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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47115 |
| fragaria_vesca | FvH4_1g26530 FvH4_1g26530 |
| malus_domestica | MD09G1288800.v1.1 MD17G1280700.v1.1 |
| prunus_persica | Prupe.3G004800_v2.0.a1 |
| pyrus_communis | pycom09g19580 pycom17g27850 |
| rosa_chinensis | RchiOBHm_Chr3g0486611 |
| rosa_laevigata | RLG00000023073 |
| rosa_multiflora | Rmu_sc0001508.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00395770 |
| rosa_rugosa | Rorug03G0225600 Rorug03G0225700 |
| rosa_samantha | Rh3AG275500 Rh3CG309900 Rh3DG306600 |
| rosa_wichuraiana | Rw3G024550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 965 |
| Acc65I | GGTACC | 1 cut(s) | 524 |
| AccB1I | GGYRCC | 1 cut(s) | 524 |
| AciI | CCGC | 2 cut(s) | 417, 731 |
| AcoI | YGGCCR | 2 cut(s) | 252, 863 |
| AdeI | CACNNNGTG | 1 cut(s) | 345 |
| AfaI | GTAC | 2 cut(s) | 526, 794 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 285, 944 |
| AgsI | TTSAA | 2 cut(s) | 566, 727 |
| AhlI | ACTAGT | 1 cut(s) | 215 |
| AjnI | CCWGG | 2 cut(s) | 238, 687 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 822, 854 |
| AluBI | AGCT | 4 cut(s) | 208, 626, 810, 883 |
| AluI | AGCT | 4 cut(s) | 208, 626, 810, 883 |
| Alw21I | GWGCWC | 1 cut(s) | 178 |
| Alw44I | GTGCAC | 1 cut(s) | 174 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 626 |
| Ama87I | CYCGRG | 1 cut(s) | 878 |
| AoxI | GGCC | 5 cut(s) | 252, 276, 691, 863, 1016 |
| ApaLI | GTGCAC | 1 cut(s) | 174 |
| ApeKI | GCWGC | 2 cut(s) | 711, 810 |
| Asp718I | GGTACC | 1 cut(s) | 524 |
| AspLEI | GCGC | 2 cut(s) | 98, 379 |
| AspS9I | GGNCC | 2 cut(s) | 277, 691 |
| AsuHPI | GGTGA | 1 cut(s) | 677 |
| AsuII | TTCGAA | 1 cut(s) | 111 |
| AvaI | CYCGRG | 1 cut(s) | 878 |
| BaeGI | GKGCMC | 1 cut(s) | 178 |
| BalI | TGGCCA | 2 cut(s) | 254, 865 |
| BanI | GGYRCC | 1 cut(s) | 524 |
| BanII | GRGCYC | 2 cut(s) | 234, 901 |
| Bbv12I | GWGCWC | 1 cut(s) | 178 |
| BbvI | GCAGC | 2 cut(s) | 698, 797 |
| BccI | CCATC | 1 cut(s) | 536 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 299, 333 |
| BciT130I | CCWGG | 2 cut(s) | 240, 689 |
| BciVI | GTATCC | 1 cut(s) | 742 |
| BcuI | ACTAGT | 1 cut(s) | 215 |
| BfaI | CTAG | 3 cut(s) | 147, 216, 1024 |
| BfmI | CTRYAG | 1 cut(s) | 387 |
| BfoI | RGCGCY | 1 cut(s) | 99 |
| BfuI | GTATCC | 1 cut(s) | 742 |
| BisI | GCNGC | 3 cut(s) | 712, 732, 811 |
| BlsI | GCNGC | 3 cut(s) | 713, 733, 812 |
| Bme1390I | CCNGG | 2 cut(s) | 240, 689 |
| BmeT110I | CYCGRG | 1 cut(s) | 878 |
| BmgT120I | GGNCC | 2 cut(s) | 277, 691 |
| BmiI | GGNNCC | 5 cut(s) | 233, 526, 782, 900, 998 |
| BmrFI | CCNGG | 2 cut(s) | 240, 689 |
| BmsI | GCATC | 2 cut(s) | 307, 822 |
| BpmI | CTGGAG | 1 cut(s) | 29 |
| Bpu14I | TTCGAA | 1 cut(s) | 111 |
| BpuEI | CTTGAG | 1 cut(s) | 537 |
| BsaJI | CCNNGG | 6 cut(s) | 182, 238, 688, 776, 857, 893 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 615, 645 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 285, 944 |
| Bse1I | ACTGG | 1 cut(s) | 12 |
| BseBI | CCWGG | 2 cut(s) | 240, 689 |
| BseDI | CCNNGG | 6 cut(s) | 182, 238, 688, 776, 857, 893 |
| BseGI | GGATG | 4 cut(s) | 322, 475, 660, 933 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 285, 944 |
| BseMII | CTCAG | 1 cut(s) | 218 |
| BseNI | ACTGG | 1 cut(s) | 12 |
| BseRI | GAGGAG | 2 cut(s) | 100, 572 |
| BseSI | GKGCMC | 1 cut(s) | 178 |
| BseXI | GCAGC | 2 cut(s) | 698, 797 |
| BseYI | CCCAGC | 2 cut(s) | 284, 379 |
| BsgI | GTGCAG | 1 cut(s) | 639 |
| BshFI | GGCC | 5 cut(s) | 254, 278, 693, 865, 1018 |
| BshNI | GGYRCC | 1 cut(s) | 524 |
| BsiHKAI | GWGCWC | 1 cut(s) | 178 |
| BsiHKCI | CYCGRG | 1 cut(s) | 878 |
| BsiSI | CCGG | 1 cut(s) | 784 |
| BslFI | GGGAC | 1 cut(s) | 457 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 285, 944 |
| BsmFI | GGGAC | 1 cut(s) | 457 |
| BsmI | GAATGC | 2 cut(s) | 605, 733 |
| BsnI | GGCC | 5 cut(s) | 254, 278, 693, 865, 1018 |
| BsoBI | CYCGRG | 1 cut(s) | 878 |
| Bsp119I | TTCGAA | 1 cut(s) | 111 |
| Bsp1286I | GDGCHC | 3 cut(s) | 178, 234, 901 |
| Bsp19I | CCATGG | 2 cut(s) | 857, 893 |
| BspACI | CCGC | 2 cut(s) | 417, 731 |
| BspANI | GGCC | 5 cut(s) | 254, 278, 693, 865, 1018 |
| BspCNI | CTCAG | 1 cut(s) | 217 |
| BspLI | GGNNCC | 5 cut(s) | 233, 526, 782, 900, 998 |
| BspT104I | TTCGAA | 1 cut(s) | 111 |
| BspT107I | GGYRCC | 1 cut(s) | 524 |
| BsrI | ACTGG | 1 cut(s) | 12 |
| BssECI | CCNNGG | 6 cut(s) | 182, 238, 688, 776, 857, 893 |
| BssT1I | CCWWGG | 3 cut(s) | 776, 857, 893 |
| Bst2UI | CCWGG | 2 cut(s) | 240, 689 |
| Bst4CI | ACNGT | 2 cut(s) | 158, 524 |
| Bst6I | CTCTTC | 1 cut(s) | 471 |
| BstBI | TTCGAA | 1 cut(s) | 111 |
| BstC8I | GCNNGC | 1 cut(s) | 716 |
| BstDEI | CTNAG | 1 cut(s) | 204 |
| BstDSI | CCRYGG | 2 cut(s) | 857, 893 |
| BstF5I | GGATG | 4 cut(s) | 322, 475, 660, 933 |
| BstH2I | RGCGCY | 1 cut(s) | 99 |
| BstHHI | GCGC | 2 cut(s) | 98, 379 |
| BstNI | CCWGG | 2 cut(s) | 240, 689 |
| BstNSI | RCATGY | 1 cut(s) | 718 |
| BstSCI | CCNGG | 2 cut(s) | 238, 687 |
| BstSFI | CTRYAG | 1 cut(s) | 387 |
| BstSLI | GKGCMC | 1 cut(s) | 178 |
| BstV1I | GCAGC | 2 cut(s) | 698, 797 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 777 |
| BsuI | GTATCC | 1 cut(s) | 742 |
| BsuRI | GGCC | 5 cut(s) | 254, 278, 693, 865, 1018 |
| BtgI | CCRYGG | 2 cut(s) | 857, 893 |
| BtsCI | GGATG | 4 cut(s) | 322, 475, 660, 933 |
| BtsI | GCAGTG | 1 cut(s) | 176 |
| BtsIMutI | CAGTG | 3 cut(s) | 5, 163, 176 |
| Cac8I | GCNNGC | 1 cut(s) | 716 |
| CaiI | CAGNNNCTG | 1 cut(s) | 626 |
| CfoI | GCGC | 2 cut(s) | 98, 379 |
| Cfr13I | GGNCC | 2 cut(s) | 277, 691 |
| Csp6I | GTAC | 2 cut(s) | 525, 793 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 224, 259 |
| CviAII | CATG | 5 cut(s) | 191, 715, 842, 858, 894 |
| CviQI | GTAC | 2 cut(s) | 525, 793 |
| DdeI | CTNAG | 1 cut(s) | 204 |
| DraIII | CACNNNGTG | 1 cut(s) | 345 |
| EaeI | YGGCCR | 2 cut(s) | 252, 863 |
| Eam1104I | CTCTTC | 1 cut(s) | 471 |
| EarI | CTCTTC | 1 cut(s) | 471 |
| Eco130I | CCWWGG | 3 cut(s) | 776, 857, 893 |
| Eco24I | GRGCYC | 2 cut(s) | 234, 901 |
| Eco32I | GATATC | 1 cut(s) | 590 |
| Eco88I | CYCGRG | 1 cut(s) | 878 |
| EcoRII | CCWGG | 2 cut(s) | 238, 687 |
| EcoRV | GATATC | 1 cut(s) | 590 |
| EcoT14I | CCWWGG | 3 cut(s) | 776, 857, 893 |
| EcoT22I | ATGCAT | 2 cut(s) | 720, 847 |
| EcoT38I | GRGCYC | 2 cut(s) | 234, 901 |
| ErhI | CCWWGG | 3 cut(s) | 776, 857, 893 |
| FaeI | CATG | 5 cut(s) | 194, 718, 845, 861, 897 |
| FaqI | GGGAC | 1 cut(s) | 457 |
| FatI | CATG | 5 cut(s) | 190, 714, 841, 857, 893 |
| FauNDI | CATATG | 1 cut(s) | 400 |
| Fnu4HI | GCNGC | 3 cut(s) | 712, 732, 811 |
| FokI | GGATG | 4 cut(s) | 329, 482, 647, 920 |
| FriOI | GRGCYC | 2 cut(s) | 234, 901 |
| Fsp4HI | GCNGC | 3 cut(s) | 712, 732, 811 |
| FspBI | CTAG | 3 cut(s) | 147, 216, 1024 |
| GlaI | GCGC | 2 cut(s) | 97, 378 |
| GluI | GCNGC | 3 cut(s) | 712, 732, 811 |
| GsaI | CCCAGC | 2 cut(s) | 288, 383 |
| GsuI | CTGGAG | 1 cut(s) | 29 |
| HaeII | RGCGCY | 1 cut(s) | 99 |
| HaeIII | GGCC | 5 cut(s) | 254, 278, 693, 865, 1018 |
| HapII | CCGG | 1 cut(s) | 784 |
| HhaI | GCGC | 2 cut(s) | 98, 379 |
| Hin1II | CATG | 5 cut(s) | 194, 718, 845, 861, 897 |
| Hin6I | GCGC | 2 cut(s) | 96, 377 |
| HinP1I | GCGC | 2 cut(s) | 96, 377 |
| HinfI | GANTC | 4 cut(s) | 108, 455, 489, 562 |
| HpaII | CCGG | 1 cut(s) | 784 |
| HphI | GGTGA | 1 cut(s) | 677 |
| Hpy166II | GTNNAC | 3 cut(s) | 176, 348, 931 |
| Hpy188I | TCNGA | 1 cut(s) | 436 |
| Hpy188III | TCNNGA | 4 cut(s) | 292, 554, 610, 746 |
| Hpy8I | GTNNAC | 3 cut(s) | 176, 348, 931 |
| HpyAV | CCTTC | 3 cut(s) | 86, 146, 776 |
| HpyCH4III | ACNGT | 2 cut(s) | 158, 524 |
| HpyCH4IV | ACGT | 2 cut(s) | 356, 701 |
| HpyF3I | CTNAG | 1 cut(s) | 204 |
| HpySE526I | ACGT | 2 cut(s) | 356, 701 |
| Hsp92II | CATG | 5 cut(s) | 194, 718, 845, 861, 897 |
| HspAI | GCGC | 2 cut(s) | 96, 377 |
| KpnI | GGTACC | 1 cut(s) | 528 |
| LmnI | GCTCC | 4 cut(s) | 237, 623, 807, 904 |
| Lsp1109I | GCAGC | 2 cut(s) | 698, 797 |
| LweI | GCATC | 2 cut(s) | 307, 822 |
| MaeI | CTAG | 3 cut(s) | 147, 216, 1024 |
| MaeII | ACGT | 2 cut(s) | 356, 701 |
| MaeIII | GTNAC | 1 cut(s) | 142 |
| MboII | GAAGA | 5 cut(s) | 125, 488, 731, 734, 817 |
| MhlI | GDGCHC | 3 cut(s) | 178, 234, 901 |
| MlsI | TGGCCA | 2 cut(s) | 254, 865 |
| MluCI | AATT | 3 cut(s) | 516, 533, 960 |
| MluNI | TGGCCA | 2 cut(s) | 254, 865 |
| Mox20I | TGGCCA | 2 cut(s) | 254, 865 |
| Mph1103I | ATGCAT | 2 cut(s) | 720, 847 |
| MscI | TGGCCA | 2 cut(s) | 254, 865 |
| MseI | TTAA | 3 cut(s) | 519, 759, 885 |
| Msp20I | TGGCCA | 2 cut(s) | 254, 865 |
| MspI | CCGG | 1 cut(s) | 784 |
| MspR9I | CCNGG | 2 cut(s) | 240, 689 |
| Mva1269I | GAATGC | 2 cut(s) | 605, 733 |
| MvaI | CCWGG | 2 cut(s) | 240, 689 |
| NcoI | CCATGG | 2 cut(s) | 857, 893 |
| NdeI | CATATG | 1 cut(s) | 400 |
| NlaIII | CATG | 5 cut(s) | 194, 718, 845, 861, 897 |
| NlaIV | GGNNCC | 5 cut(s) | 233, 526, 782, 900, 998 |
| NmeAIII | GCCGAG | 1 cut(s) | 207 |
| NmuCI | GTSAC | 1 cut(s) | 142 |
| NsiI | ATGCAT | 2 cut(s) | 720, 847 |
| NspI | RCATGY | 1 cut(s) | 718 |
| NspV | TTCGAA | 1 cut(s) | 111 |
| PaeI | GCATGC | 1 cut(s) | 718 |
| PaeR7I | CTCGAG | 1 cut(s) | 878 |
| PctI | GAATGC | 2 cut(s) | 605, 733 |
| PfeI | GAWTC | 4 cut(s) | 108, 455, 489, 562 |
| PflFI | GACNNNGTC | 1 cut(s) | 644 |
| PkrI | GCNGC | 3 cut(s) | 713, 733, 812 |
| PsiI | TTATAA | 1 cut(s) | 965 |
| Psp6I | CCWGG | 2 cut(s) | 238, 687 |
| PspFI | CCCAGC | 2 cut(s) | 284, 379 |
| PspGI | CCWGG | 2 cut(s) | 238, 687 |
| PspN4I | GGNNCC | 5 cut(s) | 233, 526, 782, 900, 998 |
| PspPI | GGNCC | 2 cut(s) | 277, 691 |
| PspXI | VCTCGAGB | 1 cut(s) | 878 |
| PstNI | CAGNNNCTG | 1 cut(s) | 626 |
| PsyI | GACNNNGTC | 1 cut(s) | 644 |
| RsaI | GTAC | 2 cut(s) | 526, 794 |
| RsaNI | GTAC | 2 cut(s) | 525, 793 |
| SaqAI | TTAA | 3 cut(s) | 519, 759, 885 |
| SatI | GCNGC | 3 cut(s) | 712, 732, 811 |
| Sau96I | GGNCC | 2 cut(s) | 277, 691 |
| ScrFI | CCNGG | 2 cut(s) | 240, 689 |
| SduI | GDGCHC | 3 cut(s) | 178, 234, 901 |
| SfaNI | GCATC | 2 cut(s) | 307, 822 |
| SfcI | CTRYAG | 1 cut(s) | 387 |
| Sfr274I | CTCGAG | 1 cut(s) | 878 |
| SfuI | TTCGAA | 1 cut(s) | 111 |
| SlaI | CTCGAG | 1 cut(s) | 878 |
| SmlI | CTYRAG | 2 cut(s) | 552, 878 |
| SmoI | CTYRAG | 2 cut(s) | 552, 878 |
| SpeI | ACTAGT | 1 cut(s) | 215 |
| SphI | GCATGC | 1 cut(s) | 718 |
| Sse9I | AATT | 3 cut(s) | 516, 533, 960 |
| SsiI | CCGC | 2 cut(s) | 417, 731 |
| SspMI | CTAG | 3 cut(s) | 147, 216, 1024 |
| StyD4I | CCNGG | 2 cut(s) | 238, 687 |
| StyI | CCWWGG | 3 cut(s) | 776, 857, 893 |
| TaaI | ACNGT | 2 cut(s) | 158, 524 |
| TaiI | ACGT | 2 cut(s) | 359, 704 |
| TaqI | TCGA | 4 cut(s) | 111, 259, 309, 879 |
| TasI | AATT | 3 cut(s) | 516, 533, 960 |
| TauI | GCSGC | 1 cut(s) | 734 |
| TfiI | GAWTC | 4 cut(s) | 108, 455, 489, 562 |
| Tru1I | TTAA | 3 cut(s) | 519, 759, 885 |
| Tru9I | TTAA | 3 cut(s) | 519, 759, 885 |
| TscAI | CASTG | 3 cut(s) | 12, 163, 183 |
| TseFI | GTSAC | 1 cut(s) | 142 |
| TseI | GCWGC | 2 cut(s) | 711, 810 |
| Tsp45I | GTSAC | 1 cut(s) | 142 |
| TspDTI | ATGAA | 1 cut(s) | 830 |
| TspRI | CASTG | 3 cut(s) | 12, 163, 183 |
| Tth111I | GACNNNGTC | 1 cut(s) | 644 |
| VneI | GTGCAC | 1 cut(s) | 174 |
| XceI | RCATGY | 1 cut(s) | 718 |
| XhoI | CTCGAG | 1 cut(s) | 878 |
| XspI | CTAG | 3 cut(s) | 147, 216, 1024 |
| Zsp2I | ATGCAT | 2 cut(s) | 720, 847 |