RLG00000020581

Conserved oligomeric Golgi complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0011987
Physical Location & Seq
Forward (+)
66440664 .. 66444508
3845 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020581

Sequence Viewer

Length: 2463 bp
ATGGCCAGTTCTCCAGCCTCCACCGCATCTCCACTCCAACGCCTCTCCACCTTCAAAAGCCCACCCACCCCCGCCACCCCCGCCGCCTCCCCACTCGACACCTTCGCCGCCGATCCCATTTTCTCCGCCTTCCTCTCCCCCTCCTTCTCCTCCACCTCTTTCTCCTCCGCCGCCCTCTCCTCCGGCTCCCCCGCCTCCACCGCCGAGAAGCTCCAGAACGCCATCCGCCTCCTCGAGTCCCAGCTGCGCTCCGAGGTCCTCTCCCGCCACTCCGACCTCCTCTCCCAGCTCTCCTCCCTCCAGCACGCCGACCACGCCCTCTCCACCGTCCGATCCTCCGTCCACTCCCTCCAGTCCTCCCTCCGCCACACCCGATCCGAGCTCTCCGACCCCCTCCGCTCCATCACCGCCCTCACTCTCCAGCTCTCCAACCTCCACGCCACCTCCGAGCTCCTCCACCACACCCTCCGCGCCCTCCGCCTCTCCAAGAAGCTCCGCGACCTCGCCGCCGACCCCGAGAAGATCGATCTCGCCAAGGCCGCCCAGCTGCATTGCGAGATCTTGGCGCTCTACGACGAGTACGATCTCTCCGGCATCGAAGTCGTCGAGGAGGAGCTCGGCTGGGTCAGAGAGACCGGCGACAAGTTGCGCGGCGAGGCCATGAAGGCGTTGGAGCTAGGGATGGAGGGGTTGAATCAGGGGGAGGTGGCCATAGGGTTGCAGGTGTTTTACAATCTGGGAGAGCTGAAGCCGTCTATGGAGCAATTGATTGGGAAGTACAAGGGTATGGGAGTGAAGAGTATCAGTATGGCACTGGATATGAAGGCCATTTCCGGGTCGGTGGGAAGCGGGTTTGGGCCTGGAGGGATTAGAGGGAGTGGGACGCCGCAGATTGGCGGCGGAGCCAAGGCGAGGGATGGACTTTGGCAGAGAATGGGGACGTGTATGGATCAGTTGCATTCCATCATGGTTGCTGTGTGGCATTTGCAGAAGGTGTTGTCCAAGAAACGGGATCCTTTTACGCATGTGTTGCTGCTTGATGAAGTTATTAAGGAAGGGGAGCCCATGATAACAGATAGAGTGTGGGAGGCCCTTGTGAAGGCTTTTGCCAACCAAATGAAGTCTGCTTTCTCTGCATCAAGTTTTGTGAAAGAGATATTCACCATGGGGTATCCAAAGCTTTTTGCTATGATAGATAACCTTCTTGAAAGAATTTCACGTGACACAGATGTGAAAGGGGTTCTACCAGCTATTACTTCAGAGGGAAAAGAACAACTGGTTGCAGCTGTTGAAATTTTCCAGAATTCATTCTTGGCTCTCTGCCTTAGTCGTCTGTCAGATCTTGTGAATACTGTATTTCCTGTATCAAGCCGTGGGAGTGTTCCCTCTAAAGACCATATCTCAAGAATCATTGCACGCATTCAGGAAGAAATTGAATCTGTTCAGTTGGATGCGCGCCTGACTCTTCTTGTATTGCGTGAGATTGGCAAGGTTCTTCTACTGCTTTCTGAACGAGCTGAATACCAGATATCAACTGGTCCTGAATCACGCCAAGTCAATGGTCCTGCAACTCCAGCCCAACTCAAGAACTTCATGCTATGTCAGCATCTCCAGGAAATTCATACACGCATATCGTCAATGATTAGTGGACTGCCCACTATTGCCTCAGATGTGCTGTCCCCGGCATTAGGTGCAATATATGGGGTTGCTTGTGACTCAGTGACAACCTTGTTCCAAGCCATGCTTGATCGTCTTGAATCTTGCATCTTGCAAATTCATGAACAGAAGTTTGGTGTGCTAGGCATGGATGCTGCTATGGATAACAATGCATCACCTTACATGGAGGAGTTGCAGAAGTGCATTCTTCACTTCCGGAGTGAGTTCCTATCTAGGCTGTTGCCTTCAAAAAATGCCGCTGTGGGAGTAGAGACCATATGCACCAGACTTGTTAGAAGCATGGCTGCACGGGTTTTAATATTTTTTATCAGGCACGCTTCTCTTGTCAGACCCCTTTCAGAATCAGGGAAGCTAAGGATGGCTAGGGACATGGCTGAGCTGGAATTAGCTGTTGGCCAAAATTTGTTCCCAGTAGAGCAACTTGGTGCACCATATAGAGCTCTTCGAGCATTTCGGCCTCTCATTTTCTTGGACACATCCCAACTTGGAGCATCTCCTCTTCTTCAAGATCTACCACCAAGTGTCATACTTCACCATCTATACTCCCGAGGTCCTGATGAATTGCAATCGCCTCTACAAAGGAACAAACTAACACCTCTACAATACTCCTTGTGGCTAGATTCTCAAGGAGAGGACCAGGTTTGGAAGGGAATTAAGGCAACACTAGATGACTATGCTACACATGTAAGGGCCAGAGGAGACAAAGAGTTTAGCCCTGTGTATCCTCTAATGCTTCGACTGGGGTCATTGTTGACAGAAAACGCTCCTGTGACCCGAAAGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
COG5

Protein Analysis

821

Amino Acids

89.87

Weight (kDa)

6.74

Isoelectric Point (pI)

52.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COG5_N PF10392 42 - 165 3.4e-25 Conserved oligomeric Golgi complex subunit 5, N-terminal
COG5_C PF20649 196 - 401 1.4e-50 Conserved oligomeric Golgi complex subunit 5, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011987)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G67930
fragaria_vesca FvH4_6g38530
malus_domestica MD09G1149900.v1.1 MD17G1137000.v1.1
prunus_persica Prupe.3G175300_v2.0.a1 Prupe.3G175300_v2.0.a1
pyrus_communis pycom09g06940 pycom17g13060
rosa_chinensis RchiOBHm_Chr2g0151781
rosa_laevigata RLG00000020581
rosa_multiflora Rmu_co8286875.1_g000001
rosa_roxburghii Rroxscaffold_2G00096160
rosa_rugosa Rorug02G0429000
rosa_samantha Rh2AG489800 Rh2BG502400 Rh2CG476100 Rh2DG513500
rosa_wichuraiana Rw2G040160 Rw2G040270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 712
Acc36I ACCTGC 1 cut(s) 712
AccBSI CCGCTC 1 cut(s) 399
AccII CGCG 4 cut(s) 471, 498, 651, 1456
AccIII TCCGGA 1 cut(s) 1872
AclWI GGATC 6 cut(s) 107, 327, 369, 957, 1007, 1020
AcoI YGGCCR 3 cut(s) 3, 708, 2071
AcsI RAATTY 6 cut(s) 1212, 1293, 1303, 1617, 1773, 2077
AcuI CTGAAG 2 cut(s) 767, 1242
AcvI CACGTG 1 cut(s) 1220
AcyI GRCGYC 1 cut(s) 884
AdeI CACNNNGTG 1 cut(s) 2198
AfaI GTAC 2 cut(s) 581, 779
AfiI CCNNNNNNNGG 6 cut(s) 834, 893, 912, 1008, 1099, 1688
AflIII ACRYGT 2 cut(s) 941, 2359
AgsI TTSAA 8 cut(s) 55, 694, 1208, 1292, 1436, 1757, 1905, 2183
AjiI CACGTC 1 cut(s) 942
AjnI CCWGG 3 cut(s) 859, 1611, 2313
AjuI GAANNNNNNNTTGG 6 cut(s) 1295, 1327, 1773, 1805, 2052, 2084
AleI CACNNNNGTG 1 cut(s) 1229
Alw21I GWGCWC 5 cut(s) 384, 453, 618, 2107, 2119
Alw26I GTCTC 3 cut(s) 626, 1922, 2370
Alw44I GTGCAC 1 cut(s) 2103
AlwI GGATC 6 cut(s) 107, 327, 369, 957, 1007, 1020
Ama87I CYCGRG 3 cut(s) 233, 515, 2223
Aor13HI TCCGGA 1 cut(s) 1872
ApaLI GTGCAC 1 cut(s) 2103
ApeKI GCWGC 6 cut(s) 244, 547, 1033, 1283, 1811, 1961
ApoI RAATTY 6 cut(s) 1212, 1293, 1303, 1617, 1773, 2077
Asp700I GAANNNNTTC 2 cut(s) 1307, 1440
AspLEI GCGC 6 cut(s) 249, 473, 568, 651, 1456, 1458
AspS9I GGNCC 8 cut(s) 256, 857, 1090, 1538, 1562, 2228, 2311, 2367
AsuC2I CCSGG 2 cut(s) 835, 1682
AsuHPI GGTGA 4 cut(s) 397, 1153, 1824, 2201
AvaI CYCGRG 3 cut(s) 233, 515, 2223
AvaII GGWCC 5 cut(s) 256, 1538, 1562, 2228, 2311
BaeGI GKGCMC 1 cut(s) 2107
BalI TGGCCA 3 cut(s) 5, 710, 2073
BamHI GGATCC 1 cut(s) 1012
BanII GRGCYC 5 cut(s) 384, 453, 618, 1065, 2119
BbrPI CACGTG 1 cut(s) 1220
Bbv12I GWGCWC 5 cut(s) 384, 453, 618, 2107, 2119
BbvI GCAGC 6 cut(s) 231, 534, 1020, 1295, 1798, 1948
BccI CCATC 7 cut(s) 230, 410, 676, 911, 971, 2029, 2220
BceAI ACGGC 2 cut(s) 736, 1356
BcgI CGANNNNNNTGC 2 cut(s) 583, 617
BciT130I CCWGG 3 cut(s) 861, 1613, 2315
BciVI GTATCC 2 cut(s) 1182, 2409
BcnI CCSGG 2 cut(s) 835, 1682
BcoDI GTCTC 3 cut(s) 626, 1922, 2370
BfaI CTAG 6 cut(s) 677, 1799, 1890, 2040, 2294, 2342
BfoI RGCGCY 1 cut(s) 569
BfuAI ACCTGC 1 cut(s) 712
BfuI GTATCC 2 cut(s) 1182, 2409
BglI GCCNNNNNGGC 1 cut(s) 665
BglII AGATCT 3 cut(s) 558, 1339, 2185
BlpI GCTNAGC 1 cut(s) 2052
Bme1390I CCNGG 5 cut(s) 835, 861, 1613, 1682, 2315
Bme18I GGWCC 5 cut(s) 256, 1538, 1562, 2228, 2311
BmeT110I CYCGRG 3 cut(s) 233, 515, 2223
BmgBI CACGTC 1 cut(s) 942
BmgT120I GGNCC 8 cut(s) 256, 857, 1090, 1538, 1562, 2228, 2311, 2367
BmiI GGNNCC 4 cut(s) 187, 904, 1014, 1062
BmrFI CCNGG 5 cut(s) 835, 861, 1613, 1682, 2315
BmrI ACTGGG 2 cut(s) 2081, 2426
BmsI GCATC 9 cut(s) 35, 603, 1145, 1441, 1615, 1773, 1798, 1838, 2177
BmuI ACTGGG 2 cut(s) 2081, 2426
BoxI GACNNNNGTC 1 cut(s) 2419
BplI GAGNNNNNCTC 2 cut(s) 245, 277
BpmI CTGGAG 7 cut(s) 197, 284, 335, 404, 882, 1557, 1595
Bpu10I CCTNAGC 1 cut(s) 2030
Bpu1102I GCTNAGC 1 cut(s) 2052
BpuEI CTTGAG 3 cut(s) 1387, 1568, 2286
BpuMI CCSGG 2 cut(s) 835, 1682
Bsa29I ATCGAT 1 cut(s) 525
BsaAI YACGTR 1 cut(s) 1220
BsaHI GRCGYC 1 cut(s) 884
BsaI GGTCTC 2 cut(s) 626, 1922
BsaJI CCNNGG 7 cut(s) 252, 534, 906, 1164, 1372, 1680, 2224
BsaWI WCCGGW 1 cut(s) 1872
Bsc4I CCNNNNNNNGG 6 cut(s) 834, 893, 912, 1008, 1099, 1688
Bse118I RCCGGY 1 cut(s) 635
Bse1I ACTGG 7 cut(s) 6, 352, 819, 1281, 1540, 2087, 2421
Bse3DI GCAATG 2 cut(s) 550, 1410
BseAI TCCGGA 1 cut(s) 1872
BseBI CCWGG 3 cut(s) 861, 1613, 2315
BseCI ATCGAT 1 cut(s) 525
BseDI CCNNGG 7 cut(s) 252, 534, 906, 1164, 1372, 1680, 2224
BseGI GGATG 7 cut(s) 222, 687, 922, 1456, 1813, 2040, 2153
BseLI CCNNNNNNNGG 6 cut(s) 834, 893, 912, 1008, 1099, 1688
BseMI GCAATG 2 cut(s) 550, 1410
BseMII CTCAG 3 cut(s) 1680, 1731, 2043
BseNI ACTGG 7 cut(s) 6, 352, 819, 1281, 1540, 2087, 2421
BsePI GCGCGC 1 cut(s) 1454
BseSI GKGCMC 1 cut(s) 2107
BseXI GCAGC 6 cut(s) 231, 534, 1020, 1295, 1798, 1948
BseYI CCCAGC 4 cut(s) 240, 285, 543, 621
BsgI GTGCAG 1 cut(s) 1947
Bsh1236I CGCG 4 cut(s) 471, 498, 651, 1456
BshVI ATCGAT 1 cut(s) 525
BsiHKAI GWGCWC 5 cut(s) 384, 453, 618, 2107, 2119
BsiHKCI CYCGRG 3 cut(s) 233, 515, 2223
BsiSI CCGG 6 cut(s) 183, 591, 636, 834, 1682, 1873
BslFI GGGAC 5 cut(s) 223, 895, 952, 1663, 2057
BslI CCNNNNNNNGG 6 cut(s) 834, 893, 912, 1008, 1099, 1688
BsmAI GTCTC 3 cut(s) 626, 1922, 2370
BsmFI GGGAC 5 cut(s) 223, 895, 952, 1663, 2057
BsmI GAATGC 3 cut(s) 958, 1419, 1860
Bso31I GGTCTC 2 cut(s) 626, 1922
BsoBI CYCGRG 3 cut(s) 233, 515, 2223
Bsp1286I GDGCHC 6 cut(s) 384, 453, 618, 1065, 2107, 2119
Bsp13I TCCGGA 1 cut(s) 1872
Bsp1720I GCTNAGC 1 cut(s) 2052
Bsp19I CCATGG 1 cut(s) 1164
BspCNI CTCAG 3 cut(s) 1679, 1730, 2044
BspDI ATCGAT 1 cut(s) 525
BspEI TCCGGA 1 cut(s) 1872
BspFNI CGCG 4 cut(s) 471, 498, 651, 1456
BspHI TCATGA 1 cut(s) 1777
BspLI GGNNCC 4 cut(s) 187, 904, 1014, 1062
BspMI ACCTGC 1 cut(s) 712
BspPI GGATC 6 cut(s) 107, 327, 369, 957, 1007, 1020
BspQI GCTCTTC 1 cut(s) 2124
BspTNI GGTCTC 2 cut(s) 626, 1922
BsrBI CCGCTC 1 cut(s) 399
BsrDI GCAATG 2 cut(s) 550, 1410
BsrFI RCCGGY 1 cut(s) 635
BsrI ACTGG 7 cut(s) 6, 352, 819, 1281, 1540, 2087, 2421
BssAI RCCGGY 1 cut(s) 635
BssECI CCNNGG 7 cut(s) 252, 534, 906, 1164, 1372, 1680, 2224
BssHII GCGCGC 1 cut(s) 1454
BssNI GRCGYC 1 cut(s) 884
BssT1I CCWWGG 3 cut(s) 534, 906, 1164
Bst2UI CCWGG 3 cut(s) 861, 1613, 2315
Bst4CI ACNGT 2 cut(s) 328, 1354
Bst6I CTCTTC 4 cut(s) 791, 1470, 2124, 2181
BstACI GRCGYC 1 cut(s) 884
BstAPI GCANNNNNTGC 2 cut(s) 1030, 1691
BstBAI YACGTR 1 cut(s) 1220
BstC8I GCNNGC 4 cut(s) 306, 1417, 1456, 1992
BstDEI CTNAG 5 cut(s) 1325, 1666, 1717, 2030, 2052
BstDSI CCRYGG 2 cut(s) 1164, 1372
BstENI CCTNNNNNAGG 1 cut(s) 1097
BstF5I GGATG 7 cut(s) 222, 687, 922, 1456, 1813, 2040, 2153
BstFNI CGCG 4 cut(s) 471, 498, 651, 1456
BstH2I RGCGCY 1 cut(s) 569
BstHHI GCGC 6 cut(s) 249, 473, 568, 651, 1456, 1458
BstMAI GTCTC 3 cut(s) 626, 1922, 2370
BstNI CCWGG 3 cut(s) 861, 1613, 2315
BstNSI RCATGY 2 cut(s) 1028, 2363
BstPAI GACNNNNGTC 1 cut(s) 2419
BstSCI CCNGG 5 cut(s) 833, 859, 1611, 1680, 2313
BstSLI GKGCMC 1 cut(s) 2107
BstUI CGCG 4 cut(s) 471, 498, 651, 1456
BstV1I GCAGC 6 cut(s) 231, 534, 1020, 1295, 1798, 1948
BstX2I RGATCY 4 cut(s) 558, 1012, 1339, 2185
BstXI CCANNNNNNTGG 1 cut(s) 1559
BstYI RGATCY 4 cut(s) 558, 1012, 1339, 2185
Bsu15I ATCGAT 1 cut(s) 525
BsuI GTATCC 2 cut(s) 1182, 2409
BsuTUI ATCGAT 1 cut(s) 525
BtgI CCRYGG 2 cut(s) 1164, 1372
BtrI CACGTC 1 cut(s) 942
BtsCI GGATG 7 cut(s) 222, 687, 922, 1456, 1813, 2040, 2153
BtsIMutI CAGTG 2 cut(s) 812, 1725
BveI ACCTGC 1 cut(s) 712
Cac8I GCNNGC 4 cut(s) 306, 1417, 1456, 1992
CciI TCATGA 1 cut(s) 1777
CfoI GCGC 6 cut(s) 249, 473, 568, 651, 1456, 1458
Cfr10I RCCGGY 1 cut(s) 635
Cfr13I GGNCC 8 cut(s) 256, 857, 1090, 1538, 1562, 2228, 2311, 2367
ClaI ATCGAT 1 cut(s) 525
CseI GACGC 1 cut(s) 892
CsiI ACCWGGT 1 cut(s) 2313
Csp6I GTAC 2 cut(s) 580, 778
CviQI GTAC 2 cut(s) 580, 778
DdeI CTNAG 5 cut(s) 1325, 1666, 1717, 2030, 2052
DraIII CACNNNGTG 1 cut(s) 2198
EaeI YGGCCR 3 cut(s) 3, 708, 2071
Eam1104I CTCTTC 4 cut(s) 791, 1470, 2124, 2181
EarI CTCTTC 4 cut(s) 791, 1470, 2124, 2181
EciI GGCGGA 6 cut(s) 115, 157, 215, 353, 467, 915
Ecl136II GAGCTC 4 cut(s) 382, 451, 616, 2117
Eco130I CCWWGG 3 cut(s) 534, 906, 1164
Eco24I GRGCYC 5 cut(s) 384, 453, 618, 1065, 2119
Eco31I GGTCTC 2 cut(s) 626, 1922
Eco32I GATATC 1 cut(s) 1530
Eco47I GGWCC 5 cut(s) 256, 1538, 1562, 2228, 2311
Eco53kI GAGCTC 4 cut(s) 382, 451, 616, 2117
Eco57I CTGAAG 2 cut(s) 767, 1242
Eco72I CACGTG 1 cut(s) 1220
Eco88I CYCGRG 3 cut(s) 233, 515, 2223
EcoICRI GAGCTC 4 cut(s) 382, 451, 616, 2117
EcoNI CCTNNNNNAGG 1 cut(s) 1097
EcoO109I RGGNCCY 3 cut(s) 256, 1090, 2228
EcoRI GAATTC 1 cut(s) 1303
EcoRII CCWGG 3 cut(s) 859, 1611, 2313
EcoRV GATATC 1 cut(s) 1530
EcoT14I CCWWGG 3 cut(s) 534, 906, 1164
EcoT22I ATGCAT 1 cut(s) 1831
EcoT38I GRGCYC 5 cut(s) 384, 453, 618, 1065, 2119
ErhI CCWWGG 3 cut(s) 534, 906, 1164
FalI AAGNNNNNCTT 2 cut(s) 1728, 1760
FaqI GGGAC 5 cut(s) 223, 895, 952, 1663, 2057
FauI CCCGC 5 cut(s) 79, 88, 199, 272, 842
FauNDI CATATG 1 cut(s) 1934
FokI GGATG 7 cut(s) 209, 694, 929, 1463, 1820, 2047, 2140
FriOI GRGCYC 5 cut(s) 384, 453, 618, 1065, 2119
FspBI CTAG 6 cut(s) 677, 1799, 1890, 2040, 2294, 2342
GlaI GCGC 6 cut(s) 248, 472, 567, 650, 1455, 1457
GsaI CCCAGC 4 cut(s) 244, 289, 547, 625
GsuI CTGGAG 7 cut(s) 197, 284, 335, 404, 882, 1557, 1595
HaeII RGCGCY 1 cut(s) 569
HapII CCGG 6 cut(s) 183, 591, 636, 834, 1682, 1873
HgaI GACGC 1 cut(s) 892
HhaI GCGC 6 cut(s) 249, 473, 568, 651, 1456, 1458
Hin1I GRCGYC 1 cut(s) 884
Hin6I GCGC 6 cut(s) 247, 471, 566, 649, 1454, 1456
HinP1I GCGC 6 cut(s) 247, 471, 566, 649, 1454, 1456
HincII GTYRAC 1 cut(s) 2430
HindII GTYRAC 1 cut(s) 2430
HindIII AAGCTT 1 cut(s) 1178
HpaII CCGG 6 cut(s) 183, 591, 636, 834, 1682, 1873
HphI GGTGA 4 cut(s) 397, 1153, 1824, 2201
Hpy166II GTNNAC 4 cut(s) 343, 1649, 2105, 2430
Hpy8I GTNNAC 4 cut(s) 343, 1649, 2105, 2430
Hpy99I CGWCG 2 cut(s) 578, 608
HpyCH4III ACNGT 2 cut(s) 328, 1354
HpyCH4IV ACGT 2 cut(s) 941, 1219
HpyF3I CTNAG 5 cut(s) 1325, 1666, 1717, 2030, 2052
HpySE526I ACGT 2 cut(s) 941, 1219
Hsp92I GRCGYC 1 cut(s) 884
HspAI GCGC 6 cut(s) 247, 471, 566, 649, 1454, 1456
Kpn2I TCCGGA 1 cut(s) 1872
LguI GCTCTTC 1 cut(s) 2124
Lsp1109I GCAGC 6 cut(s) 231, 534, 1020, 1295, 1798, 1948
LweI GCATC 9 cut(s) 35, 603, 1145, 1441, 1615, 1773, 1798, 1838, 2177
MabI ACCWGGT 1 cut(s) 2313
MaeI CTAG 6 cut(s) 677, 1799, 1890, 2040, 2294, 2342
MaeII ACGT 2 cut(s) 941, 1219
MaeIII GTNAC 4 cut(s) 1220, 1712, 1720, 2446
MbiI CCGCTC 1 cut(s) 399
MboII GAAGA 9 cut(s) 532, 808, 1439, 1457, 1487, 1856, 2111, 2168, 2171
MfeI CAATTG 1 cut(s) 764
MflI RGATCY 4 cut(s) 558, 1012, 1339, 2185
MhlI GDGCHC 6 cut(s) 384, 453, 618, 1065, 2107, 2119
MlsI TGGCCA 3 cut(s) 5, 710, 2073
MluNI TGGCCA 3 cut(s) 5, 710, 2073
MlyI GAGTC 3 cut(s) 245, 1456, 1709
MmeI TCCRAC 6 cut(s) 61, 297, 411, 453, 651, 1428
Mox20I TGGCCA 3 cut(s) 5, 710, 2073
Mph1103I ATGCAT 1 cut(s) 1831
MroI TCCGGA 1 cut(s) 1872
MroXI GAANNNNTTC 2 cut(s) 1307, 1440
MscI TGGCCA 3 cut(s) 5, 710, 2073
MseI TTAA 3 cut(s) 1050, 1973, 2331
MslI CAYNNNNRTG 1 cut(s) 1229
Msp20I TGGCCA 3 cut(s) 5, 710, 2073
MspA1I CMGCKG 4 cut(s) 244, 547, 1286, 1916
MspI CCGG 6 cut(s) 183, 591, 636, 834, 1682, 1873
MspR9I CCNGG 5 cut(s) 835, 861, 1613, 1682, 2315
MunI CAATTG 1 cut(s) 764
Mva1269I GAATGC 3 cut(s) 958, 1419, 1860
MvaI CCWGG 3 cut(s) 861, 1613, 2315
MvnI CGCG 4 cut(s) 471, 498, 651, 1456
NciI CCSGG 2 cut(s) 835, 1682
NcoI CCATGG 1 cut(s) 1164
NdeI CATATG 1 cut(s) 1934
NlaIV GGNNCC 4 cut(s) 187, 904, 1014, 1062
NmeAIII GCCGAG 2 cut(s) 229, 597
NmuCI GTSAC 4 cut(s) 1220, 1712, 1720, 2446
NsiI ATGCAT 1 cut(s) 1831
NspI RCATGY 2 cut(s) 1028, 2363
OliI CACNNNNGTG 1 cut(s) 1229
PaeR7I CTCGAG 1 cut(s) 233
PagI TCATGA 1 cut(s) 1777
PaqCI CACCTGC 1 cut(s) 712
PauI GCGCGC 1 cut(s) 1454
PciI ACATGT 1 cut(s) 2359
PciSI GCTCTTC 1 cut(s) 2124
PcsI WCGNNNNNNNCGW 3 cut(s) 444, 579, 603
PctI GAATGC 3 cut(s) 958, 1419, 1860
PdmI GAANNNNTTC 2 cut(s) 1307, 1440
PfeI GAWTC 7 cut(s) 694, 1407, 1436, 1544, 1757, 2018, 2297
PfoI TCCNGGA 1 cut(s) 1611
PleI GAGTC 3 cut(s) 244, 1456, 1709
PmaCI CACGTG 1 cut(s) 1220
PmlI CACGTG 1 cut(s) 1220
PpsI GAGTC 3 cut(s) 244, 1456, 1709
Ppu21I YACGTR 1 cut(s) 1220
PpuMI RGGWCCY 2 cut(s) 256, 2228
PscI ACATGT 1 cut(s) 2359
PshAI GACNNNNGTC 1 cut(s) 2419
Psp124BI GAGCTC 4 cut(s) 384, 453, 618, 2119
Psp5II RGGWCCY 2 cut(s) 256, 2228
Psp6I CCWGG 3 cut(s) 859, 1611, 2313
PspCI CACGTG 1 cut(s) 1220
PspFI CCCAGC 4 cut(s) 240, 285, 543, 621
PspGI CCWGG 3 cut(s) 859, 1611, 2313
PspN4I GGNNCC 4 cut(s) 187, 904, 1014, 1062
PspPI GGNCC 8 cut(s) 256, 857, 1090, 1538, 1562, 2228, 2311, 2367
PspPPI RGGWCCY 2 cut(s) 256, 2228
PspXI VCTCGAGB 1 cut(s) 233
PsuI RGATCY 4 cut(s) 558, 1012, 1339, 2185
PteI GCGCGC 1 cut(s) 1454
PvuII CAGCTG 3 cut(s) 244, 547, 1286
RsaI GTAC 2 cut(s) 581, 779
RsaNI GTAC 2 cut(s) 580, 778
RseI CAYNNNNRTG 1 cut(s) 1229
SacI GAGCTC 4 cut(s) 384, 453, 618, 2119
SapI GCTCTTC 1 cut(s) 2124
SaqAI TTAA 3 cut(s) 1050, 1973, 2331
Sau96I GGNCC 8 cut(s) 256, 857, 1090, 1538, 1562, 2228, 2311, 2367
SchI GAGTC 3 cut(s) 245, 1456, 1709
ScrFI CCNGG 5 cut(s) 835, 861, 1613, 1682, 2315
SduI GDGCHC 6 cut(s) 384, 453, 618, 1065, 2107, 2119
SexAI ACCWGGT 1 cut(s) 2313
SfaNI GCATC 9 cut(s) 35, 603, 1145, 1441, 1615, 1773, 1798, 1838, 2177
Sfr274I CTCGAG 1 cut(s) 233
SinI GGWCC 5 cut(s) 256, 1538, 1562, 2228, 2311
SlaI CTCGAG 1 cut(s) 233
SmiMI CAYNNNNRTG 1 cut(s) 1229
SmlI CTYRAG 4 cut(s) 233, 1402, 1583, 2301
SmoI CTYRAG 4 cut(s) 233, 1402, 1583, 2301
SspI AATATT 1 cut(s) 1977
SspMI CTAG 6 cut(s) 677, 1799, 1890, 2040, 2294, 2342
SstI GAGCTC 4 cut(s) 384, 453, 618, 2119
StyD4I CCNGG 5 cut(s) 833, 859, 1611, 1680, 2313
StyI CCWWGG 3 cut(s) 534, 906, 1164
TaaI ACNGT 2 cut(s) 328, 1354
TaiI ACGT 2 cut(s) 944, 1222
TaqI TCGA 7 cut(s) 96, 234, 525, 597, 606, 2122, 2413
TatI WGTACW 1 cut(s) 777
TauI GCSGC 9 cut(s) 86, 110, 173, 509, 542, 654, 889, 900, 1916
TfiI GAWTC 7 cut(s) 694, 1407, 1436, 1544, 1757, 2018, 2297
Tru1I TTAA 3 cut(s) 1050, 1973, 2331
Tru9I TTAA 3 cut(s) 1050, 1973, 2331
TscAI CASTG 2 cut(s) 819, 1725
TseFI GTSAC 4 cut(s) 1220, 1712, 1720, 2446
TseI GCWGC 6 cut(s) 244, 547, 1033, 1283, 1811, 1961
Tsp45I GTSAC 4 cut(s) 1220, 1712, 1720, 2446
TspGWI ACGGA 1 cut(s) 328
TspRI CASTG 2 cut(s) 819, 1725
VneI GTGCAC 1 cut(s) 2103
VpaK11BI GGWCC 5 cut(s) 256, 1538, 1562, 2228, 2311
XagI CCTNNNNNAGG 1 cut(s) 1097
XapI RAATTY 6 cut(s) 1212, 1293, 1303, 1617, 1773, 2077
XceI RCATGY 2 cut(s) 1028, 2363
XcmI CCANNNNNNNNNTGG 2 cut(s) 667, 1532
XhoI CTCGAG 1 cut(s) 233
XmnI GAANNNNTTC 2 cut(s) 1307, 1440
XspI CTAG 6 cut(s) 677, 1799, 1890, 2040, 2294, 2342
Zsp2I ATGCAT 1 cut(s) 1831
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.