Prupe.3G132600_v2.0.a1

Ankyrin repeat domain-containing protein EMB506

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
13744196 .. 13748777
4582 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G132600.1

Sequence Viewer

Length: 1032 bp
ATGGGCACGGTTTCTATCTCACCGTTCTCAGCTCCACATTCACTCTCTGCCCCAAAAGGTTACCATTCCTTTGCAATTTTGAGCTCTTTCAAGCATTTCACGGCCAGAGAAAATAGCCATCAATTACAATTGCTTCATAACACCAATGTTTTGAAAGCGTATAGTATAAGGAGGGGAAGCTTCAGCTTCCATGGTGCTGAGAAGCACTCCAAGTTGAGAAATTTTTTGGTTGAGTCAAACCCAACATCTTCATCTTCATTACAGACCCACATGGGAACGTGGGAAGATCCTGACGATGGCAGCGGCAGTGAAGATGAGGAAGAAACAGAAGAACATGACTTGGGTTTCCAAAGTGAATGGGAAGAAGAAGGAGAAGAAGAGAAAGGTGCTCCAGCTGCTGCTTCTGTTGACAGGTCCACAACAAACAAGTATGAAGAGGAACTTGTGAAAGAGGTGGAACAGCTCTTGGAGCAAGAAGAAAAAGCAATTTTGCAAAAGCATGCGACTCCCTATATGGAGAAAATATCAACTGCAAAATGGAATCCGGTACATACTCTTGCACTATCGGGGTTGGTAACTTTCATGGACAAGTTACTTGACGATGGTGTAGATATTAATGTTGTTGATAAGGATGGCTTAACTGCTCTTCATACTGCAATCATAGCCAAAAAGGAAGCTGTTATTAGTCATCTTCTAAGAAAAGGTGCAAGTCCTCATATCAGAGATGGGGATGGTGCTACGCCACTTCATTATGCAGTACAAGTAGGCACCAAGCGGATTGTCAAGTTATTGATCAAATATAAAGTTGATGTCAATGTTGCAGATAATGATGGATGGACTCCGTTGCATATTGCTGTACAAAGTAGAAATAGAGATATTGCAAAAATTTTGTTAGTCAATGGTGCAGATAAGAGTAGAAGAAATGAGGATGGCAGAACTCCCCTAGATCTGGGCTTATGTTATGGGAAAGACTTCAAGTCCTATGACCTCACTAAGCTACTGAAGACAGTGCCAATGGACAGAGAGTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

344

Amino Acids

38.2

Weight (kDa)

5.74

Isoelectric Point (pI)

41.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011420)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 767
AciI CCGC 2 cut(s) 303, 775
AclWI GGATC 1 cut(s) 281
AcoI YGGCCR 1 cut(s) 102
AcsI RAATTY 2 cut(s) 220, 885
AcuI CTGAAG 2 cut(s) 166, 1022
AfaI GTAC 3 cut(s) 549, 759, 858
AfiI CCNNNNNNNGG 2 cut(s) 296, 949
AgsI TTSAA 3 cut(s) 91, 154, 976
AhdI GACNNNNNGTC 1 cut(s) 976
AluBI AGCT 8 cut(s) 32, 84, 180, 186, 395, 463, 677, 997
AluI AGCT 8 cut(s) 32, 84, 180, 186, 395, 463, 677, 997
Alw21I GWGCWC 2 cut(s) 86, 391
AlwI GGATC 1 cut(s) 281
AlwNI CAGNNNCTG 1 cut(s) 398
AoxI GGCC 1 cut(s) 102
ApeKI GCWGC 3 cut(s) 300, 395, 398
ApoI RAATTY 2 cut(s) 220, 885
AseI ATTAAT 1 cut(s) 615
Asp700I GAANNNNTTC 1 cut(s) 971
AspS9I GGNCC 1 cut(s) 414
AsuHPI GGTGA 1 cut(s) 12
AvaII GGWCC 1 cut(s) 414
BaeGI GKGCMC 1 cut(s) 8
BanI GGYRCC 1 cut(s) 767
BanII GRGCYC 1 cut(s) 86
BbsI GAAGAC 1 cut(s) 1010
Bbv12I GWGCWC 2 cut(s) 86, 391
BbvI GCAGC 3 cut(s) 312, 382, 385
BccI CCATC 9 cut(s) 126, 290, 596, 626, 719, 725, 824, 828, 923
BceAI ACGGC 1 cut(s) 117
BclI TGATCA 1 cut(s) 792
BfaI CTAG 1 cut(s) 944
BglII AGATCT 1 cut(s) 946
BisI GCNGC 4 cut(s) 301, 304, 396, 399
BlsI GCNGC 4 cut(s) 302, 305, 397, 400
Bme18I GGWCC 1 cut(s) 414
BmeRI GACNNNNNGTC 1 cut(s) 976
BmgT120I GGNCC 1 cut(s) 414
BmiI GGNNCC 1 cut(s) 769
BpiI GAAGAC 1 cut(s) 1010
BplI GAGNNNNNCTC 2 cut(s) 191, 223
BpmI CTGGAG 1 cut(s) 375
BsaJI CCNNGG 1 cut(s) 190
BsaWI WCCGGW 1 cut(s) 544
Bsc4I CCNNNNNNNGG 2 cut(s) 296, 949
BseDI CCNNGG 1 cut(s) 190
BseGI GGATG 4 cut(s) 637, 736, 839, 934
BseLI CCNNNNNNNGG 2 cut(s) 296, 949
BseMII CTCAG 2 cut(s) 42, 189
BseSI GKGCMC 1 cut(s) 8
BseXI GCAGC 3 cut(s) 312, 382, 385
BsgI GTGCAG 1 cut(s) 924
BshFI GGCC 1 cut(s) 104
BshNI GGYRCC 1 cut(s) 767
BsiHKAI GWGCWC 2 cut(s) 86, 391
BsiSI CCGG 1 cut(s) 545
BslI CCNNNNNNNGG 2 cut(s) 296, 949
BsnI GGCC 1 cut(s) 104
Bsp1286I GDGCHC 3 cut(s) 8, 86, 391
Bsp1407I TGTACA 1 cut(s) 856
Bsp143I GATC 3 cut(s) 286, 792, 946
Bsp19I CCATGG 1 cut(s) 190
BspACI CCGC 2 cut(s) 303, 775
BspANI GGCC 1 cut(s) 104
BspCNI CTCAG 2 cut(s) 41, 190
BspLI GGNNCC 1 cut(s) 769
BspPI GGATC 1 cut(s) 281
BspQI GCTCTTC 1 cut(s) 651
BspT107I GGYRCC 1 cut(s) 767
BsrGI TGTACA 1 cut(s) 856
BssECI CCNNGG 1 cut(s) 190
BssMI GATC 3 cut(s) 286, 792, 946
BssT1I CCWWGG 1 cut(s) 190
Bst4CI ACNGT 3 cut(s) 10, 24, 1009
Bst6I CTCTTC 3 cut(s) 372, 429, 651
BstAUI TGTACA 1 cut(s) 856
BstC8I GCNNGC 1 cut(s) 501
BstDEI CTNAG 4 cut(s) 28, 198, 695, 993
BstDSI CCRYGG 1 cut(s) 190
BstEII GGTNACC 1 cut(s) 59
BstF5I GGATG 4 cut(s) 637, 736, 839, 934
BstKTI GATC 3 cut(s) 289, 795, 949
BstMBI GATC 3 cut(s) 286, 792, 946
BstMWI GCNNNNNNNGC 3 cut(s) 395, 469, 662
BstNSI RCATGY 1 cut(s) 503
BstPI GGTNACC 1 cut(s) 59
BstSLI GKGCMC 1 cut(s) 8
BstV1I GCAGC 3 cut(s) 312, 382, 385
BstV2I GAAGAC 1 cut(s) 1010
BstX2I RGATCY 2 cut(s) 286, 946
BstYI RGATCY 2 cut(s) 286, 946
BsuRI GGCC 1 cut(s) 104
BtgI CCRYGG 1 cut(s) 190
BtsCI GGATG 4 cut(s) 637, 736, 839, 934
BtsI GCAGTG 1 cut(s) 313
BtsIMutI CAGTG 2 cut(s) 313, 1014
Cac8I GCNNGC 1 cut(s) 501
CaiI CAGNNNCTG 1 cut(s) 398
Cfr13I GGNCC 1 cut(s) 414
Csp6I GTAC 3 cut(s) 548, 758, 857
CviAII CATG 5 cut(s) 191, 271, 335, 500, 583
CviQI GTAC 3 cut(s) 548, 758, 857
DdeI CTNAG 4 cut(s) 28, 198, 695, 993
DpnI GATC 3 cut(s) 288, 794, 948
DpnII GATC 3 cut(s) 286, 792, 946
DriI GACNNNNNGTC 1 cut(s) 976
EaeI YGGCCR 1 cut(s) 102
Eam1104I CTCTTC 3 cut(s) 372, 429, 651
Eam1105I GACNNNNNGTC 1 cut(s) 976
EarI CTCTTC 3 cut(s) 372, 429, 651
Ecl136II GAGCTC 1 cut(s) 84
Eco130I CCWWGG 1 cut(s) 190
Eco24I GRGCYC 1 cut(s) 86
Eco47I GGWCC 1 cut(s) 414
Eco53kI GAGCTC 1 cut(s) 84
Eco57I CTGAAG 2 cut(s) 166, 1022
Eco91I GGTNACC 1 cut(s) 59
EcoICRI GAGCTC 1 cut(s) 84
EcoO65I GGTNACC 1 cut(s) 59
EcoT14I CCWWGG 1 cut(s) 190
EcoT38I GRGCYC 1 cut(s) 86
ErhI CCWWGG 1 cut(s) 190
FaeI CATG 5 cut(s) 194, 274, 338, 503, 586
FalI AAGNNNNNCTT 4 cut(s) 426, 458, 620, 652
FatI CATG 5 cut(s) 190, 270, 334, 499, 582
FbaI TGATCA 1 cut(s) 792
Fnu4HI GCNGC 4 cut(s) 301, 304, 396, 399
FokI GGATG 4 cut(s) 644, 743, 846, 941
FriOI GRGCYC 1 cut(s) 86
Fsp4HI GCNGC 4 cut(s) 301, 304, 396, 399
FspBI CTAG 1 cut(s) 944
GluI GCNGC 4 cut(s) 301, 304, 396, 399
GsuI CTGGAG 1 cut(s) 375
HaeIII GGCC 1 cut(s) 104
HapII CCGG 1 cut(s) 545
Hin1II CATG 5 cut(s) 194, 274, 338, 503, 586
HincII GTYRAC 1 cut(s) 409
HindII GTYRAC 1 cut(s) 409
HindIII AAGCTT 1 cut(s) 178
HinfI GANTC 4 cut(s) 233, 505, 541, 838
HpaII CCGG 1 cut(s) 545
HphI GGTGA 1 cut(s) 12
Hpy166II GTNNAC 2 cut(s) 409, 417
Hpy188I TCNGA 1 cut(s) 722
Hpy188III TCNNGA 1 cut(s) 290
Hpy8I GTNNAC 2 cut(s) 409, 417
HpyAV CCTTC 1 cut(s) 362
HpyCH4III ACNGT 3 cut(s) 10, 24, 1009
HpyCH4IV ACGT 1 cut(s) 278
HpyF10VI GCNNNNNNNGC 3 cut(s) 395, 469, 662
HpyF3I CTNAG 4 cut(s) 28, 198, 695, 993
HpySE526I ACGT 1 cut(s) 278
Hsp92II CATG 5 cut(s) 194, 274, 338, 503, 586
Ksp22I TGATCA 1 cut(s) 792
Kzo9I GATC 3 cut(s) 286, 792, 946
LguI GCTCTTC 1 cut(s) 651
LmnI GCTCC 3 cut(s) 37, 394, 469
LpnPI CCDG 6 cut(s) 118, 303, 397, 405, 558, 935
Lsp1109I GCAGC 3 cut(s) 312, 382, 385
MaeI CTAG 1 cut(s) 944
MaeII ACGT 1 cut(s) 278
MaeIII GTNAC 3 cut(s) 59, 574, 591
MalI GATC 3 cut(s) 288, 794, 948
MboI GATC 3 cut(s) 286, 792, 946
MfeI CAATTG 1 cut(s) 128
MflI RGATCY 2 cut(s) 286, 946
MhlI GDGCHC 3 cut(s) 8, 86, 391
MluCI AATT 6 cut(s) 75, 122, 128, 220, 486, 885
MlyI GAGTC 3 cut(s) 242, 499, 832
MnlI CCTC 7 cut(s) 165, 310, 430, 445, 723, 919, 998
MroXI GAANNNNTTC 1 cut(s) 971
MseI TTAA 2 cut(s) 615, 638
MspA1I CMGCKG 2 cut(s) 303, 395
MspI CCGG 1 cut(s) 545
MunI CAATTG 1 cut(s) 128
MwoI GCNNNNNNNGC 3 cut(s) 395, 469, 662
NcoI CCATGG 1 cut(s) 190
NdeII GATC 3 cut(s) 286, 792, 946
NlaIII CATG 5 cut(s) 194, 274, 338, 503, 586
NlaIV GGNNCC 1 cut(s) 769
NspI RCATGY 1 cut(s) 503
PaeI GCATGC 1 cut(s) 503
PciSI GCTCTTC 1 cut(s) 651
PdmI GAANNNNTTC 1 cut(s) 971
PfeI GAWTC 1 cut(s) 541
PkrI GCNGC 4 cut(s) 302, 305, 397, 400
PleI GAGTC 3 cut(s) 241, 499, 832
PpsI GAGTC 3 cut(s) 241, 499, 832
PshBI ATTAAT 1 cut(s) 615
Psp124BI GAGCTC 1 cut(s) 86
PspEI GGTNACC 1 cut(s) 59
PspN4I GGNNCC 1 cut(s) 769
PspPI GGNCC 1 cut(s) 414
PstNI CAGNNNCTG 1 cut(s) 398
PsuI RGATCY 2 cut(s) 286, 946
PvuII CAGCTG 1 cut(s) 395
RsaI GTAC 3 cut(s) 549, 759, 858
RsaNI GTAC 3 cut(s) 548, 758, 857
SacI GAGCTC 1 cut(s) 86
SapI GCTCTTC 1 cut(s) 651
SaqAI TTAA 2 cut(s) 615, 638
SatI GCNGC 4 cut(s) 301, 304, 396, 399
Sau3AI GATC 3 cut(s) 286, 792, 946
Sau96I GGNCC 1 cut(s) 414
SchI GAGTC 3 cut(s) 242, 499, 832
SduI GDGCHC 3 cut(s) 8, 86, 391
SinI GGWCC 1 cut(s) 414
SphI GCATGC 1 cut(s) 503
Sse9I AATT 6 cut(s) 75, 122, 128, 220, 486, 885
SsiI CCGC 2 cut(s) 303, 775
SspMI CTAG 1 cut(s) 944
SstI GAGCTC 1 cut(s) 86
StyI CCWWGG 1 cut(s) 190
TaaI ACNGT 3 cut(s) 10, 24, 1009
TaiI ACGT 1 cut(s) 281
TasI AATT 6 cut(s) 75, 122, 128, 220, 486, 885
TatI WGTACW 2 cut(s) 757, 856
TauI GCSGC 1 cut(s) 306
TfiI GAWTC 1 cut(s) 541
Tru1I TTAA 2 cut(s) 615, 638
Tru9I TTAA 2 cut(s) 615, 638
TscAI CASTG 2 cut(s) 313, 1014
TseI GCWGC 3 cut(s) 300, 395, 398
TspDTI ATGAA 7 cut(s) 125, 240, 246, 447, 571, 638, 737
TspGWI ACGGA 1 cut(s) 831
TspRI CASTG 2 cut(s) 313, 1014
VpaK11BI GGWCC 1 cut(s) 414
VspI ATTAAT 1 cut(s) 615
XapI RAATTY 2 cut(s) 220, 885
XceI RCATGY 1 cut(s) 503
XmnI GAANNNNTTC 1 cut(s) 971
XspI CTAG 1 cut(s) 944
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.