Prupe.3G150700_v2.0.a1

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0017270
Physical Location & Seq
Reverse (-)
16465867 .. 16470636
4770 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G150700.1

Sequence Viewer

Length: 1209 bp
ATGAAGACGATGGGTGAGATTCTGAGTGCCTACTGCTCGGATGATTTCGATATGCAGCTGATAGGGAAGTTCTTGAGTTTTGCTTCAAGAGGTGACAGAGTTGGACTGAACCAGATGTTGATCAAAGGCATATCTCCTGATGTGCAAGACTATGACAACAGGACTGCTCTGCATCTCGCCGCAAGCGAGGGTCACACTCCCATTGTCGAGCTTCTTTTGTGCTACAAGGCAAATGTTAATCTCAAAGATCGATGGAAACGGACTCCCCTGACAGATGCGAGACTCTATGGACATCGAGACATATGCAGGATTCTTGAAGTAAATGGAGGCAATGACCTTACCAATGATCAATTCACGGTTAGACATGAGCAAGAAGATTCGAATGATGTGAAGTTTGACATGTCAGAATTAAAAACAGAGCATTCATCAACCATTCAGCAGGGCTCATTCAGTGAATCCGAAAAGGTCAAGTGGCGTGGAACCTGGGTCGTCAAAACTGTTATAAAGAGACACATATGCAATCCTGTAAAAATGATTCTCTCTGCTAAGGACAACACTCGCCTCCGGGAACTTAGACATCCCAATATTTTGCAATTTCTCGGTTCAATTGTGCAGCAAGAAGAGATGGTTCTGATTACTGAGTATCTACCAAAAGGTAACCTGGAAGATATTTTGAGGCAGAGAGCTCGACTTGACGTGCATACTGCTCTACGCTATGCACTTGACATTGCTAGGGGAATGAACTATCTTCATGAGCACAAGCCCTGCCCTATAGTTCACAACCATTTGGATACCAGAAACTTGTTGCAGGATGAAGGCGGACACTTGAAGATCGGCGAGTATTGGGTTCAAATGCTGTATGAGCAAATTAACCCAGATCAAAATGGGAAAAGAAGTGGCAATCCCGGTAACAGTACCAACATATTAGATGGCACCAAGAAAGATATTCGTACATTTGGATTCATATATTATCAGATGCTAGAAGGAAATCACTTCATGACCGACACGAACTCTGACTTCATCCATCAGGAACCGGTCGATTTTAAGCCGAAATTCCACTTAAGTCGATGTTCATACAGAATTCAACAGTTGATAGAGGGTTGTACAAGTAATGATCCTTCCGAAATACCCACATTTGAAAGTGTCATAGGAACTCTAGAAGAGGAATCAGCGTCTTTAGGGAGACCTGCATGCCCAGTTATTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001666 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004712 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006082 GO:0006464 GO:0006468 GO:0006629 GO:0006720 GO:0006721 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009628 GO:0009685 GO:0009686 GO:0009719 GO:0009723 GO:0009725 GO:0009743 GO:0009744 GO:0009746 GO:0009750 GO:0009756 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010104 GO:0010105 GO:0010182 GO:0010646 GO:0010648 GO:0010817 GO:0012505 GO:0016020 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019752 GO:0023051 GO:0023052 GO:0023057 GO:0031984 GO:0034284 GO:0034285 GO:0036211 GO:0036293 GO:0040034 GO:0042175 GO:0042221 GO:0042445 GO:0042446 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046777 GO:0048506 GO:0048509 GO:0048510 GO:0048519 GO:0048523 GO:0048580 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051302 GO:0051716 GO:0065007 GO:0065008 GO:0070297 GO:0070298 GO:0070482 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071322 GO:0071704 GO:0098827 GO:0140096 GO:1901564 GO:1901576 GO:1901700 GO:1901701 GO:1902531 GO:1902532 GO:2000026 GO:2000035 GO:2000069 GO:2000280
KEGG Pathways
Metabolic & Signaling
ko03320 ko04360 ko04510 ko05100 ko05213 map03320 map04360 map04510 map05100 map05213
Pfam Domains
Protein Families
Ank_2 Ank_4 Ank_5 Pkinase_Tyr

Protein Analysis

403

Amino Acids

46.05

Weight (kDa)

6.07

Isoelectric Point (pI)

42.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g27960
malus_domestica MD00G1053900.v1.1
prunus_persica Prupe.3G150700_v2.0.a1
pyrus_communis pycom17g25570
rosa_chinensis RchiOBHm_Chr5g0011771
rosa_laevigata RLG00000031861
rosa_roxburghii Rroxscaffold_1G00064780
rosa_rugosa Rorug04G0458900
rosa_samantha Rh5AG090600 Rh5BG086100 Rh5CG099900 Rh5DG086300
rosa_wichuraiana Rw5G007910

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 503
Acc36I ACCTGC 1 cut(s) 1195
AccB1I GGYRCC 1 cut(s) 932
AciI CCGC 2 cut(s) 180, 819
AclWI GGATC 1 cut(s) 1109
AcsI RAATTY 2 cut(s) 1052, 1080
AfaI GTAC 3 cut(s) 916, 952, 1105
AflII CTTAAG 1 cut(s) 1060
AflIII ACRYGT 1 cut(s) 399
AgeI ACCGGT 1 cut(s) 1033
AgsI TTSAA 7 cut(s) 87, 317, 606, 829, 851, 1085, 1139
AjiI CACGTC 1 cut(s) 697
AjnI CCWGG 2 cut(s) 482, 660
AjuI GAANNNNNNNTTGG 2 cut(s) 335, 367
AluBI AGCT 3 cut(s) 58, 211, 686
AluI AGCT 3 cut(s) 58, 211, 686
Alw21I GWGCWC 2 cut(s) 688, 759
Alw26I GTCTC 4 cut(s) 274, 291, 502, 1177
AlwI GGATC 1 cut(s) 1109
ApeKI GCWGC 2 cut(s) 55, 613
ApoI RAATTY 2 cut(s) 1052, 1080
AsiGI ACCGGT 1 cut(s) 1033
AsuC2I CCSGG 2 cut(s) 566, 906
AsuHPI GGTGA 2 cut(s) 26, 104
AsuII TTCGAA 1 cut(s) 380
BanI GGYRCC 1 cut(s) 932
BanII GRGCYC 2 cut(s) 446, 688
BarI GAAGNNNNNNTAC 2 cut(s) 1102, 1134
BbsI GAAGAC 1 cut(s) 11
Bbv12I GWGCWC 2 cut(s) 688, 759
BbvI GCAGC 2 cut(s) 67, 625
BccI CCATC 5 cut(s) 4, 246, 619, 923, 1032
BcgI CGANNNNNNTGC 4 cut(s) 285, 319, 668, 702
BciT130I CCWGG 2 cut(s) 484, 662
BciVI GTATCC 1 cut(s) 784
BclI TGATCA 2 cut(s) 120, 346
BcnI CCSGG 2 cut(s) 566, 906
BcoDI GTCTC 4 cut(s) 274, 291, 502, 1177
BfaI CTAG 3 cut(s) 732, 980, 1157
BfmI CTRYAG 1 cut(s) 771
BfrI CTTAAG 1 cut(s) 1060
BfuAI ACCTGC 1 cut(s) 1195
BfuI GTATCC 1 cut(s) 784
BisI GCNGC 3 cut(s) 56, 180, 614
BlsI GCNGC 3 cut(s) 57, 181, 615
Bme1390I CCNGG 4 cut(s) 484, 566, 662, 906
BmgBI CACGTC 1 cut(s) 697
BmiI GGNNCC 3 cut(s) 481, 934, 1032
BmrFI CCNGG 4 cut(s) 484, 566, 662, 906
BmrI ACTGGG 1 cut(s) 1190
BmsI GCATC 3 cut(s) 181, 265, 966
BmuI ACTGGG 1 cut(s) 1190
BpiI GAAGAC 1 cut(s) 11
Bpu10I CCTNAGC 1 cut(s) 546
Bpu14I TTCGAA 1 cut(s) 380
BpuEI CTTGAG 1 cut(s) 94
BpuMI CCSGG 2 cut(s) 566, 906
Bsa29I ATCGAT 1 cut(s) 250
BsaBI GATNNNNATC 1 cut(s) 119
BsaI GGTCTC 1 cut(s) 1177
BsaJI CCNNGG 1 cut(s) 483
BsaWI WCCGGW 1 cut(s) 1033
Bse118I RCCGGY 1 cut(s) 1033
Bse1I ACTGG 1 cut(s) 1196
Bse3DI GCAATG 2 cut(s) 337, 726
Bse8I GATNNNNATC 1 cut(s) 119
BseBI CCWGG 2 cut(s) 484, 662
BseCI ATCGAT 1 cut(s) 250
BseDI CCNNGG 1 cut(s) 483
BseGI GGATG 4 cut(s) 46, 577, 817, 1020
BseJI GATNNNNATC 1 cut(s) 119
BseMI GCAATG 2 cut(s) 337, 726
BseMII CTCAG 2 cut(s) 14, 630
BseNI ACTGG 1 cut(s) 1196
BseXI GCAGC 2 cut(s) 67, 625
BsgI GTGCAG 1 cut(s) 632
Bsh1285I CGRYCG 1 cut(s) 1038
BshNI GGYRCC 1 cut(s) 932
BshTI ACCGGT 1 cut(s) 1033
BshVI ATCGAT 1 cut(s) 250
BsiEI CGRYCG 1 cut(s) 1038
BsiHKAI GWGCWC 2 cut(s) 688, 759
BsiSI CCGG 3 cut(s) 565, 906, 1034
BsmAI GTCTC 4 cut(s) 274, 291, 502, 1177
BsmI GAATGC 1 cut(s) 421
Bso31I GGTCTC 1 cut(s) 1177
Bsp119I TTCGAA 1 cut(s) 380
Bsp1286I GDGCHC 3 cut(s) 446, 688, 759
Bsp1407I TGTACA 1 cut(s) 1103
Bsp143I GATC 6 cut(s) 120, 247, 346, 831, 877, 1114
BspACI CCGC 2 cut(s) 180, 819
BspCNI CTCAG 2 cut(s) 15, 631
BspDI ATCGAT 1 cut(s) 250
BspHI TCATGA 2 cut(s) 751, 996
BspLI GGNNCC 3 cut(s) 481, 934, 1032
BspMI ACCTGC 1 cut(s) 1195
BspPI GGATC 1 cut(s) 1109
BspT104I TTCGAA 1 cut(s) 380
BspT107I GGYRCC 1 cut(s) 932
BspTI CTTAAG 1 cut(s) 1060
BspTNI GGTCTC 1 cut(s) 1177
BsrDI GCAATG 2 cut(s) 337, 726
BsrFI RCCGGY 1 cut(s) 1033
BsrGI TGTACA 1 cut(s) 1103
BsrI ACTGG 1 cut(s) 1196
BssAI RCCGGY 1 cut(s) 1033
BssECI CCNNGG 1 cut(s) 483
BssMI GATC 6 cut(s) 120, 247, 346, 831, 877, 1114
Bst2UI CCWGG 2 cut(s) 484, 662
Bst4CI ACNGT 4 cut(s) 358, 499, 914, 1089
Bst6I CTCTTC 2 cut(s) 615, 1155
BstAFI CTTAAG 1 cut(s) 1060
BstAUI TGTACA 1 cut(s) 1103
BstBI TTCGAA 1 cut(s) 380
BstC8I GCNNGC 2 cut(s) 184, 1192
BstDEI CTNAG 4 cut(s) 23, 546, 572, 639
BstEII GGTNACC 1 cut(s) 656
BstF5I GGATG 4 cut(s) 46, 577, 817, 1020
BstKTI GATC 6 cut(s) 123, 250, 349, 834, 880, 1117
BstMAI GTCTC 4 cut(s) 274, 291, 502, 1177
BstMBI GATC 6 cut(s) 120, 247, 346, 831, 877, 1114
BstMCI CGRYCG 1 cut(s) 1038
BstMWI GCNNNNNNNGC 1 cut(s) 862
BstNI CCWGG 2 cut(s) 484, 662
BstNSI RCATGY 2 cut(s) 403, 1194
BstPI GGTNACC 1 cut(s) 656
BstSCI CCNGG 4 cut(s) 482, 564, 660, 904
BstSFI CTRYAG 1 cut(s) 771
BstV1I GCAGC 2 cut(s) 67, 625
BstV2I GAAGAC 1 cut(s) 11
Bsu15I ATCGAT 1 cut(s) 250
BsuI GTATCC 1 cut(s) 784
BsuTUI ATCGAT 1 cut(s) 250
BtrI CACGTC 1 cut(s) 697
BtsCI GGATG 4 cut(s) 46, 577, 817, 1020
BtsIMutI CAGTG 1 cut(s) 457
BveI ACCTGC 1 cut(s) 1195
Cac8I GCNNGC 2 cut(s) 184, 1192
CciI TCATGA 2 cut(s) 751, 996
Cfr10I RCCGGY 1 cut(s) 1033
ClaI ATCGAT 1 cut(s) 250
CseI GACGC 1 cut(s) 1161
Csp6I GTAC 3 cut(s) 915, 951, 1104
CspAI ACCGGT 1 cut(s) 1033
CspCI CAANNNNNGTGG 2 cut(s) 457, 492
CviAII CATG 5 cut(s) 365, 400, 752, 997, 1191
CviJI RGCY 6 cut(s) 58, 211, 444, 686, 763, 1048
CviKI_1 RGCY 6 cut(s) 58, 211, 444, 686, 763, 1048
CviQI GTAC 3 cut(s) 915, 951, 1104
DdeI CTNAG 4 cut(s) 23, 546, 572, 639
DpnI GATC 6 cut(s) 122, 249, 348, 833, 879, 1116
DpnII GATC 6 cut(s) 120, 247, 346, 831, 877, 1114
Eam1104I CTCTTC 2 cut(s) 615, 1155
EarI CTCTTC 2 cut(s) 615, 1155
EciI GGCGGA 1 cut(s) 834
Ecl136II GAGCTC 1 cut(s) 686
Eco24I GRGCYC 2 cut(s) 446, 688
Eco31I GGTCTC 1 cut(s) 1177
Eco53kI GAGCTC 1 cut(s) 686
Eco91I GGTNACC 1 cut(s) 656
EcoICRI GAGCTC 1 cut(s) 686
EcoO65I GGTNACC 1 cut(s) 656
EcoRI GAATTC 1 cut(s) 1080
EcoRII CCWGG 2 cut(s) 482, 660
EcoT38I GRGCYC 2 cut(s) 446, 688
FaeI CATG 5 cut(s) 368, 403, 755, 1000, 1194
FatI CATG 5 cut(s) 364, 399, 751, 996, 1190
FauNDI CATATG 2 cut(s) 302, 515
FbaI TGATCA 2 cut(s) 120, 346
Fnu4HI GCNGC 3 cut(s) 56, 180, 614
FokI GGATG 4 cut(s) 53, 564, 824, 1007
FriOI GRGCYC 2 cut(s) 446, 688
Fsp4HI GCNGC 3 cut(s) 56, 180, 614
FspBI CTAG 3 cut(s) 732, 980, 1157
GluI GCNGC 3 cut(s) 56, 180, 614
HapII CCGG 3 cut(s) 565, 906, 1034
HgaI GACGC 1 cut(s) 1161
Hin1II CATG 5 cut(s) 368, 403, 755, 1000, 1194
HinfI GANTC 9 cut(s) 19, 262, 282, 310, 377, 455, 535, 960, 1166
HpaII CCGG 3 cut(s) 565, 906, 1034
HphI GGTGA 2 cut(s) 26, 104
Hpy166II GTNNAC 1 cut(s) 778
Hpy188I TCNGA 8 cut(s) 24, 40, 406, 460, 633, 975, 1015, 1123
Hpy188III TCNNGA 9 cut(s) 73, 87, 137, 296, 314, 752, 997, 1028, 1157
Hpy8I GTNNAC 1 cut(s) 778
HpyAV CCTTC 3 cut(s) 809, 977, 1128
HpyCH4III ACNGT 4 cut(s) 358, 499, 914, 1089
HpyCH4IV ACGT 1 cut(s) 696
HpyF10VI GCNNNNNNNGC 1 cut(s) 862
HpyF3I CTNAG 4 cut(s) 23, 546, 572, 639
HpySE526I ACGT 1 cut(s) 696
Hsp92II CATG 5 cut(s) 368, 403, 755, 1000, 1194
Ksp22I TGATCA 2 cut(s) 120, 346
Kzo9I GATC 6 cut(s) 120, 247, 346, 831, 877, 1114
Lsp1109I GCAGC 2 cut(s) 67, 625
LweI GCATC 3 cut(s) 181, 265, 966
MaeI CTAG 3 cut(s) 732, 980, 1157
MaeII ACGT 1 cut(s) 696
MaeIII GTNAC 4 cut(s) 92, 191, 656, 908
MalI GATC 6 cut(s) 122, 249, 348, 833, 879, 1116
MboI GATC 6 cut(s) 120, 247, 346, 831, 877, 1114
MboII GAAGA 7 cut(s) 16, 386, 632, 677, 740, 841, 1172
MfeI CAATTG 1 cut(s) 606
MhlI GDGCHC 3 cut(s) 446, 688, 759
MluCI AATT 7 cut(s) 350, 407, 593, 606, 867, 1052, 1080
MlyI GAGTC 2 cut(s) 256, 276
MmeI TCCRAC 1 cut(s) 82
MnlI CCTC 7 cut(s) 83, 181, 320, 572, 669, 1090, 1156
MseI TTAA 5 cut(s) 237, 410, 870, 1044, 1061
MspA1I CMGCKG 1 cut(s) 58
MspCI CTTAAG 1 cut(s) 1060
MspI CCGG 3 cut(s) 565, 906, 1034
MspR9I CCNGG 4 cut(s) 484, 566, 662, 906
MunI CAATTG 1 cut(s) 606
Mva1269I GAATGC 1 cut(s) 421
MvaI CCWGG 2 cut(s) 484, 662
MwoI GCNNNNNNNGC 1 cut(s) 862
NciI CCSGG 2 cut(s) 566, 906
NdeI CATATG 2 cut(s) 302, 515
NdeII GATC 6 cut(s) 120, 247, 346, 831, 877, 1114
NlaIII CATG 5 cut(s) 368, 403, 755, 1000, 1194
NlaIV GGNNCC 3 cut(s) 481, 934, 1032
NmuCI GTSAC 2 cut(s) 92, 191
NspI RCATGY 2 cut(s) 403, 1194
NspV TTCGAA 1 cut(s) 380
PaeI GCATGC 1 cut(s) 1194
PagI TCATGA 2 cut(s) 751, 996
PciI ACATGT 1 cut(s) 399
PcsI WCGNNNNNNNCGW 1 cut(s) 183
PctI GAATGC 1 cut(s) 421
PfeI GAWTC 7 cut(s) 19, 310, 377, 455, 535, 960, 1166
PfoI TCCNGGA 1 cut(s) 564
PinAI ACCGGT 1 cut(s) 1033
PkrI GCNGC 3 cut(s) 57, 181, 615
PleI GAGTC 2 cut(s) 256, 276
PpsI GAGTC 2 cut(s) 256, 276
PscI ACATGT 1 cut(s) 399
PsiI TTATAA 1 cut(s) 503
Psp124BI GAGCTC 1 cut(s) 688
Psp6I CCWGG 2 cut(s) 482, 660
PspEI GGTNACC 1 cut(s) 656
PspGI CCWGG 2 cut(s) 482, 660
PspN4I GGNNCC 3 cut(s) 481, 934, 1032
PvuII CAGCTG 1 cut(s) 58
RsaI GTAC 3 cut(s) 916, 952, 1105
RsaNI GTAC 3 cut(s) 915, 951, 1104
SacI GAGCTC 1 cut(s) 688
SaqAI TTAA 5 cut(s) 237, 410, 870, 1044, 1061
SatI GCNGC 3 cut(s) 56, 180, 614
Sau3AI GATC 6 cut(s) 120, 247, 346, 831, 877, 1114
SchI GAGTC 2 cut(s) 256, 276
ScrFI CCNGG 4 cut(s) 484, 566, 662, 906
SduI GDGCHC 3 cut(s) 446, 688, 759
SfaNI GCATC 3 cut(s) 181, 265, 966
SfcI CTRYAG 1 cut(s) 771
SfuI TTCGAA 1 cut(s) 380
SmlI CTYRAG 2 cut(s) 73, 1060
SmoI CTYRAG 2 cut(s) 73, 1060
SphI GCATGC 1 cut(s) 1194
Sse9I AATT 7 cut(s) 350, 407, 593, 606, 867, 1052, 1080
SsiI CCGC 2 cut(s) 180, 819
SspI AATATT 1 cut(s) 586
SspMI CTAG 3 cut(s) 732, 980, 1157
SstI GAGCTC 1 cut(s) 688
StyD4I CCNGG 4 cut(s) 482, 564, 660, 904
TaaI ACNGT 4 cut(s) 358, 499, 914, 1089
TaiI ACGT 1 cut(s) 699
TaqI TCGA 8 cut(s) 48, 207, 250, 295, 380, 688, 1038, 1066
TaqII GACCGA 1 cut(s) 1016
TasI AATT 7 cut(s) 350, 407, 593, 606, 867, 1052, 1080
TatI WGTACW 1 cut(s) 1103
TauI GCSGC 1 cut(s) 182
TfiI GAWTC 7 cut(s) 19, 310, 377, 455, 535, 960, 1166
Tru1I TTAA 5 cut(s) 237, 410, 870, 1044, 1061
Tru9I TTAA 5 cut(s) 237, 410, 870, 1044, 1061
TscAI CASTG 1 cut(s) 457
TseFI GTSAC 2 cut(s) 92, 191
TseI GCWGC 2 cut(s) 55, 613
Tsp45I GTSAC 2 cut(s) 92, 191
TspDTI ATGAA 9 cut(s) 17, 414, 740, 755, 828, 952, 985, 1009, 1062
TspGWI ACGGA 1 cut(s) 274
TspRI CASTG 1 cut(s) 457
Vha464I CTTAAG 1 cut(s) 1060
XapI RAATTY 2 cut(s) 1052, 1080
XbaI TCTAGA 1 cut(s) 1156
XceI RCATGY 2 cut(s) 403, 1194
XspI CTAG 3 cut(s) 732, 980, 1157
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.