Prupe.3G077100_v2.0.a1

Small subunit processome component 20 homolog

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
5666627 .. 5684584
17958 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G077100.1

Sequence Viewer

Length: 8178 bp
ATGGCAACCCTATCACAAGCTCAGGCCGTCAAGTCGCTCAACAAATCCCCCGGACGCCGCCGTTTTGTCTTCAAGAGCTTCTCTCAGAGACTAGAAGAAGTTGAAATTGATGTATTCCGAAGCCTTGATAAAGTTAAATCAGAGCCGCAAGCGGGCTCTACGTTTTTCCGGGACTGCCTCGTAGAATGGAGAGAATTGAACACGGCTGAGGATTTCATCGCTTTCTATGAGCAAATGACGCCATTGGTCCAAACATTGCCTTTGGTGTTGTTGCACAAGGAAACCATAATCTCAGAACTCCTTTCTAGATTACAGATGAAGGCAAGGTTGTCGCTTGAGCCCATTCTCAGGTTAATTGCAGCCCTGTCTAGAGATCTCCTAGAGGACTTTATCCCCTTCTTGCCAAGGATTGCTGACTCTCTAGTGTGTCTCCTAGAAAGTGGTGCTGATAGGGAGCCAGAGACCATTGAGCAGATCTTTACATCATGGTCATCTATTATGATGTACTTGCAAAAATATCTTGTACAAAAGCTTGTGCATGTTCTAAAGGTTACTGTAAAATTGAGATATTATCCAAAAGATTACATCCAAGAATTTATGGCAGAGGGGATGTCATTCTTGCTGAGAAATGCACCTTTTGAGCAGCTTAAAGAAGGTGTCAAAAAGGTCATGTTTGAAGTTGTGAAGAAATCAATACCTGTCAGAAAATGTGGAGTCAGTGCTTTACTATATTTTGTCATGCGAGGGACCTCATCAAGGTTCCATTCTAAAGCCGAGCAAGTGTTGCATTTATTGATGGACGACTTGATACTTGGTATTGGTGAAAATTTCAGCAAAGGTTCAGACACTGTTGTTGAAGTCTTAATTTCTGCATTACAAAGATTATGTGATGACTTGGACTCCAAGGAGTTGAACTTAATGTTCAATATCTTATATCAGGAAATAACTGACTGTGTGATTAATGGAGGTGTTGAACGTTTAAGCCGCCTGTTGTTATTGCTTGTTTCTACCATTCAAGTTAAGAATGGCCAAAGGGTTTCCGATTACCAACAAATGCTTGAAATTGTGGGTTTGCTTGTGCGGACATTTATCATGCCTTCTGGCATTACAATGGCAAAGGAACATTCATCTGATGTTGTGGATAAGGTTTTGCAGCTAATGCTCAGTATTCTTAGTGGACTGCACAGTTACAATGATATGTCAACCATATCTAGTTGTTCATTGCAATGGGCTCCTGTCTTTGATCTAAAGAACTCAAGTTTGTTAGGTTTTATTCGACAACTATTACAAAAGGATGTTTGCGTACTAGATATCTTTAGAGTTAACATTTTAAGGGCCATGAATGATTTAATAGAAACTTCACAGGAAGATGTAATTTATTTGTTACTCACCTTCAATGAAAAACTACAAATGGAAACCCAAAGCTTGACCTTCTTAGATAGAACACGTGAAGGAGTTCCAAGGATTCAAGGTTTTATGCGTGGGGCTATCAGCAATTGGGTTGGGGTTTTAAAGGGTATTGTAGATGGGGATTCGTCATCCACTTTAATTCATGAAGCTGACTTGGCCCAGCTGTGGGGTGTCATTAACTGCTTTCCACAAATAGCAGAATCCGAAGAAGATTTTTCATTGTTGATGGATTTGATAGATGCAGATGATCAAATTCTGATGATTGAAGCTGACAATATTGCAGGTTTTCCTAAACACACTTGGGAGAGCTTAATTGGTGCTACCTTAAATTCCTATTACAAACTTACTCGTGGTAAAAATTCTGAGCTTGACGAAACAAGCAGATTTTTGCATCTTGGAAAAAGACACAAATCATGTCTACAAGTGTTGGTTGCTGTTGCTGATTTTTTGGATTCCGTGTATGGGCCTATTGTGGAAGGAGACACCAAGTCTAGAACTTATCATCCAGAACTACAAGCAGATAAAGCCATAGATGCTTTGGACATATTTGCTGATAATTTGTTCCATTCAGACAGAGGGATTCGTGCTTCAACTCTTAGAATATTGTGCCACTATGAAACTCTAAATTGCAATATTTGCACAGAGGATGAGCCAGTTGTGAAGAAAATGAGAACTGAAGTTTCTCCTACTTGTCATGTGGATAATCAAGGCTTTAACGTTCTTCCGCTCCTCCTCTCAATCGAGTCAACTCCGCTTTCAATTTCTACCAGTAGGAAAGTTACTCTATTGATTTCTAGAATACAGATGGGCCTCTCCACTGGAAGAATAGCTGAAGCTTATCTGCCCCTTATTTTGAATGGGATGATTGGTATCTTCCATAACCGGTTTAGTTATCTTTGGAATCCTACATCAGAGTGTCTTGCAGTTCTGATTAGCCAAAATACTGGACTTGTATGGGAGAGATTTGTTCATTATTTTGAACAATGCCTATCGAGATTTCAAGTGTCTTTTGATCAAGTTGATGAAGTAAATTCTAAGTTGACTAACAAGTCAAGTGATTTGGTTGAAGGCTTTAATTTGTGTTTTACTTCCAAGTCTGATAGTACGCCTTCTGCAGCAGTATTATCTTCTTTGCTTCAGTCTTTACAAAGAATTCCAACTATAATTGAATCTAAGTCTCGTCAGATTCTACCTTTGTTTTTAAAGTTTCTGGGCTACAATTGCAAGGACTTTAAAAGCATCGGGTCTTTCAATCCGAGTGTTTGTAAAGGCAAAGAGTGGAAAGGTGTCCTCAAAGAATGGTTAAACCTGCTGAAACTGATGCACAACCTTAAGTCCTTCTATCAGAATCAGTTTCTTAAAGAGGTCTTACAAAATAGGCTTTTGGATGAAAATGATGCTGAAATACAGACGAAGGTTCTTGATTGCCTGTTAATCTGGAAAGATGATTTCCTGCTCCCATATAGTCAACGATTGAAAAACCTAGCCAGCTTCCATAATTTGAGAGAAGAATTAACAACATGGAGTTTATCCAGAGAGTCTAATCTAATTGAAGAAGAGCACAGACCTGACCTTGTGCCTATGGTTATCCGTCTTCTGATGCCCAAAGTTCGCAAATTGAAGAAACATGCTTCTCAGAAGCTTTCAAGAGTAAATCATCGGAAGGCAGTTCTTGGTTTCATAGCTCAAGTTGAAGTTGAAAAGCTTCCTCTTTTCTTTGTGCTGTTAATAAAGCCCTTGCAAATTGTTTCAATGGGAAGTGACGGTGCTGCAAGCTGGTTTTGGACCTTGCCAAACAGTTCTTTGGCTGAATTTCAAGCATTGGATTTCTTAAAATATTTCACTTTGAGCAATATATCAGCCCTATCTTGGAAGAAAAGATCTGGTTTTCTGCATGTGATTGAAGATATCCTTGGAGTTTTTGATGCATCACGTGTTGGTCCCTTTCTTGATTTTCTAATGGGGTGTGTCGTTCGGATATTAGGAAGCTGCAGTTTAGGTCTTGATGTGGCAAAAGGCAATGGATCTTCAGTTGAAAATTATCCGGATGTGGACCTTACTTTGCTTGGAAAAGATAGTGCAGTGGAAAATAATGTTCTGATCTCCACAACTTTGAGGCAGTTCAAGGATTTGAGGTCTTTATGTCTGAAAATTGTATCCTTTGTTCTCAATAAGTATGAAGATCATGAATTTAGTTGCGAGTTCTGGGACCTATTCTTCATGTCAGTCAAGCCTTTAATTGACGGTTTCAAGCAGGAGGGACCCAGCGGCCAGAAACCTAGTTCACTATTCTCTTGTTTTCTTGCTCTGTCTAGAAGCCAAAAACTTGTACCACTACTGTATAGGGAACAAAAACTTGTTCCTGATATACTCTCAATTCTAACCGTCACGTCAGCATCTGAAGCTATTATATCTTGTGTTCTTAAGTTTGTCGAGAACCTTTTGAATCTTGATCACGAGTTGGATGATGAAGATAGTGCTGTAAAAAGAGTTATACTCCCGAACCTTGAAGCACTTATTGATAGCCTGCATAGTCTTTTTCACAGTAATAATGCTGCCAAGAGGAAATTGTTTAAACGCCCAGGAGACACAGAAACAAGAATTTTCAAATTTTTACCAAAGTATATAAAGAGTACAGTGCCAGCCAGGAAATTTGTGGATATATTGCTTCCAGTTTTAGCAAATGGAACTCAAAATTCAGATTTTTGTTTTGAAGTGGTGCAAGTAATTCGTGATATTGTTCCAGTATTGGGGAGTGAGATTACAAATAAAATTCTTACTGCAGTATCTCCACTACTTACTTCTACTGATCTAGATAAACGTGTTTTTATCTGTGATCTTCTGGATGCTGTTGCTAGAGTAGACCCTTCAATTCACTTTGTGGCAAAACTTGTCCAGGACTTGAATGCAACCTCTAATACGGAATTGGGTAGCCTGGATTATGACAATGTTGTCAATGCTTATGAAAAGATCAGTGTTGATATCTTCTATACAATTCGAGAGGATCATGCATTGGTCATTTTGTCTCATTGTGTCTATGACATGTCATCTGAAGAATTAATCTTGAGGCACAGTGCTTACAAGTCATTGCGTTCATTTGTTGAATTTGCTGCCCTAATACTTGGTCAAGTAGTGAACAACCACTGTGAAATGCCTGATATGCCTGACAAGATGTTGGCCTCAGATGATTGTTATTGGACAAGAGCGTGCATTCAGAGAATAACAAGCAAGTTTCTTTTGAACCATATGGGTAATGCTTTGAAGAGAGGAACTTCTATTAGAAAGGAATGGGTTGATTTACTAAGAGAAATGGTGTTAAAACTCCCAGAAGTGGCAAATCTGGGTTCATTGAAGGCTCTTTGCGATGAAGATGCTGAAATAGATTTTTTCAACAATATCGTTCACTTACAGAAACATAGGAGAGCAAGGGCACTGTCACGCTTTAGGAATGTTATCAGCTCCAGCTATATGCCAGAGGGCATCACAAAGAAAGTGTTTGTACCCCTCTTTTTCAATATGTTGCTGGAGGAGCATGAAGGAAAAGGTGAACATGTAAAAAATGTCTGCATAGAGGCCCTTGCTTCAATTTCCTGTCACATGGAATGGAATTCATACTACTCATTGTTGATGAGATGCTTTAATGAGATGATCAAGAATCCTAATAAACAAAAGCTCCTTCTGCGGCTCATCTGTTCTGTTTTGGACCAGTTTCACTTTTCAGATGCCAAAGACTCTTTGGATAATGTTTCCAACACAGGGACCACTGATTCTGGCACTTCAATCTTGCGTAGATGCAGTACTGTTTCGGCAAATGAAATACAGACATGCCTTCAAAAAGTTGTGCTTCCTAAGATACATAAGTTACTCAGTGATTCTGAGAAGGTCAATGCTAACATCAATCTTGCTGCACTGAGAGTATTAAGGTTGCTCCCGGGAGATGTAATGGACTCGCAGCTTCCTAGCATTGTTCATCGAATTTCAAATTTTTTGAAGAATCGATTAGAAAGCATCCGTGAAGAAGCTAGGTCCGCTTTGGCCGCTTGTTTGAAGGAGCTGGGGCTGGAATACTTACATTTTATAGTCAAGGTTTTGCGAAGTACATTGAAACGGGGATATGAGTTACATGTGTTGGGATACACACTGAACTTTATTTTGTCAAAGTTTCTTGTCACTCCAATTAGTGGGAAATTGGACTACTGTTTGGAAGATCTCCTTTATATTGTACAGAATGACATTCTTGGAGATGTTGCTGAGGAAAAAGATGTTGAAAAGATTGCTTCCAAGATGAAAGAAACTAAGAAGCAGAAGTCTTTTGAAACCCTGAGATTGATTGCTCAAAGCATAACATTCAAAAGCCACGCCTTGAAACTTCTATCCCCTGTTACTGCTCAATTTGAGAAACATTTGACACCAAAAACCAAGACAAAATTGGAAAGTATGTTAACTCACATAGCGGCTGGTATTGAATACAATCCAACTGTTGATCAGACTGACCTATTTATATTTGTATATGGTCTGATTGAAGATGGAATAAATGAAGAAAATGGCCAGGGTGAGAATTTGTTCATTACACGGTTAAATGGACGCCGTCGAAATGATATGACTGGAAAAGCTGTTTCGTCAGGCTGTGTTGCAGGTGCTAAATCAGTATGTTCACATCTTATTTCAGTGTTTGCTCTTGGGATATTTCAGAAGCGCATAAAGAATTTGAAATTGGGACATAACGATGCACAAATGTTGTCAATGTTAGATCCGTTCGTCTTACTGTTAGGGAAGTGTTTGAACTCCAAGTATGAAGATGTCGTATCTGCATCACTTAGATGCCTCACCCCACTTGTCAGGTTGCCTTTGCCTGCCATCGAATCTCAGGCAGATAATATTAAAGCTGCACTGTTTGGTATTGCTGAAAGTTCAGTTAATACTGGCAGCTCTCTAATGCAGTCATGTCTGAGGTTGTTGACTGTACTTTTGCGTGGCACCAAAATCACGCTGTCATCTGATCAGCTACATCTGTTGATTCAGCTTCCACTGTTTGTTGATCTTGAGAAGAATCCCTCCTTTGTTGCTCTTTCACTTCTAAAGGCAATTGTTAACCGCAAGCTAGTTGTTCCCGAGATATATGATCTTGTAACTAGAGTTGCAGAATTGATGGTAACAAGCCAAGTAGAACCAATTCGTCACAAATGTAGCAAGATTCTATTGCAATTCTTACTTGATTATCGTCTCTCTGAAAAACGCTTGCAACAGCATTTAGATTTTCTACTGTCAAATCTGAGGTATGAGCATTCGAGTGGAAGAAAATCCGTGCTTGACATGCTCCACACAATTATTGTTAAATTTCCAAAAGGCGTTGTAGATGAGCAATCCCAGACTTTTTTTGTCCATTTGGTGGTTTGCTTGGCTAATGATCAAGATAATGAAGTTCGTTCCTTGGCTGGTGCAGCTATAAAATGTCTCACCGGCTATATAAGCCTACATTCATTTCGTTCCATTCTTGAGTACAGCCTATCTTGGTATTTGGGTGCGAAGCAACAACTGTGGAGTGCTGCAGCACAGGTTTTGGGATTACTGGTTGAAGTCATGGAGAAAGGATTTCACAAGCATATCAACAAAATATTGCCAGTTGCAGTCATGGAGAAAGAATTTCATAAGCATATCAACAGAATATTACCAGTGACTAAATGTATCTTACAGTCTACCATCAATGTAGTCACTGATGGGAAACTAGATTTTTCTAATGAAACTAACATTCCTTTATGGAAGGAGGCTTATTATTCGTTAGTGATGCTGGAGAAAATGCTGCATCAGTTCCAGGGTCTATGCTTTGATAGGGATCTTGAGGATATATGGGAAGCAATTTGTGAATTACTGCTGCATCCACACATGTGGTTACGTTGCATTTCCAGTCGCCTTGTAGCTTTCTACTTTGCTGCTGTCACAGAGGCATGCTCTAAAAATCATGAAAAACTATGTGGGGCTTACTATCTTATTAGACCAAGTAGACTTTTCATGATAGCTGTTTATCTCTGCTGCCAAATGAAGACACAGCTTGTTGATGATACTGCCAGTAATCTGATTACACAAAATCTTGTGTCCACTATTTGTGGGGTGCATTCGTTGGTGGGACAAACAGAGTGTGCAGATCCCACCCAGTTCTGGTCCACCCTTGAAGAGCATGAGCAGGGCTGTTTTCTTAAAGCTTTTGAGTTGCTCGATGCTAGAAAAGGAAGGATCATGTTTTTATCTCTTACCTCTGGAATATGCGACAAAAATAATGAAAGCCCCTCTAAGAATATTCGGTACTTGCTTGTCTCCAGCCTGCTCAAAAAAATGGGAAAAATTGCCCTTCAAATGGAGGCTATTCAGATGAAAATTGTCTTTGATAGTTTTGGAAAAATTTCATCCGAAATAAGTCAGGAAGACTGCCTGCTTCATGCCTCTGAAATCTTGTTGCCCTTGTATAAAGTTTGCGAAGGATTTTCTGGGAGAGTGATTCCTGAAAATATGAAGCAATTAGCGCAAGAAATTTCTGAACGTGTACGAAATAAACTAGGCGTACAAAATTATGTACTGGTTTACAATGACATCCGGAAGAATCTCAAGGCAAAGAGGGATAAGAGGAAACATGAAGAAAAGCGCATGGCTGTTACCGATCCTATGCGAAATGCAAAGAGAAAGTTGAGGATTGCGGAGAAGCATCGTGCCAACAAGAAAAGGAAGATGATGACAATGAAAATGGGGAGATGGACGCATTCCAAGTCAAAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

2726

Amino Acids

309.23

Weight (kDa)

8.13

Isoelectric Point (pI)

42.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 6035
AasI GACNNNNNNGTC 2 cut(s) 2458, 4361
Acc36I ACCTGC 3 cut(s) 1682, 2727, 6035
AccB1I GGYRCC 1 cut(s) 6386
AccB7I CCANNNNNTGG 2 cut(s) 5591, 6799
AccBSI CCGCTC 1 cut(s) 2137
AccI GTMKAC 4 cut(s) 1828, 4272, 7106, 7411
AccIII TCCGGA 2 cut(s) 3454, 7998
AclI AACGTT 2 cut(s) 976, 2127
AclWI GGATC 7 cut(s) 3442, 4422, 6155, 7251, 7547, 7649, 8057
AcoI YGGCCR 4 cut(s) 1027, 3679, 5445, 5956
AcuI CTGAAG 6 cut(s) 2106, 2262, 2531, 3423, 3831, 4482
AcvI CACGTG 2 cut(s) 1448, 3344
AcyI GRCGYC 3 cut(s) 55, 239, 5995
AdeI CACNNNGTG 1 cut(s) 4291
AflII CTTAAG 2 cut(s) 2741, 3833
AflIII ACRYGT 8 cut(s) 1445, 3343, 4231, 4452, 4960, 5533, 7293, 7945
AgeI ACCGGT 1 cut(s) 2292
AhdI GACNNNNNGTC 1 cut(s) 1897
AjiI CACGTC 1 cut(s) 3801
AjnI CCWGG 6 cut(s) 3991, 4055, 4305, 4344, 5958, 7221
AjuI GAANNNNNNNTTGG 4 cut(s) 3306, 3338, 6107, 6139
AleI CACNNNNGTG 1 cut(s) 7294
AloI GAACNNNNNNTCC 2 cut(s) 1897, 1929
Alw21I GWGCWC 1 cut(s) 2973
AlwI GGATC 7 cut(s) 3442, 4422, 6155, 7251, 7547, 7649, 8057
AlwNI CAGNNNCTG 2 cut(s) 848, 3809
Ama87I CYCGRG 2 cut(s) 5341, 6521
Aor13HI TCCGGA 2 cut(s) 3454, 7998
ArsI GACNNNNNNTTYG 2 cut(s) 6361, 6393
AseI ATTAAT 2 cut(s) 960, 4469
AsiGI ACCGGT 1 cut(s) 2292
Asp700I GAANNNNTTC 5 cut(s) 1455, 3114, 5972, 6582, 7807
AspLEI GCGC 3 cut(s) 6108, 7930, 8049
AsuC2I CCSGG 4 cut(s) 51, 170, 5342, 5343
AsuHPI GGTGA 6 cut(s) 833, 1381, 4967, 5975, 6229, 6859
AvaI CYCGRG 2 cut(s) 5341, 6521
BaeGI GKGCMC 1 cut(s) 4843
BaeI ACNNNNGTAYC 4 cut(s) 4179, 4212, 5255, 5288
BalI TGGCCA 2 cut(s) 1029, 5958
BanI GGYRCC 1 cut(s) 6386
BanII GRGCYC 3 cut(s) 158, 342, 1234
BauI CACGAG 2 cut(s) 1758, 3866
BbrPI CACGTG 2 cut(s) 1448, 3344
BbsI GAAGAC 4 cut(s) 61, 2996, 7457, 7836
Bbv12I GWGCWC 1 cut(s) 2973
BbvCI CCTCAGC 2 cut(s) 207, 5661
BceAI ACGGC 4 cut(s) 11, 45, 219, 5982
BcgI CGANNNNNNTGC 6 cut(s) 312, 346, 4121, 4155, 4763, 4797
BciT130I CCWGG 6 cut(s) 3993, 4057, 4307, 4346, 5960, 7223
BciVI GTATCC 2 cut(s) 3577, 5537
BclI TGATCA 7 cut(s) 1657, 2422, 3862, 5058, 5893, 6409, 6817
BcnI CCSGG 4 cut(s) 51, 170, 5342, 5343
BfmI CTRYAG 4 cut(s) 2523, 3400, 4191, 6957
BfrI CTTAAG 2 cut(s) 2741, 3833
BfuAI ACCTGC 3 cut(s) 1682, 2727, 6035
BfuI GTATCC 2 cut(s) 3577, 5537
BglII AGATCT 4 cut(s) 373, 474, 3290, 5617
BmcAI AGTACT 1 cut(s) 5209
BmeRI GACNNNNNGTC 1 cut(s) 1897
BmeT110I CYCGRG 2 cut(s) 5341, 6521
BmgBI CACGTC 1 cut(s) 3801
BmrI ACTGGG 1 cut(s) 7555
BmuI ACTGGG 1 cut(s) 7555
BpiI GAAGAC 4 cut(s) 61, 2996, 7457, 7836
BplI GAGNNNNNCTC 6 cut(s) 67, 99, 3891, 3923, 7343, 7375
BpmI CTGGAG 4 cut(s) 4855, 4955, 7220, 7708
Bpu10I CCTNAGC 3 cut(s) 21, 207, 5661
BpuEI CTTGAG 8 cut(s) 356, 1240, 3081, 4495, 6473, 6926, 7268, 7994
BpuMI CCSGG 4 cut(s) 51, 170, 5342, 5343
Bsa29I ATCGAT 1 cut(s) 5407
BsaAI YACGTR 2 cut(s) 1448, 3344
BsaBI GATNNNNATC 2 cut(s) 2279, 7242
BsaHI GRCGYC 3 cut(s) 55, 239, 5995
BsaI GGTCTC 1 cut(s) 455
BsaWI WCCGGW 3 cut(s) 2292, 3454, 7998
BsaXI ACNNNNNCTCC 4 cut(s) 884, 914, 5067, 5097
Bse118I RCCGGY 2 cut(s) 2292, 6869
Bse3DI GCAATG 5 cut(s) 254, 1220, 1232, 3436, 4496
Bse8I GATNNNNATC 2 cut(s) 2279, 7242
BseAI TCCGGA 2 cut(s) 3454, 7998
BseBI CCWGG 6 cut(s) 3993, 4057, 4307, 4346, 5960, 7223
BseCI ATCGAT 1 cut(s) 5407
BseJI GATNNNNATC 2 cut(s) 2279, 7242
BseMI GCAATG 5 cut(s) 254, 1220, 1232, 3436, 4496
BseRI GAGGAG 3 cut(s) 2129, 2132, 4952
BseSI GKGCMC 1 cut(s) 4843
BseYI CCCAGC 3 cut(s) 1569, 3674, 5464
BsgI GTGCAG 6 cut(s) 1166, 3510, 5301, 6282, 6870, 7569
BshNI GGYRCC 1 cut(s) 6386
BshTI ACCGGT 1 cut(s) 2292
BshVI ATCGAT 1 cut(s) 5407
BsiHKAI GWGCWC 1 cut(s) 2973
BsiHKCI CYCGRG 2 cut(s) 5341, 6521
BsiSI CCGG 7 cut(s) 51, 169, 2293, 3455, 5342, 6870, 7999
BslFI GGGAC 8 cut(s) 185, 760, 3336, 3632, 3684, 5182, 6141, 7548
BsmBI CGTCTC 1 cut(s) 6638
BsmFI GGGAC 8 cut(s) 185, 760, 3336, 3632, 3684, 5182, 6141, 7548
BsmI GAATGC 5 cut(s) 4321, 4620, 6694, 7522, 8161
Bso31I GGTCTC 1 cut(s) 455
BsoBI CYCGRG 2 cut(s) 5341, 6521
Bsp1286I GDGCHC 5 cut(s) 158, 342, 1234, 2973, 4843
Bsp13I TCCGGA 2 cut(s) 3454, 7998
Bsp1407I TGTACA 2 cut(s) 523, 5632
BspDI ATCGAT 1 cut(s) 5407
BspEI TCCGGA 2 cut(s) 3454, 7998
BspHI TCATGA 4 cut(s) 1552, 3595, 7369, 7419
BspMAI CTGCAG 4 cut(s) 2527, 3404, 4195, 6961
BspMI ACCTGC 3 cut(s) 1682, 2727, 6035
BspPI GGATC 7 cut(s) 3442, 4422, 6155, 7251, 7547, 7649, 8057
BspQI GCTCTTC 2 cut(s) 2961, 7575
BspT107I GGYRCC 1 cut(s) 6386
BspTI CTTAAG 2 cut(s) 2741, 3833
BspTNI GGTCTC 1 cut(s) 455
BsrBI CCGCTC 1 cut(s) 2137
BsrDI GCAATG 5 cut(s) 254, 1220, 1232, 3436, 4496
BsrFI RCCGGY 2 cut(s) 2292, 6869
BsrGI TGTACA 2 cut(s) 523, 5632
BssAI RCCGGY 2 cut(s) 2292, 6869
BssNI GRCGYC 3 cut(s) 55, 239, 5995
BssSI CACGAG 2 cut(s) 1758, 3866
BssT1I CCWWGG 5 cut(s) 404, 903, 1460, 3322, 6840
Bst2BI CACGAG 2 cut(s) 1758, 3866
Bst2UI CCWGG 6 cut(s) 3993, 4057, 4307, 4346, 5960, 7223
Bst6I CTCTTC 3 cut(s) 2961, 4667, 7575
BstACI GRCGYC 3 cut(s) 55, 239, 5995
BstAFI CTTAAG 2 cut(s) 2741, 3833
BstAPI GCANNNNNTGC 3 cut(s) 784, 1159, 2046
BstAUI TGTACA 2 cut(s) 523, 5632
BstBAI YACGTR 2 cut(s) 1448, 3344
BstENI CCTNNNNNAGG 1 cut(s) 754
BstHHI GCGC 3 cut(s) 6108, 7930, 8049
BstNI CCWGG 6 cut(s) 3993, 4057, 4307, 4346, 5960, 7223
BstSFI CTRYAG 4 cut(s) 2523, 3400, 4191, 6957
BstSLI GKGCMC 1 cut(s) 4843
BstV2I GAAGAC 4 cut(s) 61, 2996, 7457, 7836
BstX2I RGATCY 8 cut(s) 373, 474, 3290, 3434, 5617, 6160, 7243, 7552
BstXI CCANNNNNNTGG 2 cut(s) 2354, 7296
BstYI RGATCY 8 cut(s) 373, 474, 3290, 3434, 5617, 6160, 7243, 7552
Bsu15I ATCGAT 1 cut(s) 5407
BsuI GTATCC 2 cut(s) 3577, 5537
BsuTUI ATCGAT 1 cut(s) 5407
BtgZI GCGATG 2 cut(s) 202, 4788
BtrI CACGTC 1 cut(s) 3801
BtsI GCAGTG 1 cut(s) 3498
BveI ACCTGC 3 cut(s) 1682, 2727, 6035
CaiI CAGNNNCTG 2 cut(s) 848, 3809
CciI TCATGA 4 cut(s) 1552, 3595, 7369, 7419
CfoI GCGC 3 cut(s) 6108, 7930, 8049
Cfr10I RCCGGY 2 cut(s) 2292, 6869
Cfr9I CCCGGG 1 cut(s) 5341
ClaI ATCGAT 1 cut(s) 5407
CseI GACGC 4 cut(s) 63, 247, 6003, 8167
CspAI ACCGGT 1 cut(s) 2292
CspCI CAANNNNNGTGG 2 cut(s) 6929, 6964
DraI TTTAAA 4 cut(s) 1512, 2613, 2644, 3985
DraIII CACNNNGTG 1 cut(s) 4291
DrdI GACNNNNNNGTC 2 cut(s) 2458, 4361
DriI GACNNNNNGTC 1 cut(s) 1897
DseDI GACNNNNNNGTC 2 cut(s) 2458, 4361
EaeI YGGCCR 4 cut(s) 1027, 3679, 5445, 5956
Eam1104I CTCTTC 3 cut(s) 2961, 4667, 7575
Eam1105I GACNNNNNGTC 1 cut(s) 1897
EarI CTCTTC 3 cut(s) 2961, 4667, 7575
Eco130I CCWWGG 5 cut(s) 404, 903, 1460, 3322, 6840
Eco24I GRGCYC 3 cut(s) 158, 342, 1234
Eco31I GGTCTC 1 cut(s) 455
Eco32I GATATC 3 cut(s) 1312, 3319, 4393
Eco57I CTGAAG 6 cut(s) 2106, 2262, 2531, 3423, 3831, 4482
Eco72I CACGTG 2 cut(s) 1448, 3344
Eco88I CYCGRG 2 cut(s) 5341, 6521
EcoNI CCTNNNNNAGG 1 cut(s) 754
EcoO109I RGGNCCY 4 cut(s) 747, 3619, 3671, 4984
EcoRI GAATTC 2 cut(s) 2562, 5017
EcoRII CCWGG 6 cut(s) 3991, 4055, 4305, 4344, 5958, 7221
EcoRV GATATC 3 cut(s) 1312, 3319, 4393
EcoT14I CCWWGG 5 cut(s) 404, 903, 1460, 3322, 6840
EcoT22I ATGCAT 2 cut(s) 3340, 4423
EcoT38I GRGCYC 3 cut(s) 158, 342, 1234
ErhI CCWWGG 5 cut(s) 404, 903, 1460, 3322, 6840
Esp3I CGTCTC 1 cut(s) 6638
FalI AAGNNNNNCTT 6 cut(s) 3306, 3338, 5238, 5270, 5607, 5639
FaqI GGGAC 8 cut(s) 185, 760, 3336, 3632, 3684, 5182, 6141, 7548
FauI CCCGC 1 cut(s) 145
FauNDI CATATG 1 cut(s) 4656
FbaI TGATCA 7 cut(s) 1657, 2422, 3862, 5058, 5893, 6409, 6817
FblI GTMKAC 4 cut(s) 1828, 4272, 7106, 7411
FriOI GRGCYC 3 cut(s) 158, 342, 1234
GlaI GCGC 3 cut(s) 6107, 7929, 8048
GsaI CCCAGC 3 cut(s) 1573, 3678, 5468
GsuI CTGGAG 4 cut(s) 4855, 4955, 7220, 7708
HapII CCGG 7 cut(s) 51, 169, 2293, 3455, 5342, 6870, 7999
HgaI GACGC 4 cut(s) 63, 247, 6003, 8167
HhaI GCGC 3 cut(s) 6108, 7930, 8049
Hin1I GRCGYC 3 cut(s) 55, 239, 5995
Hin6I GCGC 3 cut(s) 6106, 7928, 8047
HinP1I GCGC 3 cut(s) 6106, 7928, 8047
HincII GTYRAC 8 cut(s) 1203, 1324, 2157, 2451, 2879, 5853, 6369, 6502
HindII GTYRAC 8 cut(s) 1203, 1324, 2157, 2451, 2879, 5853, 6369, 6502
HindIII AAGCTT 6 cut(s) 530, 1423, 2244, 3050, 3113, 7608
HpaI GTTAAC 3 cut(s) 1324, 5853, 6502
HpaII CCGG 7 cut(s) 51, 169, 2293, 3455, 5342, 6870, 7999
HphI GGTGA 6 cut(s) 833, 1381, 4967, 5975, 6229, 6859
Hpy99I CGWCG 1 cut(s) 6003
HpyCH4IV ACGT 9 cut(s) 161, 976, 1447, 2127, 3343, 3800, 4231, 7303, 7945
HpySE526I ACGT 9 cut(s) 161, 976, 1447, 2127, 3343, 3800, 4231, 7303, 7945
Hsp92I GRCGYC 3 cut(s) 55, 239, 5995
HspAI GCGC 3 cut(s) 6106, 7928, 8047
KflI GGGWCCC 1 cut(s) 3671
Kpn2I TCCGGA 2 cut(s) 3454, 7998
Ksp22I TGATCA 7 cut(s) 1657, 2422, 3862, 5058, 5893, 6409, 6817
KspAI GTTAAC 3 cut(s) 1324, 5853, 6502
LguI GCTCTTC 2 cut(s) 2961, 7575
MaeII ACGT 9 cut(s) 161, 976, 1447, 2127, 3343, 3800, 4231, 7303, 7945
MbiI CCGCTC 1 cut(s) 2137
MfeI CAATTG 3 cut(s) 1495, 2629, 6495
MflI RGATCY 8 cut(s) 373, 474, 3290, 3434, 5617, 6160, 7243, 7552
MhlI GDGCHC 5 cut(s) 158, 342, 1234, 2973, 4843
MlsI TGGCCA 2 cut(s) 1029, 5958
MluNI TGGCCA 2 cut(s) 1029, 5958
MlyI GAGTC 7 cut(s) 410, 723, 893, 2162, 2957, 5135, 5351
MmeI TCCRAC 4 cut(s) 2591, 3852, 5184, 5909
Mox20I TGGCCA 2 cut(s) 1029, 5958
Mph1103I ATGCAT 2 cut(s) 3340, 4423
MroI TCCGGA 2 cut(s) 3454, 7998
MroXI GAANNNNTTC 5 cut(s) 1455, 3114, 5972, 6582, 7807
MscI TGGCCA 2 cut(s) 1029, 5958
MslI CAYNNNNRTG 7 cut(s) 1109, 1225, 2323, 6135, 6229, 6699, 7294
Msp20I TGGCCA 2 cut(s) 1029, 5958
MspA1I CMGCKG 2 cut(s) 1573, 3678
MspCI CTTAAG 2 cut(s) 2741, 3833
MspI CCGG 7 cut(s) 51, 169, 2293, 3455, 5342, 6870, 7999
MssI GTTTAAAC 1 cut(s) 3985
MunI CAATTG 3 cut(s) 1495, 2629, 6495
Mva1269I GAATGC 5 cut(s) 4321, 4620, 6694, 7522, 8161
MvaI CCWGG 6 cut(s) 3993, 4057, 4307, 4346, 5960, 7223
NciI CCSGG 4 cut(s) 51, 170, 5342, 5343
NdeI CATATG 1 cut(s) 4656
NmeAIII GCCGAG 1 cut(s) 799
NmuCI GTSAC 9 cut(s) 3170, 3796, 4845, 5003, 5578, 6587, 7084, 7120, 7345
NsiI ATGCAT 2 cut(s) 3340, 4423
OliI CACNNNNGTG 1 cut(s) 7294
PaeI GCATGC 1 cut(s) 7359
PagI TCATGA 4 cut(s) 1552, 3595, 7369, 7419
PaqCI CACCTGC 1 cut(s) 6035
PciI ACATGT 4 cut(s) 4452, 4960, 5533, 7293
PciSI GCTCTTC 2 cut(s) 2961, 7575
PctI GAATGC 5 cut(s) 4321, 4620, 6694, 7522, 8161
PdmI GAANNNNTTC 5 cut(s) 1455, 3114, 5972, 6582, 7807
PflFI GACNNNGTC 1 cut(s) 5997
PflMI CCANNNNNTGG 2 cut(s) 5591, 6799
PfoI TCCNGGA 2 cut(s) 168, 4305
PinAI ACCGGT 1 cut(s) 2292
PleI GAGTC 7 cut(s) 410, 722, 893, 2161, 2956, 5135, 5351
PmaCI CACGTG 2 cut(s) 1448, 3344
PmeI GTTTAAAC 1 cut(s) 3985
PmlI CACGTG 2 cut(s) 1448, 3344
PpsI GAGTC 7 cut(s) 410, 722, 893, 2161, 2956, 5135, 5351
Ppu21I YACGTR 2 cut(s) 1448, 3344
PpuMI RGGWCCY 3 cut(s) 747, 3619, 3671
PscI ACATGT 4 cut(s) 4452, 4960, 5533, 7293
PshBI ATTAAT 2 cut(s) 960, 4469
Psp1406I AACGTT 2 cut(s) 976, 2127
Psp5II RGGWCCY 3 cut(s) 747, 3619, 3671
Psp6I CCWGG 6 cut(s) 3991, 4055, 4305, 4344, 5958, 7221
PspCI CACGTG 2 cut(s) 1448, 3344
PspFI CCCAGC 3 cut(s) 1569, 3674, 5464
PspGI CCWGG 6 cut(s) 3991, 4055, 4305, 4344, 5958, 7221
PspPPI RGGWCCY 3 cut(s) 747, 3619, 3671
PsrI GAACNNNNNNTAC 2 cut(s) 3558, 3590
PstI CTGCAG 4 cut(s) 2527, 3404, 4195, 6961
PstNI CAGNNNCTG 2 cut(s) 848, 3809
PsuI RGATCY 8 cut(s) 373, 474, 3290, 3434, 5617, 6160, 7243, 7552
PsyI GACNNNGTC 1 cut(s) 5997
PvuII CAGCTG 1 cut(s) 1573
RseI CAYNNNNRTG 7 cut(s) 1109, 1225, 2323, 6135, 6229, 6699, 7294
SapI GCTCTTC 2 cut(s) 2961, 7575
ScaI AGTACT 1 cut(s) 5209
SchI GAGTC 7 cut(s) 410, 723, 893, 2162, 2957, 5135, 5351
SduI GDGCHC 5 cut(s) 158, 342, 1234, 2973, 4843
SfcI CTRYAG 4 cut(s) 2523, 3400, 4191, 6957
SmaI CCCGGG 1 cut(s) 5343
SmiMI CAYNNNNRTG 7 cut(s) 1109, 1225, 2323, 6135, 6229, 6699, 7294
SphI GCATGC 1 cut(s) 7359
SspI AATATT 8 cut(s) 1687, 2013, 2044, 3248, 6289, 7026, 7077, 7705
StyI CCWWGG 5 cut(s) 404, 903, 1460, 3322, 6840
TaiI ACGT 9 cut(s) 164, 979, 1450, 2130, 3346, 3803, 4234, 7306, 7948
TatI WGTACW 9 cut(s) 504, 523, 4043, 5207, 5507, 5632, 6373, 6909, 7978
TauI GCSGC 7 cut(s) 60, 148, 987, 3681, 5095, 5450, 5867
TseFI GTSAC 9 cut(s) 3170, 3796, 4845, 5003, 5578, 6587, 7084, 7120, 7345
Tsp45I GTSAC 9 cut(s) 3170, 3796, 4845, 5003, 5578, 6587, 7084, 7120, 7345
TspGWI ACGGA 6 cut(s) 1855, 2990, 4346, 5411, 6153, 6703
TspMI CCCGGG 1 cut(s) 5341
Tth111I GACNNNGTC 1 cut(s) 5997
Van91I CCANNNNNTGG 2 cut(s) 5591, 6799
Vha464I CTTAAG 2 cut(s) 2741, 3833
VspI ATTAAT 2 cut(s) 960, 4469
XagI CCTNNNNNAGG 1 cut(s) 754
XbaI TCTAGA 6 cut(s) 305, 368, 1901, 2204, 3722, 4222
XcmI CCANNNNNNNNNTGG 4 cut(s) 1945, 4063, 5143, 5836
XmaI CCCGGG 1 cut(s) 5341
XmiI GTMKAC 4 cut(s) 1828, 4272, 7106, 7411
XmnI GAANNNNTTC 5 cut(s) 1455, 3114, 5972, 6582, 7807
ZrmI AGTACT 1 cut(s) 5209
Zsp2I ATGCAT 2 cut(s) 3340, 4423
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.