Prupe.3G036000_v2.0.a1
MYB Family

Myb/SANT-like DNA-binding domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
2602129 .. 2603429
1301 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G036000.1

Sequence Viewer

Length: 1095 bp
ATGGAGGAGGATGACGAGATCCAATCACCGGCGTCGGGGCGAAGCGGATCGCCGGAGTCGCCGAGGCAGAACGGTCGGATAACGGTGACGGTGGCGGTGCCGTCGGCTCAGATTCCGGCGCCGGCGTCGCAGCCCCAGAGCAAGGGCTTGACGCTGGCTCTGCCGTCGCAGGGGCGGAGCAGCGGCGGAGGAAGGGAGGACTGCTGGAGCGAAGGAGCGACAGCGGTGCTGATCGAGGCGTGGGGGGAGAGGTACTTGGAGCTGAGCAGAGGGAATTTGAAGCAGAAGCACTGGAAGGAAGTGGCGGACGTCGTCAGCAGCAGAGAGGACTATGGTAAGACACCCAAGACTGATATTCAGTGTAAGAATAGGATCGATACTGTCAAGAAGAAGTATAAGCTTGAGAAATCGAAGATGGCAGCGGGCGGCGGACCCAGTAAATGGCCTTTTTTTGAGAGGCTCGATCATTTGATTGGGCCCTCCTCTGCTGCTAAGGTGGGTCCTGGCTCTGGTGGCGGTGGCGGGTTTTTGGCGCACAACCAGAAAGTGCCGATGGGAATGCCGGTCGGGGTTCGCCCTGGTCAGTATTTCGGGCAACGGGACTCGAAACGGGAGGTAAAGATTAGACCACGGAGTTTGGTGGATTGGGACTCGGATGAGTCCGGGGAGCTGTCGCCTTTTTCGATTGATAACGAGGTTTTCGAGCGGAAGAGGCGGAGGAGGACGGTGCTGCCGGAGGCGAATGTGAACAATGCTGGTGGCGTGGGAAAGGGAGGGGTTGGAACAAAAGATGGAGGGGTGGGTAGAGAGAAAGGAGGAGGAGGATGGGGGAGTTCAGTGAGGGAATTGACTCGGGCGATAATGAAATTTGGGGAGGCTTATGAGCATGCAGAGACAGCAAAGTTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAGTTTGCCAAGGAGCTGGAGCTGCAGAGAATGCAGTTCTTCATGAAGACCCAAGTGGAGATTTCTCAGCTTAAGCATGGAGGTGGGAGGAGGAGTGGGAATGGGAATGCTGGTAACCATCATAGCAACAACAATAACAGTGATTGTAGCAACTAG

Protein Analysis

365

Amino Acids

39.55

Weight (kDa)

9.53

Isoelectric Point (pI)

54.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014614)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G14180
fragaria_vesca FvH4_6g35290
malus_domestica MD09G1176900.v1.1 MD17G1149900.v1.1
prunus_persica Prupe.3G036000_v2.0.a1
pyrus_communis pycom09g09510
rosa_chinensis RchiOBHm_Chr2g0146731
rosa_laevigata RLG00000001092 RLG00000020217
rosa_multiflora Rmu_co8475067.1_g000001
rosa_roxburghii Rroxscaffold_2G00099960
rosa_rugosa Rorug02G0396200
rosa_samantha Rh2AG452700 Rh2BG465400 Rh2CG439600 Rh2DG474400
rosa_wichuraiana Rw2G036960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 901
AatII GACGTC 1 cut(s) 312
Acc36I ACCTGC 1 cut(s) 901
AccB1I GGYRCC 2 cut(s) 97, 118
AccB7I CCANNNNNTGG 1 cut(s) 441
AccBSI CCGCTC 1 cut(s) 706
AclWI GGATC 3 cut(s) 13, 55, 380
AcsI RAATTY 2 cut(s) 274, 866
AcyI GRCGYC 4 cut(s) 32, 119, 125, 309
AfaI GTAC 1 cut(s) 254
AfiI CCNNNNNNNGG 6 cut(s) 28, 35, 142, 170, 441, 509
AflII CTTAAG 1 cut(s) 1010
AgsI TTSAA 1 cut(s) 280
AjnI CCWGG 2 cut(s) 502, 577
AluBI AGCT 6 cut(s) 262, 400, 670, 955, 961, 1009
AluI AGCT 6 cut(s) 262, 400, 670, 955, 961, 1009
Alw26I GTCTC 1 cut(s) 887
AlwI GGATC 3 cut(s) 13, 55, 380
Ama87I CYCGRG 1 cut(s) 852
AoxI GGCC 2 cut(s) 443, 476
ApaI GGGCCC 1 cut(s) 480
ApeKI GCWGC 8 cut(s) 130, 180, 318, 419, 488, 730, 907, 961
ApoI RAATTY 2 cut(s) 274, 866
AspLEI GCGC 2 cut(s) 121, 535
AspS9I GGNCC 4 cut(s) 431, 476, 477, 500
AsuC2I CCSGG 1 cut(s) 664
AsuHPI GGTGA 2 cut(s) 18, 97
AvaI CYCGRG 1 cut(s) 852
AvaII GGWCC 2 cut(s) 431, 500
BaeGI GKGCMC 1 cut(s) 480
BanI GGYRCC 2 cut(s) 97, 118
BanII GRGCYC 1 cut(s) 480
BbsI GAAGAC 1 cut(s) 992
BbvI GCAGC 8 cut(s) 142, 192, 330, 431, 475, 717, 919, 948
BccI CCATC 6 cut(s) 409, 547, 785, 819, 916, 1065
BceAI ACGGC 2 cut(s) 85, 148
BcgI CGANNNNNNTGC 6 cut(s) 56, 90, 208, 242, 541, 575
BciT130I CCWGG 2 cut(s) 504, 579
BcnI CCSGG 1 cut(s) 664
BcoDI GTCTC 1 cut(s) 887
BfaI CTAG 1 cut(s) 1093
BfmI CTRYAG 1 cut(s) 962
BfoI RGCGCY 1 cut(s) 122
BfrI CTTAAG 1 cut(s) 1010
BfuAI ACCTGC 1 cut(s) 901
BlpI GCTNAGC 1 cut(s) 263
Bme1390I CCNGG 3 cut(s) 504, 579, 664
Bme18I GGWCC 2 cut(s) 431, 500
BmeT110I CYCGRG 1 cut(s) 852
BmgT120I GGNCC 4 cut(s) 431, 476, 477, 500
BmiI GGNNCC 5 cut(s) 99, 120, 433, 478, 501
BmrFI CCNGG 3 cut(s) 504, 579, 664
BmrI ACTGGG 1 cut(s) 429
BmuI ACTGGG 1 cut(s) 429
BpiI GAAGAC 1 cut(s) 992
BpmI CTGGAG 2 cut(s) 226, 977
Bpu10I CCTNAGC 1 cut(s) 492
Bpu1102I GCTNAGC 1 cut(s) 263
BpuEI CTTGAG 1 cut(s) 422
BpuMI CCSGG 1 cut(s) 664
Bsa29I ATCGAT 1 cut(s) 375
BsaHI GRCGYC 4 cut(s) 32, 119, 125, 309
BsaJI CCNNGG 5 cut(s) 62, 577, 629, 663, 948
BsaXI ACNNNNNCTCC 2 cut(s) 1018, 1048
Bsc4I CCNNNNNNNGG 6 cut(s) 28, 35, 142, 170, 441, 509
Bse118I RCCGGY 3 cut(s) 28, 121, 562
Bse1I ACTGG 2 cut(s) 296, 435
BseBI CCWGG 2 cut(s) 504, 579
BseCI ATCGAT 1 cut(s) 375
BseDI CCNNGG 5 cut(s) 62, 577, 629, 663, 948
BseGI GGATG 4 cut(s) 16, 661, 830, 942
BseLI CCNNNNNNNGG 6 cut(s) 28, 35, 142, 170, 441, 509
BseMII CTCAG 3 cut(s) 122, 254, 1019
BseNI ACTGG 2 cut(s) 296, 435
BseRI GAGGAG 7 cut(s) 20, 472, 733, 831, 834, 1042, 1045
BseSI GKGCMC 1 cut(s) 480
BseXI GCAGC 8 cut(s) 142, 192, 330, 431, 475, 717, 919, 948
Bsh1285I CGRYCG 2 cut(s) 76, 567
BshFI GGCC 2 cut(s) 445, 478
BshNI GGYRCC 2 cut(s) 97, 118
BshVI ATCGAT 1 cut(s) 375
BsiEI CGRYCG 2 cut(s) 76, 567
BsiHKCI CYCGRG 1 cut(s) 852
BsiSI CCGG 7 cut(s) 29, 53, 116, 122, 563, 663, 734
BslFI GGGAC 2 cut(s) 614, 662
BslI CCNNNNNNNGG 6 cut(s) 28, 35, 142, 170, 441, 509
BsmAI GTCTC 1 cut(s) 887
BsmFI GGGAC 2 cut(s) 614, 662
BsmI GAATGC 3 cut(s) 564, 975, 1051
BsnI GGCC 2 cut(s) 445, 478
BsoBI CYCGRG 1 cut(s) 852
Bsp120I GGGCCC 1 cut(s) 476
Bsp1286I GDGCHC 1 cut(s) 480
Bsp143I GATC 5 cut(s) 18, 47, 231, 372, 463
Bsp1720I GCTNAGC 1 cut(s) 263
BspANI GGCC 2 cut(s) 445, 478
BspCNI CTCAG 3 cut(s) 121, 255, 1018
BspDI ATCGAT 1 cut(s) 375
BspHI TCATGA 1 cut(s) 981
BspLI GGNNCC 5 cut(s) 99, 120, 433, 478, 501
BspMAI CTGCAG 1 cut(s) 966
BspMI ACCTGC 1 cut(s) 901
BspPI GGATC 3 cut(s) 13, 55, 380
BspT107I GGYRCC 2 cut(s) 97, 118
BspTI CTTAAG 1 cut(s) 1010
BsrBI CCGCTC 1 cut(s) 706
BsrFI RCCGGY 3 cut(s) 28, 121, 562
BsrI ACTGG 2 cut(s) 296, 435
BssAI RCCGGY 3 cut(s) 28, 121, 562
BssECI CCNNGG 5 cut(s) 62, 577, 629, 663, 948
BssMI GATC 5 cut(s) 18, 47, 231, 372, 463
BssNI GRCGYC 4 cut(s) 32, 119, 125, 309
BssT1I CCWWGG 1 cut(s) 948
Bst2UI CCWGG 2 cut(s) 504, 579
Bst4CI ACNGT 6 cut(s) 74, 85, 91, 382, 727, 1079
Bst6I CTCTTC 1 cut(s) 704
BstACI GRCGYC 4 cut(s) 32, 119, 125, 309
BstAFI CTTAAG 1 cut(s) 1010
BstAPI GCANNNNNTGC 1 cut(s) 970
BstC8I GCNNGC 4 cut(s) 123, 156, 424, 888
BstDEI CTNAG 4 cut(s) 108, 263, 492, 1005
BstDSI CCRYGG 1 cut(s) 629
BstEII GGTNACC 1 cut(s) 1052
BstF5I GGATG 4 cut(s) 16, 661, 830, 942
BstH2I RGCGCY 1 cut(s) 122
BstHHI GCGC 2 cut(s) 121, 535
BstKTI GATC 5 cut(s) 21, 50, 234, 375, 466
BstMAI GTCTC 1 cut(s) 887
BstMBI GATC 5 cut(s) 18, 47, 231, 372, 463
BstMCI CGRYCG 2 cut(s) 76, 567
BstMWI GCNNNNNNNGC 8 cut(s) 58, 127, 160, 513, 712, 896, 961, 970
BstNI CCWGG 2 cut(s) 504, 579
BstNSI RCATGY 1 cut(s) 890
BstPI GGTNACC 1 cut(s) 1052
BstSCI CCNGG 3 cut(s) 502, 577, 662
BstSFI CTRYAG 1 cut(s) 962
BstSLI GKGCMC 1 cut(s) 480
BstV1I GCAGC 8 cut(s) 142, 192, 330, 431, 475, 717, 919, 948
BstV2I GAAGAC 1 cut(s) 992
BstX2I RGATCY 1 cut(s) 18
BstXI CCANNNNNNTGG 1 cut(s) 955
BstYI RGATCY 1 cut(s) 18
Bsu15I ATCGAT 1 cut(s) 375
BsuRI GGCC 2 cut(s) 445, 478
BsuTUI ATCGAT 1 cut(s) 375
BtgI CCRYGG 1 cut(s) 629
BtsCI GGATG 4 cut(s) 16, 661, 830, 942
BtsIMutI CAGTG 4 cut(s) 289, 365, 843, 1084
BveI ACCTGC 1 cut(s) 901
Cac8I GCNNGC 4 cut(s) 123, 156, 424, 888
CciI TCATGA 1 cut(s) 981
CfoI GCGC 2 cut(s) 121, 535
Cfr10I RCCGGY 3 cut(s) 28, 121, 562
Cfr13I GGNCC 4 cut(s) 431, 476, 477, 500
ClaI ATCGAT 1 cut(s) 375
CseI GACGC 3 cut(s) 21, 114, 160
Csp6I GTAC 1 cut(s) 253
CspCI CAANNNNNGTGG 4 cut(s) 618, 653, 739, 774
CviAII CATG 3 cut(s) 887, 982, 1016
CviQI GTAC 1 cut(s) 253
DdeI CTNAG 4 cut(s) 108, 263, 492, 1005
DinI GGCGCC 1 cut(s) 120
DpnI GATC 5 cut(s) 20, 49, 233, 374, 465
DpnII GATC 5 cut(s) 18, 47, 231, 372, 463
Eam1104I CTCTTC 1 cut(s) 704
EarI CTCTTC 1 cut(s) 704
EciI GGCGGA 5 cut(s) 190, 201, 320, 444, 730
Eco130I CCWWGG 1 cut(s) 948
Eco24I GRGCYC 1 cut(s) 480
Eco47I GGWCC 2 cut(s) 431, 500
Eco88I CYCGRG 1 cut(s) 852
Eco91I GGTNACC 1 cut(s) 1052
EcoO109I RGGNCCY 2 cut(s) 477, 500
EcoO65I GGTNACC 1 cut(s) 1052
EcoRII CCWGG 2 cut(s) 502, 577
EcoT14I CCWWGG 1 cut(s) 948
EcoT38I GRGCYC 1 cut(s) 480
EgeI GGCGCC 1 cut(s) 120
EheI GGCGCC 1 cut(s) 120
ErhI CCWWGG 1 cut(s) 948
FaeI CATG 3 cut(s) 890, 985, 1019
FaiI YATR 7 cut(s) 333, 396, 882, 888, 983, 1017, 1062
FaqI GGGAC 2 cut(s) 614, 662
FatI CATG 3 cut(s) 886, 981, 1015
FauI CCCGC 2 cut(s) 415, 515
FokI GGATG 4 cut(s) 23, 668, 837, 949
FriOI GRGCYC 1 cut(s) 480
FspBI CTAG 1 cut(s) 1093
GlaI GCGC 2 cut(s) 120, 534
GsuI CTGGAG 2 cut(s) 226, 977
HaeII RGCGCY 1 cut(s) 122
HaeIII GGCC 2 cut(s) 445, 478
HapII CCGG 7 cut(s) 29, 53, 116, 122, 563, 663, 734
HgaI GACGC 3 cut(s) 21, 114, 160
HhaI GCGC 2 cut(s) 121, 535
Hin1I GRCGYC 4 cut(s) 32, 119, 125, 309
Hin1II CATG 3 cut(s) 890, 985, 1019
Hin6I GCGC 2 cut(s) 119, 533
HinP1I GCGC 2 cut(s) 119, 533
HindIII AAGCTT 1 cut(s) 398
HinfI GANTC 6 cut(s) 56, 112, 602, 650, 659, 850
HpaII CCGG 7 cut(s) 29, 53, 116, 122, 563, 663, 734
HphI GGTGA 2 cut(s) 18, 97
Hpy166II GTNNAC 1 cut(s) 748
Hpy188I TCNGA 3 cut(s) 78, 111, 655
Hpy188III TCNNGA 2 cut(s) 385, 982
Hpy8I GTNNAC 1 cut(s) 748
Hpy99I CGWCG 5 cut(s) 37, 106, 130, 169, 314
HpyAV CCTTC 3 cut(s) 186, 206, 289
HpyCH4III ACNGT 6 cut(s) 74, 85, 91, 382, 727, 1079
HpyCH4IV ACGT 1 cut(s) 309
HpyCH4V TGCA 4 cut(s) 890, 907, 964, 973
HpyF10VI GCNNNNNNNGC 8 cut(s) 58, 127, 160, 513, 712, 896, 961, 970
HpyF3I CTNAG 4 cut(s) 108, 263, 492, 1005
HpySE526I ACGT 1 cut(s) 309
Hsp92I GRCGYC 4 cut(s) 32, 119, 125, 309
Hsp92II CATG 3 cut(s) 890, 985, 1019
HspAI GCGC 2 cut(s) 119, 533
KasI GGCGCC 1 cut(s) 118
KroI GCCGGC 1 cut(s) 121
KroNI GCCGGC 1 cut(s) 123
Kzo9I GATC 5 cut(s) 18, 47, 231, 372, 463
LmnI GCTCC 7 cut(s) 177, 207, 215, 259, 667, 952, 958
Lsp1109I GCAGC 8 cut(s) 142, 192, 330, 431, 475, 717, 919, 948
MaeI CTAG 1 cut(s) 1093
MaeII ACGT 1 cut(s) 309
MaeIII GTNAC 2 cut(s) 85, 1052
MalI GATC 5 cut(s) 20, 49, 233, 374, 465
MbiI CCGCTC 1 cut(s) 706
MboI GATC 5 cut(s) 18, 47, 231, 372, 463
MboII GAAGA 5 cut(s) 400, 424, 721, 970, 997
MflI RGATCY 1 cut(s) 18
MhlI GDGCHC 1 cut(s) 480
MluCI AATT 3 cut(s) 274, 845, 866
Mly113I GGCGCC 1 cut(s) 119
MlyI GAGTC 5 cut(s) 65, 596, 644, 668, 844
MmeI TCCRAC 2 cut(s) 56, 760
MreI CGCCGGCG 1 cut(s) 121
MroNI GCCGGC 1 cut(s) 121
MseI TTAA 1 cut(s) 1011
MslI CAYNNNNRTG 1 cut(s) 1020
MspA1I CMGCKG 3 cut(s) 183, 224, 422
MspCI CTTAAG 1 cut(s) 1010
MspI CCGG 7 cut(s) 29, 53, 116, 122, 563, 663, 734
MspR9I CCNGG 3 cut(s) 504, 579, 664
Mva1269I GAATGC 3 cut(s) 564, 975, 1051
MvaI CCWGG 2 cut(s) 504, 579
MwoI GCNNNNNNNGC 8 cut(s) 58, 127, 160, 513, 712, 896, 961, 970
NaeI GCCGGC 1 cut(s) 123
NarI GGCGCC 1 cut(s) 119
NciI CCSGG 1 cut(s) 664
NdeII GATC 5 cut(s) 18, 47, 231, 372, 463
NgoMIV GCCGGC 1 cut(s) 121
NlaIII CATG 3 cut(s) 890, 985, 1019
NlaIV GGNNCC 5 cut(s) 99, 120, 433, 478, 501
NmeAIII GCCGAG 1 cut(s) 87
NmuCI GTSAC 1 cut(s) 85
NspI RCATGY 1 cut(s) 890
PaeI GCATGC 1 cut(s) 890
PagI TCATGA 1 cut(s) 981
PaqCI CACCTGC 1 cut(s) 901
PcsI WCGNNNNNNNCGW 2 cut(s) 680, 699
PctI GAATGC 3 cut(s) 564, 975, 1051
PdiI GCCGGC 1 cut(s) 123
PfeI GAWTC 1 cut(s) 112
PflFI GACNNNGTC 1 cut(s) 311
PflMI CCANNNNNTGG 1 cut(s) 441
PleI GAGTC 5 cut(s) 64, 596, 644, 667, 844
PluTI GGCGCC 1 cut(s) 122
PpsI GAGTC 5 cut(s) 64, 596, 644, 667, 844
PpuMI RGGWCCY 1 cut(s) 500
Psp5II RGGWCCY 1 cut(s) 500
Psp6I CCWGG 2 cut(s) 502, 577
PspEI GGTNACC 1 cut(s) 1052
PspGI CCWGG 2 cut(s) 502, 577
PspN4I GGNNCC 5 cut(s) 99, 120, 433, 478, 501
PspOMI GGGCCC 1 cut(s) 476
PspPI GGNCC 4 cut(s) 431, 476, 477, 500
PspPPI RGGWCCY 1 cut(s) 500
PstI CTGCAG 1 cut(s) 966
PsuI RGATCY 1 cut(s) 18
PsyI GACNNNGTC 1 cut(s) 311
RsaI GTAC 1 cut(s) 254
RsaNI GTAC 1 cut(s) 253
RseI CAYNNNNRTG 1 cut(s) 1020
SaqAI TTAA 1 cut(s) 1011
Sau3AI GATC 5 cut(s) 18, 47, 231, 372, 463
Sau96I GGNCC 4 cut(s) 431, 476, 477, 500
SchI GAGTC 5 cut(s) 65, 596, 644, 668, 844
ScrFI CCNGG 3 cut(s) 504, 579, 664
SduI GDGCHC 1 cut(s) 480
SfcI CTRYAG 1 cut(s) 962
SfoI GGCGCC 1 cut(s) 120
SgrAI CRCCGGYG 2 cut(s) 28, 121
SinI GGWCC 2 cut(s) 431, 500
SmiMI CAYNNNNRTG 1 cut(s) 1020
SmlI CTYRAG 2 cut(s) 401, 1010
SmoI CTYRAG 2 cut(s) 401, 1010
SphI GCATGC 1 cut(s) 890
Sse9I AATT 3 cut(s) 274, 845, 866
SspDI GGCGCC 1 cut(s) 118
SspMI CTAG 1 cut(s) 1093
StyD4I CCNGG 3 cut(s) 502, 577, 662
StyI CCWWGG 1 cut(s) 948
TaaI ACNGT 6 cut(s) 74, 85, 91, 382, 727, 1079
TaiI ACGT 1 cut(s) 312
TaqI TCGA 7 cut(s) 234, 375, 410, 462, 605, 683, 702
TasI AATT 3 cut(s) 274, 845, 866
TauI GCSGC 2 cut(s) 186, 429
TfiI GAWTC 1 cut(s) 112
Tru1I TTAA 1 cut(s) 1011
Tru9I TTAA 1 cut(s) 1011
TscAI CASTG 4 cut(s) 296, 365, 843, 1084
TseFI GTSAC 1 cut(s) 85
TseI GCWGC 8 cut(s) 130, 180, 318, 419, 488, 730, 907, 961
Tsp45I GTSAC 1 cut(s) 85
TspDTI ATGAA 4 cut(s) 878, 953, 970, 998
TspGWI ACGGA 1 cut(s) 646
TspRI CASTG 4 cut(s) 296, 365, 843, 1084
Tth111I GACNNNGTC 1 cut(s) 311
Van91I CCANNNNNTGG 1 cut(s) 441
Vha464I CTTAAG 1 cut(s) 1010
VpaK11BI GGWCC 2 cut(s) 431, 500
XapI RAATTY 2 cut(s) 274, 866
XceI RCATGY 1 cut(s) 890
XspI CTAG 1 cut(s) 1093
ZraI GACGTC 1 cut(s) 310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.