Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0007346

Physical Location & Seq

Genomic Coordinates Forward (+)

20407145 .. 20411105

Gene Structure 3961 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g22980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3072 bp

ATGATCGTGATCGTGATCGCAATAGGGACCGTGACTCATATCATGTCCGCGATCGCGACCGCTACCATGATCGTGAACGCGAACATGGGTGGGATCATGGTCGTGACCGTGATTATGATCGTGATTGGGATTGGGACCGTGAGCGGGAGCGAGATGGGGACCACGAGCGAGACCGCAATCATGACCGTGATAGAGATGGTGATCGAGATCGCGATAGGGATTATGACCGGGACTATGACGGGTCACATATTGATGATCGCAGCACGAGATACAAAGATAGTAGCAGGGGAAAGAAAAGATTTCCGGATCGATCGTGATGATGGTTGTGATAAATCCAGAGGTATGAAAGCTCGGTACTCTGACTTGGAAAAAAAGTCATCCAGTGGTGATAGAGTTGAGTCAGATGCTAATAAGGGAAGATCTCAGTCGCGGCAAGCTTATGTAGACACTAAATTGAGTGTCAATAAACGCAGGACTTCCCTCGTTTCTAATTCACATGGTGGCATAGATGAGTACAGGTATCTAAATTCAGAAGATTTGAAATATAGGGATTCTGGAGTAGAGCATAGGTCCAAGGCAATGCCTCCCAAAGATGGTTCTGGTCCCACTGGAGTTTCAGAAAGAGGTTCCAAGTACAGATCCATGGAGAAACCCAATAAAATGGATGATGGCCATTTAGGCGAGCTGTCAAATGACAAGTCTTCCAGTTCCAAGGCTTCACCCCTGCCCTTGATGGAAAGGTCTCCTTCATCATCAAGTATTGACCGCAGGTACGTGAACAGAACTGGTGTCAGACGAAGTCTTGACATTGAAGAAACAGGTCGAAGAAGCAGCGCTTCCGTGGACAACAGAGATTTCTCTAATACTGAGGATAGACTGGGTCGGGACCTACCGTCAGAGAAGCCTTTGGCAGATGAGTCATCCCCACCTGATTCGTCAACTAATAATAGAAGTAATCAGAGTAATTTATCTTCTTTGTATCCCCCTCACCCCAATTTTAGGGTCGGAGTTGACAGCCCTTTTATTGGTTCAATGGAAGAAGAAGGTAGAGGTAACTCCAATGCACGTTACAGGAGGGGTAGTGATCCCAATTTGGTTCGAGGGCATGGTAATGCATGGAGGGGTGTCCCAAGCTGGAATTCACCAGTTCCAAATGGCTTCATGCATTTCCAACATGGGGCACCTCACGGTGGTTTTCAAGGGATGCTACCACAGTTTCCAGCTCCACCAATTTTTGGTGTTAGACCTTCAATGGATATTAACCACTCTGGGATGCCTTATCATATGCCTGACGCTGAGAGATTTTCCAATCACTTGCGGCCACTTGGGTGGCAGAATATGATGGATGGTTCAGGTCCTTCTCACTTGCATCTATGGGATGGGAGTAATGGTGCCTTTAGGGATGAGACTCACATGTATGGGGGTGCCGAATGGGATCAAAGCAGGCATCCAATGAATGCTCGCGGATGGGAATCTGGTGGTGAGACATGGAAAGTACATAACAATGATGTGAAAAGGGACTTGCCTTCCCCACCACAGAAAGATGATTATCTTGTGCAGGCTGCCATGGATGATGCTGTGGCTGGGAAGACAGGTCAGATGTCTCTCCATGAGGATAACCTGGATCTTGGAGTTTCTAAAACCGTTGAAAGAAGGTCCACTGTGACCTCTCCTTTAAAGGAGCCTATGCCTAAAAGTAGTCATGAGAAGTCACCTGGCCGCTCTAAATTTCAGAGTGATGATGTCCTCTCATTAAGTCATTATTATCTTTCCAAGCTTGACATTTCATCAGAACTTGCTCATCCCGAGGTTTATAGCCAGTGTATGAGCATACTGGATGGTGAACGAAGTGCAACTGTTGATGAAGATGCTACTACACATACAATTTTGGAGGGTGTAAGAGCAGGATTGAAATCGTCCAGAACCTTATTAAGTTCCTCACTTTTTCCTCCTTTGAAAGATTTTGTCTTTCAGAAAGCGATGAATCTTTACAAGAAGCAGAGGATGGAAACTATAGGATTGCCAATTATTGCCGGAGGAGCATTGGATATTATTTTAGCATCTGATCTGGAGAATATGGAATCAAAAGACCGTTGTGGTGTGGAGAAAGTAGAGGGAGTAGTCCTGACTTCTGATGCAGAAATGGAAGGTGCTCCTGTCTTGACTTCTGATGTAGGAATGGCAGATGCTCCTCTTGGCACTGCATTGGGTGATGGTGCTGAGAACCTGGAGGTACCAGTTTCATCTCCGGATCACGAGGTGCAGAACGACACATGCGACCCTTCTCCTATTTTGGAAATGGCAGCTGGAGATAATGGTGGAAGCAAACCAGGAGATCCCCAAACAATTCCAAATGCGGTGGAAATAGAATCCTCGGAGCAGGTGAAATTAGATGTTGGCGATGCAAATGGTCTCTCATCACCTGGTATCGAGTCTCTTGCTACCACCACTTTACCTGCAGCTGCTAACGACAATGTGATTAGCAAGACTAAAGATGATAATCCAATTGATCAGGCTTCTACCGAAGGTGCGGCTGATGCAGTAACTGGTCCTTTAATAATACCCGAGGGTTCCCAAAAGGCTTGTGGGGCTTTGATGCCGGGGTCTAATGAGTCTGATTCGAGTTCTGATGTAGTCATCTGCTCCGCCTTCGTTTTCATCCTTGTCGAGAGCCCCAGATTCATCGGGCATGGACTTGAGGATCACATAAGCTTTGTCGTCCTGATAATCGCGAAGCCTGACAAGAACGATATCATCTGCTGCAATCCAAACCTTCTTGTGCATCGTTCTGCGGATGCGACAAAGTCGCTTCTTCCCAGCAATGCGCATGGCTTCACACCGGCCATTACCAAACATTCGGAGCACTTGGGCATACTCCTGTCCATCTTTCTTAAAGAAAAGCTCACCTTTTCGTCACCAGCCTCGTTCTTGCCTCTCTTCCTGTTCTTTCCTCTCTTACCCTTGTTCCTCGGCATGATTACTAGCTCTGTTTCTCTGCTTTGCGAAGGGGCGAAACTTGCAGGTGGATTGGATTCGATGGAGGAGCACAATACAAGCAATAACGAGCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1024

Amino Acids

110.36

Weight (kDa)

5.31

Isoelectric Point (pI)

50.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007346)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G53440 AT5G53440
fragaria_vesca	FvH4_7g31740 FvH4_7g31740 FvH4_7g31740
malus_domestica	MD01G1219900.v1.1 MD07G1290200.v1.1
prunus_persica	Prupe.2G311300_v2.0.a1 Prupe.2G311300_v2.0.a1 Prupe.2G311300_v2.0.a1
pyrus_communis	pycom01g22970 pycom01g22980 pycom07g26280
rosa_chinensis	RchiOBHm_Chr1g0380961
rosa_laevigata	RLG00000026256
rosa_multiflora	Rmu_sc0002962.1_g000023 Rmu_sc0031952.1_g000002
rosa_roxburghii	Rroxscaffold_4G00278900
rosa_rugosa	Rorug01G0425800 Rorug01G0425900
rosa_samantha	Rh1AG449900 Rh1BG405700 Rh1CG419700 Rh1DG436200
rosa_wichuraiana	Rw1G039190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	2371, 3011
Acc16I	TGCGCA	1 cut(s)	2826
Acc36I	ACCTGC	4 cut(s)	759, 2371, 2464, 3011
Acc65I	GGTACC	1 cut(s)	2233
AccB1I	GGYRCC	4 cut(s)	1180, 1391, 1424, 2233
AccB7I	CCANNNNNTGG	1 cut(s)	1235
AccBSI	CCGCTC	2 cut(s)	144, 1722
AccI	GTMKAC	1 cut(s)	444
AccII	CGCG	7 cut(s)	50, 56, 80, 212, 430, 1464, 2732
AccIII	TCCGGA	2 cut(s)	303, 2248
AclWI	GGATC	9 cut(s)	101, 314, 633, 1079, 1443, 1632, 2259, 2330, 2709
AcoI	YGGCCR	4 cut(s)	670, 1319, 1717, 2841
AcsI	RAATTY	3 cut(s)	526, 1138, 1727
AdeI	CACNNNGTG	2 cut(s)	500, 2260
AfaI	GTAC	6 cut(s)	356, 515, 635, 773, 1497, 2235
AfeI	AGCGCT	1 cut(s)	835
AfiI	CCNNNNNNNGG	7 cut(s)	144, 593, 999, 1025, 1177, 1190, 1235
AflIII	ACRYGT	1 cut(s)	1413
AgsI	TTSAA	8 cut(s)	541, 812, 1032, 1199, 1251, 1649, 1912, 1957
AhdI	GACNNNNNGTC	1 cut(s)	892
AjnI	CCWGG	5 cut(s)	1620, 1714, 2226, 2329, 2422
AjuI	GAANNNNNNNTTGG	2 cut(s)	1123, 1155
AleI	CACNNNNGTG	1 cut(s)	1327
Alw21I	GWGCWC	3 cut(s)	2155, 2865, 3048
Alw26I	GTCTC	7 cut(s)	164, 747, 1400, 1478, 1608, 2417, 2439
AlwI	GGATC	9 cut(s)	101, 314, 633, 1079, 1443, 1632, 2259, 2330, 2709
AlwNI	CAGNNNCTG	1 cut(s)	2546
Ama87I	CYCGRG	2 cut(s)	1805, 2564
Aor13HI	TCCGGA	2 cut(s)	303, 2248
Aor51HI	AGCGCT	1 cut(s)	835
AoxI	GGCC	4 cut(s)	670, 1319, 1717, 2841
ApeKI	GCWGC	7 cut(s)	260, 831, 1562, 2303, 2459, 2462, 2760
ApoI	RAATTY	3 cut(s)	526, 1138, 1727
ArsI	GACNNNNNNTTYG	2 cut(s)	683, 715
AsiSI	GCGATCGC	1 cut(s)	54
Asp718I	GGTACC	1 cut(s)	2233
AspLEI	GCGC	2 cut(s)	836, 2827
AspS9I	GGNCC	9 cut(s)	27, 135, 159, 570, 602, 886, 1355, 1656, 2549
AsuC2I	CCSGG	2 cut(s)	229, 2601
AvaI	CYCGRG	2 cut(s)	1805, 2564
AvaII	GGWCC	9 cut(s)	27, 135, 159, 570, 602, 886, 1355, 1656, 2549
BaeGI	GKGCMC	1 cut(s)	1183
BalI	TGGCCA	1 cut(s)	672
BanI	GGYRCC	4 cut(s)	1180, 1391, 1424, 2233
BanII	GRGCYC	1 cut(s)	2675
BarI	GAAGNNNNNNTAC	2 cut(s)	955, 987
BauI	CACGAG	3 cut(s)	163, 264, 2255
BbsI	GAAGAC	2 cut(s)	693, 1595
Bbv12I	GWGCWC	3 cut(s)	2155, 2865, 3048
BbvI	GCAGC	7 cut(s)	272, 843, 1549, 2315, 2449, 2471, 2747
BcgI	CGANNNNNNTGC	2 cut(s)	2420, 2454
BciT130I	CCWGG	5 cut(s)	1622, 1716, 2228, 2331, 2424
BciVI	GTATCC	1 cut(s)	990
BclI	TGATCA	1 cut(s)	2509
BcnI	CCSGG	2 cut(s)	229, 2601
BcoDI	GTCTC	7 cut(s)	164, 747, 1400, 1478, 1608, 2417, 2439
BfaI	CTAG	1 cut(s)	2982
BfmI	CTRYAG	2 cut(s)	2013, 2457
BfoI	RGCGCY	1 cut(s)	837
BfuAI	ACCTGC	4 cut(s)	759, 2371, 2464, 3011
BfuI	GTATCC	1 cut(s)	990
BglI	GCCNNNNNGGC	1 cut(s)	678
BglII	AGATCT	1 cut(s)	419
Bme1390I	CCNGG	7 cut(s)	229, 1622, 1716, 2228, 2331, 2424, 2601
Bme18I	GGWCC	9 cut(s)	27, 135, 159, 570, 602, 886, 1355, 1656, 2549
BmeRI	GACNNNNNGTC	1 cut(s)	892
BmeT110I	CYCGRG	2 cut(s)	1805, 2564
BmgT120I	GGNCC	9 cut(s)	27, 135, 159, 570, 602, 886, 1355, 1656, 2549
BmrFI	CCNGG	7 cut(s)	229, 1622, 1716, 2228, 2331, 2424, 2601
BmrI	ACTGGG	1 cut(s)	887
BmuI	ACTGGG	1 cut(s)	887
BpiI	GAAGAC	2 cut(s)	693, 1595
BpmI	CTGGAG	5 cut(s)	576, 630, 2090, 2249, 2328
BpuEI	CTTGAG	1 cut(s)	2717
BpuMI	CCSGG	2 cut(s)	229, 2601
Bsa29I	ATCGAT	1 cut(s)	309
BsaAI	YACGTR	1 cut(s)	775
BsaBI	GATNNNNATC	9 cut(s)	8, 14, 116, 200, 206, 1471, 1548, 1912, 2499
BsaI	GGTCTC	3 cut(s)	164, 747, 2417
BsaWI	WCCGGW	2 cut(s)	303, 2248
BsaXI	ACNNNNNCTCC	4 cut(s)	1066, 1096, 1375, 1405
Bsc4I	CCNNNNNNNGG	7 cut(s)	144, 593, 999, 1025, 1177, 1190, 1235
Bse118I	RCCGGY	1 cut(s)	2839
Bse3DI	GCAATG	2 cut(s)	585, 2827
Bse8I	GATNNNNATC	9 cut(s)	8, 14, 116, 200, 206, 1471, 1548, 1912, 2499
BseAI	TCCGGA	2 cut(s)	303, 2248
BseBI	CCWGG	5 cut(s)	1622, 1716, 2228, 2331, 2424
BseCI	ATCGAT	1 cut(s)	309
BseJI	GATNNNNATC	9 cut(s)	8, 14, 116, 200, 206, 1471, 1548, 1912, 2499
BseLI	CCNNNNNNNGG	7 cut(s)	144, 593, 999, 1025, 1177, 1190, 1235
BseMI	GCAATG	2 cut(s)	585, 2827
BseMII	CTCAG	4 cut(s)	437, 858, 1287, 2211
BseRI	GAGGAG	3 cut(s)	2052, 2181, 3056
BseSI	GKGCMC	1 cut(s)	1183
BseXI	GCAGC	7 cut(s)	272, 843, 1549, 2315, 2449, 2471, 2747
BseYI	CCCAGC	2 cut(s)	1583, 2816
BsgI	GTGCAG	2 cut(s)	1577, 2282
Bsh1236I	CGCG	7 cut(s)	50, 56, 80, 212, 430, 1464, 2732
Bsh1285I	CGRYCG	3 cut(s)	54, 60, 313
BshFI	GGCC	4 cut(s)	672, 1321, 1719, 2843
BshNI	GGYRCC	4 cut(s)	1180, 1391, 1424, 2233
BshVI	ATCGAT	1 cut(s)	309
BsiEI	CGRYCG	3 cut(s)	54, 60, 313
BsiHKAI	GWGCWC	3 cut(s)	2155, 2865, 3048
BsiHKCI	CYCGRG	2 cut(s)	1805, 2564
BsiSI	CCGG	6 cut(s)	228, 304, 2034, 2249, 2600, 2840
BslFI	GGGAC	8 cut(s)	40, 148, 172, 244, 588, 899, 1112, 1532
BslI	CCNNNNNNNGG	7 cut(s)	144, 593, 999, 1025, 1177, 1190, 1235
BsmAI	GTCTC	7 cut(s)	164, 747, 1400, 1478, 1608, 2417, 2439
BsmFI	GGGAC	8 cut(s)	40, 148, 172, 244, 588, 899, 1112, 1532
BsmI	GAATGC	1 cut(s)	1462
BsnI	GGCC	4 cut(s)	672, 1321, 1719, 2843
Bso31I	GGTCTC	3 cut(s)	164, 747, 2417
BsoBI	CYCGRG	2 cut(s)	1805, 2564
Bsp1286I	GDGCHC	5 cut(s)	1183, 2155, 2675, 2865, 3048
Bsp13I	TCCGGA	2 cut(s)	303, 2248
Bsp19I	CCATGG	2 cut(s)	642, 1566
Bsp68I	TCGCGA	3 cut(s)	56, 212, 2732
BspANI	GGCC	4 cut(s)	672, 1321, 1719, 2843
BspCNI	CTCAG	4 cut(s)	436, 859, 1288, 2212
BspDI	ATCGAT	1 cut(s)	309
BspEI	TCCGGA	2 cut(s)	303, 2248
BspFNI	CGCG	7 cut(s)	50, 56, 80, 212, 430, 1464, 2732
BspHI	TCATGA	2 cut(s)	180, 1702
BspMAI	CTGCAG	1 cut(s)	2461
BspMI	ACCTGC	4 cut(s)	759, 2371, 2464, 3011
BspPI	GGATC	9 cut(s)	101, 314, 633, 1079, 1443, 1632, 2259, 2330, 2709
BspT107I	GGYRCC	4 cut(s)	1180, 1391, 1424, 2233
BspTNI	GGTCTC	3 cut(s)	164, 747, 2417
BsrBI	CCGCTC	2 cut(s)	144, 1722
BsrDI	GCAATG	2 cut(s)	585, 2827
BsrFI	RCCGGY	1 cut(s)	2839
BssAI	RCCGGY	1 cut(s)	2839
BssSI	CACGAG	3 cut(s)	163, 264, 2255
BssT1I	CCWWGG	4 cut(s)	573, 642, 711, 1566
Bst2BI	CACGAG	3 cut(s)	163, 264, 2255
Bst2UI	CCWGG	5 cut(s)	1622, 1716, 2228, 2331, 2424
Bst6I	CTCTTC	1 cut(s)	2942
BstBAI	YACGTR	1 cut(s)	775
BstC8I	GCNNGC	5 cut(s)	435, 683, 1445, 1462, 1560
BstDEI	CTNAG	4 cut(s)	423, 867, 1296, 2220
BstDSI	CCRYGG	3 cut(s)	642, 840, 1566
BstFNI	CGCG	7 cut(s)	50, 56, 80, 212, 430, 1464, 2732
BstH2I	RGCGCY	1 cut(s)	837
BstHHI	GCGC	2 cut(s)	836, 2827
BstMAI	GTCTC	7 cut(s)	164, 747, 1400, 1478, 1608, 2417, 2439
BstMCI	CGRYCG	3 cut(s)	54, 60, 313
BstMWI	GCNNNNNNNGC	5 cut(s)	678, 2039, 2537, 2588, 3017
BstNI	CCWGG	5 cut(s)	1622, 1716, 2228, 2331, 2424
BstNSI	RCATGY	2 cut(s)	1417, 2277
BstSCI	CCNGG	7 cut(s)	227, 1620, 1714, 2226, 2329, 2422, 2599
BstSFI	CTRYAG	2 cut(s)	2013, 2457
BstSLI	GKGCMC	1 cut(s)	1183
BstUI	CGCG	7 cut(s)	50, 56, 80, 212, 430, 1464, 2732
BstV1I	GCAGC	7 cut(s)	272, 843, 1549, 2315, 2449, 2471, 2747
BstV2I	GAAGAC	2 cut(s)	693, 1595
BstX2I	RGATCY	4 cut(s)	419, 638, 1624, 2335
BstXI	CCANNNNNNTGG	2 cut(s)	661, 1329
BstYI	RGATCY	4 cut(s)	419, 638, 1624, 2335
Bsu15I	ATCGAT	1 cut(s)	309
BsuI	GTATCC	1 cut(s)	990
BsuRI	GGCC	4 cut(s)	672, 1321, 1719, 2843
BsuTUI	ATCGAT	1 cut(s)	309
BtgI	CCRYGG	3 cut(s)	642, 840, 1566
BtgZI	GCGATG	2 cut(s)	1994, 2415
BtsI	GCAGTG	1 cut(s)	2199
BtsIMutI	CAGTG	5 cut(s)	388, 606, 1659, 1826, 2199
BtuMI	TCGCGA	3 cut(s)	56, 212, 2732
BveI	ACCTGC	4 cut(s)	759, 2371, 2464, 3011
Cac8I	GCNNGC	5 cut(s)	435, 683, 1445, 1462, 1560
CaiI	CAGNNNCTG	1 cut(s)	2546
CciI	TCATGA	2 cut(s)	180, 1702
CfoI	GCGC	2 cut(s)	836, 2827
Cfr10I	RCCGGY	1 cut(s)	2839
Cfr13I	GGNCC	9 cut(s)	27, 135, 159, 570, 602, 886, 1355, 1656, 2549
ClaI	ATCGAT	1 cut(s)	309
CseI	GACGC	1 cut(s)	1301
CsiI	ACCWGGT	1 cut(s)	2422
Csp6I	GTAC	6 cut(s)	355, 514, 634, 772, 1496, 2234
CspCI	CAANNNNNGTGG	2 cut(s)	2340, 2375
CviQI	GTAC	6 cut(s)	355, 514, 634, 772, 1496, 2234
DdeI	CTNAG	4 cut(s)	423, 867, 1296, 2220
DraI	TTTAAA	1 cut(s)	1677
DraIII	CACNNNGTG	2 cut(s)	500, 2260
DriI	GACNNNNNGTC	1 cut(s)	892
EaeI	YGGCCR	4 cut(s)	670, 1319, 1717, 2841
Eam1104I	CTCTTC	1 cut(s)	2942
Eam1105I	GACNNNNNGTC	1 cut(s)	892
EarI	CTCTTC	1 cut(s)	2942
EciI	GGCGGA	1 cut(s)	2635
Eco130I	CCWWGG	4 cut(s)	573, 642, 711, 1566
Eco24I	GRGCYC	1 cut(s)	2675
Eco31I	GGTCTC	3 cut(s)	164, 747, 2417
Eco32I	GATATC	1 cut(s)	2752
Eco47I	GGWCC	9 cut(s)	27, 135, 159, 570, 602, 886, 1355, 1656, 2549
Eco47III	AGCGCT	1 cut(s)	835
Eco88I	CYCGRG	2 cut(s)	1805, 2564
EcoO109I	RGGNCCY	2 cut(s)	886, 1355
EcoRI	GAATTC	1 cut(s)	1138
EcoRII	CCWGG	5 cut(s)	1620, 1714, 2226, 2329, 2422
EcoRV	GATATC	1 cut(s)	2752
EcoT14I	CCWWGG	4 cut(s)	573, 642, 711, 1566
EcoT22I	ATGCAT	2 cut(s)	1117, 1167
EcoT38I	GRGCYC	1 cut(s)	2675
ErhI	CCWWGG	4 cut(s)	573, 642, 711, 1566
FalI	AAGNNNNNCTT	6 cut(s)	730, 762, 820, 852, 2891, 2923
FaqI	GGGAC	8 cut(s)	40, 148, 172, 244, 588, 899, 1112, 1532
FauI	CCCGC	1 cut(s)	137
FauNDI	CATATG	1 cut(s)	1284
FbaI	TGATCA	1 cut(s)	2509
FblI	GTMKAC	1 cut(s)	444
FriOI	GRGCYC	1 cut(s)	2675
FspAI	RTGCGCAY	1 cut(s)	2826
FspBI	CTAG	1 cut(s)	2982
FspI	TGCGCA	1 cut(s)	2826
GlaI	GCGC	2 cut(s)	835, 2826
GsaI	CCCAGC	2 cut(s)	1587, 2820
GsuI	CTGGAG	5 cut(s)	576, 630, 2090, 2249, 2328
HaeII	RGCGCY	1 cut(s)	837
HaeIII	GGCC	4 cut(s)	672, 1321, 1719, 2843
HapII	CCGG	6 cut(s)	228, 304, 2034, 2249, 2600, 2840
HgaI	GACGC	1 cut(s)	1301
HhaI	GCGC	2 cut(s)	836, 2827
Hin6I	GCGC	2 cut(s)	834, 2825
HinP1I	GCGC	2 cut(s)	834, 2825
HincII	GTYRAC	2 cut(s)	939, 1012
HindII	GTYRAC	2 cut(s)	939, 1012
HindIII	AAGCTT	3 cut(s)	435, 1775, 2710
HpaII	CCGG	6 cut(s)	228, 304, 2034, 2249, 2600, 2840
Hpy166II	GTNNAC	8 cut(s)	76, 445, 778, 844, 939, 1012, 1659, 1844
Hpy8I	GTNNAC	8 cut(s)	76, 445, 778, 844, 939, 1012, 1659, 1844
HpyCH4IV	ACGT	2 cut(s)	774, 1066
HpyF10VI	GCNNNNNNNGC	5 cut(s)	678, 2039, 2537, 2588, 3017
HpyF3I	CTNAG	4 cut(s)	423, 867, 1296, 2220
HpySE526I	ACGT	2 cut(s)	774, 1066
HspAI	GCGC	2 cut(s)	834, 2825
Kpn2I	TCCGGA	2 cut(s)	303, 2248
KpnI	GGTACC	1 cut(s)	2237
Ksp22I	TGATCA	1 cut(s)	2509
Lsp1109I	GCAGC	7 cut(s)	272, 843, 1549, 2315, 2449, 2471, 2747
MabI	ACCWGGT	1 cut(s)	2422
MaeI	CTAG	1 cut(s)	2982
MaeII	ACGT	2 cut(s)	774, 1066
MaeIII	GTNAC	9 cut(s)	31, 103, 242, 1052, 1067, 1663, 1710, 2542, 2913
MbiI	CCGCTC	2 cut(s)	144, 1722
MfeI	CAATTG	1 cut(s)	2505
MflI	RGATCY	4 cut(s)	419, 638, 1624, 2335
MhlI	GDGCHC	5 cut(s)	1183, 2155, 2675, 2865, 3048
MlsI	TGGCCA	1 cut(s)	672
MluNI	TGGCCA	1 cut(s)	672
MlyI	GAGTC	6 cut(s)	28, 407, 926, 1402, 2441, 2621
MmeI	TCCRAC	2 cut(s)	985, 1195
Mox20I	TGGCCA	1 cut(s)	672
Mph1103I	ATGCAT	2 cut(s)	1117, 1167
MroI	TCCGGA	2 cut(s)	303, 2248
MscI	TGGCCA	1 cut(s)	672
MseI	TTAA	6 cut(s)	1260, 1676, 1754, 1931, 2555, 2892
MslI	CAYNNNNRTG	6 cut(s)	71, 101, 185, 251, 1110, 1327
Msp20I	TGGCCA	1 cut(s)	672
MspA1I	CMGCKG	2 cut(s)	2306, 2462
MspI	CCGG	6 cut(s)	228, 304, 2034, 2249, 2600, 2840
MspR9I	CCNGG	7 cut(s)	229, 1622, 1716, 2228, 2331, 2424, 2601
MunI	CAATTG	1 cut(s)	2505
Mva1269I	GAATGC	1 cut(s)	1462
MvaI	CCWGG	5 cut(s)	1622, 1716, 2228, 2331, 2424
MvnI	CGCG	7 cut(s)	50, 56, 80, 212, 430, 1464, 2732
MwoI	GCNNNNNNNGC	5 cut(s)	678, 2039, 2537, 2588, 3017
NciI	CCSGG	2 cut(s)	229, 2601
NcoI	CCATGG	2 cut(s)	642, 1566
NdeI	CATATG	1 cut(s)	1284
NmeAIII	GCCGAG	1 cut(s)	2949
NmuCI	GTSAC	6 cut(s)	31, 103, 242, 1663, 1710, 2913
NruI	TCGCGA	3 cut(s)	56, 212, 2732
NsbI	TGCGCA	1 cut(s)	2826
NsiI	ATGCAT	2 cut(s)	1117, 1167
NspI	RCATGY	2 cut(s)	1417, 2277
OliI	CACNNNNGTG	1 cut(s)	1327
PagI	TCATGA	2 cut(s)	180, 1702
PaqCI	CACCTGC	2 cut(s)	2371, 3011
PciI	ACATGT	1 cut(s)	1413
PcsI	WCGNNNNNNNCGW	1 cut(s)	2274
PctI	GAATGC	1 cut(s)	1462
PfeI	GAWTC	9 cut(s)	551, 932, 1472, 1984, 2081, 2369, 2618, 2679, 3032
PflFI	GACNNNGTC	3 cut(s)	798, 879, 2803
PflMI	CCANNNNNTGG	1 cut(s)	1235
Ple19I	CGATCG	2 cut(s)	54, 313
PleI	GAGTC	6 cut(s)	28, 406, 925, 1402, 2440, 2620
PpsI	GAGTC	6 cut(s)	28, 406, 925, 1402, 2440, 2620
Ppu21I	YACGTR	1 cut(s)	775
PpuMI	RGGWCCY	2 cut(s)	886, 1355
PscI	ACATGT	1 cut(s)	1413
Psp5II	RGGWCCY	2 cut(s)	886, 1355
Psp6I	CCWGG	5 cut(s)	1620, 1714, 2226, 2329, 2422
PspFI	CCCAGC	2 cut(s)	1583, 2816
PspGI	CCWGG	5 cut(s)	1620, 1714, 2226, 2329, 2422
PspPI	GGNCC	9 cut(s)	27, 135, 159, 570, 602, 886, 1355, 1656, 2549
PspPPI	RGGWCCY	2 cut(s)	886, 1355
PstI	CTGCAG	1 cut(s)	2461
PstNI	CAGNNNCTG	1 cut(s)	2546
PsuI	RGATCY	4 cut(s)	419, 638, 1624, 2335
PsyI	GACNNNGTC	3 cut(s)	798, 879, 2803
PvuI	CGATCG	2 cut(s)	54, 313
PvuII	CAGCTG	2 cut(s)	2306, 2462
RgaI	GCGATCGC	1 cut(s)	54
RruI	TCGCGA	3 cut(s)	56, 212, 2732
RsaI	GTAC	6 cut(s)	356, 515, 635, 773, 1497, 2235
RsaNI	GTAC	6 cut(s)	355, 514, 634, 772, 1496, 2234
RseI	CAYNNNNRTG	8 cut(s)	71, 101, 185, 251, 1110, 1327, 1416, 1503
SaqAI	TTAA	6 cut(s)	1260, 1676, 1754, 1931, 2555, 2892
Sau96I	GGNCC	9 cut(s)	27, 135, 159, 570, 602, 886, 1355, 1656, 2549
SchI	GAGTC	6 cut(s)	28, 407, 926, 1402, 2441, 2621
ScrFI	CCNGG	7 cut(s)	229, 1622, 1716, 2228, 2331, 2424, 2601
SduI	GDGCHC	5 cut(s)	1183, 2155, 2675, 2865, 3048
SexAI	ACCWGGT	1 cut(s)	2422
SfaAI	GCGATCGC	1 cut(s)	54
SfcI	CTRYAG	2 cut(s)	2013, 2457
SgfI	GCGATCGC	1 cut(s)	54
SinI	GGWCC	9 cut(s)	27, 135, 159, 570, 602, 886, 1355, 1656, 2549
SmiMI	CAYNNNNRTG	8 cut(s)	71, 101, 185, 251, 1110, 1327, 1416, 1503
SmlI	CTYRAG	1 cut(s)	2696
SmoI	CTYRAG	1 cut(s)	2696
SspMI	CTAG	1 cut(s)	2982
StyD4I	CCNGG	7 cut(s)	227, 1620, 1714, 2226, 2329, 2422, 2599
StyI	CCWWGG	4 cut(s)	573, 642, 711, 1566
TaiI	ACGT	2 cut(s)	777, 1069
TaqI	TCGA	8 cut(s)	204, 309, 823, 1099, 2430, 2621, 2667, 3035
TatI	WGTACW	3 cut(s)	513, 633, 1495
TauI	GCSGC	4 cut(s)	433, 1321, 1722, 2534
TfiI	GAWTC	9 cut(s)	551, 932, 1472, 1984, 2081, 2369, 2618, 2679, 3032
Tru1I	TTAA	6 cut(s)	1260, 1676, 1754, 1931, 2555, 2892
Tru9I	TTAA	6 cut(s)	1260, 1676, 1754, 1931, 2555, 2892
TscAI	CASTG	5 cut(s)	388, 613, 1666, 1826, 2206
TseFI	GTSAC	6 cut(s)	31, 103, 242, 1663, 1710, 2913
TseI	GCWGC	7 cut(s)	260, 831, 1562, 2303, 2459, 2462, 2760
Tsp45I	GTSAC	6 cut(s)	31, 103, 242, 1663, 1710, 2913
TspGWI	ACGGA	1 cut(s)	829
TspRI	CASTG	5 cut(s)	388, 613, 1666, 1826, 2206
Tth111I	GACNNNGTC	3 cut(s)	798, 879, 2803
Van91I	CCANNNNNTGG	1 cut(s)	1235
VpaK11BI	GGWCC	9 cut(s)	27, 135, 159, 570, 602, 886, 1355, 1656, 2549
XapI	RAATTY	3 cut(s)	526, 1138, 1727
XceI	RCATGY	2 cut(s)	1417, 2277
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2582
XmiI	GTMKAC	1 cut(s)	444
XspI	CTAG	1 cut(s)	2982
Zsp2I	ATGCAT	2 cut(s)	1117, 1167

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.