Domain of unknown function (DUF4228)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G66480 AT5G37840 |
| malus_domestica | MD09G1261400.v1.1 |
| prunus_persica | Prupe.3G158800_v2.0.a1 |
| pyrus_communis | pycom09g17580 |
| rosa_chinensis | RchiOBHm_Chr3g0493541 |
| rosa_laevigata | RLG00000022707 |
| rosa_multiflora | Rmu_sc0002343.1_g000048 |
| rosa_roxburghii | Rroxscaffold_6G00391510 |
| rosa_rugosa | Rorug03G0261900 |
| rosa_samantha | Rh3AG310900 Rh3BG346900 Rh3CG344800 Rh3DG346200 |
| rosa_wichuraiana | Rw3G027330 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 397 |
| AccII | CGCG | 2 cut(s) | 356, 601 |
| AciI | CCGC | 9 cut(s) | 176, 354, 446, 506, 515, 544, 550, 599, 601 |
| AcoI | YGGCCR | 3 cut(s) | 360, 558, 562 |
| AcsI | RAATTY | 1 cut(s) | 645 |
| AfaI | GTAC | 1 cut(s) | 216 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 294 |
| AgsI | TTSAA | 4 cut(s) | 64, 127, 278, 428 |
| AjnI | CCWGG | 1 cut(s) | 109 |
| AleI | CACNNNNGTG | 1 cut(s) | 150 |
| AluBI | AGCT | 3 cut(s) | 137, 472, 662 |
| AluI | AGCT | 3 cut(s) | 137, 472, 662 |
| Alw26I | GTCTC | 1 cut(s) | 321 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 137 |
| AoxI | GGCC | 5 cut(s) | 112, 191, 360, 558, 562 |
| ApeKI | GCWGC | 1 cut(s) | 547 |
| ApoI | RAATTY | 1 cut(s) | 645 |
| AspS9I | GGNCC | 3 cut(s) | 192, 334, 374 |
| AsuHPI | GGTGA | 2 cut(s) | 49, 109 |
| AvaII | GGWCC | 2 cut(s) | 334, 374 |
| AxyI | CCTNAGG | 1 cut(s) | 188 |
| BanI | GGYRCC | 1 cut(s) | 397 |
| BanII | GRGCYC | 1 cut(s) | 409 |
| BbvI | GCAGC | 1 cut(s) | 559 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 244, 278 |
| BciT130I | CCWGG | 1 cut(s) | 111 |
| BcoDI | GTCTC | 1 cut(s) | 321 |
| BfaI | CTAG | 1 cut(s) | 212 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 359, 570 |
| BisI | GCNGC | 5 cut(s) | 354, 545, 548, 599, 602 |
| BlsI | GCNGC | 5 cut(s) | 355, 546, 549, 600, 603 |
| Bme1390I | CCNGG | 1 cut(s) | 111 |
| Bme18I | GGWCC | 2 cut(s) | 334, 374 |
| BmgT120I | GGNCC | 3 cut(s) | 192, 334, 374 |
| BmiI | GGNNCC | 2 cut(s) | 174, 399 |
| BmrFI | CCNGG | 1 cut(s) | 111 |
| BmsI | GCATC | 3 cut(s) | 300, 433, 582 |
| BpuEI | CTTGAG | 2 cut(s) | 320, 578 |
| BsaBI | GATNNNNATC | 1 cut(s) | 44 |
| BsaJI | CCNNGG | 4 cut(s) | 288, 401, 565, 599 |
| BsaWI | WCCGGW | 1 cut(s) | 376 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 294 |
| Bse118I | RCCGGY | 3 cut(s) | 362, 556, 560 |
| Bse21I | CCTNAGG | 1 cut(s) | 188 |
| Bse3DI | GCAATG | 1 cut(s) | 442 |
| Bse8I | GATNNNNATC | 1 cut(s) | 44 |
| BseBI | CCWGG | 1 cut(s) | 111 |
| BseDI | CCNNGG | 4 cut(s) | 288, 401, 565, 599 |
| BseGI | GGATG | 2 cut(s) | 97, 390 |
| BseJI | GATNNNNATC | 1 cut(s) | 44 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 294 |
| BseMI | GCAATG | 1 cut(s) | 442 |
| BseMII | CTCAG | 2 cut(s) | 144, 447 |
| BseRI | GAGGAG | 3 cut(s) | 533, 536, 654 |
| BseX3I | CGGCCG | 2 cut(s) | 360, 558 |
| BseXI | GCAGC | 1 cut(s) | 559 |
| Bsh1236I | CGCG | 2 cut(s) | 356, 601 |
| Bsh1285I | CGRYCG | 2 cut(s) | 363, 561 |
| BshFI | GGCC | 5 cut(s) | 114, 193, 362, 560, 564 |
| BshNI | GGYRCC | 1 cut(s) | 397 |
| BsiEI | CGRYCG | 2 cut(s) | 363, 561 |
| BsiSI | CCGG | 4 cut(s) | 363, 377, 557, 561 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 294 |
| BsmAI | GTCTC | 1 cut(s) | 321 |
| BsmI | GAATGC | 1 cut(s) | 273 |
| BsnI | GGCC | 5 cut(s) | 114, 193, 362, 560, 564 |
| Bsp1286I | GDGCHC | 1 cut(s) | 409 |
| Bsp143I | GATC | 1 cut(s) | 45 |
| BspACI | CCGC | 9 cut(s) | 176, 354, 446, 506, 515, 544, 550, 599, 601 |
| BspANI | GGCC | 5 cut(s) | 114, 193, 362, 560, 564 |
| BspCNI | CTCAG | 2 cut(s) | 143, 448 |
| BspFNI | CGCG | 2 cut(s) | 356, 601 |
| BspLI | GGNNCC | 2 cut(s) | 174, 399 |
| BspT107I | GGYRCC | 1 cut(s) | 397 |
| BsrDI | GCAATG | 1 cut(s) | 442 |
| BsrFI | RCCGGY | 3 cut(s) | 362, 556, 560 |
| BssAI | RCCGGY | 3 cut(s) | 362, 556, 560 |
| BssECI | CCNNGG | 4 cut(s) | 288, 401, 565, 599 |
| BssMI | GATC | 1 cut(s) | 45 |
| BssT1I | CCWWGG | 1 cut(s) | 288 |
| Bst2UI | CCWGG | 1 cut(s) | 111 |
| Bst4CI | ACNGT | 1 cut(s) | 569 |
| Bst6I | CTCTTC | 3 cut(s) | 234, 253, 423 |
| BstC8I | GCNNGC | 2 cut(s) | 364, 562 |
| BstDEI | CTNAG | 3 cut(s) | 130, 188, 456 |
| BstDSI | CCRYGG | 2 cut(s) | 565, 599 |
| BstF5I | GGATG | 2 cut(s) | 97, 390 |
| BstFNI | CGCG | 2 cut(s) | 356, 601 |
| BstKTI | GATC | 1 cut(s) | 48 |
| BstMAI | GTCTC | 1 cut(s) | 321 |
| BstMBI | GATC | 1 cut(s) | 45 |
| BstMCI | CGRYCG | 2 cut(s) | 363, 561 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 359, 452, 512, 570, 610 |
| BstNI | CCWGG | 1 cut(s) | 111 |
| BstSCI | CCNGG | 1 cut(s) | 109 |
| BstUI | CGCG | 2 cut(s) | 356, 601 |
| BstV1I | GCAGC | 1 cut(s) | 559 |
| BstZI | CGGCCG | 2 cut(s) | 360, 558 |
| Bsu36I | CCTNAGG | 1 cut(s) | 188 |
| BsuRI | GGCC | 5 cut(s) | 114, 193, 362, 560, 564 |
| BtgI | CCRYGG | 2 cut(s) | 565, 599 |
| BtsCI | GGATG | 2 cut(s) | 97, 390 |
| BtsIMutI | CAGTG | 1 cut(s) | 55 |
| Cac8I | GCNNGC | 2 cut(s) | 364, 562 |
| CaiI | CAGNNNCTG | 1 cut(s) | 137 |
| Cfr10I | RCCGGY | 3 cut(s) | 362, 556, 560 |
| Cfr13I | GGNCC | 3 cut(s) | 192, 334, 374 |
| Cfr42I | CCGCGG | 1 cut(s) | 602 |
| CseI | GACGC | 1 cut(s) | 345 |
| Csp6I | GTAC | 1 cut(s) | 215 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 75, 110 |
| CviAII | CATG | 3 cut(s) | 116, 511, 605 |
| CviQI | GTAC | 1 cut(s) | 215 |
| DdeI | CTNAG | 3 cut(s) | 130, 188, 456 |
| DpnI | GATC | 1 cut(s) | 47 |
| DpnII | GATC | 1 cut(s) | 45 |
| EaeI | YGGCCR | 3 cut(s) | 360, 558, 562 |
| EagI | CGGCCG | 2 cut(s) | 360, 558 |
| Eam1104I | CTCTTC | 3 cut(s) | 234, 253, 423 |
| EarI | CTCTTC | 3 cut(s) | 234, 253, 423 |
| EciI | GGCGGA | 1 cut(s) | 530 |
| EclXI | CGGCCG | 2 cut(s) | 360, 558 |
| Eco130I | CCWWGG | 1 cut(s) | 288 |
| Eco24I | GRGCYC | 1 cut(s) | 409 |
| Eco47I | GGWCC | 2 cut(s) | 334, 374 |
| Eco52I | CGGCCG | 2 cut(s) | 360, 558 |
| Eco81I | CCTNAGG | 1 cut(s) | 188 |
| EcoRII | CCWGG | 1 cut(s) | 109 |
| EcoT14I | CCWWGG | 1 cut(s) | 288 |
| EcoT38I | GRGCYC | 1 cut(s) | 409 |
| ErhI | CCWWGG | 1 cut(s) | 288 |
| FaeI | CATG | 3 cut(s) | 119, 514, 608 |
| FaiI | YATR | 7 cut(s) | 117, 205, 467, 477, 479, 512, 606 |
| FatI | CATG | 3 cut(s) | 115, 510, 604 |
| Fnu4HI | GCNGC | 5 cut(s) | 354, 545, 548, 599, 602 |
| FokI | GGATG | 2 cut(s) | 104, 397 |
| FriOI | GRGCYC | 1 cut(s) | 409 |
| FseI | GGCCGGCC | 1 cut(s) | 564 |
| Fsp4HI | GCNGC | 5 cut(s) | 354, 545, 548, 599, 602 |
| FspBI | CTAG | 1 cut(s) | 212 |
| GluI | GCNGC | 5 cut(s) | 354, 545, 548, 599, 602 |
| HaeIII | GGCC | 5 cut(s) | 114, 193, 362, 560, 564 |
| HapII | CCGG | 4 cut(s) | 363, 377, 557, 561 |
| HgaI | GACGC | 1 cut(s) | 345 |
| Hin1II | CATG | 3 cut(s) | 119, 514, 608 |
| HinfI | GANTC | 1 cut(s) | 579 |
| HpaII | CCGG | 4 cut(s) | 363, 377, 557, 561 |
| HphI | GGTGA | 2 cut(s) | 49, 109 |
| Hpy188I | TCNGA | 5 cut(s) | 133, 334, 350, 370, 578 |
| Hpy188III | TCNNGA | 2 cut(s) | 233, 318 |
| Hpy99I | CGWCG | 1 cut(s) | 361 |
| HpyAV | CCTTC | 7 cut(s) | 70, 94, 315, 365, 382, 490, 632 |
| HpyCH4III | ACNGT | 1 cut(s) | 569 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 359, 452, 512, 570, 610 |
| HpyF3I | CTNAG | 3 cut(s) | 130, 188, 456 |
| Hsp92II | CATG | 3 cut(s) | 119, 514, 608 |
| KroI | GCCGGC | 2 cut(s) | 362, 560 |
| KroNI | GCCGGC | 2 cut(s) | 364, 562 |
| KspI | CCGCGG | 1 cut(s) | 602 |
| Kzo9I | GATC | 1 cut(s) | 45 |
| LmnI | GCTCC | 1 cut(s) | 667 |
| Lsp1109I | GCAGC | 1 cut(s) | 559 |
| LweI | GCATC | 3 cut(s) | 300, 433, 582 |
| MaeI | CTAG | 1 cut(s) | 212 |
| MalI | GATC | 1 cut(s) | 47 |
| MboI | GATC | 1 cut(s) | 45 |
| MboII | GAAGA | 6 cut(s) | 33, 55, 251, 270, 440, 647 |
| MfeI | CAATTG | 1 cut(s) | 12 |
| MhlI | GDGCHC | 1 cut(s) | 409 |
| MluCI | AATT | 4 cut(s) | 12, 419, 450, 645 |
| MlyI | GAGTC | 1 cut(s) | 588 |
| MnlI | CCTC | 8 cut(s) | 11, 229, 396, 453, 511, 514, 517, 602 |
| MroNI | GCCGGC | 2 cut(s) | 362, 560 |
| MslI | CAYNNNNRTG | 2 cut(s) | 150, 278 |
| MspA1I | CMGCKG | 2 cut(s) | 550, 601 |
| MspI | CCGG | 4 cut(s) | 363, 377, 557, 561 |
| MspR9I | CCNGG | 1 cut(s) | 111 |
| MunI | CAATTG | 1 cut(s) | 12 |
| Mva1269I | GAATGC | 1 cut(s) | 273 |
| MvaI | CCWGG | 1 cut(s) | 111 |
| MvnI | CGCG | 2 cut(s) | 356, 601 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 359, 452, 512, 570, 610 |
| NaeI | GCCGGC | 2 cut(s) | 364, 562 |
| NdeII | GATC | 1 cut(s) | 45 |
| NgoMIV | GCCGGC | 2 cut(s) | 362, 560 |
| NlaIII | CATG | 3 cut(s) | 119, 514, 608 |
| NlaIV | GGNNCC | 2 cut(s) | 174, 399 |
| NmeAIII | GCCGAG | 2 cut(s) | 279, 426 |
| OliI | CACNNNNGTG | 1 cut(s) | 150 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 338 |
| PctI | GAATGC | 1 cut(s) | 273 |
| PdiI | GCCGGC | 2 cut(s) | 364, 562 |
| PkrI | GCNGC | 5 cut(s) | 355, 546, 549, 600, 603 |
| PleI | GAGTC | 1 cut(s) | 587 |
| PpsI | GAGTC | 1 cut(s) | 587 |
| Psp6I | CCWGG | 1 cut(s) | 109 |
| PspGI | CCWGG | 1 cut(s) | 109 |
| PspN4I | GGNNCC | 2 cut(s) | 174, 399 |
| PspPI | GGNCC | 3 cut(s) | 192, 334, 374 |
| PstNI | CAGNNNCTG | 1 cut(s) | 137 |
| RigI | GGCCGGCC | 1 cut(s) | 564 |
| RsaI | GTAC | 1 cut(s) | 216 |
| RsaNI | GTAC | 1 cut(s) | 215 |
| RseI | CAYNNNNRTG | 2 cut(s) | 150, 278 |
| SacII | CCGCGG | 1 cut(s) | 602 |
| SatI | GCNGC | 5 cut(s) | 354, 545, 548, 599, 602 |
| Sau3AI | GATC | 1 cut(s) | 45 |
| Sau96I | GGNCC | 3 cut(s) | 192, 334, 374 |
| SchI | GAGTC | 1 cut(s) | 588 |
| ScrFI | CCNGG | 1 cut(s) | 111 |
| SduI | GDGCHC | 1 cut(s) | 409 |
| SfaNI | GCATC | 3 cut(s) | 300, 433, 582 |
| Sfr303I | CCGCGG | 1 cut(s) | 602 |
| SgrBI | CCGCGG | 1 cut(s) | 602 |
| SinI | GGWCC | 2 cut(s) | 334, 374 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 150, 278 |
| SmlI | CTYRAG | 2 cut(s) | 299, 593 |
| SmoI | CTYRAG | 2 cut(s) | 299, 593 |
| Sse9I | AATT | 4 cut(s) | 12, 419, 450, 645 |
| SsiI | CCGC | 9 cut(s) | 176, 354, 446, 506, 515, 544, 550, 599, 601 |
| SspMI | CTAG | 1 cut(s) | 212 |
| StyD4I | CCNGG | 1 cut(s) | 109 |
| StyI | CCWWGG | 1 cut(s) | 288 |
| TaaI | ACNGT | 1 cut(s) | 569 |
| TaqI | TCGA | 1 cut(s) | 319 |
| TasI | AATT | 4 cut(s) | 12, 419, 450, 645 |
| TatI | WGTACW | 1 cut(s) | 214 |
| TauI | GCSGC | 4 cut(s) | 356, 547, 601, 604 |
| TscAI | CASTG | 1 cut(s) | 55 |
| TseI | GCWGC | 1 cut(s) | 547 |
| TspDTI | ATGAA | 2 cut(s) | 56, 401 |
| TspRI | CASTG | 1 cut(s) | 55 |
| VpaK11BI | GGWCC | 2 cut(s) | 334, 374 |
| XapI | RAATTY | 1 cut(s) | 645 |
| XspI | CTAG | 1 cut(s) | 212 |