Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0010584

Physical Location & Seq

Genomic Coordinates Reverse (-)

7640466 .. 7641467

Gene Structure 1002 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G099400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 900 bp

AACAAGAAATACAAGACAAAAGAGGAGGGATGCTTCTTGAAGAATGGAGCTGCCATTTTAGAACAGCTTATACATTCTTTCTATGGGAATTGTAATCCGATTCGGATGTACTCCAAAGAAGAGCTCAAGAAAGCAACAAATGATTATTGCTGGGATGGAATGGCACATCAAGATTGGAACTCTCGATTGTACAAAGGAGTTCATGAAGAGCATGGAATTTTGGTGAAAAAGTTTGAAGCAGACTCAAGTAGTTACATGGATCCTCTAGAACTGATTACAAATGAAGCTGCAATAGCCTCGAACATGAGCAAGCACAAGAATGTTTTGAAGCTCTTGGGATGCTGCCTCGAGTCTGAGTTGCCTACGCTAGTTTATGAATTCCCAGCAAAAGGAAACCTCTCACACCACATCTATGGAGATGGCCAATCACTACAATGGCAGATTAGGTTAAAGATTGGAATTGAAGTAGCAGATGCAGTTGCCTATCTCCACTATGGCATGCCGAAGATGATCATCCATCGAGATATAAAGGCTGGACATATCTTCTTAGACCAAGACTATGTTGCAAAGCTGTCTGAGTTCCGAACCTCAGTGCCAATTCCGTTGGGTAAAACTCATGTGGATGTTGAAGTAATTACCGGGACTCATAGGTGCCTGCCTCCTGAATATGCTATATCTGGACGTACTTCAGAAAAGAGTGATGTCCATAGCTTCGGAATTCTGTTATGTGAGATCTTCGCAGGGAAGAGATGGGATAAGGCCAATGTCTTGGAAGAAGAAAACAAGAAGCAAGTAGTGGAATGTGCTAAGCTCATAGAGAGGTGTCTCAAAACAAATCCGGATGACAGGCCCATCATGACAGAGGTAGCACTATCACTCAGATTGATCAAAAGCTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr

Protein Analysis

300

Amino Acids

33.96

Weight (kDa)

6.96

Isoelectric Point (pI)

48.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010584)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g28540
malus_domestica	MD17G1223800.v1.1
prunus_persica	Prupe.3G099400_v2.0.a1 Prupe.3G099500_v2.0.a1
pyrus_communis	pycom17g22760 pycom17g22770
rosa_chinensis	RchiOBHm_Chr2g0132861
rosa_laevigata	RLG00000019286
rosa_multiflora	Rmu_co8384525.1_g000001 Rmu_sc0023498.1_g000001 Rmu_sc0023498.1_g000002
rosa_rugosa	Rorug02G0307900
rosa_samantha	Rh2AG360300 Rh2AG360500 Rh2BG366300 Rh2BG366400 Rh2CG343700 Rh2DG383300 Rh2DG383400
rosa_wichuraiana	Rw2G029300 Rw2G029310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	898
AccB1I	GGYRCC	1 cut(s)	651
AccIII	TCCGGA	1 cut(s)	838
AclWI	GGATC	2 cut(s)	254, 267
AcoI	YGGCCR	1 cut(s)	421
AcsI	RAATTY	3 cut(s)	216, 377, 717
AcuI	CTGAAG	1 cut(s)	672
AfaI	GTAC	3 cut(s)	110, 191, 685
AfiI	CCNNNNNNNGG	1 cut(s)	389
AgsI	TTSAA	5 cut(s)	40, 236, 328, 464, 629
AluBI	AGCT	9 cut(s)	50, 67, 124, 287, 331, 571, 711, 811, 894
AluI	AGCT	9 cut(s)	50, 67, 124, 287, 331, 571, 711, 811, 894
Alw21I	GWGCWC	1 cut(s)	126
Alw26I	GTCTC	1 cut(s)	830
AlwI	GGATC	2 cut(s)	254, 267
Ama87I	CYCGRG	1 cut(s)	347
Aor13HI	TCCGGA	1 cut(s)	838
AoxI	GGCC	3 cut(s)	421, 759, 848
ApeKI	GCWGC	3 cut(s)	50, 287, 342
ApoI	RAATTY	3 cut(s)	216, 377, 717
AspS9I	GGNCC	1 cut(s)	849
AsuC2I	CCSGG	1 cut(s)	640
AsuHPI	GGTGA	1 cut(s)	235
AvaI	CYCGRG	1 cut(s)	347
BalI	TGGCCA	1 cut(s)	423
BamHI	GGATCC	1 cut(s)	259
BanI	GGYRCC	1 cut(s)	651
BanII	GRGCYC	1 cut(s)	126
Bbv12I	GWGCWC	1 cut(s)	126
BbvI	GCAGC	3 cut(s)	37, 274, 329
BccI	CCATC	5 cut(s)	149, 413, 525, 744, 860
BcgI	CGANNNNNNTGC	2 cut(s)	279, 313
BclI	TGATCA	2 cut(s)	510, 885
BcnI	CCSGG	1 cut(s)	640
BcoDI	GTCTC	1 cut(s)	830
BfaI	CTAG	2 cut(s)	266, 368
BglII	AGATCT	1 cut(s)	732
BisI	GCNGC	3 cut(s)	51, 288, 343
BlpI	GCTNAGC	1 cut(s)	807
BlsI	GCNGC	3 cut(s)	52, 289, 344
Bme1390I	CCNGG	1 cut(s)	640
BmeT110I	CYCGRG	1 cut(s)	347
BmgT120I	GGNCC	1 cut(s)	849
BmiI	GGNNCC	2 cut(s)	261, 653
BmrFI	CCNGG	1 cut(s)	640
BmsI	GCATC	3 cut(s)	20, 329, 463
Bpu1102I	GCTNAGC	1 cut(s)	807
BpuEI	CTTGAG	2 cut(s)	110, 229
BpuMI	CCSGG	1 cut(s)	640
BsaBI	GATNNNNATC	1 cut(s)	512
BsaWI	WCCGGW	1 cut(s)	838
Bsc4I	CCNNNNNNNGG	1 cut(s)	389
Bse8I	GATNNNNATC	1 cut(s)	512
BseAI	TCCGGA	1 cut(s)	838
BseGI	GGATG	7 cut(s)	35, 111, 160, 344, 513, 628, 847
BseJI	GATNNNNATC	1 cut(s)	512
BseLI	CCNNNNNNNGG	1 cut(s)	389
BseMII	CTCAG	4 cut(s)	345, 567, 603, 892
BseRI	GAGGAG	1 cut(s)	38
BseXI	GCAGC	3 cut(s)	37, 274, 329
BseYI	CCCAGC	2 cut(s)	150, 382
BshFI	GGCC	3 cut(s)	423, 761, 850
BshNI	GGYRCC	1 cut(s)	651
BsiHKAI	GWGCWC	1 cut(s)	126
BsiHKCI	CYCGRG	1 cut(s)	347
BsiSI	CCGG	2 cut(s)	639, 839
BslFI	GGGAC	1 cut(s)	655
BslI	CCNNNNNNNGG	1 cut(s)	389
BsmAI	GTCTC	1 cut(s)	830
BsmFI	GGGAC	1 cut(s)	655
BsnI	GGCC	3 cut(s)	423, 761, 850
BsoBI	CYCGRG	1 cut(s)	347
Bsp1286I	GDGCHC	1 cut(s)	126
Bsp13I	TCCGGA	1 cut(s)	838
Bsp1407I	TGTACA	1 cut(s)	189
Bsp143I	GATC	4 cut(s)	259, 510, 732, 885
Bsp1720I	GCTNAGC	1 cut(s)	807
BspANI	GGCC	3 cut(s)	423, 761, 850
BspCNI	CTCAG	4 cut(s)	346, 568, 602, 891
BspEI	TCCGGA	1 cut(s)	838
BspHI	TCATGA	2 cut(s)	202, 855
BspLI	GGNNCC	2 cut(s)	261, 653
BspPI	GGATC	2 cut(s)	254, 267
BspQI	GCTCTTC	2 cut(s)	114, 201
BspT107I	GGYRCC	1 cut(s)	651
BsrGI	TGTACA	1 cut(s)	189
BssMI	GATC	4 cut(s)	259, 510, 732, 885
Bst6I	CTCTTC	3 cut(s)	114, 201, 740
BstAUI	TGTACA	1 cut(s)	189
BstC8I	GCNNGC	3 cut(s)	311, 500, 656
BstDEI	CTNAG	6 cut(s)	354, 547, 576, 589, 807, 878
BstF5I	GGATG	7 cut(s)	35, 111, 160, 344, 513, 628, 847
BstKTI	GATC	4 cut(s)	262, 513, 735, 888
BstMAI	GTCTC	1 cut(s)	830
BstMBI	GATC	4 cut(s)	259, 510, 732, 885
BstMWI	GCNNNNNNNGC	1 cut(s)	293
BstNSI	RCATGY	1 cut(s)	502
BstSCI	CCNGG	1 cut(s)	638
BstV1I	GCAGC	3 cut(s)	37, 274, 329
BstX2I	RGATCY	2 cut(s)	259, 732
BstXI	CCANNNNNNTGG	2 cut(s)	413, 769
BstYI	RGATCY	2 cut(s)	259, 732
BsuRI	GGCC	3 cut(s)	423, 761, 850
BtsCI	GGATG	7 cut(s)	35, 111, 160, 344, 513, 628, 847
BtsIMutI	CAGTG	1 cut(s)	597
Cac8I	GCNNGC	3 cut(s)	311, 500, 656
CciI	TCATGA	2 cut(s)	202, 855
Cfr13I	GGNCC	1 cut(s)	849
Csp6I	GTAC	3 cut(s)	109, 190, 684
CviAII	CATG	7 cut(s)	203, 212, 256, 304, 499, 617, 856
CviQI	GTAC	3 cut(s)	109, 190, 684
DdeI	CTNAG	6 cut(s)	354, 547, 576, 589, 807, 878
DpnI	GATC	4 cut(s)	261, 512, 734, 887
DpnII	GATC	4 cut(s)	259, 510, 732, 885
EaeI	YGGCCR	1 cut(s)	421
Eam1104I	CTCTTC	3 cut(s)	114, 201, 740
EarI	CTCTTC	3 cut(s)	114, 201, 740
Ecl136II	GAGCTC	1 cut(s)	124
Eco24I	GRGCYC	1 cut(s)	126
Eco53kI	GAGCTC	1 cut(s)	124
Eco57I	CTGAAG	1 cut(s)	672
Eco88I	CYCGRG	1 cut(s)	347
EcoICRI	GAGCTC	1 cut(s)	124
EcoRI	GAATTC	2 cut(s)	377, 717
EcoT38I	GRGCYC	1 cut(s)	126
FaeI	CATG	7 cut(s)	206, 215, 259, 307, 502, 620, 859
FaqI	GGGAC	1 cut(s)	655
FatI	CATG	7 cut(s)	202, 211, 255, 303, 498, 616, 855
FbaI	TGATCA	2 cut(s)	510, 885
Fnu4HI	GCNGC	3 cut(s)	51, 288, 343
FokI	GGATG	7 cut(s)	42, 118, 167, 351, 500, 635, 854
FriOI	GRGCYC	1 cut(s)	126
Fsp4HI	GCNGC	3 cut(s)	51, 288, 343
FspBI	CTAG	2 cut(s)	266, 368
GluI	GCNGC	3 cut(s)	51, 288, 343
GsaI	CCCAGC	2 cut(s)	154, 386
HaeIII	GGCC	3 cut(s)	423, 761, 850
HapII	CCGG	2 cut(s)	639, 839
Hin1II	CATG	7 cut(s)	206, 215, 259, 307, 502, 620, 859
HindIII	AAGCTT	1 cut(s)	892
HinfI	GANTC	4 cut(s)	100, 242, 350, 643
HpaII	CCGG	2 cut(s)	639, 839
HphI	GGTGA	1 cut(s)	235
Hpy188I	TCNGA	8 cut(s)	99, 105, 355, 577, 584, 691, 716, 881
HpyCH4IV	ACGT	1 cut(s)	682
HpyCH4V	TGCA	3 cut(s)	290, 476, 566
HpyF10VI	GCNNNNNNNGC	1 cut(s)	293
HpyF3I	CTNAG	6 cut(s)	354, 547, 576, 589, 807, 878
HpySE526I	ACGT	1 cut(s)	682
Hsp92II	CATG	7 cut(s)	206, 215, 259, 307, 502, 620, 859
Kpn2I	TCCGGA	1 cut(s)	838
Ksp22I	TGATCA	2 cut(s)	510, 885
Kzo9I	GATC	4 cut(s)	259, 510, 732, 885
LguI	GCTCTTC	2 cut(s)	114, 201
LmnI	GCTCC	1 cut(s)	47
Lsp1109I	GCAGC	3 cut(s)	37, 274, 329
LweI	GCATC	3 cut(s)	20, 329, 463
MaeI	CTAG	2 cut(s)	266, 368
MaeII	ACGT	1 cut(s)	682
MaeIII	GTNAC	1 cut(s)	251
MalI	GATC	4 cut(s)	261, 512, 734, 887
MboI	GATC	4 cut(s)	259, 510, 732, 885
MboII	GAAGA	9 cut(s)	52, 131, 218, 517, 535, 727, 757, 785, 788
MflI	RGATCY	2 cut(s)	259, 732
MhlI	GDGCHC	1 cut(s)	126
MlsI	TGGCCA	1 cut(s)	423
MluCI	AATT	7 cut(s)	88, 216, 377, 459, 597, 633, 717
MluNI	TGGCCA	1 cut(s)	423
MlyI	GAGTC	3 cut(s)	236, 359, 637
Mox20I	TGGCCA	1 cut(s)	423
MroI	TCCGGA	1 cut(s)	838
MscI	TGGCCA	1 cut(s)	423
MseI	TTAA	1 cut(s)	449
MslI	CAYNNNNRTG	4 cut(s)	318, 411, 433, 621
Msp20I	TGGCCA	1 cut(s)	423
MspI	CCGG	2 cut(s)	639, 839
MspR9I	CCNGG	1 cut(s)	640
MwoI	GCNNNNNNNGC	1 cut(s)	293
NciI	CCSGG	1 cut(s)	640
NdeII	GATC	4 cut(s)	259, 510, 732, 885
NlaIII	CATG	7 cut(s)	206, 215, 259, 307, 502, 620, 859
NlaIV	GGNNCC	2 cut(s)	261, 653
NspI	RCATGY	1 cut(s)	502
PaeI	GCATGC	1 cut(s)	502
PaeR7I	CTCGAG	1 cut(s)	347
PagI	TCATGA	2 cut(s)	202, 855
PciSI	GCTCTTC	2 cut(s)	114, 201
PfeI	GAWTC	1 cut(s)	100
PkrI	GCNGC	3 cut(s)	52, 289, 344
PleI	GAGTC	3 cut(s)	236, 358, 637
PpsI	GAGTC	3 cut(s)	236, 358, 637
PsiI	TTATAA	1 cut(s)	898
Psp124BI	GAGCTC	1 cut(s)	126
PspFI	CCCAGC	2 cut(s)	150, 382
PspN4I	GGNNCC	2 cut(s)	261, 653
PspPI	GGNCC	1 cut(s)	849
PspXI	VCTCGAGB	1 cut(s)	347
PsrI	GAACNNNNNNTAC	2 cut(s)	54, 86
PsuI	RGATCY	2 cut(s)	259, 732
RsaI	GTAC	3 cut(s)	110, 191, 685
RsaNI	GTAC	3 cut(s)	109, 190, 684
RseI	CAYNNNNRTG	4 cut(s)	318, 411, 433, 621
SacI	GAGCTC	1 cut(s)	126
SapI	GCTCTTC	2 cut(s)	114, 201
SaqAI	TTAA	1 cut(s)	449
SatI	GCNGC	3 cut(s)	51, 288, 343
Sau3AI	GATC	4 cut(s)	259, 510, 732, 885
Sau96I	GGNCC	1 cut(s)	849
SchI	GAGTC	3 cut(s)	236, 359, 637
ScrFI	CCNGG	1 cut(s)	640
SduI	GDGCHC	1 cut(s)	126
SfaNI	GCATC	3 cut(s)	20, 329, 463
Sfr274I	CTCGAG	1 cut(s)	347
SlaI	CTCGAG	1 cut(s)	347
SmiMI	CAYNNNNRTG	4 cut(s)	318, 411, 433, 621
SmlI	CTYRAG	3 cut(s)	125, 244, 347
SmoI	CTYRAG	3 cut(s)	125, 244, 347
SphI	GCATGC	1 cut(s)	502
Sse9I	AATT	7 cut(s)	88, 216, 377, 459, 597, 633, 717
SspMI	CTAG	2 cut(s)	266, 368
SstI	GAGCTC	1 cut(s)	126
StyD4I	CCNGG	1 cut(s)	638
TaiI	ACGT	1 cut(s)	685
TaqI	TCGA	4 cut(s)	184, 299, 348, 520
TasI	AATT	7 cut(s)	88, 216, 377, 459, 597, 633, 717
TatI	WGTACW	2 cut(s)	108, 189
TfiI	GAWTC	1 cut(s)	100
Tru1I	TTAA	1 cut(s)	449
Tru9I	TTAA	1 cut(s)	449
TscAI	CASTG	1 cut(s)	597
TseI	GCWGC	3 cut(s)	50, 287, 342
TspDTI	ATGAA	4 cut(s)	191, 219, 297, 390
TspGWI	ACGGA	1 cut(s)	591
TspRI	CASTG	1 cut(s)	597
XapI	RAATTY	3 cut(s)	216, 377, 717
XbaI	TCTAGA	1 cut(s)	265
XceI	RCATGY	1 cut(s)	502
XhoI	CTCGAG	1 cut(s)	347
XspI	CTAG	2 cut(s)	266, 368

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.