Prupe.3G175300_v2.0.a1

Conserved oligomeric Golgi complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0011987
Physical Location & Seq
Forward (+)
19218633 .. 19223648
5016 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G175300.1

Sequence Viewer

Length: 2490 bp
ATGGCTTCTCCGTCTCCAATCTCCTCAAGCGCTTCCCCACTGCAACGCCTTTCCACCTTCAAAACCTCCACCCCAACCTCCACCGCAACCCCAACCACCGCCACCGCATCCCCCCTTGACACATTGGCCTCCGACCCCATCTTCTCCGTCTTCCTCTCCTCCTCCTTCTCCTCCACCGACTTCTCCTCCGCCGCCCTCACCTCCGGCTCCCCCGCCTCCACCGCTGAGAAGCTCCAGAACGCCATCCGCCTCCTCGAGTCCCAGCTCCGCTCCGAGGTCCTCTCCCGCCACGACCACCTACTCTCCCAGCTCTCCTCCCTCCACCACGCAGACCACGCCCTCTCCACCGTCCGATCCTCCGTCCTCTCCCTCCAGTCCTCCCTCCGCCGCACCCGATCCGAGCTCTCCGACCCCCTTACCTCCATCCGCACCCTCACCGTCCAGCTCCAGAACCTCCACACCTCCTCCGACCTTCTCCACCACTCCATCAGAGCGCTTCGTCTCTCCAGTAAGCTCCGCTCTCTGGCGTCGGACGACCCCGAACGCCTGGATCTCGCCAAGGCCGCTCAGCTACATTGCGAGATCTTGGCACTCTACAACGAATATGACCTCGCCGGCATTGACGTAGTCGATGCCGAGCTCGAATGGGTCAGAGAGACCGGAGACAAGTTGCGCAATGAGGCGATGCGGGTTTTGGAGAGGGGGATGGAGGGTTTGAACCAGGCCGAGGTGGGTACTGGGTTGCAGGTGTTTTACAATTTGGGGGAGCTGAGACAGGCTATGGATCAGTTGATTAACAAGTATAAGGGTATGGGGGTAAAGACTGTTAGTGTGGCATTGGATATGAAGGCCATTTCCGGGTCGGGGGGAGGCGGGTTTGGGCCGGGGGGGATCAGAGGGGGCGGTGGGACGCCGCAGATTGGGGGCGGGGCCAAGGCGAGGGAGGCGATTTGGCAGAAGATTGGGAGTTGTCTGGATCAACTGCATTCAATCATGGTAGCAGTGTGGCACTTGCAGAGAGTGTTGTCTAAGAAGCGTGACCCGTTTACTCATGTGTTGCTGCTCGATGAGGTTATTCAGGAAGGTGAGCCCATAATAACAGATAGAGTGTGGGAGGCCCTTGTAAAGGCTTTTGCCAACCAAATGAAGTCTGCTTTCACTGCATCAAGTTTTGTTAAAGAGGTATTCACTATGGGGTATCCAAAGCTTTTCTCAATGATAGATAATCTTCTTGAAAGAATTGCACGTGACACAGACGTCAAAGGGGTTTTACCGGCTATTACTTCAGAGGGAAAGGAACAACTGGTGTCAGCTGTTGAAATATTCCAGACATCATTCTTGGCACACTGCTTGGGTCGTCTGTCAGACCTTGTGAATACTGTATTTCCAGTGTCCAGCCGTGGAAGTGTGCCCTCTAAAGAACATATCGCAAGAATCATAACACGGATTCAAGAAGAAATAGAAGCTGTTCAGTTGGATGGGCGATTGACTCTTCTTGTATTGCGTGAAATTGGCAAGGTTCTTCTCCTGCTTGCTGAACGGGCTGAATACCAGATATCAACTGGTCCTGAAGCACGTCAAGTCAGTGGTCCTGCAACTCCAGCACAACTCAAGAACTTCATTTTATGTCAGCATCTCCAAGAAATTCATACACGCGTATCATCTATAATTACAGGACTGCCCGCTATTGCTGCAGATGTATTGTCTCCCTCATTAGGTGCAATATATGGGGTTGCCTGTGACTCAGTGACGACCTTATTTCAAGCGATGCTTGACCGTCTTGAGTCTTGCATCTTGCAAATTCATGAGCAGAAATTTGGTGTGCTAGGCATGGATGCTGCTATGGACAACAATGCGTCACCTTACATGGAGGAGTTGCAGAAGTGCATTCTTCACTTCCGGAGCGAGTTCCTGTCTAGGCTGTTGCCTTCAAAAACTGCAACTGCCGGAGCAGAGACCATATGCACTAGGCTTGTTAGGAGCATGGCTGCACGGGTTTTAATATTCTTTATCAGGCATGCTTCTCTTGTCAGACCCCTTTCAGAATCAGGGAAGCTAAGGATGGCTAGGGACATGGCTGAGCTTGAATTAGCTGTAGGTCAAAATTTGTTCCCAGTAGAGCAACTTGGTGCACCATACAGAGCCCTTCGCGCATTTCGACCTCTTATTTTCTTGGAGACATCCCAACTTGGAGGATCTCCTCTCCTTCAAGATCTACCACCAAGCGTCATACTTCACCATCTTTACTCCCGAGGTCCCGATGAATTGCAGTCTCCGCTGCAAAGGAACAAACTAACACCTCTGCAGTACTCTTTGTGGCTAGATTCTCAAGGAGAGGATCAGGTCTGGAAGGGTATCAAAGCAACACTAGATGACTACGCCACACATGTGAGGGCTCGAGGAGACAAAGAGTTCAGCCCTGTCTATCCACTAATGATTCGACTAGGATCATCTTTGACTGAAAATGCTCCTGCAACCCAAAAGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
COG5

Protein Analysis

830

Amino Acids

90.65

Weight (kDa)

6.64

Isoelectric Point (pI)

49.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011987)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G67930
fragaria_vesca FvH4_6g38530
malus_domestica MD09G1149900.v1.1 MD17G1137000.v1.1
prunus_persica Prupe.3G175300_v2.0.a1 Prupe.3G175300_v2.0.a1
pyrus_communis pycom09g06940 pycom17g13060
rosa_chinensis RchiOBHm_Chr2g0151781
rosa_laevigata RLG00000020581
rosa_multiflora Rmu_co8286875.1_g000001
rosa_roxburghii Rroxscaffold_2G00096160
rosa_rugosa Rorug02G0429000
rosa_samantha Rh2AG489800 Rh2BG502400 Rh2CG476100 Rh2DG513500
rosa_wichuraiana Rw2G040160 Rw2G040270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 736
AasI GACNNNNNNGTC 1 cut(s) 1256
AatII GACGTC 1 cut(s) 1260
Acc16I TGCGCA 1 cut(s) 674
Acc36I ACCTGC 1 cut(s) 736
AccBSI CCGCTC 3 cut(s) 270, 519, 566
AccII CGCG 2 cut(s) 1656, 2151
AccIII TCCGGA 1 cut(s) 1899
AclWI GGATC 9 cut(s) 348, 390, 558, 792, 899, 984, 2203, 2346, 2455
AcsI RAATTY 4 cut(s) 1644, 1800, 1814, 2104
AcuI CTGAAG 2 cut(s) 1269, 1590
AcvI CACGTG 1 cut(s) 1247
AcyI GRCGYC 3 cut(s) 527, 911, 1257
AfaI GTAC 2 cut(s) 736, 2309
AfeI AGCGCT 2 cut(s) 31, 495
AfiI CCNNNNNNNGG 9 cut(s) 274, 523, 727, 858, 864, 920, 939, 1126, 1715
AflIII ACRYGT 2 cut(s) 1654, 2386
AjiI CACGTC 1 cut(s) 1577
AjnI CCWGG 2 cut(s) 546, 720
AleI CACNNNNGTG 1 cut(s) 2387
Alw21I GWGCWC 3 cut(s) 405, 642, 2134
Alw44I GTGCAC 1 cut(s) 2130
AlwI GGATC 9 cut(s) 348, 390, 558, 792, 899, 984, 2203, 2346, 2455
Ama87I CYCGRG 3 cut(s) 254, 2250, 2397
Aor13HI TCCGGA 1 cut(s) 1899
Aor51HI AGCGCT 2 cut(s) 31, 495
AoxI GGCC 7 cut(s) 126, 561, 723, 849, 881, 930, 1116
ApaLI GTGCAC 1 cut(s) 2130
ApeKI GCWGC 5 cut(s) 1060, 1691, 1838, 1988, 2278
ApoI RAATTY 4 cut(s) 1644, 1800, 1814, 2104
Asp700I GAANNNNTTC 1 cut(s) 1467
AspLEI GCGC 4 cut(s) 32, 496, 675, 2153
AspS9I GGNCC 7 cut(s) 277, 881, 930, 1117, 1565, 1589, 2255
AsuC2I CCSGG 2 cut(s) 859, 885
AsuHPI GGTGA 5 cut(s) 190, 427, 1097, 1851, 2228
AvaI CYCGRG 3 cut(s) 254, 2250, 2397
AvaII GGWCC 4 cut(s) 277, 1565, 1589, 2255
BaeGI GKGCMC 2 cut(s) 1413, 2134
BaeI ACNNNNGTAYC 2 cut(s) 1641, 1674
BanII GRGCYC 5 cut(s) 405, 642, 1092, 2146, 2398
BbrPI CACGTG 1 cut(s) 1247
BbsI GAAGAC 1 cut(s) 142
Bbv12I GWGCWC 3 cut(s) 405, 642, 2134
BbvI GCAGC 5 cut(s) 1047, 1678, 1825, 1975, 2265
BccI CCATC 8 cut(s) 146, 251, 431, 494, 700, 1472, 2056, 2247
BceAI ACGGC 1 cut(s) 1383
BciT130I CCWGG 2 cut(s) 548, 722
BciVI GTATCC 1 cut(s) 1209
BcnI CCSGG 2 cut(s) 859, 885
BfaI CTAG 7 cut(s) 1826, 1917, 1968, 2067, 2321, 2369, 2444
BfmI CTRYAG 3 cut(s) 1692, 2094, 2303
BfoI RGCGCY 2 cut(s) 33, 497
BfuAI ACCTGC 1 cut(s) 736
BfuI GTATCC 1 cut(s) 1209
BglII AGATCT 2 cut(s) 582, 2212
BisI GCNGC 9 cut(s) 192, 388, 564, 914, 1061, 1692, 1839, 1989, 2279
BlpI GCTNAGC 2 cut(s) 567, 2079
BlsI GCNGC 9 cut(s) 193, 389, 565, 915, 1062, 1693, 1840, 1990, 2280
BmcAI AGTACT 1 cut(s) 2309
Bme1390I CCNGG 4 cut(s) 548, 722, 859, 885
Bme18I GGWCC 4 cut(s) 277, 1565, 1589, 2255
BmeT110I CYCGRG 3 cut(s) 254, 2250, 2397
BmgBI CACGTC 1 cut(s) 1577
BmgT120I GGNCC 7 cut(s) 277, 881, 930, 1117, 1565, 1589, 2255
BmiI GGNNCC 3 cut(s) 208, 931, 2257
BmrFI CCNGG 4 cut(s) 548, 722, 859, 885
BmrI ACTGGG 2 cut(s) 747, 2108
BmsI GCATC 8 cut(s) 116, 622, 675, 1172, 1642, 1758, 1800, 1825
BmuI ACTGGG 2 cut(s) 747, 2108
BpiI GAAGAC 1 cut(s) 142
BplI GAGNNNNNCTC 2 cut(s) 266, 298
BpmI CTGGAG 5 cut(s) 218, 356, 431, 490, 1584
Bpu10I CCTNAGC 1 cut(s) 2057
Bpu1102I GCTNAGC 2 cut(s) 567, 2079
BpuEI CTTGAG 4 cut(s) 10, 1595, 1802, 2313
BpuMI CCSGG 2 cut(s) 859, 885
BsaAI YACGTR 1 cut(s) 1247
BsaHI GRCGYC 3 cut(s) 527, 911, 1257
BsaI GGTCTC 2 cut(s) 650, 1949
BsaJI CCNNGG 7 cut(s) 273, 558, 726, 884, 933, 1399, 2251
BsaWI WCCGGW 2 cut(s) 659, 1899
BsaXI ACNNNNNCTCC 8 cut(s) 170, 200, 287, 317, 326, 356, 449, 479
Bsc4I CCNNNNNNNGG 9 cut(s) 274, 523, 727, 858, 864, 920, 939, 1126, 1715
Bse118I RCCGGY 2 cut(s) 614, 1273
Bse1I ACTGG 7 cut(s) 373, 507, 742, 1308, 1388, 1567, 2114
Bse3DI GCAATG 2 cut(s) 574, 682
BseAI TCCGGA 1 cut(s) 1899
BseBI CCWGG 2 cut(s) 548, 722
BseDI CCNNGG 7 cut(s) 273, 558, 726, 884, 933, 1399, 2251
BseGI GGATG 8 cut(s) 107, 243, 423, 711, 1483, 1840, 2067, 2180
BseLI CCNNNNNNNGG 9 cut(s) 274, 523, 727, 858, 864, 920, 939, 1126, 1715
BseMI GCAATG 2 cut(s) 574, 682
BseMII CTCAG 5 cut(s) 216, 581, 761, 1758, 2070
BseNI ACTGG 7 cut(s) 373, 507, 742, 1308, 1388, 1567, 2114
BseSI GKGCMC 2 cut(s) 1413, 2134
BseXI GCAGC 5 cut(s) 1047, 1678, 1825, 1975, 2265
BseYI CCCAGC 2 cut(s) 261, 306
BsgI GTGCAG 1 cut(s) 1974
Bsh1236I CGCG 2 cut(s) 1656, 2151
BshFI GGCC 7 cut(s) 128, 563, 725, 851, 883, 932, 1118
BsiHKAI GWGCWC 3 cut(s) 405, 642, 2134
BsiHKCI CYCGRG 3 cut(s) 254, 2250, 2397
BsiSI CCGG 8 cut(s) 204, 615, 660, 858, 884, 1274, 1900, 1947
BslFI GGGAC 4 cut(s) 244, 922, 2084, 2241
BslI CCNNNNNNNGG 9 cut(s) 274, 523, 727, 858, 864, 920, 939, 1126, 1715
BsmBI CGTCTC 2 cut(s) 18, 506
BsmFI GGGAC 4 cut(s) 244, 922, 2084, 2241
BsmI GAATGC 2 cut(s) 985, 1887
BsnI GGCC 7 cut(s) 128, 563, 725, 851, 883, 932, 1118
Bso31I GGTCTC 2 cut(s) 650, 1949
BsoBI CYCGRG 3 cut(s) 254, 2250, 2397
Bsp1286I GDGCHC 7 cut(s) 405, 642, 1092, 1413, 2134, 2146, 2398
Bsp13I TCCGGA 1 cut(s) 1899
Bsp1720I GCTNAGC 2 cut(s) 567, 2079
BspANI GGCC 7 cut(s) 128, 563, 725, 851, 883, 932, 1118
BspCNI CTCAG 5 cut(s) 217, 580, 762, 1757, 2071
BspEI TCCGGA 1 cut(s) 1899
BspFNI CGCG 2 cut(s) 1656, 2151
BspHI TCATGA 1 cut(s) 1804
BspLI GGNNCC 3 cut(s) 208, 931, 2257
BspMAI CTGCAG 2 cut(s) 1696, 2307
BspMI ACCTGC 1 cut(s) 736
BspPI GGATC 9 cut(s) 348, 390, 558, 792, 899, 984, 2203, 2346, 2455
BspTNI GGTCTC 2 cut(s) 650, 1949
BsrBI CCGCTC 3 cut(s) 270, 519, 566
BsrDI GCAATG 2 cut(s) 574, 682
BsrFI RCCGGY 2 cut(s) 614, 1273
BsrI ACTGG 7 cut(s) 373, 507, 742, 1308, 1388, 1567, 2114
BssAI RCCGGY 2 cut(s) 614, 1273
BssECI CCNNGG 7 cut(s) 273, 558, 726, 884, 933, 1399, 2251
BssNI GRCGYC 3 cut(s) 527, 911, 1257
BssT1I CCWWGG 2 cut(s) 558, 933
Bst2UI CCWGG 2 cut(s) 548, 722
Bst4CI ACNGT 5 cut(s) 349, 439, 826, 1381, 1778
Bst6I CTCTTC 1 cut(s) 1497
BstACI GRCGYC 3 cut(s) 527, 911, 1257
BstBAI YACGTR 1 cut(s) 1247
BstC8I GCNNGC 4 cut(s) 616, 1533, 1683, 2019
BstDEI CTNAG 7 cut(s) 225, 567, 770, 1029, 1744, 2057, 2079
BstDSI CCRYGG 1 cut(s) 1399
BstENI CCTNNNNNAGG 1 cut(s) 1124
BstF5I GGATG 8 cut(s) 107, 243, 423, 711, 1483, 1840, 2067, 2180
BstFNI CGCG 2 cut(s) 1656, 2151
BstH2I RGCGCY 2 cut(s) 33, 497
BstHHI GCGC 4 cut(s) 32, 496, 675, 2153
BstNI CCWGG 2 cut(s) 548, 722
BstNSI RCATGY 2 cut(s) 2021, 2390
BstSCI CCNGG 4 cut(s) 546, 720, 857, 883
BstSFI CTRYAG 3 cut(s) 1692, 2094, 2303
BstSLI GKGCMC 2 cut(s) 1413, 2134
BstUI CGCG 2 cut(s) 1656, 2151
BstV1I GCAGC 5 cut(s) 1047, 1678, 1825, 1975, 2265
BstV2I GAAGAC 1 cut(s) 142
BstX2I RGATCY 4 cut(s) 550, 582, 2195, 2212
BstYI RGATCY 4 cut(s) 550, 582, 2195, 2212
BsuI GTATCC 1 cut(s) 1209
BsuRI GGCC 7 cut(s) 128, 563, 725, 851, 883, 932, 1118
BtgI CCRYGG 1 cut(s) 1399
BtgZI GCGATG 2 cut(s) 698, 1781
BtrI CACGTC 1 cut(s) 1577
BtsCI GGATG 8 cut(s) 107, 243, 423, 711, 1483, 1840, 2067, 2180
BtsI GCAGTG 4 cut(s) 38, 1008, 1158, 1345
BtsIMutI CAGTG 7 cut(s) 38, 1008, 1158, 1345, 1395, 1591, 1752
BveI ACCTGC 1 cut(s) 736
Cac8I GCNNGC 4 cut(s) 616, 1533, 1683, 2019
CciI TCATGA 1 cut(s) 1804
CfoI GCGC 4 cut(s) 32, 496, 675, 2153
Cfr10I RCCGGY 2 cut(s) 614, 1273
Cfr13I GGNCC 7 cut(s) 277, 881, 930, 1117, 1565, 1589, 2255
CseI GACGC 4 cut(s) 516, 919, 1845, 2215
Csp6I GTAC 2 cut(s) 735, 2308
CviAII CATG 9 cut(s) 994, 1052, 1805, 1831, 1867, 1984, 2018, 2074, 2387
CviQI GTAC 2 cut(s) 735, 2308
DdeI CTNAG 7 cut(s) 225, 567, 770, 1029, 1744, 2057, 2079
DrdI GACNNNNNNGTC 1 cut(s) 1256
DseDI GACNNNNNNGTC 1 cut(s) 1256
Eam1104I CTCTTC 1 cut(s) 1497
EarI CTCTTC 1 cut(s) 1497
EciI GGCGGA 3 cut(s) 178, 236, 374
Ecl136II GAGCTC 2 cut(s) 403, 640
Eco130I CCWWGG 2 cut(s) 558, 933
Eco24I GRGCYC 5 cut(s) 405, 642, 1092, 2146, 2398
Eco31I GGTCTC 2 cut(s) 650, 1949
Eco32I GATATC 1 cut(s) 1557
Eco47I GGWCC 4 cut(s) 277, 1565, 1589, 2255
Eco47III AGCGCT 2 cut(s) 31, 495
Eco53kI GAGCTC 2 cut(s) 403, 640
Eco57I CTGAAG 2 cut(s) 1269, 1590
Eco72I CACGTG 1 cut(s) 1247
Eco88I CYCGRG 3 cut(s) 254, 2250, 2397
EcoICRI GAGCTC 2 cut(s) 403, 640
EcoNI CCTNNNNNAGG 1 cut(s) 1124
EcoO109I RGGNCCY 3 cut(s) 277, 1117, 2255
EcoRII CCWGG 2 cut(s) 546, 720
EcoRV GATATC 1 cut(s) 1557
EcoT14I CCWWGG 2 cut(s) 558, 933
EcoT38I GRGCYC 5 cut(s) 405, 642, 1092, 2146, 2398
ErhI CCWWGG 2 cut(s) 558, 933
Esp3I CGTCTC 2 cut(s) 18, 506
FaeI CATG 9 cut(s) 997, 1055, 1808, 1834, 1870, 1987, 2021, 2077, 2390
FalI AAGNNNNNCTT 2 cut(s) 1755, 1787
FaqI GGGAC 4 cut(s) 244, 922, 2084, 2241
FatI CATG 9 cut(s) 993, 1051, 1804, 1830, 1866, 1983, 2017, 2073, 2386
FauI CCCGC 6 cut(s) 220, 293, 681, 866, 920, 1690
FauNDI CATATG 1 cut(s) 1961
Fnu4HI GCNGC 9 cut(s) 192, 388, 564, 914, 1061, 1692, 1839, 1989, 2279
FokI GGATG 8 cut(s) 94, 230, 410, 718, 1490, 1847, 2074, 2167
FriOI GRGCYC 5 cut(s) 405, 642, 1092, 2146, 2398
Fsp4HI GCNGC 9 cut(s) 192, 388, 564, 914, 1061, 1692, 1839, 1989, 2279
FspBI CTAG 7 cut(s) 1826, 1917, 1968, 2067, 2321, 2369, 2444
FspI TGCGCA 1 cut(s) 674
GlaI GCGC 4 cut(s) 31, 495, 674, 2152
GluI GCNGC 9 cut(s) 192, 388, 564, 914, 1061, 1692, 1839, 1989, 2279
GsaI CCCAGC 2 cut(s) 265, 310
GsuI CTGGAG 5 cut(s) 218, 356, 431, 490, 1584
HaeII RGCGCY 2 cut(s) 33, 497
HaeIII GGCC 7 cut(s) 128, 563, 725, 851, 883, 932, 1118
HapII CCGG 8 cut(s) 204, 615, 660, 858, 884, 1274, 1900, 1947
HgaI GACGC 4 cut(s) 516, 919, 1845, 2215
HhaI GCGC 4 cut(s) 32, 496, 675, 2153
Hin1I GRCGYC 3 cut(s) 527, 911, 1257
Hin1II CATG 9 cut(s) 997, 1055, 1808, 1834, 1870, 1987, 2021, 2077, 2390
Hin6I GCGC 4 cut(s) 30, 494, 673, 2151
HinP1I GCGC 4 cut(s) 30, 494, 673, 2151
HindIII AAGCTT 1 cut(s) 1205
HinfI GANTC 9 cut(s) 257, 1434, 1447, 1489, 1742, 1784, 2045, 2324, 2437
HpaII CCGG 8 cut(s) 204, 615, 660, 858, 884, 1274, 1900, 1947
HphI GGTGA 5 cut(s) 190, 427, 1097, 1851, 2228
Hpy166II GTNNAC 2 cut(s) 1047, 2132
Hpy8I GTNNAC 2 cut(s) 1047, 2132
Hpy99I CGWCG 1 cut(s) 532
HpyAV CCTTC 9 cut(s) 67, 175, 482, 841, 1076, 1938, 2156, 2216, 2344
HpyCH4III ACNGT 5 cut(s) 349, 439, 826, 1381, 1778
HpyCH4IV ACGT 4 cut(s) 624, 1246, 1257, 1576
HpyF3I CTNAG 7 cut(s) 225, 567, 770, 1029, 1744, 2057, 2079
HpySE526I ACGT 4 cut(s) 624, 1246, 1257, 1576
Hsp92I GRCGYC 3 cut(s) 527, 911, 1257
Hsp92II CATG 9 cut(s) 997, 1055, 1808, 1834, 1870, 1987, 2021, 2077, 2390
HspAI GCGC 4 cut(s) 30, 494, 673, 2151
Kpn2I TCCGGA 1 cut(s) 1899
KroI GCCGGC 1 cut(s) 614
KroNI GCCGGC 1 cut(s) 616
Lsp1109I GCAGC 5 cut(s) 1047, 1678, 1825, 1975, 2265
LweI GCATC 8 cut(s) 116, 622, 675, 1172, 1642, 1758, 1800, 1825
MaeI CTAG 7 cut(s) 1826, 1917, 1968, 2067, 2321, 2369, 2444
MaeII ACGT 4 cut(s) 624, 1246, 1257, 1576
MaeIII GTNAC 5 cut(s) 1037, 1247, 1739, 1747, 1857
MbiI CCGCTC 3 cut(s) 270, 519, 566
MboII GAAGA 8 cut(s) 133, 142, 970, 1220, 1466, 1484, 1514, 1883
MflI RGATCY 4 cut(s) 550, 582, 2195, 2212
MhlI GDGCHC 7 cut(s) 405, 642, 1092, 1413, 2134, 2146, 2398
MluI ACGCGT 1 cut(s) 1654
MlyI GAGTC 4 cut(s) 266, 1483, 1736, 1793
MmeI TCCRAC 5 cut(s) 156, 432, 492, 510, 1455
MroI TCCGGA 1 cut(s) 1899
MroNI GCCGGC 1 cut(s) 614
MroXI GAANNNNTTC 1 cut(s) 1467
MseI TTAA 3 cut(s) 795, 1176, 2000
MslI CAYNNNNRTG 1 cut(s) 2387
MspA1I CMGCKG 3 cut(s) 224, 1313, 2278
MspI CCGG 8 cut(s) 204, 615, 660, 858, 884, 1274, 1900, 1947
MspR9I CCNGG 4 cut(s) 548, 722, 859, 885
Mva1269I GAATGC 2 cut(s) 985, 1887
MvaI CCWGG 2 cut(s) 548, 722
MvnI CGCG 2 cut(s) 1656, 2151
NaeI GCCGGC 1 cut(s) 616
NciI CCSGG 2 cut(s) 859, 885
NdeI CATATG 1 cut(s) 1961
NgoMIV GCCGGC 1 cut(s) 614
NlaIII CATG 9 cut(s) 997, 1055, 1808, 1834, 1870, 1987, 2021, 2077, 2390
NlaIV GGNNCC 3 cut(s) 208, 931, 2257
NmeAIII GCCGAG 2 cut(s) 661, 751
NmuCI GTSAC 5 cut(s) 1037, 1247, 1739, 1747, 1857
NsbI TGCGCA 1 cut(s) 674
NspI RCATGY 2 cut(s) 2021, 2390
OliI CACNNNNGTG 1 cut(s) 2387
PaeI GCATGC 1 cut(s) 2021
PaeR7I CTCGAG 2 cut(s) 254, 2397
PagI TCATGA 1 cut(s) 1804
PaqCI CACCTGC 1 cut(s) 736
PciI ACATGT 1 cut(s) 2386
PcsI WCGNNNNNNNCGW 1 cut(s) 2155
PctI GAATGC 2 cut(s) 985, 1887
PdiI GCCGGC 1 cut(s) 616
PdmI GAANNNNTTC 1 cut(s) 1467
PfeI GAWTC 5 cut(s) 1434, 1447, 2045, 2324, 2437
PflFI GACNNNGTC 1 cut(s) 626
PkrI GCNGC 9 cut(s) 193, 389, 565, 915, 1062, 1693, 1840, 1990, 2280
PleI GAGTC 4 cut(s) 265, 1483, 1736, 1792
PmaCI CACGTG 1 cut(s) 1247
PmlI CACGTG 1 cut(s) 1247
PpsI GAGTC 4 cut(s) 265, 1483, 1736, 1792
Ppu21I YACGTR 1 cut(s) 1247
PpuMI RGGWCCY 2 cut(s) 277, 2255
PscI ACATGT 1 cut(s) 2386
Psp124BI GAGCTC 2 cut(s) 405, 642
Psp5II RGGWCCY 2 cut(s) 277, 2255
Psp6I CCWGG 2 cut(s) 546, 720
PspCI CACGTG 1 cut(s) 1247
PspFI CCCAGC 2 cut(s) 261, 306
PspGI CCWGG 2 cut(s) 546, 720
PspN4I GGNNCC 3 cut(s) 208, 931, 2257
PspPI GGNCC 7 cut(s) 277, 881, 930, 1117, 1565, 1589, 2255
PspPPI RGGWCCY 2 cut(s) 277, 2255
PspXI VCTCGAGB 2 cut(s) 254, 2397
PstI CTGCAG 2 cut(s) 1696, 2307
PsuI RGATCY 4 cut(s) 550, 582, 2195, 2212
PsyI GACNNNGTC 1 cut(s) 626
PvuII CAGCTG 1 cut(s) 1313
RsaI GTAC 2 cut(s) 736, 2309
RsaNI GTAC 2 cut(s) 735, 2308
RseI CAYNNNNRTG 1 cut(s) 2387
SacI GAGCTC 2 cut(s) 405, 642
SaqAI TTAA 3 cut(s) 795, 1176, 2000
SatI GCNGC 9 cut(s) 192, 388, 564, 914, 1061, 1692, 1839, 1989, 2279
Sau96I GGNCC 7 cut(s) 277, 881, 930, 1117, 1565, 1589, 2255
ScaI AGTACT 1 cut(s) 2309
SchI GAGTC 4 cut(s) 266, 1483, 1736, 1793
ScrFI CCNGG 4 cut(s) 548, 722, 859, 885
SduI GDGCHC 7 cut(s) 405, 642, 1092, 1413, 2134, 2146, 2398
SfaNI GCATC 8 cut(s) 116, 622, 675, 1172, 1642, 1758, 1800, 1825
SfcI CTRYAG 3 cut(s) 1692, 2094, 2303
Sfr274I CTCGAG 2 cut(s) 254, 2397
SinI GGWCC 4 cut(s) 277, 1565, 1589, 2255
SlaI CTCGAG 2 cut(s) 254, 2397
SmiMI CAYNNNNRTG 1 cut(s) 2387
SmlI CTYRAG 6 cut(s) 25, 254, 1610, 1781, 2328, 2397
SmoI CTYRAG 6 cut(s) 25, 254, 1610, 1781, 2328, 2397
SphI GCATGC 1 cut(s) 2021
SspI AATATT 2 cut(s) 1323, 2004
SspMI CTAG 7 cut(s) 1826, 1917, 1968, 2067, 2321, 2369, 2444
SstI GAGCTC 2 cut(s) 405, 642
StyD4I CCNGG 4 cut(s) 546, 720, 857, 883
StyI CCWWGG 2 cut(s) 558, 933
TaaI ACNGT 5 cut(s) 349, 439, 826, 1381, 1778
TaiI ACGT 4 cut(s) 627, 1249, 1260, 1579
TaqI TCGA 7 cut(s) 255, 630, 642, 1065, 2158, 2398, 2440
TatI WGTACW 1 cut(s) 2307
TauI GCSGC 4 cut(s) 194, 390, 566, 916
TfiI GAWTC 5 cut(s) 1434, 1447, 2045, 2324, 2437
Tru1I TTAA 3 cut(s) 795, 1176, 2000
Tru9I TTAA 3 cut(s) 795, 1176, 2000
TscAI CASTG 7 cut(s) 45, 1008, 1165, 1352, 1395, 1591, 1752
TseFI GTSAC 5 cut(s) 1037, 1247, 1739, 1747, 1857
TseI GCWGC 5 cut(s) 1060, 1691, 1838, 1988, 2278
Tsp45I GTSAC 5 cut(s) 1037, 1247, 1739, 1747, 1857
TspDTI ATGAA 6 cut(s) 860, 1160, 1609, 1637, 1793, 2277
TspGWI ACGGA 3 cut(s) 136, 349, 1459
TspRI CASTG 7 cut(s) 45, 1008, 1165, 1352, 1395, 1591, 1752
Tth111I GACNNNGTC 1 cut(s) 626
VneI GTGCAC 1 cut(s) 2130
VpaK11BI GGWCC 4 cut(s) 277, 1565, 1589, 2255
XagI CCTNNNNNAGG 1 cut(s) 1124
XapI RAATTY 4 cut(s) 1644, 1800, 1814, 2104
XceI RCATGY 2 cut(s) 2021, 2390
XcmI CCANNNNNNNNNTGG 1 cut(s) 1559
XhoI CTCGAG 2 cut(s) 254, 2397
XmnI GAANNNNTTC 1 cut(s) 1467
XspI CTAG 7 cut(s) 1826, 1917, 1968, 2067, 2321, 2369, 2444
ZraI GACGTC 1 cut(s) 1258
ZrmI AGTACT 1 cut(s) 2309
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.