Small subunit processome component 20 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G30990 AT4G30990 AT4G30990 |
| fragaria_vesca | FvH4_6g30710 FvH4_6g30710 FvH4_6g30710 FvH4_6g30710 FvH4_6g30710 FvH4_6g30710 FvH4_6g30710 |
| malus_domestica | MD17G1201300.v1.1 |
| prunus_persica | Prupe.3G074200_v2.0.a1 Prupe.3G074200_v2.0.a1 Prupe.3G074200_v2.0.a1 Prupe.3G077100_v2.0.a1 Prupe.3G077100_v2.0.a1 Prupe.3G077100_v2.0.a1 |
| pyrus_communis | pycom17g20520 |
| rosa_chinensis | RchiOBHm_Chr2g0137101 |
| rosa_laevigata | RLG00000019624 |
| rosa_multiflora | Rmu_sc0000894.1_g000061 |
| rosa_roxburghii | Rroxscaffold_2G00107570 |
| rosa_rugosa | Rorug02G0338800 Rorug02G0338800 |
| rosa_samantha | Rh2AG387300 Rh2BG395000 Rh2CG374600 Rh2DG410200 |
| rosa_wichuraiana | Rw2G031740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 1173, 5609, 7100 |
| AarI | CACCTGC | 1 cut(s) | 5849 |
| AatII | GACGTC | 1 cut(s) | 7648 |
| Acc36I | ACCTGC | 2 cut(s) | 5849, 6085 |
| AccB1I | GGYRCC | 1 cut(s) | 4440 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 6613 |
| AccI | GTMKAC | 4 cut(s) | 414, 989, 1587, 7648 |
| AccIII | TCCGGA | 2 cut(s) | 2979, 6334 |
| AclI | AACGTT | 1 cut(s) | 2440 |
| AcoI | YGGCCR | 3 cut(s) | 52, 2392, 3640 |
| AcuI | CTGAAG | 9 cut(s) | 1134, 1326, 2078, 2223, 2790, 3792, 4643, 6323, 7169 |
| AcvI | CACGTG | 1 cut(s) | 3302 |
| AcyI | GRCGYC | 2 cut(s) | 239, 7645 |
| AdeI | CACNNNGTG | 1 cut(s) | 7212 |
| AfeI | AGCGCT | 1 cut(s) | 7748 |
| AflII | CTTAAG | 1 cut(s) | 2699 |
| AflIII | ACRYGT | 6 cut(s) | 1807, 2653, 3262, 3301, 4413, 6993 |
| AgeI | ACCGGT | 1 cut(s) | 2253 |
| AhlI | ACTAGT | 1 cut(s) | 3886 |
| AjiI | CACGTC | 1 cut(s) | 3762 |
| AjnI | CCWGG | 8 cut(s) | 151, 378, 485, 1439, 3952, 4016, 4266, 5155 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 3264, 3296, 7065, 7097 |
| AleI | CACNNNNGTG | 3 cut(s) | 3709, 6513, 6994 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3324, 3356 |
| Alw21I | GWGCWC | 8 cut(s) | 528, 3042, 3158, 4063, 4326, 6117, 6510, 7224 |
| Alw44I | GTGCAC | 2 cut(s) | 524, 7220 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 830, 2557, 3770, 6421, 6760 |
| Ama87I | CYCGRG | 1 cut(s) | 369 |
| Aor13HI | TCCGGA | 2 cut(s) | 2979, 6334 |
| Aor51HI | AGCGCT | 1 cut(s) | 7748 |
| AoxI | GGCC | 9 cut(s) | 24, 52, 1545, 2179, 2392, 3640, 5737, 5848, 7812 |
| ApaLI | GTGCAC | 2 cut(s) | 524, 7220 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 96, 128, 244, 276, 5630, 5662, 6266, 6298 |
| AseI | ATTAAT | 1 cut(s) | 596 |
| AsiGI | ACCGGT | 1 cut(s) | 2253 |
| Asp700I | GAANNNNTTC | 6 cut(s) | 2334, 3180, 3206, 3276, 6396, 6821 |
| AspLEI | GCGC | 3 cut(s) | 1402, 4581, 7749 |
| AspS9I | GGNCC | 7 cut(s) | 247, 1546, 1601, 2179, 3308, 6274, 7812 |
| AsuC2I | CCSGG | 1 cut(s) | 170 |
| AsuHPI | GGTGA | 8 cut(s) | 562, 1012, 2411, 3610, 4879, 5592, 5789, 6758 |
| AsuII | TTCGAA | 3 cut(s) | 291, 906, 7500 |
| AvaI | CYCGRG | 1 cut(s) | 369 |
| AvaII | GGWCC | 4 cut(s) | 247, 1601, 3308, 6274 |
| AxyI | CCTNAGG | 1 cut(s) | 5845 |
| BaeGI | GKGCMC | 4 cut(s) | 528, 2949, 7224, 7861 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 646, 679, 3857, 3890, 5069, 5102 |
| BalI | TGGCCA | 2 cut(s) | 2394, 3642 |
| BamHI | GGATCC | 2 cut(s) | 1443, 5974 |
| BanI | GGYRCC | 1 cut(s) | 4440 |
| BanII | GRGCYC | 3 cut(s) | 1216, 3158, 4063 |
| BauI | CACGAG | 1 cut(s) | 227 |
| BbrPI | CACGTG | 1 cut(s) | 3302 |
| BbsI | GAAGAC | 6 cut(s) | 61, 106, 2490, 2954, 3849, 7157 |
| Bbv12I | GWGCWC | 8 cut(s) | 528, 3042, 3158, 4063, 4326, 6117, 6510, 7224 |
| BbvCI | CCTCAGC | 1 cut(s) | 5475 |
| BceAI | ACGGC | 4 cut(s) | 11, 226, 2499, 3495 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 312, 346 |
| BciT130I | CCWGG | 8 cut(s) | 153, 380, 487, 1441, 3954, 4018, 4268, 5157 |
| BclI | TGATCA | 2 cut(s) | 2383, 5707 |
| BcnI | CCSGG | 1 cut(s) | 170 |
| BcuI | ACTAGT | 1 cut(s) | 3886 |
| BfoI | RGCGCY | 1 cut(s) | 7750 |
| BfrI | CTTAAG | 1 cut(s) | 2699 |
| BfuAI | ACCTGC | 2 cut(s) | 5849, 6085 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1704 |
| BglII | AGATCT | 4 cut(s) | 373, 474, 3506, 5431 |
| BlpI | GCTNAGC | 1 cut(s) | 1145 |
| BmcAI | AGTACT | 1 cut(s) | 4119 |
| Bme1390I | CCNGG | 9 cut(s) | 153, 170, 380, 487, 1441, 3954, 4018, 4268, 5157 |
| Bme18I | GGWCC | 4 cut(s) | 247, 1601, 3308, 6274 |
| BmeT110I | CYCGRG | 1 cut(s) | 369 |
| BmgBI | CACGTC | 1 cut(s) | 3762 |
| BmgT120I | GGNCC | 7 cut(s) | 247, 1546, 1601, 2179, 3308, 6274, 7812 |
| BmrFI | CCNGG | 9 cut(s) | 153, 170, 380, 487, 1441, 3954, 4018, 4268, 5157 |
| BmrI | ACTGGG | 1 cut(s) | 1867 |
| BmuI | ACTGGG | 1 cut(s) | 1867 |
| BoxI | GACNNNNGTC | 1 cut(s) | 973 |
| BpiI | GAAGAC | 6 cut(s) | 61, 106, 2490, 2954, 3849, 7157 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 7043, 7075 |
| BpmI | CTGGAG | 2 cut(s) | 401, 5178 |
| Bpu10I | CCTNAGC | 3 cut(s) | 21, 5475, 7060 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1145 |
| Bpu14I | TTCGAA | 3 cut(s) | 291, 906, 7500 |
| BpuEI | CTTGAG | 7 cut(s) | 356, 2998, 4047, 4456, 6740, 7418, 7694 |
| BpuMI | CCSGG | 1 cut(s) | 170 |
| Bsa29I | ATCGAT | 3 cut(s) | 108, 1635, 6882 |
| BsaAI | YACGTR | 2 cut(s) | 3302, 7678 |
| BsaBI | GATNNNNATC | 6 cut(s) | 2240, 3423, 3511, 4668, 7257, 7389 |
| BsaHI | GRCGYC | 2 cut(s) | 239, 7645 |
| BsaI | GGTCTC | 1 cut(s) | 275 |
| BsaJI | CCNNGG | 8 cut(s) | 151, 404, 885, 2395, 3436, 3952, 3953, 4639 |
| BsaWI | WCCGGW | 3 cut(s) | 2253, 2979, 6334 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 5267, 5297 |
| Bse118I | RCCGGY | 2 cut(s) | 50, 2253 |
| Bse21I | CCTNAGG | 1 cut(s) | 5845 |
| Bse3DI | GCAATG | 7 cut(s) | 254, 1214, 2360, 4457, 4552, 4737, 5853 |
| Bse8I | GATNNNNATC | 6 cut(s) | 2240, 3423, 3511, 4668, 7257, 7389 |
| BseAI | TCCGGA | 2 cut(s) | 2979, 6334 |
| BseBI | CCWGG | 8 cut(s) | 153, 380, 487, 1441, 3954, 4018, 4268, 5157 |
| BseCI | ATCGAT | 3 cut(s) | 108, 1635, 6882 |
| BseDI | CCNNGG | 8 cut(s) | 151, 404, 885, 2395, 3436, 3952, 3953, 4639 |
| BseJI | GATNNNNATC | 6 cut(s) | 2240, 3423, 3511, 4668, 7257, 7389 |
| BseMI | GCAATG | 7 cut(s) | 254, 1214, 2360, 4457, 4552, 4737, 5853 |
| BseRI | GAGGAG | 2 cut(s) | 2112, 6894 |
| BseSI | GKGCMC | 4 cut(s) | 528, 2949, 7224, 7861 |
| BseX3I | CGGCCG | 1 cut(s) | 52 |
| BseYI | CCCAGC | 1 cut(s) | 2972 |
| BsgI | GTGCAG | 5 cut(s) | 621, 1148, 5115, 6789, 7269 |
| Bsh1285I | CGRYCG | 1 cut(s) | 55 |
| BshFI | GGCC | 9 cut(s) | 26, 54, 1547, 2181, 2394, 3642, 5739, 5850, 7814 |
| BshNI | GGYRCC | 1 cut(s) | 4440 |
| BshTI | ACCGGT | 1 cut(s) | 2253 |
| BshVI | ATCGAT | 3 cut(s) | 108, 1635, 6882 |
| BsiEI | CGRYCG | 1 cut(s) | 55 |
| BsiHKAI | GWGCWC | 8 cut(s) | 528, 3042, 3158, 4063, 4326, 6117, 6510, 7224 |
| BsiHKCI | CYCGRG | 1 cut(s) | 369 |
| BsiSI | CCGG | 5 cut(s) | 51, 169, 2254, 2980, 6335 |
| BslFI | GGGAC | 8 cut(s) | 19, 185, 352, 3294, 3716, 6287, 7248, 7609 |
| BsmBI | CGTCTC | 2 cut(s) | 85, 6683 |
| BsmFI | GGGAC | 8 cut(s) | 19, 185, 352, 3294, 3716, 6287, 7248, 7609 |
| BsmI | GAATGC | 8 cut(s) | 914, 1086, 1149, 4156, 4282, 4572, 7202, 7780 |
| BsnI | GGCC | 9 cut(s) | 26, 54, 1547, 2181, 2394, 3642, 5739, 5850, 7814 |
| Bso31I | GGTCTC | 1 cut(s) | 275 |
| BsoBI | CYCGRG | 1 cut(s) | 369 |
| Bsp119I | TTCGAA | 3 cut(s) | 291, 906, 7500 |
| Bsp13I | TCCGGA | 2 cut(s) | 2979, 6334 |
| Bsp1407I | TGTACA | 3 cut(s) | 2691, 5731, 5953 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1145 |
| BspANI | GGCC | 9 cut(s) | 26, 54, 1547, 2181, 2394, 3642, 5739, 5850, 7814 |
| BspDI | ATCGAT | 3 cut(s) | 108, 1635, 6882 |
| BspEI | TCCGGA | 2 cut(s) | 2979, 6334 |
| BspHI | TCATGA | 7 cut(s) | 1320, 1531, 6810, 6895, 6907, 7069, 7119 |
| BspMI | ACCTGC | 2 cut(s) | 5849, 6085 |
| BspQI | GCTCTTC | 1 cut(s) | 3063 |
| BspT104I | TTCGAA | 3 cut(s) | 291, 906, 7500 |
| BspT107I | GGYRCC | 1 cut(s) | 4440 |
| BspTI | CTTAAG | 1 cut(s) | 2699 |
| BspTNI | GGTCTC | 1 cut(s) | 275 |
| BsrDI | GCAATG | 7 cut(s) | 254, 1214, 2360, 4457, 4552, 4737, 5853 |
| BsrFI | RCCGGY | 2 cut(s) | 50, 2253 |
| BsrGI | TGTACA | 3 cut(s) | 2691, 5731, 5953 |
| BssAI | RCCGGY | 2 cut(s) | 50, 2253 |
| BssECI | CCNNGG | 8 cut(s) | 151, 404, 885, 2395, 3436, 3952, 3953, 4639 |
| BssNI | GRCGYC | 2 cut(s) | 239, 7645 |
| BssSI | CACGAG | 1 cut(s) | 227 |
| BssT1I | CCWWGG | 5 cut(s) | 404, 885, 2395, 3436, 4639 |
| Bst2BI | CACGAG | 1 cut(s) | 227 |
| Bst2UI | CCWGG | 8 cut(s) | 153, 380, 487, 1441, 3954, 4018, 4268, 5157 |
| Bst6I | CTCTTC | 7 cut(s) | 16, 401, 3063, 3665, 3914, 4243, 4662 |
| BstACI | GRCGYC | 2 cut(s) | 239, 7645 |
| BstAFI | CTTAAG | 1 cut(s) | 2699 |
| BstAUI | TGTACA | 3 cut(s) | 2691, 5731, 5953 |
| BstBAI | YACGTR | 2 cut(s) | 3302, 7678 |
| BstBI | TTCGAA | 3 cut(s) | 291, 906, 7500 |
| BstC8I | GCNNGC | 5 cut(s) | 52, 1672, 6323, 7415, 7538 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 150, 760 |
| BstH2I | RGCGCY | 1 cut(s) | 7750 |
| BstHHI | GCGC | 3 cut(s) | 1402, 4581, 7749 |
| BstMCI | CGRYCG | 1 cut(s) | 55 |
| BstNI | CCWGG | 8 cut(s) | 153, 380, 487, 1441, 3954, 4018, 4268, 5157 |
| BstNSI | RCATGY | 8 cut(s) | 1811, 2999, 3266, 4417, 5052, 5351, 6997, 7372 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 973 |
| BstSCI | CCNGG | 9 cut(s) | 151, 168, 378, 485, 1439, 3952, 4016, 4266, 5155 |
| BstSLI | GKGCMC | 4 cut(s) | 528, 2949, 7224, 7861 |
| BstSNI | TACGTA | 1 cut(s) | 7678 |
| BstV2I | GAAGAC | 6 cut(s) | 61, 106, 2490, 2954, 3849, 7157 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 6996 |
| BstZI | CGGCCG | 1 cut(s) | 52 |
| Bsu15I | ATCGAT | 3 cut(s) | 108, 1635, 6882 |
| Bsu36I | CCTNAGG | 1 cut(s) | 5845 |
| BsuRI | GGCC | 9 cut(s) | 26, 54, 1547, 2181, 2394, 3642, 5739, 5850, 7814 |
| BsuTUI | ATCGAT | 3 cut(s) | 108, 1635, 6882 |
| BtgZI | GCGATG | 5 cut(s) | 623, 1871, 2031, 3011, 5180 |
| BtrI | CACGTC | 1 cut(s) | 3762 |
| BtsI | GCAGTG | 5 cut(s) | 977, 3042, 3459, 3704, 6117 |
| BveI | ACCTGC | 2 cut(s) | 5849, 6085 |
| Cac8I | GCNNGC | 5 cut(s) | 52, 1672, 6323, 7415, 7538 |
| CaiI | CAGNNNCTG | 5 cut(s) | 830, 2557, 3770, 6421, 6760 |
| CciI | TCATGA | 7 cut(s) | 1320, 1531, 6810, 6895, 6907, 7069, 7119 |
| CfoI | GCGC | 3 cut(s) | 1402, 4581, 7749 |
| Cfr10I | RCCGGY | 2 cut(s) | 50, 2253 |
| Cfr13I | GGNCC | 7 cut(s) | 247, 1546, 1601, 2179, 3308, 6274, 7812 |
| ClaI | ATCGAT | 3 cut(s) | 108, 1635, 6882 |
| CseI | GACGC | 3 cut(s) | 67, 247, 2965 |
| CspAI | ACCGGT | 1 cut(s) | 2253 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 817, 852 |
| DraI | TTTAAA | 3 cut(s) | 1491, 1926, 5328 |
| DraIII | CACNNNGTG | 1 cut(s) | 7212 |
| EaeI | YGGCCR | 3 cut(s) | 52, 2392, 3640 |
| EagI | CGGCCG | 1 cut(s) | 52 |
| Eam1104I | CTCTTC | 7 cut(s) | 16, 401, 3063, 3665, 3914, 4243, 4662 |
| EarI | CTCTTC | 7 cut(s) | 16, 401, 3063, 3665, 3914, 4243, 4662 |
| EciI | GGCGGA | 1 cut(s) | 37 |
| Ecl136II | GAGCTC | 2 cut(s) | 3156, 4061 |
| EclXI | CGGCCG | 1 cut(s) | 52 |
| Eco105I | TACGTA | 1 cut(s) | 7678 |
| Eco130I | CCWWGG | 5 cut(s) | 404, 885, 2395, 3436, 4639 |
| Eco24I | GRGCYC | 3 cut(s) | 1216, 3158, 4063 |
| Eco31I | GGTCTC | 1 cut(s) | 275 |
| Eco32I | GATATC | 1 cut(s) | 3474 |
| Eco47I | GGWCC | 4 cut(s) | 247, 1601, 3308, 6274 |
| Eco47III | AGCGCT | 1 cut(s) | 7748 |
| Eco52I | CGGCCG | 1 cut(s) | 52 |
| Eco53kI | GAGCTC | 2 cut(s) | 3156, 4061 |
| Eco57I | CTGAAG | 9 cut(s) | 1134, 1326, 2078, 2223, 2790, 3792, 4643, 6323, 7169 |
| Eco72I | CACGTG | 1 cut(s) | 3302 |
| Eco81I | CCTNAGG | 1 cut(s) | 5845 |
| Eco88I | CYCGRG | 1 cut(s) | 369 |
| EcoICRI | GAGCTC | 2 cut(s) | 3156, 4061 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 150, 760 |
| EcoO109I | RGGNCCY | 1 cut(s) | 6274 |
| EcoRI | GAATTC | 2 cut(s) | 3572, 6007 |
| EcoRII | CCWGG | 8 cut(s) | 151, 378, 485, 1439, 3952, 4016, 4266, 5155 |
| EcoRV | GATATC | 1 cut(s) | 3474 |
| EcoT14I | CCWWGG | 5 cut(s) | 404, 885, 2395, 3436, 4639 |
| EcoT22I | ATGCAT | 3 cut(s) | 3298, 4009, 4384 |
| EcoT38I | GRGCYC | 3 cut(s) | 1216, 3158, 4063 |
| ErhI | CCWWGG | 5 cut(s) | 404, 885, 2395, 3436, 4639 |
| Esp3I | CGTCTC | 2 cut(s) | 85, 6683 |
| FaqI | GGGAC | 8 cut(s) | 19, 185, 352, 3294, 3716, 6287, 7248, 7609 |
| FauI | CCCGC | 2 cut(s) | 5399, 6189 |
| FbaI | TGATCA | 2 cut(s) | 2383, 5707 |
| FblI | GTMKAC | 4 cut(s) | 414, 989, 1587, 7648 |
| FriOI | GRGCYC | 3 cut(s) | 1216, 3158, 4063 |
| GlaI | GCGC | 3 cut(s) | 1401, 4580, 7748 |
| GsaI | CCCAGC | 1 cut(s) | 2976 |
| GsuI | CTGGAG | 2 cut(s) | 401, 5178 |
| HaeII | RGCGCY | 1 cut(s) | 7750 |
| HaeIII | GGCC | 9 cut(s) | 26, 54, 1547, 2181, 2394, 3642, 5739, 5850, 7814 |
| HapII | CCGG | 5 cut(s) | 51, 169, 2254, 2980, 6335 |
| HgaI | GACGC | 3 cut(s) | 67, 247, 2965 |
| HhaI | GCGC | 3 cut(s) | 1402, 4581, 7749 |
| Hin1I | GRCGYC | 2 cut(s) | 239, 7645 |
| Hin6I | GCGC | 3 cut(s) | 1400, 4579, 7747 |
| HinP1I | GCGC | 3 cut(s) | 1400, 4579, 7747 |
| HincII | GTYRAC | 6 cut(s) | 415, 1185, 1306, 2118, 5116, 6183 |
| HindII | GTYRAC | 6 cut(s) | 415, 1185, 1306, 2118, 5116, 6183 |
| HindIII | AAGCTT | 7 cut(s) | 530, 1240, 1405, 2205, 4961, 5591, 7308 |
| HpaI | GTTAAC | 3 cut(s) | 1306, 5116, 6183 |
| HpaII | CCGG | 5 cut(s) | 51, 169, 2254, 2980, 6335 |
| HphI | GGTGA | 8 cut(s) | 562, 1012, 2411, 3610, 4879, 5592, 5789, 6758 |
| Hpy99I | CGWCG | 1 cut(s) | 5817 |
| Hsp92I | GRCGYC | 2 cut(s) | 239, 7645 |
| HspAI | GCGC | 3 cut(s) | 1400, 4579, 7747 |
| KflI | GGGWCCC | 1 cut(s) | 6274 |
| Kpn2I | TCCGGA | 2 cut(s) | 2979, 6334 |
| KroI | GCCGGC | 1 cut(s) | 50 |
| KroNI | GCCGGC | 1 cut(s) | 52 |
| Ksp22I | TGATCA | 2 cut(s) | 2383, 5707 |
| KspAI | GTTAAC | 3 cut(s) | 1306, 5116, 6183 |
| LguI | GCTCTTC | 1 cut(s) | 3063 |
| MfeI | CAATTG | 4 cut(s) | 1262, 2840, 5016, 6309 |
| MlsI | TGGCCA | 2 cut(s) | 2394, 3642 |
| MluNI | TGGCCA | 2 cut(s) | 2394, 3642 |
| MmeI | TCCRAC | 4 cut(s) | 2439, 5265, 5723, 5952 |
| Mox20I | TGGCCA | 2 cut(s) | 2394, 3642 |
| Mph1103I | ATGCAT | 3 cut(s) | 3298, 4009, 4384 |
| MroI | TCCGGA | 2 cut(s) | 2979, 6334 |
| MroNI | GCCGGC | 1 cut(s) | 50 |
| MroXI | GAANNNNTTC | 6 cut(s) | 2334, 3180, 3206, 3276, 6396, 6821 |
| MscI | TGGCCA | 2 cut(s) | 2394, 3642 |
| MslI | CAYNNNNRTG | 7 cut(s) | 1091, 3709, 4865, 5047, 6043, 6513, 6994 |
| Msp20I | TGGCCA | 2 cut(s) | 2394, 3642 |
| MspA1I | CMGCKG | 2 cut(s) | 5406, 5681 |
| MspCI | CTTAAG | 1 cut(s) | 2699 |
| MspI | CCGG | 5 cut(s) | 51, 169, 2254, 2980, 6335 |
| MspR9I | CCNGG | 9 cut(s) | 153, 170, 380, 487, 1441, 3954, 4018, 4268, 5157 |
| MunI | CAATTG | 4 cut(s) | 1262, 2840, 5016, 6309 |
| Mva1269I | GAATGC | 8 cut(s) | 914, 1086, 1149, 4156, 4282, 4572, 7202, 7780 |
| MvaI | CCWGG | 8 cut(s) | 153, 380, 487, 1441, 3954, 4018, 4268, 5157 |
| NaeI | GCCGGC | 1 cut(s) | 52 |
| NciI | CCSGG | 1 cut(s) | 170 |
| NgoMIV | GCCGGC | 1 cut(s) | 50 |
| NsiI | ATGCAT | 3 cut(s) | 3298, 4009, 4384 |
| NspI | RCATGY | 8 cut(s) | 1811, 2999, 3266, 4417, 5052, 5351, 6997, 7372 |
| NspV | TTCGAA | 3 cut(s) | 291, 906, 7500 |
| OliI | CACNNNNGTG | 3 cut(s) | 3709, 6513, 6994 |
| PagI | TCATGA | 7 cut(s) | 1320, 1531, 6810, 6895, 6907, 7069, 7119 |
| PaqCI | CACCTGC | 1 cut(s) | 5849 |
| PasI | CCCWGGG | 1 cut(s) | 3953 |
| PciI | ACATGT | 4 cut(s) | 1807, 3262, 4413, 6993 |
| PciSI | GCTCTTC | 1 cut(s) | 3063 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3555 |
| PctI | GAATGC | 8 cut(s) | 914, 1086, 1149, 4156, 4282, 4572, 7202, 7780 |
| PdiI | GCCGGC | 1 cut(s) | 52 |
| PdmI | GAANNNNTTC | 6 cut(s) | 2334, 3180, 3206, 3276, 6396, 6821 |
| PflFI | GACNNNGTC | 1 cut(s) | 5811 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 6613 |
| PfoI | TCCNGGA | 4 cut(s) | 168, 378, 1439, 4266 |
| PinAI | ACCGGT | 1 cut(s) | 2253 |
| PmaCI | CACGTG | 1 cut(s) | 3302 |
| PmlI | CACGTG | 1 cut(s) | 3302 |
| Ppu21I | YACGTR | 2 cut(s) | 3302, 7678 |
| PpuMI | RGGWCCY | 1 cut(s) | 6274 |
| PscI | ACATGT | 4 cut(s) | 1807, 3262, 4413, 6993 |
| PshAI | GACNNNNGTC | 1 cut(s) | 973 |
| PshBI | ATTAAT | 1 cut(s) | 596 |
| PsiI | TTATAA | 3 cut(s) | 1173, 5609, 7100 |
| Psp124BI | GAGCTC | 2 cut(s) | 3158, 4063 |
| Psp1406I | AACGTT | 1 cut(s) | 2440 |
| Psp5II | RGGWCCY | 1 cut(s) | 6274 |
| Psp6I | CCWGG | 8 cut(s) | 151, 378, 485, 1439, 3952, 4016, 4266, 5155 |
| PspCI | CACGTG | 1 cut(s) | 3302 |
| PspFI | CCCAGC | 1 cut(s) | 2972 |
| PspGI | CCWGG | 8 cut(s) | 151, 378, 485, 1439, 3952, 4016, 4266, 5155 |
| PspPI | GGNCC | 7 cut(s) | 247, 1546, 1601, 2179, 3308, 6274, 7812 |
| PspPPI | RGGWCCY | 1 cut(s) | 6274 |
| PstNI | CAGNNNCTG | 5 cut(s) | 830, 2557, 3770, 6421, 6760 |
| PsyI | GACNNNGTC | 1 cut(s) | 5811 |
| PvuII | CAGCTG | 1 cut(s) | 5681 |
| RseI | CAYNNNNRTG | 7 cut(s) | 1091, 3709, 4865, 5047, 6043, 6513, 6994 |
| SacI | GAGCTC | 2 cut(s) | 3158, 4063 |
| SalI | GTCGAC | 1 cut(s) | 413 |
| SapI | GCTCTTC | 1 cut(s) | 3063 |
| Sau96I | GGNCC | 7 cut(s) | 247, 1546, 1601, 2179, 3308, 6274, 7812 |
| ScaI | AGTACT | 1 cut(s) | 4119 |
| ScrFI | CCNGG | 9 cut(s) | 153, 170, 380, 487, 1441, 3954, 4018, 4268, 5157 |
| SfuI | TTCGAA | 3 cut(s) | 291, 906, 7500 |
| SinI | GGWCC | 4 cut(s) | 247, 1601, 3308, 6274 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 1091, 3709, 4865, 5047, 6043, 6513, 6994 |
| SmlI | CTYRAG | 8 cut(s) | 335, 2699, 3013, 4062, 4435, 6719, 7433, 7709 |
| SmoI | CTYRAG | 8 cut(s) | 335, 2699, 3013, 4062, 4435, 6719, 7433, 7709 |
| SnaBI | TACGTA | 1 cut(s) | 7678 |
| SpeI | ACTAGT | 1 cut(s) | 3886 |
| SspI | AATATT | 7 cut(s) | 1666, 1989, 3223, 3984, 4144, 5961, 7405 |
| SstI | GAGCTC | 2 cut(s) | 3158, 4063 |
| StyD4I | CCNGG | 9 cut(s) | 151, 168, 378, 485, 1439, 3952, 4016, 4266, 5155 |
| StyI | CCWWGG | 5 cut(s) | 404, 885, 2395, 3436, 4639 |
| TaqII | GACCGA | 1 cut(s) | 7311 |
| TatI | WGTACW | 9 cut(s) | 952, 2474, 2691, 2773, 4117, 5731, 5953, 6187, 6723 |
| TauI | GCSGC | 6 cut(s) | 57, 60, 63, 4975, 5853, 6668 |
| TspGWI | ACGGA | 4 cut(s) | 2948, 4307, 5225, 7033 |
| Tth111I | GACNNNGTC | 1 cut(s) | 5811 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 6613 |
| Vha464I | CTTAAG | 1 cut(s) | 2699 |
| VneI | GTGCAC | 2 cut(s) | 524, 7220 |
| VpaK11BI | GGWCC | 4 cut(s) | 247, 1601, 3308, 6274 |
| VspI | ATTAAT | 1 cut(s) | 596 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 150, 760 |
| XbaI | TCTAGA | 5 cut(s) | 305, 773, 2165, 3683, 4183 |
| XceI | RCATGY | 8 cut(s) | 1811, 2999, 3266, 4417, 5052, 5351, 6997, 7372 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 4249 |
| XmiI | GTMKAC | 4 cut(s) | 414, 989, 1587, 7648 |
| XmnI | GAANNNNTTC | 6 cut(s) | 2334, 3180, 3206, 3276, 6396, 6821 |
| ZraI | GACGTC | 1 cut(s) | 7646 |
| ZrmI | AGTACT | 1 cut(s) | 4119 |
| Zsp2I | ATGCAT | 3 cut(s) | 3298, 4009, 4384 |