Nodal modulator
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G62360 AT3G62360 |
| fragaria_vesca | FvH4_1g27060 |
| malus_domestica | MD09G1284300.v1.1 MD17G1277500.v1.1 |
| prunus_persica | Prupe.3G010500_v2.0.a1 Prupe.3G010500_v2.0.a1 Prupe.3G010500_v2.0.a1 |
| pyrus_communis | pycom17g27510 |
| rosa_chinensis | RchiOBHm_Chr3g0487381 |
| rosa_laevigata | RLG00000023009 |
| rosa_multiflora | Rmu_sc0001955.1_g000004 |
| rosa_roxburghii | Rroxscaffold_6G00394840 |
| rosa_rugosa | Rorug03G0233600 |
| rosa_samantha | Rh3AG281600 Rh3BG317200 Rh3CG315300 Rh3DG313200 |
| rosa_wichuraiana | Rw3G024930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 284 |
| AatII | GACGTC | 1 cut(s) | 522 |
| Acc36I | ACCTGC | 1 cut(s) | 1292 |
| Acc65I | GGTACC | 2 cut(s) | 1831, 2301 |
| AccB1I | GGYRCC | 3 cut(s) | 1831, 2301, 3214 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 1896, 2090, 3317 |
| AccI | GTMKAC | 2 cut(s) | 531, 3085 |
| AccIII | TCCGGA | 1 cut(s) | 2726 |
| AciI | CCGC | 3 cut(s) | 195, 1865, 3017 |
| AclWI | GGATC | 3 cut(s) | 1985, 1998, 3195 |
| AcoI | YGGCCR | 3 cut(s) | 829, 2350, 2647 |
| AcsI | RAATTY | 6 cut(s) | 394, 1111, 1388, 1535, 1840, 2355 |
| AcuI | CTGAAG | 2 cut(s) | 2163, 2388 |
| AcvI | CACGTG | 1 cut(s) | 727 |
| AcyI | GRCGYC | 1 cut(s) | 519 |
| AdeI | CACNNNGTG | 1 cut(s) | 1136 |
| AfaI | GTAC | 6 cut(s) | 627, 1833, 2211, 2303, 3290, 3348 |
| AfeI | AGCGCT | 1 cut(s) | 2806 |
| AflII | CTTAAG | 1 cut(s) | 2192 |
| AflIII | ACRYGT | 2 cut(s) | 306, 724 |
| AhlI | ACTAGT | 2 cut(s) | 2206, 2962 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 932, 964 |
| Alw21I | GWGCWC | 2 cut(s) | 648, 1718 |
| Alw26I | GTCTC | 3 cut(s) | 1880, 2000, 2131 |
| AlwI | GGATC | 3 cut(s) | 1985, 1998, 3195 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 710, 2456, 2717 |
| Ama87I | CYCGRG | 2 cut(s) | 1986, 2604 |
| Aor13HI | TCCGGA | 1 cut(s) | 2726 |
| Aor51HI | AGCGCT | 1 cut(s) | 2806 |
| ApeKI | GCWGC | 6 cut(s) | 120, 204, 1160, 2459, 3070, 3096 |
| ApoI | RAATTY | 6 cut(s) | 394, 1111, 1388, 1535, 1840, 2355 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 208, 240, 416, 448, 1351, 1383 |
| AseI | ATTAAT | 1 cut(s) | 1620 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1539, 2835 |
| Asp718I | GGTACC | 2 cut(s) | 1831, 2301 |
| AspLEI | GCGC | 1 cut(s) | 2807 |
| AspS9I | GGNCC | 9 cut(s) | 62, 224, 772, 840, 1064, 1953, 2252, 2321, 3161 |
| AsuII | TTCGAA | 1 cut(s) | 1398 |
| AvaI | CYCGRG | 2 cut(s) | 1986, 2604 |
| AvaII | GGWCC | 3 cut(s) | 224, 840, 2252 |
| BalI | TGGCCA | 3 cut(s) | 831, 2352, 2649 |
| BamHI | GGATCC | 1 cut(s) | 1990 |
| BanI | GGYRCC | 3 cut(s) | 1831, 2301, 3214 |
| BanII | GRGCYC | 2 cut(s) | 648, 1718 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3272, 3304 |
| BauI | CACGAG | 1 cut(s) | 1696 |
| BbrPI | CACGTG | 1 cut(s) | 727 |
| BbsI | GAAGAC | 3 cut(s) | 1896, 2998, 3377 |
| Bbv12I | GWGCWC | 2 cut(s) | 648, 1718 |
| BbvI | GCAGC | 6 cut(s) | 107, 191, 1172, 2471, 3082, 3108 |
| BceAI | ACGGC | 3 cut(s) | 173, 1908, 1913 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3128, 3162 |
| BciVI | GTATCC | 1 cut(s) | 601 |
| BclI | TGATCA | 2 cut(s) | 598, 1918 |
| BcoDI | GTCTC | 3 cut(s) | 1880, 2000, 2131 |
| BcuI | ACTAGT | 2 cut(s) | 2206, 2962 |
| BfaI | CTAG | 5 cut(s) | 2031, 2207, 2639, 2963, 2979 |
| BfmI | CTRYAG | 3 cut(s) | 2437, 2457, 3068 |
| BfoI | RGCGCY | 1 cut(s) | 2808 |
| BfrI | CTTAAG | 1 cut(s) | 2192 |
| BfuAI | ACCTGC | 1 cut(s) | 1292 |
| BfuI | GTATCC | 1 cut(s) | 601 |
| BglII | AGATCT | 2 cut(s) | 2016, 2560 |
| BisI | GCNGC | 6 cut(s) | 121, 205, 1161, 2460, 3071, 3097 |
| BlsI | GCNGC | 6 cut(s) | 122, 206, 1162, 2461, 3072, 3098 |
| BmcAI | AGTACT | 1 cut(s) | 2211 |
| Bme18I | GGWCC | 3 cut(s) | 224, 840, 2252 |
| BmeT110I | CYCGRG | 2 cut(s) | 1986, 2604 |
| BmgT120I | GGNCC | 9 cut(s) | 62, 224, 772, 840, 1064, 1953, 2252, 2321, 3161 |
| BmrI | ACTGGG | 2 cut(s) | 165, 1564 |
| BmsI | GCATC | 7 cut(s) | 727, 977, 1313, 1576, 2374, 2831, 2959 |
| BmuI | ACTGGG | 2 cut(s) | 165, 1564 |
| BpiI | GAAGAC | 3 cut(s) | 1896, 2998, 3377 |
| BpmI | CTGGAG | 1 cut(s) | 1689 |
| Bpu14I | TTCGAA | 1 cut(s) | 1398 |
| BpuEI | CTTGAG | 1 cut(s) | 1068 |
| Bsa29I | ATCGAT | 1 cut(s) | 2119 |
| BsaAI | YACGTR | 2 cut(s) | 344, 727 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2686 |
| BsaHI | GRCGYC | 1 cut(s) | 519 |
| BsaI | GGTCTC | 1 cut(s) | 1880 |
| BsaWI | WCCGGW | 1 cut(s) | 2726 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 483, 513 |
| Bse1I | ACTGG | 7 cut(s) | 160, 265, 760, 1559, 1908, 2556, 3218 |
| Bse3DI | GCAATG | 2 cut(s) | 130, 1745 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2686 |
| BseAI | TCCGGA | 1 cut(s) | 2726 |
| BseCI | ATCGAT | 1 cut(s) | 2119 |
| BseJI | GATNNNNATC | 1 cut(s) | 2686 |
| BseMI | GCAATG | 2 cut(s) | 130, 1745 |
| BseNI | ACTGG | 7 cut(s) | 160, 265, 760, 1559, 1908, 2556, 3218 |
| BseRI | GAGGAG | 2 cut(s) | 1369, 2532 |
| BseXI | GCAGC | 6 cut(s) | 107, 191, 1172, 2471, 3082, 3108 |
| BseYI | CCCAGC | 1 cut(s) | 1479 |
| BshNI | GGYRCC | 3 cut(s) | 1831, 2301, 3214 |
| BshVI | ATCGAT | 1 cut(s) | 2119 |
| BsiHKAI | GWGCWC | 2 cut(s) | 648, 1718 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1986, 2604 |
| BsiSI | CCGG | 3 cut(s) | 2546, 2727, 3212 |
| BslFI | GGGAC | 4 cut(s) | 422, 522, 2265, 2512 |
| BsmAI | GTCTC | 3 cut(s) | 1880, 2000, 2131 |
| BsmBI | CGTCTC | 1 cut(s) | 2000 |
| BsmFI | GGGAC | 4 cut(s) | 422, 522, 2265, 2512 |
| BsmI | GAATGC | 2 cut(s) | 1867, 2471 |
| Bso31I | GGTCTC | 1 cut(s) | 1880 |
| BsoBI | CYCGRG | 2 cut(s) | 1986, 2604 |
| Bsp119I | TTCGAA | 1 cut(s) | 1398 |
| Bsp1286I | GDGCHC | 2 cut(s) | 648, 1718 |
| Bsp13I | TCCGGA | 1 cut(s) | 2726 |
| BspACI | CCGC | 3 cut(s) | 195, 1865, 3017 |
| BspDI | ATCGAT | 1 cut(s) | 2119 |
| BspEI | TCCGGA | 1 cut(s) | 2726 |
| BspMAI | CTGCAG | 2 cut(s) | 2461, 3072 |
| BspMI | ACCTGC | 1 cut(s) | 1292 |
| BspPI | GGATC | 3 cut(s) | 1985, 1998, 3195 |
| BspT104I | TTCGAA | 1 cut(s) | 1398 |
| BspT107I | GGYRCC | 3 cut(s) | 1831, 2301, 3214 |
| BspTI | CTTAAG | 1 cut(s) | 2192 |
| BspTNI | GGTCTC | 1 cut(s) | 1880 |
| BsrDI | GCAATG | 2 cut(s) | 130, 1745 |
| BsrI | ACTGG | 7 cut(s) | 160, 265, 760, 1559, 1908, 2556, 3218 |
| BssNI | GRCGYC | 1 cut(s) | 519 |
| BssSI | CACGAG | 1 cut(s) | 1696 |
| BssT1I | CCWWGG | 3 cut(s) | 541, 3051, 3272 |
| Bst2BI | CACGAG | 1 cut(s) | 1696 |
| Bst6I | CTCTTC | 3 cut(s) | 1344, 3018, 3177 |
| BstACI | GRCGYC | 1 cut(s) | 519 |
| BstAFI | CTTAAG | 1 cut(s) | 2192 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3067 |
| BstBAI | YACGTR | 2 cut(s) | 344, 727 |
| BstBI | TTCGAA | 1 cut(s) | 1398 |
| BstC8I | GCNNGC | 2 cut(s) | 2820, 3152 |
| BstDSI | CCRYGG | 2 cut(s) | 1890, 3297 |
| BstH2I | RGCGCY | 1 cut(s) | 2808 |
| BstHHI | GCGC | 1 cut(s) | 2807 |
| BstMAI | GTCTC | 3 cut(s) | 1880, 2000, 2131 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 126, 201, 905, 1049, 1160, 2468, 2618, 3067, 3260 |
| BstNSI | RCATGY | 3 cut(s) | 310, 3154, 3158 |
| BstSFI | CTRYAG | 3 cut(s) | 2437, 2457, 3068 |
| BstV1I | GCAGC | 6 cut(s) | 107, 191, 1172, 2471, 3082, 3108 |
| BstV2I | GAAGAC | 3 cut(s) | 1896, 2998, 3377 |
| BstX2I | RGATCY | 3 cut(s) | 1990, 2016, 2560 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 72, 548, 755, 1501 |
| BstYI | RGATCY | 3 cut(s) | 1990, 2016, 2560 |
| Bsu15I | ATCGAT | 1 cut(s) | 2119 |
| BsuI | GTATCC | 1 cut(s) | 601 |
| BsuTUI | ATCGAT | 1 cut(s) | 2119 |
| BtgI | CCRYGG | 2 cut(s) | 1890, 3297 |
| BtsI | GCAGTG | 1 cut(s) | 136 |
| BtsIMutI | CAGTG | 9 cut(s) | 136, 753, 846, 1915, 2412, 2549, 2623, 2718, 3252 |
| BveI | ACCTGC | 1 cut(s) | 1292 |
| Cac8I | GCNNGC | 2 cut(s) | 2820, 3152 |
| CaiI | CAGNNNCTG | 3 cut(s) | 710, 2456, 2717 |
| CfoI | GCGC | 1 cut(s) | 2807 |
| Cfr13I | GGNCC | 9 cut(s) | 62, 224, 772, 840, 1064, 1953, 2252, 2321, 3161 |
| ClaI | ATCGAT | 1 cut(s) | 2119 |
| CseI | GACGC | 1 cut(s) | 2768 |
| CsiI | ACCWGGT | 2 cut(s) | 876, 1132 |
| Csp6I | GTAC | 6 cut(s) | 626, 1832, 2210, 2302, 3289, 3347 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 1252, 1287, 1444, 1479 |
| CviQI | GTAC | 6 cut(s) | 626, 1832, 2210, 2302, 3289, 3347 |
| DraI | TTTAAA | 4 cut(s) | 619, 1740, 2310, 3109 |
| DraIII | CACNNNGTG | 1 cut(s) | 1136 |
| EaeI | YGGCCR | 3 cut(s) | 829, 2350, 2647 |
| Eam1104I | CTCTTC | 3 cut(s) | 1344, 3018, 3177 |
| EarI | CTCTTC | 3 cut(s) | 1344, 3018, 3177 |
| EciI | GGCGGA | 1 cut(s) | 210 |
| Ecl136II | GAGCTC | 2 cut(s) | 646, 1716 |
| Eco130I | CCWWGG | 3 cut(s) | 541, 3051, 3272 |
| Eco24I | GRGCYC | 2 cut(s) | 648, 1718 |
| Eco31I | GGTCTC | 1 cut(s) | 1880 |
| Eco32I | GATATC | 1 cut(s) | 2863 |
| Eco47I | GGWCC | 3 cut(s) | 224, 840, 2252 |
| Eco47III | AGCGCT | 1 cut(s) | 2806 |
| Eco53kI | GAGCTC | 2 cut(s) | 646, 1716 |
| Eco57I | CTGAAG | 2 cut(s) | 2163, 2388 |
| Eco72I | CACGTG | 1 cut(s) | 727 |
| Eco88I | CYCGRG | 2 cut(s) | 1986, 2604 |
| EcoICRI | GAGCTC | 2 cut(s) | 646, 1716 |
| EcoO109I | RGGNCCY | 2 cut(s) | 224, 2252 |
| EcoRV | GATATC | 1 cut(s) | 2863 |
| EcoT14I | CCWWGG | 3 cut(s) | 541, 3051, 3272 |
| EcoT22I | ATGCAT | 2 cut(s) | 3156, 3178 |
| EcoT38I | GRGCYC | 2 cut(s) | 648, 1718 |
| ErhI | CCWWGG | 3 cut(s) | 541, 3051, 3272 |
| Esp3I | CGTCTC | 1 cut(s) | 2000 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 231, 263 |
| FaqI | GGGAC | 4 cut(s) | 422, 522, 2265, 2512 |
| FauI | CCCGC | 1 cut(s) | 1858 |
| FauNDI | CATATG | 2 cut(s) | 640, 1020 |
| FbaI | TGATCA | 2 cut(s) | 598, 1918 |
| FblI | GTMKAC | 2 cut(s) | 531, 3085 |
| Fnu4HI | GCNGC | 6 cut(s) | 121, 205, 1161, 2460, 3071, 3097 |
| FriOI | GRGCYC | 2 cut(s) | 648, 1718 |
| Fsp4HI | GCNGC | 6 cut(s) | 121, 205, 1161, 2460, 3071, 3097 |
| FspBI | CTAG | 5 cut(s) | 2031, 2207, 2639, 2963, 2979 |
| GlaI | GCGC | 1 cut(s) | 2806 |
| GluI | GCNGC | 6 cut(s) | 121, 205, 1161, 2460, 3071, 3097 |
| GsaI | CCCAGC | 1 cut(s) | 1483 |
| GsuI | CTGGAG | 1 cut(s) | 1689 |
| HaeII | RGCGCY | 1 cut(s) | 2808 |
| HapII | CCGG | 3 cut(s) | 2546, 2727, 3212 |
| HgaI | GACGC | 1 cut(s) | 2768 |
| HhaI | GCGC | 1 cut(s) | 2807 |
| Hin1I | GRCGYC | 1 cut(s) | 519 |
| Hin6I | GCGC | 1 cut(s) | 2805 |
| HinP1I | GCGC | 1 cut(s) | 2805 |
| HincII | GTYRAC | 3 cut(s) | 109, 1693, 3207 |
| HindII | GTYRAC | 3 cut(s) | 109, 1693, 3207 |
| HindIII | AAGCTT | 2 cut(s) | 2070, 2345 |
| HpaII | CCGG | 3 cut(s) | 2546, 2727, 3212 |
| Hpy188III | TCNNGA | 6 cut(s) | 549, 561, 1711, 1988, 2727, 2756 |
| HpyCH4IV | ACGT | 7 cut(s) | 343, 414, 498, 519, 726, 1239, 1342 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 126, 201, 905, 1049, 1160, 2468, 2618, 3067, 3260 |
| HpySE526I | ACGT | 7 cut(s) | 343, 414, 498, 519, 726, 1239, 1342 |
| Hsp92I | GRCGYC | 1 cut(s) | 519 |
| HspAI | GCGC | 1 cut(s) | 2805 |
| Kpn2I | TCCGGA | 1 cut(s) | 2726 |
| KpnI | GGTACC | 2 cut(s) | 1835, 2305 |
| Ksp22I | TGATCA | 2 cut(s) | 598, 1918 |
| LmnI | GCTCC | 6 cut(s) | 185, 201, 212, 916, 1713, 2468 |
| Lsp1109I | GCAGC | 6 cut(s) | 107, 191, 1172, 2471, 3082, 3108 |
| LweI | GCATC | 7 cut(s) | 727, 977, 1313, 1576, 2374, 2831, 2959 |
| MabI | ACCWGGT | 2 cut(s) | 876, 1132 |
| MaeI | CTAG | 5 cut(s) | 2031, 2207, 2639, 2963, 2979 |
| MaeII | ACGT | 7 cut(s) | 343, 414, 498, 519, 726, 1239, 1342 |
| MfeI | CAATTG | 2 cut(s) | 900, 1722 |
| MflI | RGATCY | 3 cut(s) | 1990, 2016, 2560 |
| MhlI | GDGCHC | 2 cut(s) | 648, 1718 |
| MlsI | TGGCCA | 3 cut(s) | 831, 2352, 2649 |
| MluNI | TGGCCA | 3 cut(s) | 831, 2352, 2649 |
| MlyI | GAGTC | 5 cut(s) | 1051, 1591, 2585, 3008, 3202 |
| MmeI | TCCRAC | 1 cut(s) | 3048 |
| Mox20I | TGGCCA | 3 cut(s) | 831, 2352, 2649 |
| Mph1103I | ATGCAT | 2 cut(s) | 3156, 3178 |
| MroI | TCCGGA | 1 cut(s) | 2726 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1539, 2835 |
| MscI | TGGCCA | 3 cut(s) | 831, 2352, 2649 |
| MslI | CAYNNNNRTG | 2 cut(s) | 513, 1499 |
| Msp20I | TGGCCA | 3 cut(s) | 831, 2352, 2649 |
| MspA1I | CMGCKG | 2 cut(s) | 1460, 2462 |
| MspCI | CTTAAG | 1 cut(s) | 2192 |
| MspI | CCGG | 3 cut(s) | 2546, 2727, 3212 |
| MunI | CAATTG | 2 cut(s) | 900, 1722 |
| Mva1269I | GAATGC | 2 cut(s) | 1867, 2471 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 126, 201, 905, 1049, 1160, 2468, 2618, 3067, 3260 |
| NdeI | CATATG | 2 cut(s) | 640, 1020 |
| NmeAIII | GCCGAG | 1 cut(s) | 800 |
| NmuCI | GTSAC | 3 cut(s) | 727, 751, 2713 |
| NsiI | ATGCAT | 2 cut(s) | 3156, 3178 |
| NspI | RCATGY | 3 cut(s) | 310, 3154, 3158 |
| NspV | TTCGAA | 1 cut(s) | 1398 |
| PaeI | GCATGC | 1 cut(s) | 3154 |
| PaeR7I | CTCGAG | 1 cut(s) | 2604 |
| PasI | CCCWGGG | 2 cut(s) | 440, 1412 |
| PciI | ACATGT | 1 cut(s) | 306 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 411 |
| PctI | GAATGC | 2 cut(s) | 1867, 2471 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1539, 2835 |
| PfeI | GAWTC | 5 cut(s) | 113, 2158, 2687, 2720, 3321 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 1896, 2090, 3317 |
| PfoI | TCCNGGA | 2 cut(s) | 325, 1666 |
| PkrI | GCNGC | 6 cut(s) | 122, 206, 1162, 2461, 3072, 3098 |
| PleI | GAGTC | 5 cut(s) | 1051, 1591, 2584, 3007, 3202 |
| PmaCI | CACGTG | 1 cut(s) | 727 |
| PmlI | CACGTG | 1 cut(s) | 727 |
| PpsI | GAGTC | 5 cut(s) | 1051, 1591, 2584, 3007, 3202 |
| Ppu21I | YACGTR | 2 cut(s) | 344, 727 |
| PpuMI | RGGWCCY | 2 cut(s) | 224, 2252 |
| PscI | ACATGT | 1 cut(s) | 306 |
| PshBI | ATTAAT | 1 cut(s) | 1620 |
| PsiI | TTATAA | 1 cut(s) | 284 |
| Psp124BI | GAGCTC | 2 cut(s) | 648, 1718 |
| Psp5II | RGGWCCY | 2 cut(s) | 224, 2252 |
| PspCI | CACGTG | 1 cut(s) | 727 |
| PspFI | CCCAGC | 1 cut(s) | 1479 |
| PspPI | GGNCC | 9 cut(s) | 62, 224, 772, 840, 1064, 1953, 2252, 2321, 3161 |
| PspPPI | RGGWCCY | 2 cut(s) | 224, 2252 |
| PspXI | VCTCGAGB | 1 cut(s) | 2604 |
| PstI | CTGCAG | 2 cut(s) | 2461, 3072 |
| PstNI | CAGNNNCTG | 3 cut(s) | 710, 2456, 2717 |
| PsuI | RGATCY | 3 cut(s) | 1990, 2016, 2560 |
| PvuII | CAGCTG | 2 cut(s) | 1460, 2462 |
| RsaI | GTAC | 6 cut(s) | 627, 1833, 2211, 2303, 3290, 3348 |
| RsaNI | GTAC | 6 cut(s) | 626, 1832, 2210, 2302, 3289, 3347 |
| RseI | CAYNNNNRTG | 2 cut(s) | 513, 1499 |
| SacI | GAGCTC | 2 cut(s) | 648, 1718 |
| SatI | GCNGC | 6 cut(s) | 121, 205, 1161, 2460, 3071, 3097 |
| Sau96I | GGNCC | 9 cut(s) | 62, 224, 772, 840, 1064, 1953, 2252, 2321, 3161 |
| ScaI | AGTACT | 1 cut(s) | 2211 |
| SchI | GAGTC | 5 cut(s) | 1051, 1591, 2585, 3008, 3202 |
| SduI | GDGCHC | 2 cut(s) | 648, 1718 |
| SexAI | ACCWGGT | 2 cut(s) | 876, 1132 |
| SfaNI | GCATC | 7 cut(s) | 727, 977, 1313, 1576, 2374, 2831, 2959 |
| SfcI | CTRYAG | 3 cut(s) | 2437, 2457, 3068 |
| Sfr274I | CTCGAG | 1 cut(s) | 2604 |
| SfuI | TTCGAA | 1 cut(s) | 1398 |
| SinI | GGWCC | 3 cut(s) | 224, 840, 2252 |
| SlaI | CTCGAG | 1 cut(s) | 2604 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 513, 1499 |
| SmlI | CTYRAG | 3 cut(s) | 1083, 2192, 2604 |
| SmoI | CTYRAG | 3 cut(s) | 1083, 2192, 2604 |
| SpeI | ACTAGT | 2 cut(s) | 2206, 2962 |
| SphI | GCATGC | 1 cut(s) | 3154 |
| SsiI | CCGC | 3 cut(s) | 195, 1865, 3017 |
| SspI | AATATT | 6 cut(s) | 235, 319, 486, 1651, 1943, 2368 |
| SspMI | CTAG | 5 cut(s) | 2031, 2207, 2639, 2963, 2979 |
| SstI | GAGCTC | 2 cut(s) | 648, 1718 |
| StyI | CCWWGG | 3 cut(s) | 541, 3051, 3272 |
| TaiI | ACGT | 7 cut(s) | 346, 417, 501, 522, 729, 1242, 1345 |
| TaqI | TCGA | 6 cut(s) | 681, 1398, 2119, 2605, 2690, 3123 |
| TatI | WGTACW | 1 cut(s) | 2209 |
| TfiI | GAWTC | 5 cut(s) | 113, 2158, 2687, 2720, 3321 |
| TscAI | CASTG | 9 cut(s) | 136, 760, 853, 1915, 2412, 2556, 2623, 2718, 3252 |
| TseFI | GTSAC | 3 cut(s) | 727, 751, 2713 |
| TseI | GCWGC | 6 cut(s) | 120, 204, 1160, 2459, 3070, 3096 |
| Tsp45I | GTSAC | 3 cut(s) | 727, 751, 2713 |
| TspGWI | ACGGA | 3 cut(s) | 199, 2501, 2992 |
| TspRI | CASTG | 9 cut(s) | 136, 760, 853, 1915, 2412, 2556, 2623, 2718, 3252 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 1896, 2090, 3317 |
| Vha464I | CTTAAG | 1 cut(s) | 2192 |
| VpaK11BI | GGWCC | 3 cut(s) | 224, 840, 2252 |
| VspI | ATTAAT | 1 cut(s) | 1620 |
| XapI | RAATTY | 6 cut(s) | 394, 1111, 1388, 1535, 1840, 2355 |
| XceI | RCATGY | 3 cut(s) | 310, 3154, 3158 |
| XhoI | CTCGAG | 1 cut(s) | 2604 |
| XmiI | GTMKAC | 2 cut(s) | 531, 3085 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1539, 2835 |
| XspI | CTAG | 5 cut(s) | 2031, 2207, 2639, 2963, 2979 |
| ZraI | GACGTC | 1 cut(s) | 520 |
| ZrmI | AGTACT | 1 cut(s) | 2211 |
| Zsp2I | ATGCAT | 2 cut(s) | 3156, 3178 |