Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0014614

Physical Location & Seq

Genomic Coordinates Reverse (-)

59651184 .. 59667021

Gene Structure 15838 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG439600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1260 bp

ATGGAGGAGGACGACGAGATGCATTCACCGGTGTCGGCGGGGAGCGGATCTCCGGCGTCGCCGAGGGCGAACGGTCGGATAACGGTGACGGTGGCGGTTCCGTCTCAGATACCGGCGGCGGCGGCGCAAGAGTCGCCGCAGAACAACACGCTAACCCTAGCGCTGCCGTCGCAGGTCAGAAGCAGCGGCGGGAGGGAGGACTGCTGGAGCGAAAGCGCGACGGCGGTGCTGATCGAGGCGTGGGGGGAGAGGTACCTGGAGCTGAGCAGAGGGAACCTAAAGCAGAAGCACTGGAAGGAGGTGGCCGACATTGTGAGTATCAGAGAGGACTATGGGAAAATCCCCAAAACTGATATCCAGTGCAAGAACAGAATCGACACTGTGAAGAAGAAGTATAAGTTGGAGAAATCGAAGATGATGGCCGGAGGTGGGCCGAGCAAGTGGCCCTTTTTCGAAAAGCTTGATCATTTGATTGGCGCCACTGCTAAGGGTACCCCTGGTTCTGCTTCTGGTGGTGGTTCAGTGCCGCCGGGTTTCTTGGCTAAGAACCATAAGATTCCGATGGGAATGCCGGTCGGGGTCCGAGGAGGAGGAGTTGGTCATTTTGTCCCCAAACACCAGCAGCAGCTGCAGAAGGCAAATGCTAAGAAAAGGGATCTGGTGGAGTGGGATTCGGATTCTTCAAGGGAGGTCTCTCCGGTCTCTGCTGATAGCTTTCCGCCGCCTGTTTCTGAGCTGAAGAGGCCGAGGATGGCAGGGCGGGGGGCAATGCTGAGGTTCGGGGAGGCTTATGAGCATGCCGAGACTGCAAAGCTGCAGCAGGTGGTGGAGATGGAGAAGCAGAGGATGAAGTTTGCTAAAGAGTTGGAGTTGCAAAGAATGCAGTTTTTCATGAAGACCCAGCTGGAGATTTCGCAGCTCAAGCATGGTAGGAGGAATGGGAATGCGAAATGTGAACTCAACATGAGGCACTCAAAGATTGAGTTGAGTTGGGAAAAGAGTTCACTAAAATTAGGAGGGAAAATGGAAGGAGTAGGCCTTGGTGCTCATGCTGTCATGGCCAATGGTGGCGTTATAGCACCAGTTGGTTTGAATATGGTTGCACTTGCAGCCCAAAGGCATGATGTCCCTTTTGTTGTGCTTGCTGGCGGTTACAAGCTGAGCTCTGGGGTTGTTGTTGACAACTCAGGGCGTATAACTCGTCAAGACTTCCGACTTCTTGTCTTCTTCCGCAGAGGCCTTGTGCCTCCAAGTCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006355 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0010029 GO:0010033 GO:0010154 GO:0010431 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0021700 GO:0022414 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032504 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044212 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048316 GO:0048580 GO:0048608 GO:0048609 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071695 GO:0080090 GO:0097159 GO:0140110 GO:1900140 GO:1901363 GO:1903506 GO:2000026 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-bind_4

Protein Analysis

419

Amino Acids

45.69

Weight (kDa)

9.72

Isoelectric Point (pI)

48.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-bind_4	PF13837	67 - 157	4e-20	Myb/SANT-like DNA-binding domain
IF-2B	PF01008	345 - 396	9.1e-10	Initiation factor 2 subunit family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014614)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14180
fragaria_vesca	FvH4_6g35290
malus_domestica	MD09G1176900.v1.1 MD17G1149900.v1.1
prunus_persica	Prupe.3G036000_v2.0.a1
pyrus_communis	pycom09g09510
rosa_chinensis	RchiOBHm_Chr2g0146731
rosa_laevigata	RLG00000001092 RLG00000020217
rosa_multiflora	Rmu_co8475067.1_g000001
rosa_roxburghii	Rroxscaffold_2G00099960
rosa_rugosa	Rorug02G0396200
rosa_samantha	Rh2AG452700 Rh2BG465400 Rh2CG439600 Rh2DG474400
rosa_wichuraiana	Rw2G036960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	811
Acc36I	ACCTGC	2 cut(s)	163, 811
Acc65I	GGTACC	2 cut(s)	252, 491
AccB1I	GGYRCC	3 cut(s)	252, 476, 491
AccBSI	CCGCTC	1 cut(s)	45
AccII	CGCG	1 cut(s)	218
AclWI	GGATC	2 cut(s)	55, 663
AcoI	YGGCCR	3 cut(s)	303, 420, 1059
AcuI	CTGAAG	1 cut(s)	758
AcyI	GRCGYC	2 cut(s)	56, 477
AfaI	GTAC	2 cut(s)	254, 493
AfeI	AGCGCT	1 cut(s)	162
AfiI	CCNNNNNNNGG	1 cut(s)	429
AgeI	ACCGGT	1 cut(s)	28
AgsI	TTSAA	2 cut(s)	684, 1093
AhdI	GACNNNNNGTC	1 cut(s)	1220
AjnI	CCWGG	2 cut(s)	255, 496
AjuI	GAANNNNNNNTTGG	2 cut(s)	383, 415
Alw21I	GWGCWC	2 cut(s)	1048, 1166
Alw26I	GTCTC	4 cut(s)	108, 697, 706, 797
AlwI	GGATC	2 cut(s)	55, 663
AlwNI	CAGNNNCTG	1 cut(s)	628
Aor51HI	AGCGCT	1 cut(s)	162
AoxI	GGCC	8 cut(s)	303, 420, 431, 443, 743, 1036, 1059, 1237
ApeKI	GCWGC	9 cut(s)	163, 183, 622, 625, 628, 814, 817, 916, 1109
AsiGI	ACCGGT	1 cut(s)	28
Asp718I	GGTACC	2 cut(s)	252, 491
AspLEI	GCGC	4 cut(s)	127, 163, 218, 479
AspS9I	GGNCC	3 cut(s)	431, 444, 580
AsuC2I	CCSGG	1 cut(s)	531
AsuHPI	GGTGA	2 cut(s)	18, 97
AsuII	TTCGAA	1 cut(s)	453
AvaII	GGWCC	1 cut(s)	580
BalI	TGGCCA	1 cut(s)	1061
BanI	GGYRCC	3 cut(s)	252, 476, 491
BanII	GRGCYC	1 cut(s)	1166
BbsI	GAAGAC	2 cut(s)	902, 1216
Bbv12I	GWGCWC	2 cut(s)	1048, 1166
BbvCI	CCTCAGC	1 cut(s)	773
BbvI	GCAGC	9 cut(s)	150, 195, 615, 634, 637, 801, 829, 928, 1121
BccI	CCATC	4 cut(s)	412, 556, 745, 826
BceAI	ACGGC	2 cut(s)	151, 237
BcgI	CGANNNNNNTGC	4 cut(s)	208, 242, 550, 584
BciT130I	CCWGG	2 cut(s)	257, 498
BclI	TGATCA	1 cut(s)	463
BcnI	CCSGG	1 cut(s)	531
BcoDI	GTCTC	4 cut(s)	108, 697, 706, 797
BfaI	CTAG	1 cut(s)	158
BfmI	CTRYAG	2 cut(s)	629, 815
BfoI	RGCGCY	2 cut(s)	164, 480
BfuAI	ACCTGC	2 cut(s)	163, 811
BlpI	GCTNAGC	2 cut(s)	263, 1160
Bme1390I	CCNGG	3 cut(s)	257, 498, 531
Bme18I	GGWCC	1 cut(s)	580
BmeRI	GACNNNNNGTC	1 cut(s)	1220
BmgT120I	GGNCC	3 cut(s)	431, 444, 580
BmiI	GGNNCC	6 cut(s)	99, 254, 275, 478, 493, 581
BmrFI	CCNGG	3 cut(s)	257, 498, 531
BmsI	GCATC	1 cut(s)	9
BpiI	GAAGAC	2 cut(s)	902, 1216
BplI	GAGNNNNNCTC	2 cut(s)	34, 66
BpmI	CTGGAG	3 cut(s)	226, 278, 926
Bpu10I	CCTNAGC	2 cut(s)	486, 773
Bpu1102I	GCTNAGC	2 cut(s)	263, 1160
Bpu14I	TTCGAA	1 cut(s)	453
BpuEI	CTTGAG	1 cut(s)	905
BpuMI	CCSGG	1 cut(s)	531
BsaHI	GRCGYC	2 cut(s)	56, 477
BsaI	GGTCTC	2 cut(s)	697, 706
BsaJI	CCNNGG	5 cut(s)	62, 496, 583, 746, 1039
BsaWI	WCCGGW	2 cut(s)	28, 697
BsaXI	ACNNNNNCTCC	2 cut(s)	579, 609
Bsc4I	CCNNNNNNNGG	1 cut(s)	429
Bse118I	RCCGGY	3 cut(s)	28, 112, 571
Bse1I	ACTGG	3 cut(s)	296, 358, 1082
Bse3DI	GCAATG	1 cut(s)	774
BseBI	CCWGG	2 cut(s)	257, 498
BseDI	CCNNGG	5 cut(s)	62, 496, 583, 746, 1039
BseGI	GGATG	2 cut(s)	756, 852
BseLI	CCNNNNNNNGG	1 cut(s)	429
BseMI	GCAATG	1 cut(s)	774
BseMII	CTCAG	6 cut(s)	119, 254, 723, 764, 1151, 1200
BseNI	ACTGG	3 cut(s)	296, 358, 1082
BseRI	GAGGAG	4 cut(s)	20, 600, 603, 606
BseXI	GCAGC	9 cut(s)	150, 195, 615, 634, 637, 801, 829, 928, 1121
BseYI	CCCAGC	1 cut(s)	900
Bsh1236I	CGCG	1 cut(s)	218
Bsh1285I	CGRYCG	2 cut(s)	76, 576
BshFI	GGCC	8 cut(s)	305, 422, 433, 445, 745, 1038, 1061, 1239
BshNI	GGYRCC	3 cut(s)	252, 476, 491
BshTI	ACCGGT	1 cut(s)	28
BsiEI	CGRYCG	2 cut(s)	76, 576
BsiHKAI	GWGCWC	2 cut(s)	1048, 1166
BsiSI	CCGG	7 cut(s)	29, 53, 113, 423, 530, 572, 698
BslFI	GGGAC	2 cut(s)	593, 1112
BslI	CCNNNNNNNGG	1 cut(s)	429
BsmAI	GTCTC	4 cut(s)	108, 697, 706, 797
BsmBI	CGTCTC	1 cut(s)	108
BsmFI	GGGAC	2 cut(s)	593, 1112
BsmI	GAATGC	4 cut(s)	22, 573, 885, 949
BsnI	GGCC	8 cut(s)	305, 422, 433, 445, 745, 1038, 1061, 1239
Bso31I	GGTCTC	2 cut(s)	697, 706
Bsp119I	TTCGAA	1 cut(s)	453
Bsp1286I	GDGCHC	2 cut(s)	1048, 1166
Bsp143I	GATC	4 cut(s)	47, 231, 463, 655
Bsp1720I	GCTNAGC	2 cut(s)	263, 1160
BspANI	GGCC	8 cut(s)	305, 422, 433, 445, 745, 1038, 1061, 1239
BspCNI	CTCAG	6 cut(s)	118, 255, 724, 765, 1152, 1199
BspFNI	CGCG	1 cut(s)	218
BspHI	TCATGA	1 cut(s)	891
BspLI	GGNNCC	6 cut(s)	99, 254, 275, 478, 493, 581
BspMAI	CTGCAG	2 cut(s)	633, 819
BspMI	ACCTGC	2 cut(s)	163, 811
BspPI	GGATC	2 cut(s)	55, 663
BspT104I	TTCGAA	1 cut(s)	453
BspT107I	GGYRCC	3 cut(s)	252, 476, 491
BspTNI	GGTCTC	2 cut(s)	697, 706
BsrBI	CCGCTC	1 cut(s)	45
BsrDI	GCAATG	1 cut(s)	774
BsrFI	RCCGGY	3 cut(s)	28, 112, 571
BsrI	ACTGG	3 cut(s)	296, 358, 1082
BssAI	RCCGGY	3 cut(s)	28, 112, 571
BssECI	CCNNGG	5 cut(s)	62, 496, 583, 746, 1039
BssMI	GATC	4 cut(s)	47, 231, 463, 655
BssNI	GRCGYC	2 cut(s)	56, 477
BssT1I	CCWWGG	1 cut(s)	1039
Bst2UI	CCWGG	2 cut(s)	257, 498
Bst4CI	ACNGT	4 cut(s)	74, 85, 91, 382
Bst6I	CTCTTC	1 cut(s)	734
BstACI	GRCGYC	2 cut(s)	56, 477
BstAPI	GCANNNNNTGC	2 cut(s)	628, 880
BstBI	TTCGAA	1 cut(s)	453
BstC8I	GCNNGC	3 cut(s)	798, 1143, 1147
BstDEI	CTNAG	9 cut(s)	105, 263, 486, 543, 645, 732, 773, 1160, 1186
BstF5I	GGATG	2 cut(s)	756, 852
BstFNI	CGCG	1 cut(s)	218
BstH2I	RGCGCY	2 cut(s)	164, 480
BstHHI	GCGC	4 cut(s)	127, 163, 218, 479
BstKTI	GATC	4 cut(s)	50, 234, 466, 658
BstMAI	GTCTC	4 cut(s)	108, 697, 706, 797
BstMBI	GATC	4 cut(s)	47, 231, 463, 655
BstMCI	CGRYCG	2 cut(s)	76, 576
BstNI	CCWGG	2 cut(s)	257, 498
BstNSI	RCATGY	1 cut(s)	800
BstSCI	CCNGG	3 cut(s)	255, 496, 529
BstSFI	CTRYAG	2 cut(s)	629, 815
BstUI	CGCG	1 cut(s)	218
BstV1I	GCAGC	9 cut(s)	150, 195, 615, 634, 637, 801, 829, 928, 1121
BstV2I	GAAGAC	2 cut(s)	902, 1216
BstX2I	RGATCY	2 cut(s)	47, 655
BstYI	RGATCY	2 cut(s)	47, 655
BsuRI	GGCC	8 cut(s)	305, 422, 433, 445, 745, 1038, 1061, 1239
BtsCI	GGATG	2 cut(s)	756, 852
BtsI	GCAGTG	1 cut(s)	480
BtsIMutI	CAGTG	5 cut(s)	289, 365, 378, 480, 528
BveI	ACCTGC	2 cut(s)	163, 811
Cac8I	GCNNGC	3 cut(s)	798, 1143, 1147
CaiI	CAGNNNCTG	1 cut(s)	628
CciI	TCATGA	1 cut(s)	891
CfoI	GCGC	4 cut(s)	127, 163, 218, 479
Cfr10I	RCCGGY	3 cut(s)	28, 112, 571
Cfr13I	GGNCC	3 cut(s)	431, 444, 580
CseI	GACGC	1 cut(s)	45
Csp6I	GTAC	2 cut(s)	253, 492
CspAI	ACCGGT	1 cut(s)	28
CviAII	CATG	7 cut(s)	797, 892, 926, 964, 1049, 1057, 1121
CviQI	GTAC	2 cut(s)	253, 492
DdeI	CTNAG	9 cut(s)	105, 263, 486, 543, 645, 732, 773, 1160, 1186
DinI	GGCGCC	1 cut(s)	478
DpnI	GATC	4 cut(s)	49, 233, 465, 657
DpnII	GATC	4 cut(s)	47, 231, 463, 655
DriI	GACNNNNNGTC	1 cut(s)	1220
EaeI	YGGCCR	3 cut(s)	303, 420, 1059
Eam1104I	CTCTTC	1 cut(s)	734
Eam1105I	GACNNNNNGTC	1 cut(s)	1220
EarI	CTCTTC	1 cut(s)	734
EciI	GGCGGA	1 cut(s)	708
Ecl136II	GAGCTC	1 cut(s)	1164
Eco130I	CCWWGG	1 cut(s)	1039
Eco147I	AGGCCT	2 cut(s)	1038, 1239
Eco24I	GRGCYC	1 cut(s)	1166
Eco31I	GGTCTC	2 cut(s)	697, 706
Eco32I	GATATC	1 cut(s)	355
Eco47I	GGWCC	1 cut(s)	580
Eco47III	AGCGCT	1 cut(s)	162
Eco53kI	GAGCTC	1 cut(s)	1164
Eco57I	CTGAAG	1 cut(s)	758
EcoICRI	GAGCTC	1 cut(s)	1164
EcoRII	CCWGG	2 cut(s)	255, 496
EcoRV	GATATC	1 cut(s)	355
EcoT14I	CCWWGG	1 cut(s)	1039
EcoT22I	ATGCAT	1 cut(s)	24
EcoT38I	GRGCYC	1 cut(s)	1166
EgeI	GGCGCC	1 cut(s)	478
EheI	GGCGCC	1 cut(s)	478
ErhI	CCWWGG	1 cut(s)	1039
Esp3I	CGTCTC	1 cut(s)	108
FaeI	CATG	7 cut(s)	800, 895, 929, 967, 1052, 1060, 1124
FalI	AAGNNNNNCTT	2 cut(s)	431, 463
FaqI	GGGAC	2 cut(s)	593, 1112
FatI	CATG	7 cut(s)	796, 891, 925, 963, 1048, 1056, 1120
FauI	CCCGC	3 cut(s)	31, 182, 753
FbaI	TGATCA	1 cut(s)	463
FokI	GGATG	2 cut(s)	763, 859
FriOI	GRGCYC	1 cut(s)	1166
FspBI	CTAG	1 cut(s)	158
GlaI	GCGC	4 cut(s)	126, 162, 217, 478
GsaI	CCCAGC	1 cut(s)	904
GsuI	CTGGAG	3 cut(s)	226, 278, 926
HaeII	RGCGCY	2 cut(s)	164, 480
HaeIII	GGCC	8 cut(s)	305, 422, 433, 445, 745, 1038, 1061, 1239
HapII	CCGG	7 cut(s)	29, 53, 113, 423, 530, 572, 698
HgaI	GACGC	1 cut(s)	45
HhaI	GCGC	4 cut(s)	127, 163, 218, 479
Hin1I	GRCGYC	2 cut(s)	56, 477
Hin1II	CATG	7 cut(s)	800, 895, 929, 967, 1052, 1060, 1124
Hin6I	GCGC	4 cut(s)	125, 161, 216, 477
HinP1I	GCGC	4 cut(s)	125, 161, 216, 477
HincII	GTYRAC	1 cut(s)	1180
HindII	GTYRAC	1 cut(s)	1180
HindIII	AAGCTT	1 cut(s)	458
HinfI	GANTC	5 cut(s)	131, 372, 556, 671, 677
HpaII	CCGG	7 cut(s)	29, 53, 113, 423, 530, 572, 698
HphI	GGTGA	2 cut(s)	18, 97
Hpy166II	GTNNAC	3 cut(s)	956, 1004, 1180
Hpy188I	TCNGA	9 cut(s)	78, 108, 179, 323, 561, 584, 676, 733, 1214
Hpy188III	TCNNGA	2 cut(s)	892, 1205
Hpy8I	GTNNAC	3 cut(s)	956, 1004, 1180
Hpy99I	CGWCG	4 cut(s)	17, 61, 172, 223
HpyAV	CCTTC	3 cut(s)	289, 628, 1022
HpyCH4III	ACNGT	4 cut(s)	74, 85, 91, 382
HpyCH4V	TGCA	9 cut(s)	22, 363, 631, 809, 817, 874, 883, 1103, 1109
HpyF3I	CTNAG	9 cut(s)	105, 263, 486, 543, 645, 732, 773, 1160, 1186
Hsp92I	GRCGYC	2 cut(s)	56, 477
Hsp92II	CATG	7 cut(s)	800, 895, 929, 967, 1052, 1060, 1124
HspAI	GCGC	4 cut(s)	125, 161, 216, 477
KasI	GGCGCC	1 cut(s)	476
KpnI	GGTACC	2 cut(s)	256, 495
Ksp22I	TGATCA	1 cut(s)	463
Kzo9I	GATC	4 cut(s)	47, 231, 463, 655
LmnI	GCTCC	3 cut(s)	42, 207, 259
Lsp1109I	GCAGC	9 cut(s)	150, 195, 615, 634, 637, 801, 829, 928, 1121
LweI	GCATC	1 cut(s)	9
MaeI	CTAG	1 cut(s)	158
MaeIII	GTNAC	2 cut(s)	85, 1151
MalI	GATC	4 cut(s)	49, 233, 465, 657
MbiI	CCGCTC	1 cut(s)	45
MboI	GATC	4 cut(s)	47, 231, 463, 655
MboII	GAAGA	8 cut(s)	397, 400, 424, 672, 751, 907, 1216, 1219
MflI	RGATCY	2 cut(s)	47, 655
MhlI	GDGCHC	2 cut(s)	1048, 1166
MlsI	TGGCCA	1 cut(s)	1061
MluCI	AATT	1 cut(s)	1010
MluNI	TGGCCA	1 cut(s)	1061
Mly113I	GGCGCC	1 cut(s)	477
MlyI	GAGTC	1 cut(s)	140
MmeI	TCCRAC	4 cut(s)	56, 381, 846, 1237
Mox20I	TGGCCA	1 cut(s)	1061
Mph1103I	ATGCAT	1 cut(s)	24
MscI	TGGCCA	1 cut(s)	1061
MseI	TTAA	1 cut(s)	1258
Msp20I	TGGCCA	1 cut(s)	1061
MspA1I	CMGCKG	3 cut(s)	186, 628, 904
MspI	CCGG	7 cut(s)	29, 53, 113, 423, 530, 572, 698
MspR9I	CCNGG	3 cut(s)	257, 498, 531
Mva1269I	GAATGC	4 cut(s)	22, 573, 885, 949
MvaI	CCWGG	2 cut(s)	257, 498
MvnI	CGCG	1 cut(s)	218
NarI	GGCGCC	1 cut(s)	477
NciI	CCSGG	1 cut(s)	531
NdeII	GATC	4 cut(s)	47, 231, 463, 655
NlaIII	CATG	7 cut(s)	800, 895, 929, 967, 1052, 1060, 1124
NlaIV	GGNNCC	6 cut(s)	99, 254, 275, 478, 493, 581
NmeAIII	GCCGAG	4 cut(s)	87, 459, 771, 826
NmuCI	GTSAC	1 cut(s)	85
NsiI	ATGCAT	1 cut(s)	24
NspI	RCATGY	1 cut(s)	800
NspV	TTCGAA	1 cut(s)	453
PaeI	GCATGC	1 cut(s)	800
PagI	TCATGA	1 cut(s)	891
PaqCI	CACCTGC	1 cut(s)	811
PceI	AGGCCT	2 cut(s)	1038, 1239
PcsI	WCGNNNNNNNCGW	1 cut(s)	65
PctI	GAATGC	4 cut(s)	22, 573, 885, 949
PfeI	GAWTC	4 cut(s)	372, 556, 671, 677
PinAI	ACCGGT	1 cut(s)	28
PleI	GAGTC	1 cut(s)	139
PluTI	GGCGCC	1 cut(s)	480
PpsI	GAGTC	1 cut(s)	139
Psp124BI	GAGCTC	1 cut(s)	1166
Psp6I	CCWGG	2 cut(s)	255, 496
PspFI	CCCAGC	1 cut(s)	900
PspGI	CCWGG	2 cut(s)	255, 496
PspN4I	GGNNCC	6 cut(s)	99, 254, 275, 478, 493, 581
PspPI	GGNCC	3 cut(s)	431, 444, 580
PsrI	GAACNNNNNNTAC	2 cut(s)	484, 516
PstI	CTGCAG	2 cut(s)	633, 819
PstNI	CAGNNNCTG	1 cut(s)	628
PsuI	RGATCY	2 cut(s)	47, 655
PvuII	CAGCTG	2 cut(s)	628, 904
RsaI	GTAC	2 cut(s)	254, 493
RsaNI	GTAC	2 cut(s)	253, 492
SacI	GAGCTC	1 cut(s)	1166
SaqAI	TTAA	1 cut(s)	1258
Sau3AI	GATC	4 cut(s)	47, 231, 463, 655
Sau96I	GGNCC	3 cut(s)	431, 444, 580
SchI	GAGTC	1 cut(s)	140
ScrFI	CCNGG	3 cut(s)	257, 498, 531
SduI	GDGCHC	2 cut(s)	1048, 1166
SfaNI	GCATC	1 cut(s)	9
SfcI	CTRYAG	2 cut(s)	629, 815
SfoI	GGCGCC	1 cut(s)	478
SfuI	TTCGAA	1 cut(s)	453
SgrAI	CRCCGGYG	1 cut(s)	28
SinI	GGWCC	1 cut(s)	580
SmlI	CTYRAG	1 cut(s)	920
SmoI	CTYRAG	1 cut(s)	920
SphI	GCATGC	1 cut(s)	800
Sse9I	AATT	1 cut(s)	1010
SseBI	AGGCCT	2 cut(s)	1038, 1239
SspDI	GGCGCC	1 cut(s)	476
SspMI	CTAG	1 cut(s)	158
SstI	GAGCTC	1 cut(s)	1166
StuI	AGGCCT	2 cut(s)	1038, 1239
StyD4I	CCNGG	3 cut(s)	255, 496, 529
StyI	CCWWGG	1 cut(s)	1039
TaaI	ACNGT	4 cut(s)	74, 85, 91, 382
TaqI	TCGA	4 cut(s)	234, 375, 410, 453
TasI	AATT	1 cut(s)	1010
TauI	GCSGC	7 cut(s)	119, 122, 125, 139, 189, 529, 724
TfiI	GAWTC	4 cut(s)	372, 556, 671, 677
Tru1I	TTAA	1 cut(s)	1258
Tru9I	TTAA	1 cut(s)	1258
TscAI	CASTG	5 cut(s)	296, 365, 385, 487, 528
TseFI	GTSAC	1 cut(s)	85
TseI	GCWGC	9 cut(s)	163, 183, 622, 625, 628, 814, 817, 916, 1109
Tsp45I	GTSAC	1 cut(s)	85
TspDTI	ATGAA	3 cut(s)	863, 880, 908
TspGWI	ACGGA	1 cut(s)	90
TspRI	CASTG	5 cut(s)	296, 365, 385, 487, 528
VpaK11BI	GGWCC	1 cut(s)	580
XceI	RCATGY	1 cut(s)	800
XspI	CTAG	1 cut(s)	158
Zsp2I	ATGCAT	1 cut(s)	24

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.