Prupe.3G070500_v2.0.a1

Ras-related protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
5065146 .. 5068074
2929 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G070500.1

Sequence Viewer

Length: 606 bp
ATGGCCAGGCCTGGCAACAAGATCATACAAGCCAAACTGGTGCTTCTAGGGGACATGGGAACTGGAAAAACCAGCTTGGTATTAAGATTTGTCAAAGGCCAGTTTTTTGATCACCAGGAACCAACAATAGGAGCAGCTTTTTTCACTCAGATACTGTCGTTAAGTGAAGCCACTGTGAAGTTTGATATATGGGACACAGCAGGACAAGAACGGTATCATAGCTTAGCTCCTATGTACTATCGTGGTGCAGCAGCCGCTGTAGTCGTGTATGACATCTCAAGCACGGATACGTTCACTCGAGCCAAAAAATGGGTTCAAGAATTGCAAAGGCAAGGGAATTTAAGCTTAGTGATGGCGTTGGTGGCAAATAAGTGCGACTTGGAGGCGAAAAGAGAGGTCGAGAATGAGGAAGGGGAGCAATTTGCTCAAGACAACGGGATGTTTTTCTTGGAAACATCAGCCAAAACTGCACAGAATATCAATGAGCTATTCCATGAAATAGGTAACTTTCAGAATTATTATCTGAAGATAAAATCTGGTTCGGTTACAACATTGCCTAAGGATAGCAGGGTCATCACAAGGGAAATTTACTGTTTCAAACATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

202

Amino Acids

22.7

Weight (kDa)

6.91

Isoelectric Point (pI)

30.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0014770)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 309
AciI CCGC 1 cut(s) 255
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 337, 585
AcuI CTGAAG 1 cut(s) 545
AfaI GTAC 1 cut(s) 236
AfiI CCNNNNNNNGG 2 cut(s) 128, 309
AgsI TTSAA 2 cut(s) 317, 598
AjnI CCWGG 3 cut(s) 5, 10, 114
AluBI AGCT 6 cut(s) 75, 137, 222, 227, 345, 487
AluI AGCT 6 cut(s) 75, 137, 222, 227, 345, 487
AlwNI CAGNNNCTG 2 cut(s) 154, 257
Ama87I CYCGRG 1 cut(s) 297
AoxI GGCC 3 cut(s) 3, 8, 97
ApeKI GCWGC 3 cut(s) 134, 248, 251
ApoI RAATTY 2 cut(s) 337, 585
AsuHPI GGTGA 1 cut(s) 104
AvaI CYCGRG 1 cut(s) 297
AxyI CCTNAGG 1 cut(s) 558
BaeI ACNNNNGTAYC 2 cut(s) 143, 176
BalI TGGCCA 1 cut(s) 5
BbvI GCAGC 3 cut(s) 146, 260, 263
BccI CCATC 1 cut(s) 346
BciT130I CCWGG 3 cut(s) 7, 12, 116
BciVI GTATCC 1 cut(s) 280
BclI TGATCA 1 cut(s) 109
BfaI CTAG 1 cut(s) 47
BfmI CTRYAG 1 cut(s) 258
BfuI GTATCC 1 cut(s) 280
BisI GCNGC 4 cut(s) 135, 249, 252, 255
BlpI GCTNAGC 1 cut(s) 223
BlsI GCNGC 4 cut(s) 136, 250, 253, 256
Bme1390I CCNGG 3 cut(s) 7, 12, 116
BmeT110I CYCGRG 1 cut(s) 297
BmiI GGNNCC 1 cut(s) 120
BmrFI CCNGG 3 cut(s) 7, 12, 116
Bpu1102I GCTNAGC 1 cut(s) 223
BpuEI CTTGAG 2 cut(s) 262, 411
Bsc4I CCNNNNNNNGG 2 cut(s) 128, 309
Bse1I ACTGG 3 cut(s) 42, 67, 100
Bse21I CCTNAGG 1 cut(s) 558
Bse3DI GCAATG 1 cut(s) 551
BseBI CCWGG 3 cut(s) 7, 12, 116
BseGI GGATG 1 cut(s) 444
BseLI CCNNNNNNNGG 2 cut(s) 128, 309
BseMI GCAATG 1 cut(s) 551
BseMII CTCAG 1 cut(s) 161
BseNI ACTGG 3 cut(s) 42, 67, 100
BseXI GCAGC 3 cut(s) 146, 260, 263
BsgI GTGCAG 2 cut(s) 267, 453
BshFI GGCC 3 cut(s) 5, 10, 99
BsiHKCI CYCGRG 1 cut(s) 297
BslFI GGGAC 2 cut(s) 65, 206
BslI CCNNNNNNNGG 2 cut(s) 128, 309
BsmFI GGGAC 2 cut(s) 65, 206
BsnI GGCC 3 cut(s) 5, 10, 99
BsoBI CYCGRG 1 cut(s) 297
Bsp143I GATC 2 cut(s) 21, 109
Bsp1720I GCTNAGC 1 cut(s) 223
BspACI CCGC 1 cut(s) 255
BspANI GGCC 3 cut(s) 5, 10, 99
BspCNI CTCAG 1 cut(s) 160
BspLI GGNNCC 1 cut(s) 120
BsrDI GCAATG 1 cut(s) 551
BsrI ACTGG 3 cut(s) 42, 67, 100
BssMI GATC 2 cut(s) 21, 109
Bst2UI CCWGG 3 cut(s) 7, 12, 116
Bst4CI ACNGT 4 cut(s) 156, 175, 213, 593
BstDEI CTNAG 4 cut(s) 147, 223, 346, 558
BstF5I GGATG 1 cut(s) 444
BstKTI GATC 2 cut(s) 24, 112
BstMBI GATC 2 cut(s) 21, 109
BstMWI GCNNNNNNNGC 3 cut(s) 254, 362, 467
BstNI CCWGG 3 cut(s) 7, 12, 116
BstSCI CCNGG 3 cut(s) 5, 10, 114
BstSFI CTRYAG 1 cut(s) 258
BstV1I GCAGC 3 cut(s) 146, 260, 263
Bsu36I CCTNAGG 1 cut(s) 558
BsuI GTATCC 1 cut(s) 280
BsuRI GGCC 3 cut(s) 5, 10, 99
BtsCI GGATG 1 cut(s) 444
BtsIMutI CAGTG 1 cut(s) 171
CaiI CAGNNNCTG 2 cut(s) 154, 257
Csp6I GTAC 1 cut(s) 235
CviAII CATG 2 cut(s) 55, 494
CviQI GTAC 1 cut(s) 235
DdeI CTNAG 4 cut(s) 147, 223, 346, 558
DpnI GATC 2 cut(s) 23, 111
DpnII GATC 2 cut(s) 21, 109
EaeI YGGCCR 1 cut(s) 3
Eco147I AGGCCT 1 cut(s) 10
Eco57I CTGAAG 1 cut(s) 545
Eco81I CCTNAGG 1 cut(s) 558
Eco88I CYCGRG 1 cut(s) 297
EcoRII CCWGG 3 cut(s) 5, 10, 114
FaeI CATG 2 cut(s) 58, 497
FaiI YATR 8 cut(s) 26, 56, 188, 190, 219, 233, 270, 495
FalI AAGNNNNNCTT 2 cut(s) 362, 394
FaqI GGGAC 2 cut(s) 65, 206
FatI CATG 2 cut(s) 54, 493
FbaI TGATCA 1 cut(s) 109
Fnu4HI GCNGC 4 cut(s) 135, 249, 252, 255
FokI GGATG 1 cut(s) 451
Fsp4HI GCNGC 4 cut(s) 135, 249, 252, 255
FspBI CTAG 1 cut(s) 47
GluI GCNGC 4 cut(s) 135, 249, 252, 255
HaeIII GGCC 3 cut(s) 5, 10, 99
Hin1II CATG 2 cut(s) 58, 497
HindIII AAGCTT 1 cut(s) 343
HphI GGTGA 1 cut(s) 104
Hpy166II GTNNAC 1 cut(s) 294
Hpy188I TCNGA 3 cut(s) 150, 513, 525
Hpy188III TCNNGA 3 cut(s) 317, 400, 428
Hpy8I GTNNAC 1 cut(s) 294
HpyAV CCTTC 1 cut(s) 404
HpyCH4III ACNGT 4 cut(s) 156, 175, 213, 593
HpyCH4IV ACGT 1 cut(s) 290
HpyCH4V TGCA 3 cut(s) 248, 325, 470
HpyF10VI GCNNNNNNNGC 3 cut(s) 254, 362, 467
HpyF3I CTNAG 4 cut(s) 147, 223, 346, 558
HpySE526I ACGT 1 cut(s) 290
Hsp92II CATG 2 cut(s) 58, 497
Ksp22I TGATCA 1 cut(s) 109
Kzo9I GATC 2 cut(s) 21, 109
LmnI GCTCC 3 cut(s) 131, 232, 415
Lsp1109I GCAGC 3 cut(s) 146, 260, 263
MaeI CTAG 1 cut(s) 47
MaeII ACGT 1 cut(s) 290
MaeIII GTNAC 2 cut(s) 503, 544
MalI GATC 2 cut(s) 23, 111
MboI GATC 2 cut(s) 21, 109
MboII GAAGA 1 cut(s) 538
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 5 cut(s) 320, 337, 419, 514, 585
MluNI TGGCCA 1 cut(s) 5
MnlI CCTC 3 cut(s) 376, 388, 400
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 83, 161, 341
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 257
MspR9I CCNGG 3 cut(s) 7, 12, 116
MvaI CCWGG 3 cut(s) 7, 12, 116
MwoI GCNNNNNNNGC 3 cut(s) 254, 362, 467
NdeII GATC 2 cut(s) 21, 109
NlaIII CATG 2 cut(s) 58, 497
NlaIV GGNNCC 1 cut(s) 120
PaeR7I CTCGAG 1 cut(s) 297
PceI AGGCCT 1 cut(s) 10
PflMI CCANNNNNTGG 1 cut(s) 309
PkrI GCNGC 4 cut(s) 136, 250, 253, 256
Psp6I CCWGG 3 cut(s) 5, 10, 114
PspGI CCWGG 3 cut(s) 5, 10, 114
PspN4I GGNNCC 1 cut(s) 120
PspXI VCTCGAGB 1 cut(s) 297
PstNI CAGNNNCTG 2 cut(s) 154, 257
RsaI GTAC 1 cut(s) 236
RsaNI GTAC 1 cut(s) 235
SaqAI TTAA 3 cut(s) 83, 161, 341
SatI GCNGC 4 cut(s) 135, 249, 252, 255
Sau3AI GATC 2 cut(s) 21, 109
ScrFI CCNGG 3 cut(s) 7, 12, 116
SetI ASST 9 cut(s) 77, 139, 224, 229, 293, 347, 399, 489, 505
SfcI CTRYAG 1 cut(s) 258
Sfr274I CTCGAG 1 cut(s) 297
SlaI CTCGAG 1 cut(s) 297
SmlI CTYRAG 3 cut(s) 277, 297, 426
SmoI CTYRAG 3 cut(s) 277, 297, 426
Sse9I AATT 5 cut(s) 320, 337, 419, 514, 585
SseBI AGGCCT 1 cut(s) 10
SsiI CCGC 1 cut(s) 255
SspMI CTAG 1 cut(s) 47
StuI AGGCCT 1 cut(s) 10
StyD4I CCNGG 3 cut(s) 5, 10, 114
TaaI ACNGT 4 cut(s) 156, 175, 213, 593
TaiI ACGT 1 cut(s) 293
TaqI TCGA 2 cut(s) 298, 399
TasI AATT 5 cut(s) 320, 337, 419, 514, 585
TatI WGTACW 1 cut(s) 234
TauI GCSGC 1 cut(s) 257
Tru1I TTAA 3 cut(s) 83, 161, 341
Tru9I TTAA 3 cut(s) 83, 161, 341
TscAI CASTG 1 cut(s) 178
TseI GCWGC 3 cut(s) 134, 248, 251
TspDTI ATGAA 1 cut(s) 510
TspGWI ACGGA 1 cut(s) 299
TspRI CASTG 1 cut(s) 178
Van91I CCANNNNNTGG 1 cut(s) 309
XapI RAATTY 2 cut(s) 337, 585
XhoI CTCGAG 1 cut(s) 297
XspI CTAG 1 cut(s) 47
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.