	1 cut(s)	1535
ApaLI	GTGCAC	2 cut(s)	1251, 1632
ApeKI	GCWGC	5 cut(s)	453, 654, 1387, 2066, 2284
ApoI	RAATTY	2 cut(s)	685, 2259
ArsI	GACNNNNNNTTYG	4 cut(s)	960, 992, 2177, 2209
AseI	ATTAAT	1 cut(s)	1440
Asp700I	GAANNNNTTC	1 cut(s)	670
Asp718I	GGTACC	1 cut(s)	237
AspA2I	CCTAGG	1 cut(s)	545
AspLEI	GCGC	2 cut(s)	171, 1497
AspS9I	GGNCC	7 cut(s)	765, 1292, 1361, 1531, 1532, 1833, 2705
AsuC2I	CCSGG	1 cut(s)	625
AsuHPI	GGTGA	5 cut(s)	176, 404, 593, 897, 1314
AvaI	CYCGRG	1 cut(s)	372
AvaII	GGWCC	4 cut(s)	765, 1361, 1833, 2705
AvrII	CCTAGG	1 cut(s)	545
BaeGI	GKGCMC	3 cut(s)	1255, 1535, 1636
BamHI	GGATCC	1 cut(s)	1645
BanI	GGYRCC	1 cut(s)	237
BanII	GRGCYC	2 cut(s)	373, 1535
BarI	GAAGNNNNNNTAC	2 cut(s)	1141, 1173
BauI	CACGAG	2 cut(s)	1872, 2405
BbsI	GAAGAC	2 cut(s)	1233, 2520
Bbv12I	GWGCWC	3 cut(s)	373, 1255, 1636
BbvI	GCAGC	5 cut(s)	465, 666, 1374, 2053, 2296
BceAI	ACGGC	1 cut(s)	2647
BciT130I	CCWGG	2 cut(s)	1796, 2400
BciVI	GTATCC	2 cut(s)	2002, 2787
BcnI	CCSGG	1 cut(s)	625
BcoDI	GTCTC	5 cut(s)	195, 369, 1512, 1782, 1820
BfaI	CTAG	7 cut(s)	546, 1134, 1248, 1502, 2288, 2466, 2546
BfmI	CTRYAG	1 cut(s)	1839
BfuAI	ACCTGC	2 cut(s)	1753, 2626
BfuI	GTATCC	2 cut(s)	2002, 2787
BglII	AGATCT	3 cut(s)	491, 614, 926
BisI	GCNGC	6 cut(s)	277, 454, 655, 1388, 2067, 2285
BlnI	CCTAGG	1 cut(s)	545
BlpI	GCTNAGC	1 cut(s)	1656
BlsI	GCNGC	6 cut(s)	278, 455, 656, 1389, 2068, 2286
BmcAI	AGTACT	1 cut(s)	1564
Bme1390I	CCNGG	3 cut(s)	625, 1796, 2400
Bme18I	GGWCC	4 cut(s)	765, 1361, 1833, 2705
BmeRI	GACNNNNNGTC	1 cut(s)	1367
BmeT110I	CYCGRG	1 cut(s)	372
BmgT120I	GGNCC	7 cut(s)	765, 1292, 1361, 1531, 1532, 1833, 2705
BmiI	GGNNCC	9 cut(s)	239, 814, 1362, 1404, 1533, 1570, 1647, 2706, 2728
BmrFI	CCNGG	3 cut(s)	625, 1796, 2400
BmrI	ACTGGG	3 cut(s)	322, 672, 1644
BmsI	GCATC	9 cut(s)	1374, 1555, 1630, 2240, 2293, 2308, 2400, 2600, 2683
BmuI	ACTGGG	3 cut(s)	322, 672, 1644
BpiI	GAAGAC	2 cut(s)	1233, 2520
BplI	GAGNNNNNCTC	2 cut(s)	478, 510
BpmI	CTGGAG	5 cut(s)	480, 816, 1212, 1587, 2307
Bpu1102I	GCTNAGC	1 cut(s)	1656
BpuMI	CCSGG	1 cut(s)	625
BsaBI	GATNNNNATC	8 cut(s)	195, 297, 333, 393, 399, 405, 2037, 2083
BsaI	GGTCTC	3 cut(s)	195, 369, 1512
BsaJI	CCNNGG	5 cut(s)	545, 1295, 1550, 1661, 2673
BsaWI	WCCGGW	1 cut(s)	1484
BsaXI	ACNNNNNCTCC	8 cut(s)	749, 779, 1003, 1033, 1255, 1285, 1685, 1715
Bsc4I	CCNNNNNNNGG	9 cut(s)	822, 865, 1301, 1357, 1358, 1370, 1415, 1556, 2624
Bse8I	GATNNNNATC	8 cut(s)	195, 297, 333, 393, 399, 405, 2037, 2083
BseBI	CCWGG	2 cut(s)	1796, 2400
BseDI	CCNNGG	5 cut(s)	545, 1295, 1550, 1661, 2673
BseJI	GATNNNNATC	8 cut(s)	195, 297, 333, 393, 399, 405, 2037, 2083
BseLI	CCNNNNNNNGG	9 cut(s)	822, 865, 1301, 1357, 1358, 1370, 1415, 1556, 2624
BseMII	CTCAG	7 cut(s)	84, 632, 1523, 1647, 1815, 1968, 2004
BseRI	GAGGAG	1 cut(s)	1279
BseSI	GKGCMC	3 cut(s)	1255, 1535, 1636
BseXI	GCAGC	5 cut(s)	465, 666, 1374, 2053, 2296
BseYI	CCCAGC	1 cut(s)	1757
BsgI	GTGCAG	1 cut(s)	1751
Bsh1236I	CGCG	3 cut(s)	279, 291, 363
Bsh1285I	CGRYCG	1 cut(s)	283
BshFI	GGCC	4 cut(s)	276, 1294, 1318, 1533
BshNI	GGYRCC	1 cut(s)	237
BsiEI	CGRYCG	1 cut(s)	283
BsiHKAI	GWGCWC	3 cut(s)	373, 1255, 1636
BsiHKCI	CYCGRG	1 cut(s)	372
BsiSI	CCGG	2 cut(s)	625, 1485
BslFI	GGGAC	9 cut(s)	23, 323, 437, 607, 1085, 1292, 1374, 1706, 1901
BslI	CCNNNNNNNGG	9 cut(s)	822, 865, 1301, 1357, 1358, 1370, 1415, 1556, 2624
BsmAI	GTCTC	5 cut(s)	195, 369, 1512, 1782, 1820
BsmFI	GGGAC	9 cut(s)	23, 323, 437, 607, 1085, 1292, 1374, 1706, 1901
BsmI	GAATGC	1 cut(s)	2353
BsnI	GGCC	4 cut(s)	276, 1294, 1318, 1533
Bso31I	GGTCTC	3 cut(s)	195, 369, 1512
BsoBI	CYCGRG	1 cut(s)	372
Bsp120I	GGGCCC	1 cut(s)	1531
Bsp1286I	GDGCHC	4 cut(s)	373, 1255, 1535, 1636
Bsp1407I	TGTACA	1 cut(s)	1983
Bsp1720I	GCTNAGC	1 cut(s)	1656
Bsp19I	CCATGG	2 cut(s)	1550, 1661
Bsp68I	TCGCGA	2 cut(s)	291, 363
BspACI	CCGC	7 cut(s)	61, 235, 277, 755, 1113, 1601, 2621
BspANI	GGCC	4 cut(s)	276, 1294, 1318, 1533
BspCNI	CTCAG	7 cut(s)	85, 631, 1522, 1648, 1816, 1969, 2005
BspFNI	CGCG	3 cut(s)	279, 291, 363
BspHI	TCATGA	2 cut(s)	355, 1783
BspLI	GGNNCC	9 cut(s)	239, 814, 1362, 1404, 1533, 1570, 1647, 2706, 2728
BspMI	ACCTGC	2 cut(s)	1753, 2626
BspQI	GCTCTTC	1 cut(s)	2478
BspT107I	GGYRCC	1 cut(s)	237
BspTNI	GGTCTC	3 cut(s)	195, 369, 1512
BsrBI	CCGCTC	2 cut(s)	63, 235
BsrGI	TGTACA	1 cut(s)	1983
BssECI	CCNNGG	5 cut(s)	545, 1295, 1550, 1661, 2673
BssSI	CACGAG	2 cut(s)	1872, 2405
BssT1I	CCWWGG	4 cut(s)	545, 1295, 1550, 1661
Bst2BI	CACGAG	2 cut(s)	1872, 2405
Bst2UI	CCWGG	2 cut(s)	1796, 2400
Bst6I	CTCTTC	2 cut(s)	137, 2478
BstAUI	TGTACA	1 cut(s)	1983
BstC8I	GCNNGC	4 cut(s)	365, 369, 630, 697
BstDSI	CCRYGG	2 cut(s)	1550, 1661
BstENI	CCTNNNNNAGG	1 cut(s)	1299
BstFNI	CGCG	3 cut(s)	279, 291, 363
BstHHI	GCGC	2 cut(s)	171, 1497
BstMAI	GTCTC	5 cut(s)	195, 369, 1512, 1782, 1820
BstMCI	CGRYCG	1 cut(s)	283
BstMWI	GCNNNNNNNGC	3 cut(s)	2072, 2693, 2744
BstNI	CCWGG	2 cut(s)	1796, 2400
BstNSI	RCATGY	2 cut(s)	1546, 2194
BstSCI	CCNGG	3 cut(s)	623, 1794, 2398
BstSFI	CTRYAG	1 cut(s)	1839
BstSLI	GKGCMC	3 cut(s)	1255, 1535, 1636
BstUI	CGCG	3 cut(s)	279, 291, 363
BstV1I	GCAGC	5 cut(s)	465, 666, 1374, 2053, 2296
BstV2I	GAAGAC	2 cut(s)	1233, 2520
BstX2I	RGATCY	8 cut(s)	146, 491, 614, 926, 1645, 1798, 2038, 2155
BstXI	CCANNNNNNTGG	1 cut(s)	847
BstYI	RGATCY	8 cut(s)	146, 491, 614, 926, 1645, 1798, 2038, 2155
BsuI	GTATCC	2 cut(s)	2002, 2787
BsuRI	GGCC	4 cut(s)	276, 1294, 1318, 1533
BtgI	CCRYGG	2 cut(s)	1550, 1661
BtsI	GCAGTG	1 cut(s)	1024
BtsIMutI	CAGTG	6 cut(s)	1024, 1227, 1657, 1734, 1997, 2331
BtuMI	TCGCGA	2 cut(s)	291, 363
BveI	ACCTGC	2 cut(s)	1753, 2626
Cac8I	GCNNGC	4 cut(s)	365, 369, 630, 697
CciI	TCATGA	2 cut(s)	355, 1783
CfoI	GCGC	2 cut(s)	171, 1497
Cfr13I	GGNCC	7 cut(s)	765, 1292, 1361, 1531, 1532, 1833, 2705
Csp6I	GTAC	8 cut(s)	238, 709, 820, 1563, 1670, 1974, 1984, 2814
CspCI	CAANNNNNGTGG	2 cut(s)	2490, 2525
CviQI	GTAC	8 cut(s)	238, 709, 820, 1563, 1670, 1974, 1984, 2814
DraI	TTTAAA	1 cut(s)	2127
DriI	GACNNNNNGTC	1 cut(s)	1367
EaeI	YGGCCR	1 cut(s)	274
Eam1104I	CTCTTC	2 cut(s)	137, 2478
Eam1105I	GACNNNNNGTC	1 cut(s)	1367
EarI	CTCTTC	2 cut(s)	137, 2478
EciI	GGCGGA	2 cut(s)	770, 1616
Ecl136II	GAGCTC	1 cut(s)	371
Eco130I	CCWWGG	4 cut(s)	545, 1295, 1550, 1661
Eco24I	GRGCYC	2 cut(s)	373, 1535
Eco31I	GGTCTC	3 cut(s)	195, 369, 1512
Eco47I	GGWCC	4 cut(s)	765, 1361, 1833, 2705
Eco53kI	GAGCTC	1 cut(s)	371
Eco57I	CTGAAG	3 cut(s)	140, 873, 2514
Eco88I	CYCGRG	1 cut(s)	372
EcoICRI	GAGCTC	1 cut(s)	371
EcoNI	CCTNNNNNAGG	1 cut(s)	1299
EcoO109I	RGGNCCY	3 cut(s)	1292, 1361, 1532
EcoRII	CCWGG	2 cut(s)	1794, 2398
EcoT14I	CCWWGG	4 cut(s)	545, 1295, 1550, 1661
EcoT22I	ATGCAT	2 cut(s)	1548, 2052
EcoT38I	GRGCYC	2 cut(s)	373, 1535
ErhI	CCWWGG	4 cut(s)	545, 1295, 1550, 1661
FalI	AAGNNNNNCTT	6 cut(s)	916, 948, 1006, 1038, 2580, 2612
FaqI	GGGAC	9 cut(s)	23, 323, 437, 607, 1085, 1292, 1374, 1706, 1901
FauI	CCCGC	1 cut(s)	1120
Fnu4HI	GCNGC	6 cut(s)	277, 454, 655, 1388, 2067, 2285
FriOI	GRGCYC	2 cut(s)	373, 1535
Fsp4HI	GCNGC	6 cut(s)	277, 454, 655, 1388, 2067, 2285
FspBI	CTAG	7 cut(s)	546, 1134, 1248, 1502, 2288, 2466, 2546
GlaI	GCGC	2 cut(s)	170, 1496
GluI	GCNGC	6 cut(s)	277, 454, 655, 1388, 2067, 2285
GsaI	CCCAGC	1 cut(s)	1761
GsuI	CTGGAG	5 cut(s)	480, 816, 1212, 1587, 2307
HaeIII	GGCC	4 cut(s)	276, 1294, 1318, 1533
HapII	CCGG	2 cut(s)	625, 1485
HhaI	GCGC	2 cut(s)	171, 1497
Hin6I	GCGC	2 cut(s)	169, 1495
HinP1I	GCGC	2 cut(s)	169, 1495
HincII	GTYRAC	1 cut(s)	604
HindII	GTYRAC	1 cut(s)	604
HindIII	AAGCTT	3 cut(s)	152, 630, 1946
HpaI	GTTAAC	1 cut(s)	604
HpaII	CCGG	2 cut(s)	625, 1485
HphI	GGTGA	5 cut(s)	176, 404, 593, 897, 1314
Hpy166II	GTNNAC	9 cut(s)	251, 257, 604, 1243, 1253, 1634, 1836, 2638, 2816
Hpy8I	GTNNAC	9 cut(s)	251, 257, 604, 1243, 1253, 1634, 1836, 2638, 2816
Hpy99I	CGWCG	1 cut(s)	1235
HpyCH4IV	ACGT	2 cut(s)	253, 1255
HpyF10VI	GCNNNNNNNGC	3 cut(s)	2072, 2693, 2744
HpySE526I	ACGT	2 cut(s)	253, 1255
HspAI	GCGC	2 cut(s)	169, 1495
KpnI	GGTACC	1 cut(s)	241
KspAI	GTTAAC	1 cut(s)	604
LguI	GCTCTTC	1 cut(s)	2478
LmnI	GCTCC	8 cut(s)	757, 868, 1174, 1408, 1568, 2281, 2326, 2383
Lsp1109I	GCAGC	5 cut(s)	465, 666, 1374, 2053, 2296
LweI	GCATC	9 cut(s)	1374, 1555, 1630, 2240, 2293, 2308, 2400, 2600, 2683
MaeI	CTAG	7 cut(s)	546, 1134, 1248, 1502, 2288, 2466, 2546
MaeII	ACGT	2 cut(s)	253, 1255
MaeIII	GTNAC	8 cut(s)	206, 338, 435, 1487, 1881, 2356, 2402, 2574
MbiI	CCGCTC	2 cut(s)	63, 235
MfeI	CAATTG	1 cut(s)	1905
MflI	RGATCY	8 cut(s)	146, 491, 614, 926, 1645, 1798, 2038, 2155
MhlI	GDGCHC	4 cut(s)	373, 1255, 1535, 1636
MluCI	AATT	9 cut(s)	685, 1150, 1180, 1279, 1464, 1905, 2259, 2496, 2781
MlyI	GAGTC	5 cut(s)	203, 602, 1075, 1868, 2777
MmeI	TCCRAC	4 cut(s)	576, 989, 2424, 2771
Mph1103I	ATGCAT	2 cut(s)	1548, 2052
MroXI	GAANNNNTTC	1 cut(s)	670
MseI	TTAA	8 cut(s)	80, 107, 603, 650, 1440, 2060, 2126, 2786
MslI	CAYNNNNRTG	8 cut(s)	24, 186, 222, 246, 444, 1416, 1639, 1677
MspA1I	CMGCKG	2 cut(s)	1115, 1823
MspI	CCGG	2 cut(s)	625, 1485
MspR9I	CCNGG	3 cut(s)	625, 1796, 2400
MunI	CAATTG	1 cut(s)	1905
Mva1269I	GAATGC	1 cut(s)	2353
MvaI	CCWGG	2 cut(s)	1796, 2400
MvnI	CGCG	3 cut(s)	279, 291, 363
MwoI	GCNNNNNNNGC	3 cut(s)	2072, 2693, 2744
NciI	CCSGG	1 cut(s)	625
NcoI	CCATGG	2 cut(s)	1550, 1661
NlaIV	GGNNCC	9 cut(s)	239, 814, 1362, 1404, 1533, 1570, 1647, 2706, 2728
NmeAIII	GCCGAG	1 cut(s)	2698
NmuCI	GTSAC	6 cut(s)	206, 338, 435, 1487, 1881, 2402
NruI	TCGCGA	2 cut(s)	291, 363
NsiI	ATGCAT	2 cut(s)	1548, 2052
NspI	RCATGY	2 cut(s)	1546, 2194
PaeR7I	CTCGAG	1 cut(s)	372
PagI	TCATGA	2 cut(s)	355, 1783
PciSI	GCTCTTC	1 cut(s)	2478
PctI	GAATGC	1 cut(s)	2353
PdmI	GAANNNNTTC	1 cut(s)	670
PflFI	GACNNNGTC	2 cut(s)	1065, 1831
PflMI	CCANNNNNTGG	2 cut(s)	1415, 1556
PkrI	GCNGC	6 cut(s)	278, 455, 656, 1389, 2068, 2286
PleI	GAGTC	5 cut(s)	203, 601, 1074, 1867, 2776
PpsI	GAGTC	5 cut(s)	203, 601, 1074, 1867, 2776
PpuMI	RGGWCCY	1 cut(s)	1361
PshBI	ATTAAT	1 cut(s)	1440
Psp124BI	GAGCTC	1 cut(s)	373
Psp5II	RGGWCCY	1 cut(s)	1361
Psp6I	CCWGG	2 cut(s)	1794, 2398
PspFI	CCCAGC	1 cut(s)	1757
PspGI	CCWGG	2 cut(s)	1794, 2398
PspN4I	GGNNCC	9 cut(s)	239, 814, 1362, 1404, 1533, 1570, 1647, 2706, 2728
PspOMI	GGGCCC	1 cut(s)	1531
PspPI	GGNCC	7 cut(s)	765, 1292, 1361, 1531, 1532, 1833, 2705
PspPPI	RGGWCCY	1 cut(s)	1361
PsuI	RGATCY	8 cut(s)	146, 491, 614, 926, 1645, 1798, 2038, 2155
PsyI	GACNNNGTC	2 cut(s)	1065, 1831
PvuII	CAGCTG	1 cut(s)	1823
RruI	TCGCGA	2 cut(s)	291, 363
RsaI	GTAC	8 cut(s)	239, 710, 821, 1564, 1671, 1975, 1985, 2815
RsaNI	GTAC	8 cut(s)	238, 709, 820, 1563, 1670, 1974, 1984, 2814
RseI	CAYNNNNRTG	8 cut(s)	24, 186, 222, 246, 444, 1416, 1639, 1677
SacI	GAGCTC	1 cut(s)	373
SapI	GCTCTTC	1 cut(s)	2478
SaqAI	TTAA	8 cut(s)	80, 107, 603, 650, 1440, 2060, 2126, 2786
SatI	GCNGC	6 cut(s)	277, 454, 655, 1388, 2067, 2285
Sau96I	GGNCC	7 cut(s)	765, 1292, 1361, 1531, 1532, 1833, 2705
ScaI	AGTACT	1 cut(s)	1564
SchI	GAGTC	5 cut(s)	203, 602, 1075, 1868, 2777
ScrFI	CCNGG	3 cut(s)	625, 1796, 2400
SduI	GDGCHC	4 cut(s)	373, 1255, 1535, 1636
SfaNI	GCATC	9 cut(s)	1374, 1555, 1630, 2240, 2293, 2308, 2400, 2600, 2683
SfcI	CTRYAG	1 cut(s)	1839
Sfr274I	CTCGAG	1 cut(s)	372
SinI	GGWCC	4 cut(s)	765, 1361, 1833, 2705
SlaI	CTCGAG	1 cut(s)	372
SmiMI	CAYNNNNRTG	8 cut(s)	24, 186, 222, 246, 444, 1416, 1639, 1677
SmlI	CTYRAG	1 cut(s)	372
SmoI	CTYRAG	1 cut(s)	372
Sse9I	AATT	9 cut(s)	685, 1150, 1180, 1279, 1464, 1905, 2259, 2496, 2781
SsiI	CCGC	7 cut(s)	61, 235, 277, 755, 1113, 1601, 2621
SspMI	CTAG	7 cut(s)	546, 1134, 1248, 1502, 2288, 2466, 2546
SstI	GAGCTC	1 cut(s)	373
StyD4I	CCNGG	3 cut(s)	623, 1794, 2398
StyI	CCWWGG	4 cut(s)	545, 1295, 1550, 1661
TaiI	ACGT	2 cut(s)	256, 1258
TaqI	TCGA	3 cut(s)	199, 373, 397
TaqII	GACCGA	2 cut(s)	357, 1078
TasI	AATT	9 cut(s)	685, 1150, 1180, 1279, 1464, 1905, 2259, 2496, 2781
TatI	WGTACW	6 cut(s)	708, 819, 1562, 1669, 1983, 2813
TauI	GCSGC	1 cut(s)	279
Tru1I	TTAA	8 cut(s)	80, 107, 603, 650, 1440, 2060, 2126, 2786
Tru9I	TTAA	8 cut(s)	80, 107, 603, 650, 1440, 2060, 2126, 2786
TscAI	CASTG	6 cut(s)	1024, 1227, 1657, 1734, 1997, 2331
TseFI	GTSAC	6 cut(s)	206, 338, 435, 1487, 1881, 2402
TseI	GCWGC	5 cut(s)	453, 654, 1387, 2066, 2284
Tsp45I	GTSAC	6 cut(s)	206, 338, 435, 1487, 1881, 2402
TspRI	CASTG	6 cut(s)	1024, 1227, 1657, 1734, 1997, 2331
Tth111I	GACNNNGTC	2 cut(s)	1065, 1831
Van91I	CCANNNNNTGG	2 cut(s)	1415, 1556
VneI	GTGCAC	2 cut(s)	1251, 1632
VpaK11BI	GGWCC	4 cut(s)	765, 1361, 1833, 2705
VspI	ATTAAT	1 cut(s)	1440
XagI	CCTNNNNNAGG	1 cut(s)	1299
XapI	RAATTY	2 cut(s)	685, 2259
XceI	RCATGY	2 cut(s)	1546, 2194
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2446
XhoI	CTCGAG	1 cut(s)	372
XmaJI	CCTAGG	1 cut(s)	545
XmnI	GAANNNNTTC	1 cut(s)	670
XspI	CTAG	7 cut(s)	546, 1134, 1248, 1502, 2288, 2466, 2546
ZrmI	AGTACT	1 cut(s)	1564
Zsp2I	ATGCAT	2 cut(s)	1548, 2052

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.