Nodal modulator
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G62360 AT3G62360 |
| fragaria_vesca | FvH4_1g27060 |
| malus_domestica | MD09G1284300.v1.1 MD17G1277500.v1.1 |
| prunus_persica | Prupe.3G010500_v2.0.a1 Prupe.3G010500_v2.0.a1 Prupe.3G010500_v2.0.a1 |
| pyrus_communis | pycom17g27510 |
| rosa_chinensis | RchiOBHm_Chr3g0487381 |
| rosa_laevigata | RLG00000023009 |
| rosa_multiflora | Rmu_sc0001955.1_g000004 |
| rosa_roxburghii | Rroxscaffold_6G00394840 |
| rosa_rugosa | Rorug03G0233600 |
| rosa_samantha | Rh3AG281600 Rh3BG317200 Rh3CG315300 Rh3DG313200 |
| rosa_wichuraiana | Rw3G024930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 2403 |
| AccB1I | GGYRCC | 2 cut(s) | 1342, 3433 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3536 |
| AccI | GTMKAC | 1 cut(s) | 1402 |
| AccII | CGCG | 2 cut(s) | 32, 2823 |
| AciI | CCGC | 7 cut(s) | 32, 54, 57, 84, 1224, 1229, 1298 |
| AclWI | GGATC | 6 cut(s) | 2204, 2217, 2290, 2344, 3221, 3414 |
| AcoI | YGGCCR | 2 cut(s) | 2566, 2863 |
| AcyI | GRCGYC | 2 cut(s) | 1184, 2601 |
| AfaI | GTAC | 6 cut(s) | 205, 769, 1492, 1890, 1991, 3596 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 307, 704, 2876, 3259, 3418, 3536 |
| AflII | CTTAAG | 1 cut(s) | 2408 |
| AflIII | ACRYGT | 2 cut(s) | 940, 3373 |
| AhlI | ACTAGT | 1 cut(s) | 1474 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 686, 718 |
| Alw21I | GWGCWC | 3 cut(s) | 107, 215, 1934 |
| Alw26I | GTCTC | 2 cut(s) | 2349, 3466 |
| AlwI | GGATC | 6 cut(s) | 2204, 2217, 2290, 2344, 3221, 3414 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 776, 926, 2933 |
| Ama87I | CYCGRG | 2 cut(s) | 1662, 2205 |
| ApaI | GGGCCC | 1 cut(s) | 2541 |
| ApeKI | GCWGC | 5 cut(s) | 336, 1376, 2381, 2801, 3315 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 632, 664, 1169, 1201 |
| AseI | ATTAAT | 1 cut(s) | 357 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3248 |
| AspLEI | GCGC | 1 cut(s) | 2404 |
| AsuC2I | CCSGG | 1 cut(s) | 2788 |
| AsuHPI | GGTGA | 9 cut(s) | 491, 619, 897, 1364, 1374, 3033, 3268, 3401, 3478 |
| AsuII | TTCGAA | 1 cut(s) | 3242 |
| AvaI | CYCGRG | 2 cut(s) | 1662, 2205 |
| AvaII | GGWCC | 4 cut(s) | 278, 298, 1280, 1774 |
| BaeGI | GKGCMC | 2 cut(s) | 427, 2541 |
| BalI | TGGCCA | 1 cut(s) | 2568 |
| BamHI | GGATCC | 1 cut(s) | 2209 |
| BanI | GGYRCC | 2 cut(s) | 1342, 3433 |
| BanII | GRGCYC | 4 cut(s) | 107, 1934, 2541, 2613 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1881, 1913 |
| BbsI | GAAGAC | 3 cut(s) | 19, 3217, 3296 |
| Bbv12I | GWGCWC | 3 cut(s) | 107, 215, 1934 |
| BbvI | GCAGC | 5 cut(s) | 323, 1388, 2368, 2813, 3327 |
| BceAI | ACGGC | 1 cut(s) | 788 |
| BclI | TGATCA | 2 cut(s) | 114, 325 |
| BcnI | CCSGG | 1 cut(s) | 2788 |
| BcoDI | GTCTC | 2 cut(s) | 2349, 3466 |
| BcuI | ACTAGT | 1 cut(s) | 1474 |
| BfaI | CTAG | 5 cut(s) | 1475, 3198, 3210, 3300, 3312 |
| BfmI | CTRYAG | 4 cut(s) | 1188, 1494, 2577, 2653 |
| BfrI | CTTAAG | 1 cut(s) | 2408 |
| BisI | GCNGC | 6 cut(s) | 57, 337, 1377, 2382, 2802, 3316 |
| BlpI | GCTNAGC | 1 cut(s) | 1933 |
| BlsI | GCNGC | 6 cut(s) | 58, 338, 1378, 2383, 2803, 3317 |
| BmcAI | AGTACT | 1 cut(s) | 205 |
| Bme18I | GGWCC | 4 cut(s) | 278, 298, 1280, 1774 |
| BmeT110I | CYCGRG | 2 cut(s) | 1662, 2205 |
| BmrI | ACTGGG | 3 cut(s) | 381, 2091, 2136 |
| BmsI | GCATC | 8 cut(s) | 127, 802, 943, 1792, 2027, 3047, 3181, 3289 |
| BmuI | ACTGGG | 3 cut(s) | 381, 2091, 2136 |
| BpiI | GAAGAC | 3 cut(s) | 19, 3217, 3296 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 89, 121, 2676, 2708 |
| BpmI | CTGGAG | 3 cut(s) | 1905, 2694, 2745 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1933 |
| Bpu14I | TTCGAA | 1 cut(s) | 3242 |
| BpuMI | CCSGG | 1 cut(s) | 2788 |
| Bsa29I | ATCGAT | 1 cut(s) | 1425 |
| BsaAI | YACGTR | 1 cut(s) | 560 |
| BsaBI | GATNNNNATC | 3 cut(s) | 269, 2902, 3507 |
| BsaHI | GRCGYC | 2 cut(s) | 1184, 2601 |
| BsaJI | CCNNGG | 8 cut(s) | 76, 757, 1627, 2204, 2787, 2838, 3270, 3491 |
| BsaWI | WCCGGW | 1 cut(s) | 3294 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 699, 729, 978, 1008, 3450, 3480 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 307, 704, 2876, 3259, 3418, 3536 |
| Bse1I | ACTGG | 9 cut(s) | 337, 376, 976, 1354, 2086, 2131, 3056, 3183, 3437 |
| Bse3DI | GCAATG | 2 cut(s) | 346, 2397 |
| Bse8I | GATNNNNATC | 3 cut(s) | 269, 2902, 3507 |
| BseCI | ATCGAT | 1 cut(s) | 1425 |
| BseDI | CCNNGG | 8 cut(s) | 76, 757, 1627, 2204, 2787, 2838, 3270, 3491 |
| BseJI | GATNNNNATC | 3 cut(s) | 269, 2902, 3507 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 307, 704, 2876, 3259, 3418, 3536 |
| BseMI | GCAATG | 2 cut(s) | 346, 2397 |
| BseMII | CTCAG | 8 cut(s) | 221, 459, 701, 741, 1377, 1481, 1947, 2043 |
| BseNI | ACTGG | 9 cut(s) | 337, 376, 976, 1354, 2086, 2131, 3056, 3183, 3437 |
| BseSI | GKGCMC | 2 cut(s) | 427, 2541 |
| BseXI | GCAGC | 5 cut(s) | 323, 1388, 2368, 2813, 3327 |
| BseYI | CCCAGC | 2 cut(s) | 1695, 2384 |
| BsgI | GTGCAG | 1 cut(s) | 1253 |
| Bsh1236I | CGCG | 2 cut(s) | 32, 2823 |
| BshNI | GGYRCC | 2 cut(s) | 1342, 3433 |
| BshVI | ATCGAT | 1 cut(s) | 1425 |
| BsiHKAI | GWGCWC | 3 cut(s) | 107, 215, 1934 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1662, 2205 |
| BsiSI | CCGG | 4 cut(s) | 2787, 2862, 3295, 3431 |
| BslFI | GGGAC | 1 cut(s) | 738 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 307, 704, 2876, 3259, 3418, 3536 |
| BsmAI | GTCTC | 2 cut(s) | 2349, 3466 |
| BsmFI | GGGAC | 1 cut(s) | 738 |
| BsmI | GAATGC | 2 cut(s) | 2687, 3367 |
| BsoBI | CYCGRG | 2 cut(s) | 1662, 2205 |
| Bsp119I | TTCGAA | 1 cut(s) | 3242 |
| Bsp120I | GGGCCC | 1 cut(s) | 2537 |
| Bsp1286I | GDGCHC | 6 cut(s) | 107, 215, 427, 1934, 2541, 2613 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1933 |
| Bsp19I | CCATGG | 1 cut(s) | 2838 |
| BspACI | CCGC | 7 cut(s) | 32, 54, 57, 84, 1224, 1229, 1298 |
| BspCNI | CTCAG | 8 cut(s) | 220, 458, 700, 740, 1378, 1480, 1946, 2044 |
| BspDI | ATCGAT | 1 cut(s) | 1425 |
| BspFNI | CGCG | 2 cut(s) | 32, 2823 |
| BspHI | TCATGA | 1 cut(s) | 1048 |
| BspPI | GGATC | 6 cut(s) | 2204, 2217, 2290, 2344, 3221, 3414 |
| BspQI | GCTCTTC | 1 cut(s) | 112 |
| BspT104I | TTCGAA | 1 cut(s) | 3242 |
| BspT107I | GGYRCC | 2 cut(s) | 1342, 3433 |
| BspTI | CTTAAG | 1 cut(s) | 2408 |
| BsrDI | GCAATG | 2 cut(s) | 346, 2397 |
| BsrI | ACTGG | 9 cut(s) | 337, 376, 976, 1354, 2086, 2131, 3056, 3183, 3437 |
| BssECI | CCNNGG | 8 cut(s) | 76, 757, 1627, 2204, 2787, 2838, 3270, 3491 |
| BssNI | GRCGYC | 2 cut(s) | 1184, 2601 |
| BssT1I | CCWWGG | 4 cut(s) | 757, 2838, 3270, 3491 |
| Bst6I | CTCTTC | 5 cut(s) | 26, 112, 1560, 3237, 3396 |
| BstACI | GRCGYC | 2 cut(s) | 1184, 2601 |
| BstAFI | CTTAAG | 1 cut(s) | 2408 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3286 |
| BstBAI | YACGTR | 1 cut(s) | 560 |
| BstBI | TTCGAA | 1 cut(s) | 3242 |
| BstC8I | GCNNGC | 3 cut(s) | 103, 1501, 2139 |
| BstDEI | CTNAG | 9 cut(s) | 207, 445, 687, 727, 739, 1386, 1467, 1933, 2052 |
| BstDSI | CCRYGG | 2 cut(s) | 76, 2838 |
| BstEII | GGTNACC | 1 cut(s) | 34 |
| BstFNI | CGCG | 2 cut(s) | 32, 2823 |
| BstHHI | GCGC | 1 cut(s) | 2404 |
| BstMAI | GTCTC | 2 cut(s) | 2349, 3466 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 62, 342, 1265, 1376, 2649, 2684, 2734, 2834, 3286 |
| BstNSI | RCATGY | 2 cut(s) | 944, 3377 |
| BstPI | GGTNACC | 1 cut(s) | 34 |
| BstSFI | CTRYAG | 4 cut(s) | 1188, 1494, 2577, 2653 |
| BstSLI | GKGCMC | 2 cut(s) | 427, 2541 |
| BstUI | CGCG | 2 cut(s) | 32, 2823 |
| BstV1I | GCAGC | 5 cut(s) | 323, 1388, 2368, 2813, 3327 |
| BstV2I | GAAGAC | 3 cut(s) | 19, 3217, 3296 |
| BstX2I | RGATCY | 1 cut(s) | 2209 |
| BstXI | CCANNNNNNTGG | 5 cut(s) | 288, 764, 971, 2446, 2845 |
| BstYI | RGATCY | 1 cut(s) | 2209 |
| Bsu15I | ATCGAT | 1 cut(s) | 1425 |
| BsuTUI | ATCGAT | 1 cut(s) | 1425 |
| BtgI | CCRYGG | 2 cut(s) | 76, 2838 |
| BtgZI | GCGATG | 1 cut(s) | 1947 |
| BtsI | GCAGTG | 1 cut(s) | 352 |
| Cac8I | GCNNGC | 3 cut(s) | 103, 1501, 2139 |
| CaiI | CAGNNNCTG | 3 cut(s) | 776, 926, 2933 |
| CciI | TCATGA | 1 cut(s) | 1048 |
| CfoI | GCGC | 1 cut(s) | 2404 |
| ClaI | ATCGAT | 1 cut(s) | 1425 |
| CseI | GACGC | 3 cut(s) | 1173, 2609, 2717 |
| CsiI | ACCWGGT | 1 cut(s) | 1092 |
| Csp6I | GTAC | 6 cut(s) | 204, 768, 1491, 1889, 1990, 3595 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2806, 2841 |
| CviQI | GTAC | 6 cut(s) | 204, 768, 1491, 1889, 1990, 3595 |
| DdeI | CTNAG | 9 cut(s) | 207, 445, 687, 727, 739, 1386, 1467, 1933, 2052 |
| DraI | TTTAAA | 1 cut(s) | 2526 |
| EaeI | YGGCCR | 2 cut(s) | 2566, 2863 |
| Eam1104I | CTCTTC | 5 cut(s) | 26, 112, 1560, 3237, 3396 |
| EarI | CTCTTC | 5 cut(s) | 26, 112, 1560, 3237, 3396 |
| Ecl136II | GAGCTC | 2 cut(s) | 105, 1932 |
| Eco130I | CCWWGG | 4 cut(s) | 757, 2838, 3270, 3491 |
| Eco24I | GRGCYC | 4 cut(s) | 107, 1934, 2541, 2613 |
| Eco32I | GATATC | 1 cut(s) | 3079 |
| Eco47I | GGWCC | 4 cut(s) | 278, 298, 1280, 1774 |
| Eco53kI | GAGCTC | 2 cut(s) | 105, 1932 |
| Eco88I | CYCGRG | 2 cut(s) | 1662, 2205 |
| Eco91I | GGTNACC | 1 cut(s) | 34 |
| EcoICRI | GAGCTC | 2 cut(s) | 105, 1932 |
| EcoO109I | RGGNCCY | 3 cut(s) | 440, 2468, 2538 |
| EcoO65I | GGTNACC | 1 cut(s) | 34 |
| EcoRI | GAATTC | 1 cut(s) | 2159 |
| EcoRV | GATATC | 1 cut(s) | 3079 |
| EcoT14I | CCWWGG | 4 cut(s) | 757, 2838, 3270, 3491 |
| EcoT38I | GRGCYC | 4 cut(s) | 107, 1934, 2541, 2613 |
| ErhI | CCWWGG | 4 cut(s) | 757, 2838, 3270, 3491 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 447, 479 |
| FaqI | GGGAC | 1 cut(s) | 738 |
| FbaI | TGATCA | 2 cut(s) | 114, 325 |
| FblI | GTMKAC | 1 cut(s) | 1402 |
| Fnu4HI | GCNGC | 6 cut(s) | 57, 337, 1377, 2382, 2802, 3316 |
| FriOI | GRGCYC | 4 cut(s) | 107, 1934, 2541, 2613 |
| Fsp4HI | GCNGC | 6 cut(s) | 57, 337, 1377, 2382, 2802, 3316 |
| FspBI | CTAG | 5 cut(s) | 1475, 3198, 3210, 3300, 3312 |
| FspI | TGCGCA | 1 cut(s) | 2403 |
| GlaI | GCGC | 1 cut(s) | 2403 |
| GluI | GCNGC | 6 cut(s) | 57, 337, 1377, 2382, 2802, 3316 |
| GsaI | CCCAGC | 2 cut(s) | 1699, 2388 |
| GsuI | CTGGAG | 3 cut(s) | 1905, 2694, 2745 |
| HapII | CCGG | 4 cut(s) | 2787, 2862, 3295, 3431 |
| HgaI | GACGC | 3 cut(s) | 1173, 2609, 2717 |
| HhaI | GCGC | 1 cut(s) | 2404 |
| Hin1I | GRCGYC | 2 cut(s) | 1184, 2601 |
| Hin6I | GCGC | 1 cut(s) | 2402 |
| HinP1I | GCGC | 1 cut(s) | 2402 |
| HincII | GTYRAC | 5 cut(s) | 184, 637, 1000, 1732, 1909 |
| HindII | GTYRAC | 5 cut(s) | 184, 637, 1000, 1732, 1909 |
| HindIII | AAGCTT | 4 cut(s) | 1085, 1705, 2510, 2561 |
| HpaII | CCGG | 4 cut(s) | 2787, 2862, 3295, 3431 |
| HphI | GGTGA | 9 cut(s) | 491, 619, 897, 1364, 1374, 3033, 3268, 3401, 3478 |
| Hpy166II | GTNNAC | 9 cut(s) | 184, 369, 637, 1000, 1151, 1403, 1732, 1909, 2068 |
| Hpy8I | GTNNAC | 9 cut(s) | 184, 369, 637, 1000, 1151, 1403, 1732, 1909, 2068 |
| Hpy99I | CGWCG | 3 cut(s) | 98, 1739, 2648 |
| HpyCH4IV | ACGT | 5 cut(s) | 559, 1620, 1737, 3393, 3593 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 62, 342, 1265, 1376, 2649, 2684, 2734, 2834, 3286 |
| HpyF3I | CTNAG | 9 cut(s) | 207, 445, 687, 727, 739, 1386, 1467, 1933, 2052 |
| HpySE526I | ACGT | 5 cut(s) | 559, 1620, 1737, 3393, 3593 |
| Hsp92I | GRCGYC | 2 cut(s) | 1184, 2601 |
| HspAI | GCGC | 1 cut(s) | 2402 |
| Ksp22I | TGATCA | 2 cut(s) | 114, 325 |
| LguI | GCTCTTC | 1 cut(s) | 112 |
| LmnI | GCTCC | 6 cut(s) | 401, 1132, 1929, 2675, 2684, 2789 |
| Lsp1109I | GCAGC | 5 cut(s) | 323, 1388, 2368, 2813, 3327 |
| LweI | GCATC | 8 cut(s) | 127, 802, 943, 1792, 2027, 3047, 3181, 3289 |
| MabI | ACCWGGT | 1 cut(s) | 1092 |
| MaeI | CTAG | 5 cut(s) | 1475, 3198, 3210, 3300, 3312 |
| MaeII | ACGT | 5 cut(s) | 559, 1620, 1737, 3393, 3593 |
| MflI | RGATCY | 1 cut(s) | 2209 |
| MhlI | GDGCHC | 6 cut(s) | 107, 215, 427, 1934, 2541, 2613 |
| MlsI | TGGCCA | 1 cut(s) | 2568 |
| MluNI | TGGCCA | 1 cut(s) | 2568 |
| MlyI | GAGTC | 7 cut(s) | 1267, 2801, 2930, 3041, 3227, 3421, 3468 |
| MmeI | TCCRAC | 1 cut(s) | 964 |
| Mox20I | TGGCCA | 1 cut(s) | 2568 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3248 |
| MscI | TGGCCA | 1 cut(s) | 2568 |
| MslI | CAYNNNNRTG | 7 cut(s) | 729, 939, 1425, 1821, 2444, 2843, 3372 |
| Msp20I | TGGCCA | 1 cut(s) | 2568 |
| MspA1I | CMGCKG | 1 cut(s) | 2111 |
| MspCI | CTTAAG | 1 cut(s) | 2408 |
| MspI | CCGG | 4 cut(s) | 2787, 2862, 3295, 3431 |
| Mva1269I | GAATGC | 2 cut(s) | 2687, 3367 |
| MvnI | CGCG | 2 cut(s) | 32, 2823 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 62, 342, 1265, 1376, 2649, 2684, 2734, 2834, 3286 |
| NciI | CCSGG | 1 cut(s) | 2788 |
| NcoI | CCATGG | 1 cut(s) | 2838 |
| NmuCI | GTSAC | 5 cut(s) | 943, 967, 1060, 2929, 3200 |
| NsbI | TGCGCA | 1 cut(s) | 2403 |
| NspI | RCATGY | 2 cut(s) | 944, 3377 |
| NspV | TTCGAA | 1 cut(s) | 3242 |
| PagI | TCATGA | 1 cut(s) | 1048 |
| PciI | ACATGT | 2 cut(s) | 940, 3373 |
| PciSI | GCTCTTC | 1 cut(s) | 112 |
| PctI | GAATGC | 2 cut(s) | 2687, 3367 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3248 |
| PfeI | GAWTC | 7 cut(s) | 68, 694, 975, 1667, 2903, 3329, 3540 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3536 |
| PfoI | TCCNGGA | 3 cut(s) | 541, 1882, 2710 |
| PkrI | GCNGC | 6 cut(s) | 58, 338, 1378, 2383, 2803, 3317 |
| PleI | GAGTC | 7 cut(s) | 1267, 2800, 2930, 3041, 3226, 3421, 3467 |
| PpsI | GAGTC | 7 cut(s) | 1267, 2800, 2930, 3041, 3226, 3421, 3467 |
| Ppu21I | YACGTR | 1 cut(s) | 560 |
| PscI | ACATGT | 2 cut(s) | 940, 3373 |
| PshBI | ATTAAT | 1 cut(s) | 357 |
| Psp124BI | GAGCTC | 2 cut(s) | 107, 1934 |
| PspEI | GGTNACC | 1 cut(s) | 34 |
| PspFI | CCCAGC | 2 cut(s) | 1695, 2384 |
| PspOMI | GGGCCC | 1 cut(s) | 2537 |
| PstNI | CAGNNNCTG | 3 cut(s) | 776, 926, 2933 |
| PsuI | RGATCY | 1 cut(s) | 2209 |
| PvuII | CAGCTG | 1 cut(s) | 2111 |
| RsaI | GTAC | 6 cut(s) | 205, 769, 1492, 1890, 1991, 3596 |
| RsaNI | GTAC | 6 cut(s) | 204, 768, 1491, 1889, 1990, 3595 |
| RseI | CAYNNNNRTG | 7 cut(s) | 729, 939, 1425, 1821, 2444, 2843, 3372 |
| SacI | GAGCTC | 2 cut(s) | 107, 1934 |
| SapI | GCTCTTC | 1 cut(s) | 112 |
| SatI | GCNGC | 6 cut(s) | 57, 337, 1377, 2382, 2802, 3316 |
| ScaI | AGTACT | 1 cut(s) | 205 |
| SchI | GAGTC | 7 cut(s) | 1267, 2801, 2930, 3041, 3227, 3421, 3468 |
| SduI | GDGCHC | 6 cut(s) | 107, 215, 427, 1934, 2541, 2613 |
| SexAI | ACCWGGT | 1 cut(s) | 1092 |
| SfaNI | GCATC | 8 cut(s) | 127, 802, 943, 1792, 2027, 3047, 3181, 3289 |
| SfcI | CTRYAG | 4 cut(s) | 1188, 1494, 2577, 2653 |
| SfuI | TTCGAA | 1 cut(s) | 3242 |
| SinI | GGWCC | 4 cut(s) | 278, 298, 1280, 1774 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 729, 939, 1425, 1821, 2444, 2843, 3372 |
| SmlI | CTYRAG | 1 cut(s) | 2408 |
| SmoI | CTYRAG | 1 cut(s) | 2408 |
| SpeI | ACTAGT | 1 cut(s) | 1474 |
| SsiI | CCGC | 7 cut(s) | 32, 54, 57, 84, 1224, 1229, 1298 |
| SspI | AATATT | 1 cut(s) | 535 |
| SspMI | CTAG | 5 cut(s) | 1475, 3198, 3210, 3300, 3312 |
| SstI | GAGCTC | 2 cut(s) | 107, 1934 |
| StyI | CCWWGG | 4 cut(s) | 757, 2838, 3270, 3491 |
| TaiI | ACGT | 5 cut(s) | 562, 1623, 1740, 3396, 3596 |
| TaqI | TCGA | 9 cut(s) | 96, 147, 1338, 1425, 2314, 2889, 3216, 3242, 3348 |
| TatI | WGTACW | 2 cut(s) | 203, 1888 |
| TauI | GCSGC | 1 cut(s) | 59 |
| TfiI | GAWTC | 7 cut(s) | 68, 694, 975, 1667, 2903, 3329, 3540 |
| TseFI | GTSAC | 5 cut(s) | 943, 967, 1060, 2929, 3200 |
| TseI | GCWGC | 5 cut(s) | 336, 1376, 2381, 2801, 3315 |
| Tsp45I | GTSAC | 5 cut(s) | 943, 967, 1060, 2929, 3200 |
| TspGWI | ACGGA | 7 cut(s) | 291, 370, 1017, 1338, 1434, 2611, 3211 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3536 |
| Vha464I | CTTAAG | 1 cut(s) | 2408 |
| VpaK11BI | GGWCC | 4 cut(s) | 278, 298, 1280, 1774 |
| VspI | ATTAAT | 1 cut(s) | 357 |
| XceI | RCATGY | 2 cut(s) | 944, 3377 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 83 |
| XmiI | GTMKAC | 1 cut(s) | 1402 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3248 |
| XspI | CTAG | 5 cut(s) | 1475, 3198, 3210, 3300, 3312 |
| ZrmI | AGTACT | 1 cut(s) | 205 |