Prupe.2G326800_v2.0.a1

TOM1-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
30136615 .. 30138982
2368 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G326800.1

Sequence Viewer

Length: 1191 bp
ATGAGTGACAATTTGATGGAGAAAGTGAGTGCTTTTGGCGAACGCCTCAAGATCGAAGGGTCTGAGGTTGGTCGAAAGATGAGCGCTGGCTTGAGCTCAGTGAGCTTCAAGGTGAAGGAGCTCTTCCAAGGCCCAAACCAAGCAGATAAGATTGTCGAAGATGCCACATCAGAGGCACTTGACGAGCCTGACTGGGCTATGAATCTTGATATTTGTGACATGATCAATACTGAAAGGGTCAACAGTGTCGAATTAGTTCGTGGTATAAAAAAGCGGATTATGTTGAAGAATCCTAGAGTCCAGTACCTCTCGCTAGTACTGCTTGAAACATGTGTTAAGAACTGTGAGAAGGCTTTCTCAGAGATAGCTGCAGAAAGAGTTCTTGATGAGATGGTGAAGCTGATTGACGATCCTCAGACTGTTGTAAATAATCGCAATAAGGCTTTGATGCTGATCGAAGCATGGGGGGAATCGACTGGTGAGCTCCGCTATTTGCCTGTTTACGAGGAAACATACAAGAGTTTAAGATCAAGGGGTATTCGGTTCCCTGGTCGTGACAATGAGAGTTTGGCACCAATTTTCACTCCCCCACGTTCGGTTTCAGCTTCAGAGTCAGATGCTAGCCTTTCCCAGCAAATTCCACTTGATATTCCTGTGCAAGGCTTTACGGCTGAACAAACAAAGGAAGCATTTGATGTTGCAAGAAACAGTATTGAGCTTCTTAGTACTGTTTTCTCCTCTTCAACCCAACAAGATGCTTTACAGGATGACTTGACAGCCACACTTGTACAACAATGTCGTCAGTCTCAATCCGCCGTCCAGAGAATTATAGAGACAGCCGGAGAAAACGAGGCCTTGCTGTTTGAAGCGTTGAATGTGAATGATGAGATCCATAAAGTTCTATCCAAATATGAAGAACTGATGAAGCCTTTGGTTGTTCCGACTGAGCCAGAACCTGCAATGATACCCGTTGCTGTGGAGGCTGATGAATCACCGAGTCATGCGAAAGAGGATTCCTTGATTAGAAAACCAGCTGCTTCTCGAGGTCTGGTCCATGCAGGGAGCCACGATGACATGATGGATGATCTGGATGAGATGATATTTGGCAAGAAAGGTGGAAGTTCTTCTGAAGGAAACCAAGATCCGAAGAAACAGCAGCCGGCAGCAAAGGATGACCTGATCAGCTTTTGA

Protein Analysis

397

Amino Acids

43.84

Weight (kDa)

4.7

Isoelectric Point (pI)

45.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 964
AccB1I GGYRCC 1 cut(s) 571
AciI CCGC 3 cut(s) 274, 487, 813
AclWI GGATC 3 cut(s) 404, 883, 1136
AcsI RAATTY 1 cut(s) 636
AcuI CTGAAG 2 cut(s) 591, 1149
AfaI GTAC 4 cut(s) 305, 318, 727, 789
AfeI AGCGCT 1 cut(s) 85
AfiI CCNNNNNNNGG 2 cut(s) 595, 659
AflIII ACRYGT 1 cut(s) 329
AgsI TTSAA 6 cut(s) 109, 286, 326, 744, 866, 874
AjnI CCWGG 1 cut(s) 547
Alw21I GWGCWC 3 cut(s) 98, 123, 486
Alw26I GTCTC 2 cut(s) 810, 827
AlwI GGATC 3 cut(s) 404, 883, 1136
AlwNI CAGNNNCTG 1 cut(s) 956
Ama87I CYCGRG 1 cut(s) 1041
Aor51HI AGCGCT 1 cut(s) 85
AoxI GGCC 2 cut(s) 130, 852
ApeKI GCWGC 4 cut(s) 368, 1034, 1156, 1163
ApoI RAATTY 1 cut(s) 636
Asp700I GAANNNNTTC 4 cut(s) 255, 353, 378, 1123
AspLEI GCGC 1 cut(s) 86
AspS9I GGNCC 2 cut(s) 131, 1051
AsuHPI GGTGA 4 cut(s) 124, 406, 491, 984
AsuNHI GCTAGC 1 cut(s) 620
AvaI CYCGRG 1 cut(s) 1041
AvaII GGWCC 1 cut(s) 1051
BanI GGYRCC 1 cut(s) 571
BanII GRGCYC 3 cut(s) 98, 123, 486
Bbv12I GWGCWC 3 cut(s) 98, 123, 486
BbvI GCAGC 4 cut(s) 355, 1021, 1168, 1175
BccI CCATC 3 cut(s) 10, 385, 1072
BceAI ACGGC 2 cut(s) 684, 800
BciT130I CCWGG 1 cut(s) 549
BclI TGATCA 2 cut(s) 222, 1179
BcoDI GTCTC 2 cut(s) 810, 827
BfaI CTAG 3 cut(s) 294, 314, 621
BfmI CTRYAG 1 cut(s) 369
BfoI RGCGCY 1 cut(s) 87
BfuAI ACCTGC 1 cut(s) 964
BisI GCNGC 4 cut(s) 369, 1035, 1157, 1164
BlsI GCNGC 4 cut(s) 370, 1036, 1158, 1165
BmcAI AGTACT 2 cut(s) 318, 727
Bme1390I CCNGG 1 cut(s) 549
Bme18I GGWCC 1 cut(s) 1051
BmeT110I CYCGRG 1 cut(s) 1041
BmgT120I GGNCC 2 cut(s) 131, 1051
BmiI GGNNCC 3 cut(s) 545, 573, 1064
BmrFI CCNGG 1 cut(s) 549
BmrI ACTGGG 1 cut(s) 202
BmsI GCATC 4 cut(s) 151, 438, 607, 745
BmtI GCTAGC 1 cut(s) 624
BmuI ACTGGG 1 cut(s) 202
BpuEI CTTGAG 2 cut(s) 32, 112
BsaBI GATNNNNATC 1 cut(s) 452
BsaJI CCNNGG 2 cut(s) 127, 547
Bsc4I CCNNNNNNNGG 2 cut(s) 595, 659
Bse118I RCCGGY 1 cut(s) 1159
Bse1I ACTGG 3 cut(s) 197, 301, 481
Bse3DI GCAATG 1 cut(s) 966
Bse8I GATNNNNATC 1 cut(s) 452
BseBI CCWGG 1 cut(s) 549
BseDI CCNNGG 2 cut(s) 127, 547
BseGI GGATG 4 cut(s) 772, 1087, 1096, 1177
BseJI GATNNNNATC 1 cut(s) 452
BseLI CCNNNNNNNGG 2 cut(s) 595, 659
BseMI GCAATG 1 cut(s) 966
BseMII CTCAG 5 cut(s) 54, 111, 372, 428, 936
BseNI ACTGG 3 cut(s) 197, 301, 481
BseRI GAGGAG 1 cut(s) 727
BseXI GCAGC 4 cut(s) 355, 1021, 1168, 1175
BseYI CCCAGC 1 cut(s) 630
BshFI GGCC 2 cut(s) 132, 854
BshNI GGYRCC 1 cut(s) 571
BsiHKAI GWGCWC 3 cut(s) 98, 123, 486
BsiHKCI CYCGRG 1 cut(s) 1041
BsiSI CCGG 2 cut(s) 840, 1160
BslI CCNNNNNNNGG 2 cut(s) 595, 659
BsmAI GTCTC 2 cut(s) 810, 827
BsnI GGCC 2 cut(s) 132, 854
BsoBI CYCGRG 1 cut(s) 1041
Bsp1286I GDGCHC 3 cut(s) 98, 123, 486
Bsp1407I TGTACA 1 cut(s) 787
Bsp143I GATC 9 cut(s) 51, 222, 409, 453, 527, 888, 1084, 1141, 1179
BspACI CCGC 3 cut(s) 274, 487, 813
BspANI GGCC 2 cut(s) 132, 854
BspCNI CTCAG 5 cut(s) 55, 110, 371, 427, 937
BspLI GGNNCC 3 cut(s) 545, 573, 1064
BspMAI CTGCAG 1 cut(s) 373
BspMI ACCTGC 1 cut(s) 964
BspOI GCTAGC 1 cut(s) 624
BspPI GGATC 3 cut(s) 404, 883, 1136
BspQI GCTCTTC 1 cut(s) 128
BspT107I GGYRCC 1 cut(s) 571
BsrDI GCAATG 1 cut(s) 966
BsrFI RCCGGY 1 cut(s) 1159
BsrGI TGTACA 1 cut(s) 787
BsrI ACTGG 3 cut(s) 197, 301, 481
BssAI RCCGGY 1 cut(s) 1159
BssECI CCNNGG 2 cut(s) 127, 547
BssMI GATC 9 cut(s) 51, 222, 409, 453, 527, 888, 1084, 1141, 1179
BssT1I CCWWGG 1 cut(s) 127
Bst2UI CCWGG 1 cut(s) 549
Bst4CI ACNGT 5 cut(s) 245, 344, 421, 710, 730
Bst6I CTCTTC 2 cut(s) 128, 745
BstAUI TGTACA 1 cut(s) 787
BstC8I GCNNGC 3 cut(s) 88, 622, 1161
BstDEI CTNAG 6 cut(s) 63, 97, 358, 414, 722, 945
BstENI CCTNNNNNAGG 1 cut(s) 657
BstF5I GGATG 4 cut(s) 772, 1087, 1096, 1177
BstH2I RGCGCY 1 cut(s) 87
BstHHI GCGC 1 cut(s) 86
BstKTI GATC 9 cut(s) 54, 225, 412, 456, 530, 891, 1087, 1144, 1182
BstMAI GTCTC 2 cut(s) 810, 827
BstMBI GATC 9 cut(s) 51, 222, 409, 453, 527, 888, 1084, 1141, 1179
BstMWI GCNNNNNNNGC 3 cut(s) 102, 319, 980
BstNI CCWGG 1 cut(s) 549
BstNSI RCATGY 1 cut(s) 333
BstSCI CCNGG 1 cut(s) 547
BstSFI CTRYAG 1 cut(s) 369
BstV1I GCAGC 4 cut(s) 355, 1021, 1168, 1175
BstX2I RGATCY 2 cut(s) 888, 1141
BstYI RGATCY 2 cut(s) 888, 1141
BsuRI GGCC 2 cut(s) 132, 854
BtsCI GGATG 4 cut(s) 772, 1087, 1096, 1177
BtsIMutI CAGTG 2 cut(s) 105, 250
BveI ACCTGC 1 cut(s) 964
Cac8I GCNNGC 3 cut(s) 88, 622, 1161
CaiI CAGNNNCTG 1 cut(s) 956
CfoI GCGC 1 cut(s) 86
Cfr10I RCCGGY 1 cut(s) 1159
Cfr13I GGNCC 2 cut(s) 131, 1051
Csp6I GTAC 4 cut(s) 304, 317, 726, 788
CspCI CAANNNNNGTGG 2 cut(s) 1096, 1131
CviAII CATG 6 cut(s) 220, 330, 462, 1001, 1055, 1075
CviQI GTAC 4 cut(s) 304, 317, 726, 788
DdeI CTNAG 6 cut(s) 63, 97, 358, 414, 722, 945
DpnI GATC 9 cut(s) 53, 224, 411, 455, 529, 890, 1086, 1143, 1181
DpnII GATC 9 cut(s) 51, 222, 409, 453, 527, 888, 1084, 1141, 1179
Eam1104I CTCTTC 2 cut(s) 128, 745
EarI CTCTTC 2 cut(s) 128, 745
EciI GGCGGA 1 cut(s) 802
Ecl136II GAGCTC 3 cut(s) 96, 121, 484
Eco130I CCWWGG 1 cut(s) 127
Eco147I AGGCCT 1 cut(s) 854
Eco24I GRGCYC 3 cut(s) 98, 123, 486
Eco47I GGWCC 1 cut(s) 1051
Eco47III AGCGCT 1 cut(s) 85
Eco53kI GAGCTC 3 cut(s) 96, 121, 484
Eco57I CTGAAG 2 cut(s) 591, 1149
Eco88I CYCGRG 1 cut(s) 1041
EcoICRI GAGCTC 3 cut(s) 96, 121, 484
EcoNI CCTNNNNNAGG 1 cut(s) 657
EcoRII CCWGG 1 cut(s) 547
EcoT14I CCWWGG 1 cut(s) 127
EcoT38I GRGCYC 3 cut(s) 98, 123, 486
ErhI CCWWGG 1 cut(s) 127
FaeI CATG 6 cut(s) 223, 333, 465, 1004, 1058, 1078
FalI AAGNNNNNCTT 2 cut(s) 107, 139
FatI CATG 6 cut(s) 219, 329, 461, 1000, 1054, 1074
FbaI TGATCA 2 cut(s) 222, 1179
Fnu4HI GCNGC 4 cut(s) 369, 1035, 1157, 1164
FokI GGATG 4 cut(s) 779, 1094, 1103, 1184
FriOI GRGCYC 3 cut(s) 98, 123, 486
Fsp4HI GCNGC 4 cut(s) 369, 1035, 1157, 1164
FspBI CTAG 3 cut(s) 294, 314, 621
GlaI GCGC 1 cut(s) 85
GluI GCNGC 4 cut(s) 369, 1035, 1157, 1164
GsaI CCCAGC 1 cut(s) 634
HaeII RGCGCY 1 cut(s) 87
HaeIII GGCC 2 cut(s) 132, 854
HapII CCGG 2 cut(s) 840, 1160
HhaI GCGC 1 cut(s) 86
Hin1II CATG 6 cut(s) 223, 333, 465, 1004, 1058, 1078
Hin6I GCGC 1 cut(s) 84
HinP1I GCGC 1 cut(s) 84
HincII GTYRAC 1 cut(s) 241
HindII GTYRAC 1 cut(s) 241
HinfI GANTC 8 cut(s) 202, 289, 297, 470, 611, 989, 997, 1013
HpaII CCGG 2 cut(s) 840, 1160
HphI GGTGA 4 cut(s) 124, 406, 491, 984
Hpy166II GTNNAC 2 cut(s) 241, 502
Hpy188I TCNGA 9 cut(s) 64, 172, 361, 417, 610, 616, 942, 1129, 1146
Hpy188III TCNNGA 7 cut(s) 49, 206, 383, 554, 820, 1041, 1088
Hpy8I GTNNAC 2 cut(s) 241, 502
HpyAV CCTTC 4 cut(s) 50, 109, 343, 1124
HpyCH4III ACNGT 5 cut(s) 245, 344, 421, 710, 730
HpyCH4IV ACGT 1 cut(s) 592
HpyCH4V TGCA 5 cut(s) 371, 658, 701, 959, 1058
HpyF10VI GCNNNNNNNGC 3 cut(s) 102, 319, 980
HpyF3I CTNAG 6 cut(s) 63, 97, 358, 414, 722, 945
HpySE526I ACGT 1 cut(s) 592
Hsp92II CATG 6 cut(s) 223, 333, 465, 1004, 1058, 1078
HspAI GCGC 1 cut(s) 84
KroI GCCGGC 1 cut(s) 1159
KroNI GCCGGC 1 cut(s) 1161
Ksp22I TGATCA 2 cut(s) 222, 1179
Kzo9I GATC 9 cut(s) 51, 222, 409, 453, 527, 888, 1084, 1141, 1179
LguI GCTCTTC 1 cut(s) 128
LmnI GCTCC 3 cut(s) 118, 489, 1062
Lsp1109I GCAGC 4 cut(s) 355, 1021, 1168, 1175
LweI GCATC 4 cut(s) 151, 438, 607, 745
MaeI CTAG 3 cut(s) 294, 314, 621
MaeII ACGT 1 cut(s) 592
MaeIII GTNAC 3 cut(s) 5, 215, 554
MalI GATC 9 cut(s) 53, 224, 411, 455, 529, 890, 1086, 1143, 1181
MboI GATC 9 cut(s) 51, 222, 409, 453, 527, 888, 1084, 1141, 1179
MboII GAAGA 7 cut(s) 115, 170, 298, 732, 926, 1116, 1159
MflI RGATCY 2 cut(s) 888, 1141
MhlI GDGCHC 3 cut(s) 98, 123, 486
MluCI AATT 5 cut(s) 10, 251, 576, 636, 825
MlyI GAGTC 3 cut(s) 306, 620, 1006
MmeI TCCRAC 1 cut(s) 965
MroNI GCCGGC 1 cut(s) 1159
MroXI GAANNNNTTC 4 cut(s) 255, 353, 378, 1123
MseI TTAA 2 cut(s) 336, 524
MspA1I CMGCKG 1 cut(s) 1034
MspI CCGG 2 cut(s) 840, 1160
MspR9I CCNGG 1 cut(s) 549
MvaI CCWGG 1 cut(s) 549
MwoI GCNNNNNNNGC 3 cut(s) 102, 319, 980
NaeI GCCGGC 1 cut(s) 1161
NdeII GATC 9 cut(s) 51, 222, 409, 453, 527, 888, 1084, 1141, 1179
NgoMIV GCCGGC 1 cut(s) 1159
NheI GCTAGC 1 cut(s) 620
NlaIII CATG 6 cut(s) 223, 333, 465, 1004, 1058, 1078
NlaIV GGNNCC 3 cut(s) 545, 573, 1064
NmuCI GTSAC 3 cut(s) 5, 215, 554
NspI RCATGY 1 cut(s) 333
PaeR7I CTCGAG 1 cut(s) 1041
PceI AGGCCT 1 cut(s) 854
PciI ACATGT 1 cut(s) 329
PciSI GCTCTTC 1 cut(s) 128
PdiI GCCGGC 1 cut(s) 1161
PdmI GAANNNNTTC 4 cut(s) 255, 353, 378, 1123
PfeI GAWTC 5 cut(s) 202, 289, 470, 989, 1013
PkrI GCNGC 4 cut(s) 370, 1036, 1158, 1165
PleI GAGTC 3 cut(s) 305, 619, 1005
PpsI GAGTC 3 cut(s) 305, 619, 1005
PscI ACATGT 1 cut(s) 329
Psp124BI GAGCTC 3 cut(s) 98, 123, 486
Psp6I CCWGG 1 cut(s) 547
PspFI CCCAGC 1 cut(s) 630
PspGI CCWGG 1 cut(s) 547
PspN4I GGNNCC 3 cut(s) 545, 573, 1064
PspPI GGNCC 2 cut(s) 131, 1051
PstI CTGCAG 1 cut(s) 373
PstNI CAGNNNCTG 1 cut(s) 956
PsuI RGATCY 2 cut(s) 888, 1141
PvuII CAGCTG 1 cut(s) 1034
RsaI GTAC 4 cut(s) 305, 318, 727, 789
RsaNI GTAC 4 cut(s) 304, 317, 726, 788
SacI GAGCTC 3 cut(s) 98, 123, 486
SapI GCTCTTC 1 cut(s) 128
SaqAI TTAA 2 cut(s) 336, 524
SatI GCNGC 4 cut(s) 369, 1035, 1157, 1164
Sau3AI GATC 9 cut(s) 51, 222, 409, 453, 527, 888, 1084, 1141, 1179
Sau96I GGNCC 2 cut(s) 131, 1051
ScaI AGTACT 2 cut(s) 318, 727
SchI GAGTC 3 cut(s) 306, 620, 1006
ScrFI CCNGG 1 cut(s) 549
SduI GDGCHC 3 cut(s) 98, 123, 486
SfaNI GCATC 4 cut(s) 151, 438, 607, 745
SfcI CTRYAG 1 cut(s) 369
Sfr274I CTCGAG 1 cut(s) 1041
SinI GGWCC 1 cut(s) 1051
SlaI CTCGAG 1 cut(s) 1041
SmlI CTYRAG 3 cut(s) 47, 91, 1041
SmoI CTYRAG 3 cut(s) 47, 91, 1041
Sse9I AATT 5 cut(s) 10, 251, 576, 636, 825
SseBI AGGCCT 1 cut(s) 854
SsiI CCGC 3 cut(s) 274, 487, 813
SspMI CTAG 3 cut(s) 294, 314, 621
SstI GAGCTC 3 cut(s) 98, 123, 486
StuI AGGCCT 1 cut(s) 854
StyD4I CCNGG 1 cut(s) 547
StyI CCWWGG 1 cut(s) 127
TaaI ACNGT 5 cut(s) 245, 344, 421, 710, 730
TaiI ACGT 1 cut(s) 595
TaqI TCGA 7 cut(s) 54, 73, 156, 249, 456, 473, 1042
TasI AATT 5 cut(s) 10, 251, 576, 636, 825
TatI WGTACW 3 cut(s) 316, 725, 787
TfiI GAWTC 5 cut(s) 202, 289, 470, 989, 1013
Tru1I TTAA 2 cut(s) 336, 524
Tru9I TTAA 2 cut(s) 336, 524
TscAI CASTG 2 cut(s) 105, 250
TseFI GTSAC 3 cut(s) 5, 215, 554
TseI GCWGC 4 cut(s) 368, 1034, 1156, 1163
Tsp45I GTSAC 3 cut(s) 5, 215, 554
TspDTI ATGAA 4 cut(s) 215, 927, 938, 1002
TspRI CASTG 2 cut(s) 105, 250
VpaK11BI GGWCC 1 cut(s) 1051
XagI CCTNNNNNAGG 1 cut(s) 657
XapI RAATTY 1 cut(s) 636
XceI RCATGY 1 cut(s) 333
XhoI CTCGAG 1 cut(s) 1041
XmnI GAANNNNTTC 4 cut(s) 255, 353, 378, 1123
XspI CTAG 3 cut(s) 294, 314, 621
ZrmI AGTACT 2 cut(s) 318, 727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.