Nodal modulator
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G62360 AT3G62360 |
| fragaria_vesca | FvH4_1g27060 |
| malus_domestica | MD09G1284300.v1.1 MD17G1277500.v1.1 |
| prunus_persica | Prupe.3G010500_v2.0.a1 Prupe.3G010500_v2.0.a1 Prupe.3G010500_v2.0.a1 |
| pyrus_communis | pycom17g27510 |
| rosa_chinensis | RchiOBHm_Chr3g0487381 |
| rosa_laevigata | RLG00000023009 |
| rosa_multiflora | Rmu_sc0001955.1_g000004 |
| rosa_roxburghii | Rroxscaffold_6G00394840 |
| rosa_rugosa | Rorug03G0233600 |
| rosa_samantha | Rh3AG281600 Rh3BG317200 Rh3CG315300 Rh3DG313200 |
| rosa_wichuraiana | Rw3G024930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 741 |
| Acc36I | ACCTGC | 1 cut(s) | 1678 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2306 |
| AccI | GTMKAC | 2 cut(s) | 750, 2067 |
| AciI | CCGC | 4 cut(s) | 90, 414, 2392, 3565 |
| AclWI | GGATC | 2 cut(s) | 2341, 3411 |
| AcoI | YGGCCR | 3 cut(s) | 991, 2563, 2860 |
| AcsI | RAATTY | 5 cut(s) | 1463, 1604, 1751, 2056, 2568 |
| AcuI | CTGAAG | 3 cut(s) | 1173, 2601, 2756 |
| AcyI | GRCGYC | 2 cut(s) | 15, 738 |
| AdeI | CACNNNGTG | 1 cut(s) | 1355 |
| AfaI | GTAC | 3 cut(s) | 208, 1495, 2424 |
| AfeI | AGCGCT | 1 cut(s) | 3019 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 310, 707, 2306, 2460, 2873, 3256, 3415, 3533 |
| AflII | CTTAAG | 1 cut(s) | 2405 |
| AflIII | ACRYGT | 3 cut(s) | 943, 3370, 3390 |
| AhlI | ACTAGT | 1 cut(s) | 1244 |
| AjiI | CACGTC | 1 cut(s) | 1459 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1151, 1183 |
| AleI | CACNNNNGTG | 1 cut(s) | 84 |
| Alw21I | GWGCWC | 2 cut(s) | 220, 867 |
| Alw26I | GTCTC | 2 cut(s) | 2344, 3107 |
| AlwI | GGATC | 2 cut(s) | 2341, 3411 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 929, 2669, 2930, 3047 |
| Ama87I | CYCGRG | 2 cut(s) | 2202, 2817 |
| Aor51HI | AGCGCT | 1 cut(s) | 3019 |
| ApeKI | GCWGC | 7 cut(s) | 339, 1379, 1673, 2144, 2378, 3286, 3312 |
| ApoI | RAATTY | 5 cut(s) | 1463, 1604, 1751, 2056, 2568 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1567, 1599 |
| AseI | ATTAAT | 1 cut(s) | 360 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 312, 1755 |
| AspLEI | GCGC | 1 cut(s) | 3020 |
| AsuC2I | CCSGG | 1 cut(s) | 3534 |
| AsuHPI | GGTGA | 8 cut(s) | 494, 622, 900, 1367, 2426, 3030, 3265, 3398 |
| AsuNHI | GCTAGC | 1 cut(s) | 104 |
| AvaI | CYCGRG | 2 cut(s) | 2202, 2817 |
| AvaII | GGWCC | 4 cut(s) | 443, 1059, 2103, 2465 |
| AxyI | CCTNAGG | 1 cut(s) | 3267 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1973, 2006 |
| BalI | TGGCCA | 2 cut(s) | 2565, 2862 |
| BanII | GRGCYC | 1 cut(s) | 867 |
| BauI | CACGAG | 1 cut(s) | 1912 |
| BbsI | GAAGAC | 1 cut(s) | 3293 |
| Bbv12I | GWGCWC | 2 cut(s) | 220, 867 |
| BbvI | GCAGC | 7 cut(s) | 326, 1391, 1685, 2131, 2365, 3298, 3324 |
| BceAI | ACGGC | 1 cut(s) | 978 |
| BclI | TGATCA | 2 cut(s) | 117, 328 |
| BcnI | CCSGG | 1 cut(s) | 3534 |
| BcoDI | GTCTC | 2 cut(s) | 2344, 3107 |
| BcuI | ACTAGT | 1 cut(s) | 1244 |
| BfaI | CTAG | 6 cut(s) | 105, 1245, 2112, 2793, 3195, 3297 |
| BfmI | CTRYAG | 5 cut(s) | 1497, 1671, 1677, 2650, 3284 |
| BfoI | RGCGCY | 1 cut(s) | 3021 |
| BfrI | CTTAAG | 1 cut(s) | 2405 |
| BfuAI | ACCTGC | 1 cut(s) | 1678 |
| BglII | AGATCT | 1 cut(s) | 2232 |
| BisI | GCNGC | 9 cut(s) | 91, 340, 1380, 1674, 2145, 2379, 2392, 3287, 3313 |
| BlsI | GCNGC | 9 cut(s) | 92, 341, 1381, 1675, 2146, 2380, 2393, 3288, 3314 |
| BmcAI | AGTACT | 2 cut(s) | 208, 2424 |
| Bme18I | GGWCC | 4 cut(s) | 443, 1059, 2103, 2465 |
| BmeT110I | CYCGRG | 2 cut(s) | 2202, 2817 |
| BmgBI | CACGTC | 1 cut(s) | 1459 |
| BmiI | GGNNCC | 7 cut(s) | 302, 315, 1347, 2104, 2452, 2466, 2683 |
| BmrI | ACTGGG | 1 cut(s) | 1780 |
| BmsI | GCATC | 7 cut(s) | 15, 130, 805, 946, 1792, 2587, 3044 |
| BmtI | GCTAGC | 1 cut(s) | 108 |
| BmuI | ACTGGG | 1 cut(s) | 1780 |
| BpiI | GAAGAC | 1 cut(s) | 3293 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 92, 124 |
| BpmI | CTGGAG | 5 cut(s) | 1905, 2403, 2691, 2742, 3411 |
| Bpu10I | CCTNAGC | 1 cut(s) | 176 |
| BpuEI | CTTGAG | 1 cut(s) | 1287 |
| BpuMI | CCSGG | 1 cut(s) | 3534 |
| Bsa29I | ATCGAT | 2 cut(s) | 842, 1428 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2899 |
| BsaHI | GRCGYC | 2 cut(s) | 15, 738 |
| BsaWI | WCCGGW | 1 cut(s) | 3291 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 702, 732, 3447, 3477 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 310, 707, 2306, 2460, 2873, 3256, 3415, 3533 |
| Bse1I | ACTGG | 8 cut(s) | 60, 340, 484, 979, 1775, 2124, 2769, 3434 |
| Bse21I | CCTNAGG | 1 cut(s) | 3267 |
| Bse3DI | GCAATG | 2 cut(s) | 349, 2394 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2899 |
| BseCI | ATCGAT | 2 cut(s) | 842, 1428 |
| BseGI | GGATG | 8 cut(s) | 145, 296, 571, 739, 831, 1623, 1726, 2452 |
| BseJI | GATNNNNATC | 1 cut(s) | 2899 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 310, 707, 2306, 2460, 2873, 3256, 3415, 3533 |
| BseMI | GCAATG | 2 cut(s) | 349, 2394 |
| BseMII | CTCAG | 7 cut(s) | 704, 1380, 1484, 1874, 2043, 2676, 3321 |
| BseNI | ACTGG | 8 cut(s) | 60, 340, 484, 979, 1775, 2124, 2769, 3434 |
| BseXI | GCAGC | 7 cut(s) | 326, 1391, 1685, 2131, 2365, 3298, 3324 |
| BseYI | CCCAGC | 1 cut(s) | 1695 |
| BshVI | ATCGAT | 2 cut(s) | 842, 1428 |
| BsiHKAI | GWGCWC | 2 cut(s) | 220, 867 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2202, 2817 |
| BsiSI | CCGG | 2 cut(s) | 3292, 3534 |
| BslFI | GGGAC | 4 cut(s) | 641, 741, 2116, 2725 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 310, 707, 2306, 2460, 2873, 3256, 3415, 3533 |
| BsmAI | GTCTC | 2 cut(s) | 2344, 3107 |
| BsmFI | GGGAC | 4 cut(s) | 641, 741, 2116, 2725 |
| BsmI | GAATGC | 1 cut(s) | 3163 |
| BsoBI | CYCGRG | 2 cut(s) | 2202, 2817 |
| Bsp1286I | GDGCHC | 2 cut(s) | 220, 867 |
| Bsp143I | GATC | 8 cut(s) | 117, 328, 839, 2232, 2333, 2773, 2894, 3403 |
| Bsp19I | CCATGG | 1 cut(s) | 2835 |
| BspACI | CCGC | 4 cut(s) | 90, 414, 2392, 3565 |
| BspCNI | CTCAG | 7 cut(s) | 703, 1381, 1483, 1873, 2044, 2675, 3322 |
| BspDI | ATCGAT | 2 cut(s) | 842, 1428 |
| BspHI | TCATGA | 1 cut(s) | 1051 |
| BspLI | GGNNCC | 7 cut(s) | 302, 315, 1347, 2104, 2452, 2466, 2683 |
| BspMAI | CTGCAG | 2 cut(s) | 1675, 3288 |
| BspMI | ACCTGC | 1 cut(s) | 1678 |
| BspOI | GCTAGC | 1 cut(s) | 108 |
| BspPI | GGATC | 2 cut(s) | 2341, 3411 |
| BspQI | GCTCTTC | 1 cut(s) | 115 |
| BspTI | CTTAAG | 1 cut(s) | 2405 |
| BsrDI | GCAATG | 2 cut(s) | 349, 2394 |
| BsrI | ACTGG | 8 cut(s) | 60, 340, 484, 979, 1775, 2124, 2769, 3434 |
| BssMI | GATC | 8 cut(s) | 117, 328, 839, 2232, 2333, 2773, 2894, 3403 |
| BssNI | GRCGYC | 2 cut(s) | 15, 738 |
| BssSI | CACGAG | 1 cut(s) | 1912 |
| BssT1I | CCWWGG | 3 cut(s) | 760, 2835, 3488 |
| Bst2BI | CACGAG | 1 cut(s) | 1912 |
| Bst6I | CTCTTC | 3 cut(s) | 115, 1563, 3234 |
| BstACI | GRCGYC | 2 cut(s) | 15, 738 |
| BstAFI | CTTAAG | 1 cut(s) | 2405 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3283 |
| BstC8I | GCNNGC | 3 cut(s) | 106, 1504, 3033 |
| BstDSI | CCRYGG | 4 cut(s) | 79, 135, 2835, 3513 |
| BstF5I | GGATG | 8 cut(s) | 145, 296, 571, 739, 831, 1623, 1726, 2452 |
| BstH2I | RGCGCY | 1 cut(s) | 3021 |
| BstHHI | GCGC | 1 cut(s) | 3020 |
| BstKTI | GATC | 8 cut(s) | 120, 331, 842, 2235, 2336, 2776, 2897, 3406 |
| BstMAI | GTCTC | 2 cut(s) | 2344, 3107 |
| BstMBI | GATC | 8 cut(s) | 117, 328, 839, 2232, 2333, 2773, 2894, 3403 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 420, 1124, 1268, 1379, 2646, 2831, 3283 |
| BstNSI | RCATGY | 3 cut(s) | 947, 3374, 3394 |
| BstSFI | CTRYAG | 5 cut(s) | 1497, 1671, 1677, 2650, 3284 |
| BstV1I | GCAGC | 7 cut(s) | 326, 1391, 1685, 2131, 2365, 3298, 3324 |
| BstV2I | GAAGAC | 1 cut(s) | 3293 |
| BstX2I | RGATCY | 1 cut(s) | 2232 |
| BstXI | CCANNNNNNTGG | 5 cut(s) | 86, 291, 767, 974, 2842 |
| BstYI | RGATCY | 1 cut(s) | 2232 |
| Bsu15I | ATCGAT | 2 cut(s) | 842, 1428 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3267 |
| BsuTUI | ATCGAT | 2 cut(s) | 842, 1428 |
| BtgI | CCRYGG | 4 cut(s) | 79, 135, 2835, 3513 |
| BtgZI | GCGATG | 2 cut(s) | 1947, 2655 |
| BtrI | CACGTC | 1 cut(s) | 1459 |
| BtsCI | GGATG | 8 cut(s) | 145, 296, 571, 739, 831, 1623, 1726, 2452 |
| BtsIMutI | CAGTG | 9 cut(s) | 972, 1065, 2017, 2131, 2497, 2625, 2762, 2836, 2931 |
| BveI | ACCTGC | 1 cut(s) | 1678 |
| Cac8I | GCNNGC | 3 cut(s) | 106, 1504, 3033 |
| CaiI | CAGNNNCTG | 4 cut(s) | 929, 2669, 2930, 3047 |
| CciI | TCATGA | 1 cut(s) | 1051 |
| CfoI | GCGC | 1 cut(s) | 3020 |
| ClaI | ATCGAT | 2 cut(s) | 842, 1428 |
| CseI | GACGC | 1 cut(s) | 23 |
| CsiI | ACCWGGT | 2 cut(s) | 1095, 1351 |
| Csp6I | GTAC | 3 cut(s) | 207, 1494, 2423 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1471, 1506 |
| CviQI | GTAC | 3 cut(s) | 207, 1494, 2423 |
| DpnI | GATC | 8 cut(s) | 119, 330, 841, 2234, 2335, 2775, 2896, 3405 |
| DpnII | GATC | 8 cut(s) | 117, 328, 839, 2232, 2333, 2773, 2894, 3403 |
| DraI | TTTAAA | 1 cut(s) | 3397 |
| DraIII | CACNNNGTG | 1 cut(s) | 1355 |
| EaeI | YGGCCR | 3 cut(s) | 991, 2563, 2860 |
| Eam1104I | CTCTTC | 3 cut(s) | 115, 1563, 3234 |
| EarI | CTCTTC | 3 cut(s) | 115, 1563, 3234 |
| EciI | GGCGGA | 1 cut(s) | 429 |
| Ecl136II | GAGCTC | 1 cut(s) | 865 |
| Eco130I | CCWWGG | 3 cut(s) | 760, 2835, 3488 |
| Eco24I | GRGCYC | 1 cut(s) | 867 |
| Eco32I | GATATC | 1 cut(s) | 3076 |
| Eco47I | GGWCC | 4 cut(s) | 443, 1059, 2103, 2465 |
| Eco47III | AGCGCT | 1 cut(s) | 3019 |
| Eco53kI | GAGCTC | 1 cut(s) | 865 |
| Eco57I | CTGAAG | 3 cut(s) | 1173, 2601, 2756 |
| Eco81I | CCTNAGG | 1 cut(s) | 3267 |
| Eco88I | CYCGRG | 2 cut(s) | 2202, 2817 |
| EcoICRI | GAGCTC | 1 cut(s) | 865 |
| EcoO109I | RGGNCCY | 3 cut(s) | 443, 793, 2465 |
| EcoRV | GATATC | 1 cut(s) | 3076 |
| EcoT14I | CCWWGG | 3 cut(s) | 760, 2835, 3488 |
| EcoT38I | GRGCYC | 1 cut(s) | 867 |
| ErhI | CCWWGG | 3 cut(s) | 760, 2835, 3488 |
| FalI | AAGNNNNNCTT | 5 cut(s) | 450, 482, 2172, 2204, 3574 |
| FaqI | GGGAC | 4 cut(s) | 641, 741, 2116, 2725 |
| FbaI | TGATCA | 2 cut(s) | 117, 328 |
| FblI | GTMKAC | 2 cut(s) | 750, 2067 |
| Fnu4HI | GCNGC | 9 cut(s) | 91, 340, 1380, 1674, 2145, 2379, 2392, 3287, 3313 |
| FokI | GGATG | 8 cut(s) | 152, 303, 558, 746, 838, 1610, 1733, 2459 |
| FriOI | GRGCYC | 1 cut(s) | 867 |
| Fsp4HI | GCNGC | 9 cut(s) | 91, 340, 1380, 1674, 2145, 2379, 2392, 3287, 3313 |
| FspBI | CTAG | 6 cut(s) | 105, 1245, 2112, 2793, 3195, 3297 |
| GlaI | GCGC | 1 cut(s) | 3019 |
| GluI | GCNGC | 9 cut(s) | 91, 340, 1380, 1674, 2145, 2379, 2392, 3287, 3313 |
| GsaI | CCCAGC | 1 cut(s) | 1699 |
| GsuI | CTGGAG | 5 cut(s) | 1905, 2403, 2691, 2742, 3411 |
| HaeII | RGCGCY | 1 cut(s) | 3021 |
| HapII | CCGG | 2 cut(s) | 3292, 3534 |
| HgaI | GACGC | 1 cut(s) | 23 |
| HhaI | GCGC | 1 cut(s) | 3020 |
| Hin1I | GRCGYC | 2 cut(s) | 15, 738 |
| Hin6I | GCGC | 1 cut(s) | 3018 |
| HinP1I | GCGC | 1 cut(s) | 3018 |
| HincII | GTYRAC | 4 cut(s) | 640, 1003, 1909, 2068 |
| HindII | GTYRAC | 4 cut(s) | 640, 1003, 1909, 2068 |
| HindIII | AAGCTT | 3 cut(s) | 1088, 2286, 2558 |
| HpaII | CCGG | 2 cut(s) | 3292, 3534 |
| HphI | GGTGA | 8 cut(s) | 494, 622, 900, 1367, 2426, 3030, 3265, 3398 |
| Hpy166II | GTNNAC | 7 cut(s) | 372, 640, 751, 1003, 1559, 1909, 2068 |
| Hpy8I | GTNNAC | 7 cut(s) | 372, 640, 751, 1003, 1559, 1909, 2068 |
| Hpy99I | CGWCG | 3 cut(s) | 41, 101, 1739 |
| HpyCH4IV | ACGT | 6 cut(s) | 562, 738, 1458, 1620, 1737, 3135 |
| HpyCH4V | TGCA | 9 cut(s) | 342, 1118, 1506, 1673, 1891, 3035, 3163, 3286, 3551 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 420, 1124, 1268, 1379, 2646, 2831, 3283 |
| HpySE526I | ACGT | 6 cut(s) | 562, 738, 1458, 1620, 1737, 3135 |
| Hsp92I | GRCGYC | 2 cut(s) | 15, 738 |
| HspAI | GCGC | 1 cut(s) | 3018 |
| Ksp22I | TGATCA | 2 cut(s) | 117, 328 |
| Kzo9I | GATC | 8 cut(s) | 117, 328, 839, 2232, 2333, 2773, 2894, 3403 |
| LguI | GCTCTTC | 1 cut(s) | 115 |
| LmnI | GCTCC | 8 cut(s) | 223, 404, 420, 934, 1699, 1929, 2672, 3294 |
| Lsp1109I | GCAGC | 7 cut(s) | 326, 1391, 1685, 2131, 2365, 3298, 3324 |
| LweI | GCATC | 7 cut(s) | 15, 130, 805, 946, 1792, 2587, 3044 |
| MabI | ACCWGGT | 2 cut(s) | 1095, 1351 |
| MaeI | CTAG | 6 cut(s) | 105, 1245, 2112, 2793, 3195, 3297 |
| MaeII | ACGT | 6 cut(s) | 562, 738, 1458, 1620, 1737, 3135 |
| MalI | GATC | 8 cut(s) | 119, 330, 841, 2234, 2335, 2775, 2896, 3405 |
| MboI | GATC | 8 cut(s) | 117, 328, 839, 2232, 2333, 2773, 2894, 3403 |
| MfeI | CAATTG | 1 cut(s) | 1938 |
| MflI | RGATCY | 1 cut(s) | 2232 |
| MhlI | GDGCHC | 2 cut(s) | 220, 867 |
| MlsI | TGGCCA | 2 cut(s) | 2565, 2862 |
| MluNI | TGGCCA | 2 cut(s) | 2565, 2862 |
| MlyI | GAGTC | 8 cut(s) | 405, 1270, 1807, 2798, 2955, 3224, 3418, 3465 |
| MmeI | TCCRAC | 3 cut(s) | 527, 3264, 3433 |
| Mox20I | TGGCCA | 2 cut(s) | 2565, 2862 |
| MroXI | GAANNNNTTC | 2 cut(s) | 312, 1755 |
| MscI | TGGCCA | 2 cut(s) | 2565, 2862 |
| MslI | CAYNNNNRTG | 5 cut(s) | 84, 942, 1715, 2840, 3369 |
| Msp20I | TGGCCA | 2 cut(s) | 2565, 2862 |
| MspA1I | CMGCKG | 1 cut(s) | 1676 |
| MspCI | CTTAAG | 1 cut(s) | 2405 |
| MspI | CCGG | 2 cut(s) | 3292, 3534 |
| MunI | CAATTG | 1 cut(s) | 1938 |
| Mva1269I | GAATGC | 1 cut(s) | 3163 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 420, 1124, 1268, 1379, 2646, 2831, 3283 |
| NciI | CCSGG | 1 cut(s) | 3534 |
| NcoI | CCATGG | 1 cut(s) | 2835 |
| NdeII | GATC | 8 cut(s) | 117, 328, 839, 2232, 2333, 2773, 2894, 3403 |
| NheI | GCTAGC | 1 cut(s) | 104 |
| NlaIV | GGNNCC | 7 cut(s) | 302, 315, 1347, 2104, 2452, 2466, 2683 |
| NmuCI | GTSAC | 4 cut(s) | 946, 970, 2845, 2926 |
| NspI | RCATGY | 3 cut(s) | 947, 3374, 3394 |
| OliI | CACNNNNGTG | 1 cut(s) | 84 |
| PaeR7I | CTCGAG | 1 cut(s) | 2817 |
| PagI | TCATGA | 1 cut(s) | 1051 |
| PasI | CCCWGGG | 2 cut(s) | 659, 1628 |
| PciI | ACATGT | 3 cut(s) | 943, 3370, 3390 |
| PciSI | GCTCTTC | 1 cut(s) | 115 |
| PctI | GAATGC | 1 cut(s) | 3163 |
| PdmI | GAANNNNTTC | 2 cut(s) | 312, 1755 |
| PfeI | GAWTC | 9 cut(s) | 71, 1035, 2207, 2371, 2900, 2933, 3044, 3326, 3537 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2306 |
| PfoI | TCCNGGA | 2 cut(s) | 544, 1882 |
| PkrI | GCNGC | 9 cut(s) | 92, 341, 1381, 1675, 2146, 2380, 2393, 3288, 3314 |
| PleI | GAGTC | 8 cut(s) | 404, 1270, 1807, 2797, 2955, 3223, 3418, 3464 |
| PpsI | GAGTC | 8 cut(s) | 404, 1270, 1807, 2797, 2955, 3223, 3418, 3464 |
| PpuMI | RGGWCCY | 2 cut(s) | 443, 2465 |
| PscI | ACATGT | 3 cut(s) | 943, 3370, 3390 |
| PshBI | ATTAAT | 1 cut(s) | 360 |
| Psp124BI | GAGCTC | 1 cut(s) | 867 |
| Psp5II | RGGWCCY | 2 cut(s) | 443, 2465 |
| PspFI | CCCAGC | 1 cut(s) | 1695 |
| PspN4I | GGNNCC | 7 cut(s) | 302, 315, 1347, 2104, 2452, 2466, 2683 |
| PspPPI | RGGWCCY | 2 cut(s) | 443, 2465 |
| PspXI | VCTCGAGB | 1 cut(s) | 2817 |
| PstI | CTGCAG | 2 cut(s) | 1675, 3288 |
| PstNI | CAGNNNCTG | 4 cut(s) | 929, 2669, 2930, 3047 |
| PsuI | RGATCY | 1 cut(s) | 2232 |
| PvuII | CAGCTG | 1 cut(s) | 1676 |
| RsaI | GTAC | 3 cut(s) | 208, 1495, 2424 |
| RsaNI | GTAC | 3 cut(s) | 207, 1494, 2423 |
| RseI | CAYNNNNRTG | 5 cut(s) | 84, 942, 1715, 2840, 3369 |
| SacI | GAGCTC | 1 cut(s) | 867 |
| SalI | GTCGAC | 1 cut(s) | 2066 |
| SapI | GCTCTTC | 1 cut(s) | 115 |
| SatI | GCNGC | 9 cut(s) | 91, 340, 1380, 1674, 2145, 2379, 2392, 3287, 3313 |
| Sau3AI | GATC | 8 cut(s) | 117, 328, 839, 2232, 2333, 2773, 2894, 3403 |
| ScaI | AGTACT | 2 cut(s) | 208, 2424 |
| SchI | GAGTC | 8 cut(s) | 405, 1270, 1807, 2798, 2955, 3224, 3418, 3465 |
| SduI | GDGCHC | 2 cut(s) | 220, 867 |
| SexAI | ACCWGGT | 2 cut(s) | 1095, 1351 |
| SfaNI | GCATC | 7 cut(s) | 15, 130, 805, 946, 1792, 2587, 3044 |
| SfcI | CTRYAG | 5 cut(s) | 1497, 1671, 1677, 2650, 3284 |
| Sfr274I | CTCGAG | 1 cut(s) | 2817 |
| SinI | GGWCC | 4 cut(s) | 443, 1059, 2103, 2465 |
| SlaI | CTCGAG | 1 cut(s) | 2817 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 84, 942, 1715, 2840, 3369 |
| SmlI | CTYRAG | 3 cut(s) | 1302, 2405, 2817 |
| SmoI | CTYRAG | 3 cut(s) | 1302, 2405, 2817 |
| SpeI | ACTAGT | 1 cut(s) | 1244 |
| SsiI | CCGC | 4 cut(s) | 90, 414, 2392, 3565 |
| SspI | AATATT | 5 cut(s) | 454, 538, 705, 1867, 2159 |
| SspMI | CTAG | 6 cut(s) | 105, 1245, 2112, 2793, 3195, 3297 |
| SstI | GAGCTC | 1 cut(s) | 867 |
| StyI | CCWWGG | 3 cut(s) | 760, 2835, 3488 |
| TaiI | ACGT | 6 cut(s) | 565, 741, 1461, 1623, 1740, 3138 |
| TaqI | TCGA | 9 cut(s) | 99, 842, 1428, 2067, 2178, 2311, 2818, 3339, 3345 |
| TatI | WGTACW | 2 cut(s) | 206, 2422 |
| TauI | GCSGC | 2 cut(s) | 93, 2394 |
| TfiI | GAWTC | 9 cut(s) | 71, 1035, 2207, 2371, 2900, 2933, 3044, 3326, 3537 |
| TscAI | CASTG | 9 cut(s) | 979, 1072, 2017, 2131, 2497, 2625, 2769, 2836, 2931 |
| TseFI | GTSAC | 4 cut(s) | 946, 970, 2845, 2926 |
| TseI | GCWGC | 7 cut(s) | 339, 1379, 1673, 2144, 2378, 3286, 3312 |
| Tsp45I | GTSAC | 4 cut(s) | 946, 970, 2845, 2926 |
| TspGWI | ACGGA | 5 cut(s) | 152, 1020, 1522, 2563, 2714 |
| TspRI | CASTG | 9 cut(s) | 979, 1072, 2017, 2131, 2497, 2625, 2769, 2836, 2931 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2306 |
| Vha464I | CTTAAG | 1 cut(s) | 2405 |
| VpaK11BI | GGWCC | 4 cut(s) | 443, 1059, 2103, 2465 |
| VspI | ATTAAT | 1 cut(s) | 360 |
| XapI | RAATTY | 5 cut(s) | 1463, 1604, 1751, 2056, 2568 |
| XbaI | TCTAGA | 1 cut(s) | 2792 |
| XceI | RCATGY | 3 cut(s) | 947, 3374, 3394 |
| XhoI | CTCGAG | 1 cut(s) | 2817 |
| XmiI | GTMKAC | 2 cut(s) | 750, 2067 |
| XmnI | GAANNNNTTC | 2 cut(s) | 312, 1755 |
| XspI | CTAG | 6 cut(s) | 105, 1245, 2112, 2793, 3195, 3297 |
| ZraI | GACGTC | 1 cut(s) | 739 |
| ZrmI | AGTACT | 2 cut(s) | 208, 2424 |