Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0006698

Physical Location & Seq

Genomic Coordinates Reverse (-)

29858850 .. 29863387

Gene Structure 4538 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G320700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1344 bp

ATGACTAAAATGAAGAGCAGGGTATCACGAATTGGAAGCTACGCAATTGCATCTTCCAAAAGAGACGGCCACCATCAACAGCCTTGCATTACGTGCACCACTTTCAACATCCTGGCTCCAATCTACAAGCGCCTCAACCATGACGACCCCAATTGTCGAGAAAGTGATTACAGAGCGTATTGGCTGGCCAGGAATCAAAGGATATTGGATTGTTTGTTGGCGGAGAGATCTTCCATCATTTGTCTTCAGGAGTTCTGGGTAGGAAATGAAGAGCTAGTGAATATTTATGAGAAGCGACTTGGTGATGCTGGTTATGTCAACTTTCAGCTAGCACGGACCAACAACCGTGGCGATGGTTTGCTGACTGCGGTGCATAAGGACTACTTTAGAGTTGTAAACTATCAGGAGATTCTATTCAATGATTGCGGTGATCGTGTTGCTCAGTTGTTACATGTGGAATTAGCTACCCCAATTTCACAGTTTCGAAACAATGATATTAGGCAGGATATCCTCATTGTGAACACCCACTTGTTATTTCCTCATGACTCAAGTTTGTGTATAGTTCGATTGCATCAGGTCTACAGAATCTTACAATACGTAGAGTCTTATCAAAAAGAGAACAAGCTTAATCCCATGCCCATCATACTCTGCGGTGACTGGAATGGAAGCAAACGTGGACATGTTTACAAGTTTCTTAGGTCCCAGGGGTTTGTATCTTCTTATGATACTGCTCATCATTACACCGATGCAGATGCACACAAGTGGGTTAGCCACCGAAACCACAGGGGAAACATATGTGGCGTTGATTTTATATGGCTTCTCAATCCTAATAGTTACCGCAAATTACTAAAAACAAGTTGGAGTGAGGCGGTATTTGGCATGTTCAAGTATCTACTACGAAAAGCTTCCCTGACAGAAGATGATGCCTTTGCCTTTTTGAAGGCTGATAATCCTGGTGATTACATTACCTCTTCAGGTTTCTGTGAAGCACTTCGACAGCTTAATATGACTGGTCATTGCCATGGACTTAGCCTTGAAGAGACCAAGGACTTGTGGGTCCAAGCAGACATAGATGGAAATGGTATTCTTGATTACGCAGAATTTCAGCAACGAATTTGGAATCCTACGGGATCAGAGCAGAGAGATGAAAGTGGTAATGACTGTGATAGTGGTTCCAAGGGAAATCAGGAACAAACAATTGGTTTCAGTGTCAAAAATGCGGTTCTCTTCCCTCCTGAAGTGGAGAAAGGAACTTGGCCTGAAGACTACTCTCTTTCCGATCATGCACGACTCACAGTGGTGTTCTCACCAATAAGAATGCCATGCTCTCAGATGATTCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exo_endo_phos

Protein Analysis

448

Amino Acids

51.35

Weight (kDa)

6.49

Isoelectric Point (pI)

41.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006698)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54130
fragaria_vesca	FvH4_7g33080 FvH4_7g33080 FvH4_7g33080 FvH4_7g33080
malus_domestica	MD01G1230000.v1.1 MD01G1230100.v1.1 MD07G1301900.v1.1
prunus_persica	Prupe.2G320700_v2.0.a1 Prupe.2G320700_v2.0.a1 Prupe.2G320700_v2.0.a1 Prupe.2G320700_v2.0.a1
pyrus_communis	pycom01g23810 pycom07g27500 pycom07g27510
rosa_chinensis	RchiOBHm_Chr1g0383111
rosa_laevigata	RLG00000026129
rosa_multiflora	Rmu_sc0008563.1_g000012
rosa_roxburghii	Rroxscaffold_4G00277580
rosa_rugosa	Rorug01G0438700 Rorug01G0438700
rosa_samantha	Rh1AG464300 Rh1BG421600 Rh1CG435000 Rh1DG454200
rosa_wichuraiana	Rw1G040790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1055
AccI	GTMKAC	1 cut(s)	579
AciI	CCGC	7 cut(s)	221, 368, 426, 651, 838, 869, 1220
AclWI	GGATC	1 cut(s)	1138
AcoI	YGGCCR	2 cut(s)	67, 186
AcsI	RAATTY	2 cut(s)	1100, 1113
AcuI	CTGAAG	4 cut(s)	230, 957, 1257, 1281
AflIII	ACRYGT	2 cut(s)	451, 679
AgsI	TTSAA	5 cut(s)	106, 418, 886, 940, 1037
AjnI	CCWGG	4 cut(s)	111, 188, 702, 952
AjuI	GAANNNNNNNTTGG	2 cut(s)	1182, 1214
AleI	CACNNNNGTG	2 cut(s)	760, 1298
AluBI	AGCT	7 cut(s)	39, 274, 328, 464, 625, 905, 1000
AluI	AGCT	7 cut(s)	39, 274, 328, 464, 625, 905, 1000
Alw21I	GWGCWC	1 cut(s)	98
Alw26I	GTCTC	2 cut(s)	57, 1034
Alw44I	GTGCAC	1 cut(s)	94
AlwI	GGATC	1 cut(s)	1138
AoxI	GGCC	3 cut(s)	67, 186, 1256
ApaLI	GTGCAC	1 cut(s)	94
ApoI	RAATTY	2 cut(s)	1100, 1113
Asp700I	GAANNNNTTC	2 cut(s)	904, 990
AspLEI	GCGC	1 cut(s)	132
AspS9I	GGNCC	3 cut(s)	336, 699, 1057
AsuHPI	GGTGA	5 cut(s)	314, 440, 665, 968, 1299
AsuII	TTCGAA	1 cut(s)	484
AsuNHI	GCTAGC	1 cut(s)	328
AvaII	GGWCC	3 cut(s)	336, 699, 1057
BaeGI	GKGCMC	1 cut(s)	98
BalI	TGGCCA	1 cut(s)	188
BbsI	GAAGAC	2 cut(s)	236, 1269
Bbv12I	GWGCWC	1 cut(s)	98
BccI	CCATC	5 cut(s)	81, 242, 347, 647, 1067
BceAI	ACGGC	1 cut(s)	82
BcgI	CGANNNNNNTGC	2 cut(s)	734, 768
BciT130I	CCWGG	4 cut(s)	113, 190, 704, 954
BcoDI	GTCTC	2 cut(s)	57, 1034
BfaI	CTAG	2 cut(s)	275, 329
BfmI	CTRYAG	1 cut(s)	580
BfoI	RGCGCY	1 cut(s)	133
BglII	AGATCT	1 cut(s)	227
Bme1390I	CCNGG	4 cut(s)	113, 190, 704, 954
Bme18I	GGWCC	3 cut(s)	336, 699, 1057
BmgT120I	GGNCC	3 cut(s)	336, 699, 1057
BmiI	GGNNCC	4 cut(s)	117, 701, 1058, 1174
BmrFI	CCNGG	4 cut(s)	113, 190, 704, 954
BmsI	GCATC	6 cut(s)	59, 295, 580, 736, 742, 913
BmtI	GCTAGC	1 cut(s)	332
BpiI	GAAGAC	2 cut(s)	236, 1269
Bpu14I	TTCGAA	1 cut(s)	484
BpuEI	CTTGAG	1 cut(s)	532
BsaAI	YACGTR	2 cut(s)	93, 598
BsaI	GGTCTC	1 cut(s)	1034
BsaJI	CCNNGG	6 cut(s)	346, 702, 703, 1021, 1044, 1176
Bse1I	ACTGG	2 cut(s)	662, 1015
Bse3DI	GCAATG	1 cut(s)	1015
BseBI	CCWGG	4 cut(s)	113, 190, 704, 954
BseDI	CCNNGG	6 cut(s)	346, 702, 703, 1021, 1044, 1176
BseGI	GGATG	1 cut(s)	108
BseMI	GCAATG	1 cut(s)	1015
BseMII	CTCAG	2 cut(s)	455, 1343
BseNI	ACTGG	2 cut(s)	662, 1015
BseSI	GKGCMC	1 cut(s)	98
BshFI	GGCC	3 cut(s)	69, 188, 1258
BsiHKAI	GWGCWC	1 cut(s)	98
BslFI	GGGAC	1 cut(s)	685
BsmAI	GTCTC	2 cut(s)	57, 1034
BsmBI	CGTCTC	1 cut(s)	57
BsmFI	GGGAC	1 cut(s)	685
BsmI	GAATGC	1 cut(s)	1323
BsnI	GGCC	3 cut(s)	69, 188, 1258
Bso31I	GGTCTC	1 cut(s)	1034
Bsp119I	TTCGAA	1 cut(s)	484
Bsp1286I	GDGCHC	1 cut(s)	98
Bsp143I	GATC	4 cut(s)	227, 430, 1130, 1279
Bsp19I	CCATGG	1 cut(s)	1021
BspACI	CCGC	7 cut(s)	221, 368, 426, 651, 838, 869, 1220
BspANI	GGCC	3 cut(s)	69, 188, 1258
BspCNI	CTCAG	2 cut(s)	454, 1342
BspHI	TCATGA	1 cut(s)	541
BspLI	GGNNCC	4 cut(s)	117, 701, 1058, 1174
BspOI	GCTAGC	1 cut(s)	332
BspPI	GGATC	1 cut(s)	1138
BspQI	GCTCTTC	2 cut(s)	8, 264
BspT104I	TTCGAA	1 cut(s)	484
BspTNI	GGTCTC	1 cut(s)	1034
BsrDI	GCAATG	1 cut(s)	1015
BsrI	ACTGG	2 cut(s)	662, 1015
BssECI	CCNNGG	6 cut(s)	346, 702, 703, 1021, 1044, 1176
BssMI	GATC	4 cut(s)	227, 430, 1130, 1279
BssT1I	CCWWGG	3 cut(s)	1021, 1044, 1176
Bst2UI	CCWGG	4 cut(s)	113, 190, 704, 954
Bst4CI	ACNGT	4 cut(s)	347, 480, 1163, 1297
Bst6I	CTCTTC	5 cut(s)	8, 264, 976, 1032, 1232
BstAPI	GCANNNNNTGC	1 cut(s)	93
BstBAI	YACGTR	2 cut(s)	93, 598
BstBI	TTCGAA	1 cut(s)	484
BstC8I	GCNNGC	2 cut(s)	186, 330
BstDEI	CTNAG	4 cut(s)	441, 695, 1028, 1329
BstDSI	CCRYGG	2 cut(s)	346, 1021
BstF5I	GGATG	1 cut(s)	108
BstH2I	RGCGCY	1 cut(s)	133
BstHHI	GCGC	1 cut(s)	132
BstKTI	GATC	4 cut(s)	230, 433, 1133, 1282
BstMAI	GTCTC	2 cut(s)	57, 1034
BstMBI	GATC	4 cut(s)	227, 430, 1130, 1279
BstMWI	GCNNNNNNNGC	1 cut(s)	93
BstNI	CCWGG	4 cut(s)	113, 190, 704, 954
BstNSI	RCATGY	3 cut(s)	455, 683, 883
BstSCI	CCNGG	4 cut(s)	111, 188, 702, 952
BstSFI	CTRYAG	1 cut(s)	580
BstSLI	GKGCMC	1 cut(s)	98
BstSNI	TACGTA	1 cut(s)	598
BstV2I	GAAGAC	2 cut(s)	236, 1269
BstX2I	RGATCY	1 cut(s)	227
BstYI	RGATCY	1 cut(s)	227
BsuRI	GGCC	3 cut(s)	69, 188, 1258
BtgI	CCRYGG	2 cut(s)	346, 1021
BtgZI	GCGATG	1 cut(s)	366
BtsCI	GGATG	1 cut(s)	108
BtsIMutI	CAGTG	2 cut(s)	1213, 1302
Cac8I	GCNNGC	2 cut(s)	186, 330
CciI	TCATGA	1 cut(s)	541
CfoI	GCGC	1 cut(s)	132
Cfr13I	GGNCC	3 cut(s)	336, 699, 1057
CspCI	CAANNNNNGTGG	2 cut(s)	328, 363
CviAII	CATG	9 cut(s)	140, 452, 542, 634, 680, 880, 1022, 1283, 1323
DdeI	CTNAG	4 cut(s)	441, 695, 1028, 1329
DpnI	GATC	4 cut(s)	229, 432, 1132, 1281
DpnII	GATC	4 cut(s)	227, 430, 1130, 1279
DrdI	GACNNNNNNGTC	1 cut(s)	1055
DseDI	GACNNNNNNGTC	1 cut(s)	1055
EaeI	YGGCCR	2 cut(s)	67, 186
Eam1104I	CTCTTC	5 cut(s)	8, 264, 976, 1032, 1232
EarI	CTCTTC	5 cut(s)	8, 264, 976, 1032, 1232
EciI	GGCGGA	1 cut(s)	236
Eco105I	TACGTA	1 cut(s)	598
Eco130I	CCWWGG	3 cut(s)	1021, 1044, 1176
Eco31I	GGTCTC	1 cut(s)	1034
Eco32I	GATATC	1 cut(s)	508
Eco47I	GGWCC	3 cut(s)	336, 699, 1057
Eco57I	CTGAAG	4 cut(s)	230, 957, 1257, 1281
EcoO109I	RGGNCCY	1 cut(s)	699
EcoRII	CCWGG	4 cut(s)	111, 188, 702, 952
EcoRV	GATATC	1 cut(s)	508
EcoT14I	CCWWGG	3 cut(s)	1021, 1044, 1176
ErhI	CCWWGG	3 cut(s)	1021, 1044, 1176
Esp3I	CGTCTC	1 cut(s)	57
FaeI	CATG	9 cut(s)	143, 455, 545, 637, 683, 883, 1025, 1286, 1326
FalI	AAGNNNNNCTT	2 cut(s)	368, 400
FaqI	GGGAC	1 cut(s)	685
FatI	CATG	9 cut(s)	139, 451, 541, 633, 679, 879, 1021, 1282, 1322
FauNDI	CATATG	1 cut(s)	794
FblI	GTMKAC	1 cut(s)	579
FokI	GGATG	1 cut(s)	95
FspBI	CTAG	2 cut(s)	275, 329
GlaI	GCGC	1 cut(s)	131
HaeII	RGCGCY	1 cut(s)	133
HaeIII	GGCC	3 cut(s)	69, 188, 1258
HhaI	GCGC	1 cut(s)	132
Hin1II	CATG	9 cut(s)	143, 455, 545, 637, 683, 883, 1025, 1286, 1326
Hin6I	GCGC	1 cut(s)	130
HinP1I	GCGC	1 cut(s)	130
HincII	GTYRAC	1 cut(s)	319
HindII	GTYRAC	1 cut(s)	319
HindIII	AAGCTT	2 cut(s)	623, 903
HinfI	GANTC	8 cut(s)	193, 409, 545, 585, 602, 1120, 1290, 1336
HphI	GGTGA	5 cut(s)	314, 440, 665, 968, 1299
Hpy166II	GTNNAC	7 cut(s)	96, 319, 397, 520, 580, 677, 685
Hpy188I	TCNGA	3 cut(s)	1135, 1279, 1332
Hpy188III	TCNNGA	8 cut(s)	27, 158, 248, 404, 542, 1088, 1187, 1235
Hpy8I	GTNNAC	7 cut(s)	96, 319, 397, 520, 580, 677, 685
HpyAV	CCTTC	1 cut(s)	934
HpyCH4III	ACNGT	4 cut(s)	347, 480, 1163, 1297
HpyCH4IV	ACGT	3 cut(s)	92, 597, 673
HpyCH4V	TGCA	8 cut(s)	50, 87, 96, 373, 571, 749, 755, 1286
HpyF10VI	GCNNNNNNNGC	1 cut(s)	93
HpyF3I	CTNAG	4 cut(s)	441, 695, 1028, 1329
HpySE526I	ACGT	3 cut(s)	92, 597, 673
Hsp92II	CATG	9 cut(s)	143, 455, 545, 637, 683, 883, 1025, 1286, 1326
HspAI	GCGC	1 cut(s)	130
Kzo9I	GATC	4 cut(s)	227, 430, 1130, 1279
LguI	GCTCTTC	2 cut(s)	8, 264
LmnI	GCTCC	1 cut(s)	121
LweI	GCATC	6 cut(s)	59, 295, 580, 736, 742, 913
MaeI	CTAG	2 cut(s)	275, 329
MaeII	ACGT	3 cut(s)	92, 597, 673
MaeIII	GTNAC	3 cut(s)	447, 653, 833
MalI	GATC	4 cut(s)	229, 432, 1132, 1281
MboI	GATC	4 cut(s)	227, 430, 1130, 1279
MfeI	CAATTG	3 cut(s)	45, 151, 1197
MflI	RGATCY	1 cut(s)	227
MhlI	GDGCHC	1 cut(s)	98
MlsI	TGGCCA	1 cut(s)	188
MluCI	AATT	9 cut(s)	30, 45, 151, 458, 471, 842, 1100, 1113, 1197
MluNI	TGGCCA	1 cut(s)	188
MlyI	GAGTC	3 cut(s)	539, 611, 1284
MmeI	TCCRAC	1 cut(s)	839
MnlI	CCTC	6 cut(s)	143, 521, 549, 859, 979, 1242
Mox20I	TGGCCA	1 cut(s)	188
MroXI	GAANNNNTTC	2 cut(s)	904, 990
MscI	TGGCCA	1 cut(s)	188
MseI	TTAA	2 cut(s)	627, 1002
MslI	CAYNNNNRTG	3 cut(s)	760, 1020, 1298
Msp20I	TGGCCA	1 cut(s)	188
MspR9I	CCNGG	4 cut(s)	113, 190, 704, 954
MunI	CAATTG	3 cut(s)	45, 151, 1197
Mva1269I	GAATGC	1 cut(s)	1323
MvaI	CCWGG	4 cut(s)	113, 190, 704, 954
MwoI	GCNNNNNNNGC	1 cut(s)	93
NcoI	CCATGG	1 cut(s)	1021
NdeI	CATATG	1 cut(s)	794
NdeII	GATC	4 cut(s)	227, 430, 1130, 1279
NheI	GCTAGC	1 cut(s)	328
NlaIII	CATG	9 cut(s)	143, 455, 545, 637, 683, 883, 1025, 1286, 1326
NlaIV	GGNNCC	4 cut(s)	117, 701, 1058, 1174
NmuCI	GTSAC	1 cut(s)	653
NspI	RCATGY	3 cut(s)	455, 683, 883
NspV	TTCGAA	1 cut(s)	484
OliI	CACNNNNGTG	2 cut(s)	760, 1298
PagI	TCATGA	1 cut(s)	541
PasI	CCCWGGG	1 cut(s)	703
PciI	ACATGT	2 cut(s)	451, 679
PciSI	GCTCTTC	2 cut(s)	8, 264
PctI	GAATGC	1 cut(s)	1323
PdmI	GAANNNNTTC	2 cut(s)	904, 990
PfeI	GAWTC	5 cut(s)	193, 409, 585, 1120, 1336
PleI	GAGTC	3 cut(s)	539, 610, 1284
PpsI	GAGTC	3 cut(s)	539, 610, 1284
Ppu21I	YACGTR	2 cut(s)	93, 598
PpuMI	RGGWCCY	1 cut(s)	699
PscI	ACATGT	2 cut(s)	451, 679
Psp5II	RGGWCCY	1 cut(s)	699
Psp6I	CCWGG	4 cut(s)	111, 188, 702, 952
PspGI	CCWGG	4 cut(s)	111, 188, 702, 952
PspN4I	GGNNCC	4 cut(s)	117, 701, 1058, 1174
PspPI	GGNCC	3 cut(s)	336, 699, 1057
PspPPI	RGGWCCY	1 cut(s)	699
PsuI	RGATCY	1 cut(s)	227
RseI	CAYNNNNRTG	3 cut(s)	760, 1020, 1298
SapI	GCTCTTC	2 cut(s)	8, 264
SaqAI	TTAA	2 cut(s)	627, 1002
Sau3AI	GATC	4 cut(s)	227, 430, 1130, 1279
Sau96I	GGNCC	3 cut(s)	336, 699, 1057
SchI	GAGTC	3 cut(s)	539, 611, 1284
ScrFI	CCNGG	4 cut(s)	113, 190, 704, 954
SduI	GDGCHC	1 cut(s)	98
SfaNI	GCATC	6 cut(s)	59, 295, 580, 736, 742, 913
SfcI	CTRYAG	1 cut(s)	580
SfuI	TTCGAA	1 cut(s)	484
SinI	GGWCC	3 cut(s)	336, 699, 1057
SmiMI	CAYNNNNRTG	3 cut(s)	760, 1020, 1298
SmlI	CTYRAG	1 cut(s)	547
SmoI	CTYRAG	1 cut(s)	547
SnaBI	TACGTA	1 cut(s)	598
Sse9I	AATT	9 cut(s)	30, 45, 151, 458, 471, 842, 1100, 1113, 1197
SsiI	CCGC	7 cut(s)	221, 368, 426, 651, 838, 869, 1220
SspI	AATATT	1 cut(s)	283
SspMI	CTAG	2 cut(s)	275, 329
StyD4I	CCNGG	4 cut(s)	111, 188, 702, 952
StyI	CCWWGG	3 cut(s)	1021, 1044, 1176
TaaI	ACNGT	4 cut(s)	347, 480, 1163, 1297
TaiI	ACGT	3 cut(s)	95, 600, 676
TaqI	TCGA	4 cut(s)	157, 484, 565, 994
TasI	AATT	9 cut(s)	30, 45, 151, 458, 471, 842, 1100, 1113, 1197
TfiI	GAWTC	5 cut(s)	193, 409, 585, 1120, 1336
Tru1I	TTAA	2 cut(s)	627, 1002
Tru9I	TTAA	2 cut(s)	627, 1002
TscAI	CASTG	2 cut(s)	1213, 1302
TseFI	GTSAC	1 cut(s)	653
Tsp45I	GTSAC	1 cut(s)	653
TspDTI	ATGAA	3 cut(s)	26, 282, 1161
TspGWI	ACGGA	1 cut(s)	349
TspRI	CASTG	2 cut(s)	1213, 1302
VneI	GTGCAC	1 cut(s)	94
VpaK11BI	GGWCC	3 cut(s)	336, 699, 1057
XapI	RAATTY	2 cut(s)	1100, 1113
XceI	RCATGY	3 cut(s)	455, 683, 883
XmiI	GTMKAC	1 cut(s)	579
XmnI	GAANNNNTTC	2 cut(s)	904, 990
XspI	CTAG	2 cut(s)	275, 329

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.