Prupe.3G158200_v2.0.a1

Protein AAR2 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0009578
Physical Location & Seq
Forward (+)
17703035 .. 17710404
7370 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G158200.2

Sequence Viewer

Length: 1191 bp
ATGGATGCTGAAATGGCGATGGAGCTTGTGAAGCATGGCCTAACGCTTCTCTTCCTCGACGTTCCTCAGCACACTCTCATCGGCATTGATACTCAGATGTTTTCAGTTGGCCCTGACTTTAAAGGCATAAAGATGATTCCTCCTGGTCCTCACTTTGTGTACTATAGCTCATCCACCAGAGATGGCAAGGAATTCTCACCAATTATTGGGTTTTTTGTTGATGCTGGACCATCTGAGGTAATTGTTCGCAAGTGGGATCAACAAGAGGAACGATTAGTCAAAGTACCAGAAGAAGAGGAAGAGAGATATTGCCAAGCAGTTCGAAGTTTGGAGTTTGATAGACATCTTGGTCCTTATAATCTAAGCCAGTACGGAGATTGGAAACAGCTATCCAATTACATTACGAAGAGCATCATTCAACGGATTGAACCCATTGGAGGAGAAATTACTGTTGCATCTGAATCTACAATGCATGTAAACACTCCTAGCACAATGATGGAGAAAGCTCTAGATGAGCAGTTGAATGCTAGTAGGTGCTCAACACCCAGTGACAAGTCTCAGACGAGAGGATGTTACTACACATCAATTCCCCGTGTTACCAAACGAAAGGGAATCCATGGCCAACAACTTACTTCTTTGAATCTTGACAAGACACAGTTAGTAGAAAGTGTACTACTAGAAGATTATGGAGGTTCTGAGGACTTGCTTCTCGCAGAGCTGCAATTTGCCTATATTGCATTTTTGATGGGGCAATCACTTGAAGCATTTCTACAGTGGAAATCCTTGGTCAGTCTTTTATTTGGATGCACTGAAGCTCCTTTCCATACAAGAAGTCGGCTATTTGCAAAGTTTATTAGAGTCATCTACTATCAATTGAAACAAGGACTTCAGAAAGATTGCACAGACACGAACAGTGGATCAACCTTGCTAGATGATTCATGGTTTTCTGCTGATAGTTTTTTGCACCGTCTTTTCAAGGATTTTTTTTTGCTGGTGCAAGATGCCTCAGTTGTTGATGGAGATCTTCTATCATGGACAAGGAAACTCAAGGAGTTGCTTGAAAACAATCTTGGATGGGAATTCCAGCAAAACAGTGCAGTTGATGGGATGTACTTTGAAGATGATGACGAGTTCGCTCCTGTGGTTGAGATGCTGGATGACCCGAGTTCTAGTGTGGCGCCATCGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAR2

Protein Analysis

397

Amino Acids

44.94

Weight (kDa)

4.75

Isoelectric Point (pI)

40.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 357
AasI GACNNNNNNGTC 1 cut(s) 348
AccB1I GGYRCC 1 cut(s) 1177
AccB7I CCANNNNNTGG 1 cut(s) 206
AclWI GGATC 2 cut(s) 264, 925
AcoI YGGCCR 1 cut(s) 619
AcsI RAATTY 2 cut(s) 191, 1079
AcuI CTGAAG 2 cut(s) 831, 872
AcyI GRCGYC 1 cut(s) 1178
AdeI CACNNNGTG 2 cut(s) 157, 548
AfaI GTAC 5 cut(s) 161, 285, 371, 672, 1112
AfiI CCNNNNNNNGG 2 cut(s) 206, 437
AgsI TTSAA 9 cut(s) 419, 428, 523, 640, 761, 877, 976, 1061, 1118
AjnI CCWGG 1 cut(s) 142
AjuI GAANNNNNNNTTGG 2 cut(s) 1053, 1085
AluBI AGCT 6 cut(s) 25, 168, 388, 506, 718, 815
AluI AGCT 6 cut(s) 25, 168, 388, 506, 718, 815
Alw21I GWGCWC 1 cut(s) 539
Alw26I GTCTC 1 cut(s) 561
AlwI GGATC 2 cut(s) 264, 925
Ama87I CYCGRG 1 cut(s) 1162
AoxI GGCC 3 cut(s) 37, 109, 619
ApeKI GCWGC 1 cut(s) 718
ApoI RAATTY 2 cut(s) 191, 1079
Asp700I GAANNNNTTC 1 cut(s) 765
AspLEI GCGC 1 cut(s) 1180
AspS9I GGNCC 4 cut(s) 110, 146, 227, 350
AsuHPI GGTGA 1 cut(s) 189
AsuII TTCGAA 1 cut(s) 322
AvaI CYCGRG 1 cut(s) 1162
AvaII GGWCC 3 cut(s) 146, 227, 350
BalI TGGCCA 1 cut(s) 621
BanI GGYRCC 1 cut(s) 1177
BarI GAAGNNNNNNTAC 2 cut(s) 753, 785
Bbv12I GWGCWC 1 cut(s) 539
BbvCI CCTCAGC 1 cut(s) 66
BbvI GCAGC 1 cut(s) 705
BccI CCATC 9 cut(s) 13, 176, 238, 490, 739, 1010, 1068, 1097, 1189
BciT130I CCWGG 1 cut(s) 144
BcoDI GTCTC 1 cut(s) 561
BfaI CTAG 6 cut(s) 486, 509, 528, 677, 929, 1170
BfmI CTRYAG 2 cut(s) 163, 770
BfoI RGCGCY 1 cut(s) 1181
BglII AGATCT 1 cut(s) 1021
BisI GCNGC 1 cut(s) 719
BlsI GCNGC 1 cut(s) 720
Bme1390I CCNGG 1 cut(s) 144
Bme18I GGWCC 3 cut(s) 146, 227, 350
BmeT110I CYCGRG 1 cut(s) 1162
BmgT120I GGNCC 4 cut(s) 110, 146, 227, 350
BmiI GGNNCC 1 cut(s) 1179
BmrFI CCNGG 1 cut(s) 144
BmrI ACTGGG 1 cut(s) 540
BmsI GCATC 6 cut(s) 211, 420, 464, 794, 991, 1140
BmuI ACTGGG 1 cut(s) 540
Bpu10I CCTNAGC 1 cut(s) 66
Bpu14I TTCGAA 1 cut(s) 322
BpuEI CTTGAG 1 cut(s) 1031
BsaBI GATNNNNATC 2 cut(s) 342, 1020
BsaHI GRCGYC 1 cut(s) 1178
BsaJI CCNNGG 2 cut(s) 616, 783
BsaXI ACNNNNNCTCC 2 cut(s) 799, 829
Bsc4I CCNNNNNNNGG 2 cut(s) 206, 437
Bse1I ACTGG 2 cut(s) 367, 546
Bse8I GATNNNNATC 2 cut(s) 342, 1020
BseBI CCWGG 1 cut(s) 144
BseDI CCNNGG 2 cut(s) 616, 783
BseGI GGATG 7 cut(s) 10, 170, 575, 809, 1079, 1113, 1162
BseJI GATNNNNATC 2 cut(s) 342, 1020
BseLI CCNNNNNNNGG 2 cut(s) 206, 437
BseMII CTCAG 6 cut(s) 80, 107, 225, 572, 687, 1020
BseNI ACTGG 2 cut(s) 367, 546
BseRI GAGGAG 1 cut(s) 453
BseXI GCAGC 1 cut(s) 705
BsgI GTGCAG 1 cut(s) 1116
BshFI GGCC 3 cut(s) 39, 111, 621
BshNI GGYRCC 1 cut(s) 1177
BsiHKAI GWGCWC 1 cut(s) 539
BsiHKCI CYCGRG 1 cut(s) 1162
BslI CCNNNNNNNGG 2 cut(s) 206, 437
BsmAI GTCTC 1 cut(s) 561
BsmI GAATGC 1 cut(s) 529
BsnI GGCC 3 cut(s) 39, 111, 621
BsoBI CYCGRG 1 cut(s) 1162
Bsp119I TTCGAA 1 cut(s) 322
Bsp1286I GDGCHC 1 cut(s) 539
Bsp143I GATC 3 cut(s) 256, 917, 1021
Bsp19I CCATGG 1 cut(s) 616
BspANI GGCC 3 cut(s) 39, 111, 621
BspCNI CTCAG 6 cut(s) 79, 106, 226, 571, 688, 1019
BspLI GGNNCC 1 cut(s) 1179
BspPI GGATC 2 cut(s) 264, 925
BspQI GCTCTTC 1 cut(s) 401
BspT104I TTCGAA 1 cut(s) 322
BspT107I GGYRCC 1 cut(s) 1177
BsrI ACTGG 2 cut(s) 367, 546
BssECI CCNNGG 2 cut(s) 616, 783
BssMI GATC 3 cut(s) 256, 917, 1021
BssNI GRCGYC 1 cut(s) 1178
BssT1I CCWWGG 2 cut(s) 616, 783
Bst2UI CCWGG 1 cut(s) 144
Bst4CI ACNGT 6 cut(s) 451, 657, 774, 914, 968, 1094
Bst6I CTCTTC 4 cut(s) 56, 288, 294, 401
BstACI GRCGYC 1 cut(s) 1178
BstBI TTCGAA 1 cut(s) 322
BstDEI CTNAG 7 cut(s) 66, 93, 234, 362, 558, 696, 1006
BstDSI CCRYGG 1 cut(s) 616
BstF5I GGATG 7 cut(s) 10, 170, 575, 809, 1079, 1113, 1162
BstH2I RGCGCY 1 cut(s) 1181
BstHHI GCGC 1 cut(s) 1180
BstKTI GATC 3 cut(s) 259, 920, 1024
BstMAI GTCTC 1 cut(s) 561
BstMBI GATC 3 cut(s) 256, 917, 1021
BstMWI GCNNNNNNNGC 3 cut(s) 14, 31, 734
BstNI CCWGG 1 cut(s) 144
BstNSI RCATGY 1 cut(s) 476
BstSCI CCNGG 1 cut(s) 142
BstSFI CTRYAG 2 cut(s) 163, 770
BstV1I GCAGC 1 cut(s) 705
BstX2I RGATCY 1 cut(s) 1021
BstYI RGATCY 1 cut(s) 1021
BsuRI GGCC 3 cut(s) 39, 111, 621
BtgI CCRYGG 1 cut(s) 616
BtgZI GCGATG 1 cut(s) 32
BtsCI GGATG 7 cut(s) 10, 170, 575, 809, 1079, 1113, 1162
BtsIMutI CAGTG 5 cut(s) 553, 779, 807, 919, 1099
CfoI GCGC 1 cut(s) 1180
Cfr13I GGNCC 4 cut(s) 110, 146, 227, 350
Csp6I GTAC 5 cut(s) 160, 284, 370, 671, 1111
CviAII CATG 5 cut(s) 35, 473, 617, 939, 1032
CviQI GTAC 5 cut(s) 160, 284, 370, 671, 1111
DdeI CTNAG 7 cut(s) 66, 93, 234, 362, 558, 696, 1006
DinI GGCGCC 1 cut(s) 1179
DpnI GATC 3 cut(s) 258, 919, 1023
DpnII GATC 3 cut(s) 256, 917, 1021
DraI TTTAAA 1 cut(s) 121
DraIII CACNNNGTG 2 cut(s) 157, 548
DrdI GACNNNNNNGTC 1 cut(s) 348
DseDI GACNNNNNNGTC 1 cut(s) 348
EaeI YGGCCR 1 cut(s) 619
Eam1104I CTCTTC 4 cut(s) 56, 288, 294, 401
EarI CTCTTC 4 cut(s) 56, 288, 294, 401
Eco130I CCWWGG 2 cut(s) 616, 783
Eco47I GGWCC 3 cut(s) 146, 227, 350
Eco57I CTGAAG 2 cut(s) 831, 872
Eco88I CYCGRG 1 cut(s) 1162
EcoRI GAATTC 2 cut(s) 191, 1079
EcoRII CCWGG 1 cut(s) 142
EcoT14I CCWWGG 2 cut(s) 616, 783
EcoT22I ATGCAT 1 cut(s) 474
EgeI GGCGCC 1 cut(s) 1179
EheI GGCGCC 1 cut(s) 1179
ErhI CCWWGG 2 cut(s) 616, 783
FaeI CATG 5 cut(s) 38, 476, 620, 942, 1035
FatI CATG 5 cut(s) 34, 472, 616, 938, 1031
Fnu4HI GCNGC 1 cut(s) 719
FokI GGATG 7 cut(s) 17, 157, 582, 816, 1086, 1120, 1169
Fsp4HI GCNGC 1 cut(s) 719
FspBI CTAG 6 cut(s) 486, 509, 528, 677, 929, 1170
GlaI GCGC 1 cut(s) 1179
GluI GCNGC 1 cut(s) 719
HaeII RGCGCY 1 cut(s) 1181
HaeIII GGCC 3 cut(s) 39, 111, 621
HhaI GCGC 1 cut(s) 1180
Hin1I GRCGYC 1 cut(s) 1178
Hin1II CATG 5 cut(s) 38, 476, 620, 942, 1035
Hin6I GCGC 1 cut(s) 1178
HinP1I GCGC 1 cut(s) 1178
HinfI GANTC 6 cut(s) 136, 461, 612, 640, 858, 935
HphI GGTGA 1 cut(s) 189
Hpy166II GTNNAC 3 cut(s) 160, 478, 671
Hpy188I TCNGA 6 cut(s) 96, 235, 460, 561, 697, 891
Hpy188III TCNNGA 2 cut(s) 509, 644
Hpy8I GTNNAC 3 cut(s) 160, 478, 671
Hpy99I CGWCG 1 cut(s) 62
HpyCH4III ACNGT 6 cut(s) 451, 657, 774, 914, 968, 1094
HpyCH4IV ACGT 1 cut(s) 60
HpyF10VI GCNNNNNNNGC 3 cut(s) 14, 31, 734
HpyF3I CTNAG 7 cut(s) 66, 93, 234, 362, 558, 696, 1006
HpySE526I ACGT 1 cut(s) 60
Hsp92I GRCGYC 1 cut(s) 1178
Hsp92II CATG 5 cut(s) 38, 476, 620, 942, 1035
HspAI GCGC 1 cut(s) 1178
KasI GGCGCC 1 cut(s) 1177
Kzo9I GATC 3 cut(s) 256, 917, 1021
LguI GCTCTTC 1 cut(s) 401
LmnI GCTCC 3 cut(s) 22, 820, 1141
Lsp1109I GCAGC 1 cut(s) 705
LweI GCATC 6 cut(s) 211, 420, 464, 794, 991, 1140
MaeI CTAG 6 cut(s) 486, 509, 528, 677, 929, 1170
MaeII ACGT 1 cut(s) 60
MaeIII GTNAC 3 cut(s) 548, 572, 595
MalI GATC 3 cut(s) 258, 919, 1023
MboI GATC 3 cut(s) 256, 917, 1021
MboII GAAGA 8 cut(s) 43, 302, 305, 311, 418, 692, 1016, 1130
MfeI CAATTG 1 cut(s) 872
MflI RGATCY 1 cut(s) 1021
MhlI GDGCHC 1 cut(s) 539
MlsI TGGCCA 1 cut(s) 621
MluCI AATT 9 cut(s) 191, 201, 240, 394, 444, 585, 722, 872, 1079
MluNI TGGCCA 1 cut(s) 621
Mly113I GGCGCC 1 cut(s) 1178
MlyI GAGTC 1 cut(s) 867
Mox20I TGGCCA 1 cut(s) 621
Mph1103I ATGCAT 1 cut(s) 474
MroXI GAANNNNTTC 1 cut(s) 765
MscI TGGCCA 1 cut(s) 621
MseI TTAA 2 cut(s) 120, 1189
MslI CAYNNNNRTG 2 cut(s) 131, 494
Msp20I TGGCCA 1 cut(s) 621
MspR9I CCNGG 1 cut(s) 144
MunI CAATTG 1 cut(s) 872
Mva1269I GAATGC 1 cut(s) 529
MvaI CCWGG 1 cut(s) 144
MwoI GCNNNNNNNGC 3 cut(s) 14, 31, 734
NarI GGCGCC 1 cut(s) 1178
NcoI CCATGG 1 cut(s) 616
NdeII GATC 3 cut(s) 256, 917, 1021
NlaIII CATG 5 cut(s) 38, 476, 620, 942, 1035
NlaIV GGNNCC 1 cut(s) 1179
NmuCI GTSAC 1 cut(s) 548
NsiI ATGCAT 1 cut(s) 474
NspI RCATGY 1 cut(s) 476
NspV TTCGAA 1 cut(s) 322
PciSI GCTCTTC 1 cut(s) 401
PctI GAATGC 1 cut(s) 529
PdmI GAANNNNTTC 1 cut(s) 765
PfeI GAWTC 5 cut(s) 136, 461, 612, 640, 935
PflMI CCANNNNNTGG 1 cut(s) 206
PkrI GCNGC 1 cut(s) 720
PleI GAGTC 1 cut(s) 866
PluTI GGCGCC 1 cut(s) 1181
PpsI GAGTC 1 cut(s) 866
PsiI TTATAA 1 cut(s) 357
Psp6I CCWGG 1 cut(s) 142
PspGI CCWGG 1 cut(s) 142
PspN4I GGNNCC 1 cut(s) 1179
PspPI GGNCC 4 cut(s) 110, 146, 227, 350
PsuI RGATCY 1 cut(s) 1021
RsaI GTAC 5 cut(s) 161, 285, 371, 672, 1112
RsaNI GTAC 5 cut(s) 160, 284, 370, 671, 1111
RseI CAYNNNNRTG 2 cut(s) 131, 494
SapI GCTCTTC 1 cut(s) 401
SaqAI TTAA 2 cut(s) 120, 1189
SatI GCNGC 1 cut(s) 719
Sau3AI GATC 3 cut(s) 256, 917, 1021
Sau96I GGNCC 4 cut(s) 110, 146, 227, 350
SchI GAGTC 1 cut(s) 867
ScrFI CCNGG 1 cut(s) 144
SduI GDGCHC 1 cut(s) 539
SfaNI GCATC 6 cut(s) 211, 420, 464, 794, 991, 1140
SfcI CTRYAG 2 cut(s) 163, 770
SfoI GGCGCC 1 cut(s) 1179
SfuI TTCGAA 1 cut(s) 322
SinI GGWCC 3 cut(s) 146, 227, 350
SmiMI CAYNNNNRTG 2 cut(s) 131, 494
SmlI CTYRAG 1 cut(s) 1046
SmoI CTYRAG 1 cut(s) 1046
Sse9I AATT 9 cut(s) 191, 201, 240, 394, 444, 585, 722, 872, 1079
SspDI GGCGCC 1 cut(s) 1177
SspMI CTAG 6 cut(s) 486, 509, 528, 677, 929, 1170
StyD4I CCNGG 1 cut(s) 142
StyI CCWWGG 2 cut(s) 616, 783
TaaI ACNGT 6 cut(s) 451, 657, 774, 914, 968, 1094
TaiI ACGT 1 cut(s) 63
TaqI TCGA 2 cut(s) 57, 322
TasI AATT 9 cut(s) 191, 201, 240, 394, 444, 585, 722, 872, 1079
TatI WGTACW 3 cut(s) 159, 670, 1110
TfiI GAWTC 5 cut(s) 136, 461, 612, 640, 935
Tru1I TTAA 2 cut(s) 120, 1189
Tru9I TTAA 2 cut(s) 120, 1189
TscAI CASTG 5 cut(s) 553, 779, 814, 919, 1099
TseFI GTSAC 1 cut(s) 548
TseI GCWGC 1 cut(s) 718
Tsp45I GTSAC 1 cut(s) 548
TspDTI ATGAA 1 cut(s) 927
TspGWI ACGGA 2 cut(s) 387, 436
TspRI CASTG 5 cut(s) 553, 779, 814, 919, 1099
Van91I CCANNNNNTGG 1 cut(s) 206
VpaK11BI GGWCC 3 cut(s) 146, 227, 350
XapI RAATTY 2 cut(s) 191, 1079
XbaI TCTAGA 1 cut(s) 508
XceI RCATGY 1 cut(s) 476
XmnI GAANNNNTTC 1 cut(s) 765
XspI CTAG 6 cut(s) 486, 509, 528, 677, 929, 1170
Zsp2I ATGCAT 1 cut(s) 474
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.