Rw2G040270

Conserved oligomeric Golgi complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0011987
Physical Location & Seq
Forward (+)
65786244 .. 65789159
2916 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G040270.1

Sequence Viewer

Length: 1644 bp
ATGAAGGCCATTTCCGGGTCGGTGGGAAGCGGGTTTGGGCCTGGAGGGATTAGAGGGAGTGGGACGCCGCAGATTGGCGGCGGGGCCAAGGCGAGGGATGGGCTTTGGCAGAGAATGGGGACGTGTATGGATCAGTTGCATTCCATCATGGTTGCTGTGTGGCACCTGCAGAAGGTGTTGTCCAAGAAACGGGATCCGTTTACGCATGTGTTGCTACTTGATGAAGTTATTAAGGAAGGGGAGCCCAAGATAACAGATAGAGTGTGGGAGGCCCTTGTGAAGGCTTTTGCCAACCAAATGAAGTCTGCTTTCTCTGCATCAAGTTTTGTGAAAGAGATATTCACCATGGGGTATCCAAAGCTTTTTGCTATGATAGATAACCTTCTTGAAAGAATTTCACGTGACACAGATGTGAAAGGGGTTCTACCAGCTATTACTTCAGAGGGAAAAGAACAACTGGTTGCAGCTGTTGAAATTTTCCAGAATTCATTCTTGGCTCTCTGCCTTAGTCGTCTGTCAGATCTTGTGAATACTGTATTTCCTGTATCAAGCCGTGGGAGTGTTCCCTCTAAAGACCATATCTCAAGAATCATTGCACGGATTCAGGAAGAAATTGAATCTGTTCAGTTGGATGCGCGCCTGACTCTTCTTGTATTGCGTGAGATCGGCAAGGTTCTTCTACTGCTTTCTGAACGAGCTGAATACCAGATATCAACTGGTCCTGAATCACGCCAAGTCAATGGTCCTGCAACTCCAGCCCAACTCAAGAACTTCATGCTATGTCAGCATCTCCAGGAAATTCATACACGCATATCGTCAATGATTAGTGGACTGCCCACTATTGCCTCAGATGTGCTGTCCCCGGCATTAGGTGCAATATATGGGGTTGCTTGTGACTCAGTGACAACCTTGTTCCAAGCCATGCTTGATCGTCTTGAATCTTGCATCTTGCAAATTCATGAACAGAAGTTTGGTGTGCTAGGCATGGATGCTGCTATGGATAACAATGCATCACCTTACATGGAGGAGTTGCAGAAGTGCATTCTTCACTTCCGGAGTGAGTTCCTATCTAGGCTGTTGCCTTCAAAAACTGCCGCTGTGGGAGTAGAGACCATATGCACCAGACTTGTTAGAAGCATGGCTGCACGGGTTTTAATATTTTTTATCAGGCACGCTTCTCTTGTCAGACCACTTTCAGAATCAGGGAAGCTAAGGATGGCTAGGGACATGGCTGAGCTGGAATTAGCTGTTGGCCAAAATTTGTTCCCAGTAGAGCAACTTGGTGCACCATATAGAGCTCTTCGAGCATTTCGGCCTCTCATTTTCTTGGACACATCCCAACTTGGAGCATCTCCTCTTCTTCAAGATCTACCACCAAGTGTCATACTTCACCATCTATACTCCCGAGGTCCCGATGAATTGCAATCGCCTCTACAAAGGAACAAACTAACACCTCTGCAATACTCCTTGTGGCTAGATTCTCAAGGAGAGGACCAGGTTTGGAAGGGTATTAAGGCAACACTAGATGACTATGCTATACATGTAAGGGCCAGAGGAGACAAAGAGTTTAGCCCTGTGTATCCTCTAATGCTTCGACTGGGGTCATTGTTGACAGAAAACGCTCCTGTGACCCAAAAGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
COG5

Protein Analysis

547

Amino Acids

60.44

Weight (kDa)

8.37

Isoelectric Point (pI)

49.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
COG5_C PF20649 29 - 128 9.4e-29 Conserved oligomeric Golgi complex subunit 5, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011987)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G67930
fragaria_vesca FvH4_6g38530
malus_domestica MD09G1149900.v1.1 MD17G1137000.v1.1
prunus_persica Prupe.3G175300_v2.0.a1 Prupe.3G175300_v2.0.a1
pyrus_communis pycom09g06940 pycom17g13060
rosa_chinensis RchiOBHm_Chr2g0151781
rosa_laevigata RLG00000020581
rosa_multiflora Rmu_co8286875.1_g000001
rosa_roxburghii Rroxscaffold_2G00096160
rosa_rugosa Rorug02G0429000
rosa_samantha Rh2AG489800 Rh2BG502400 Rh2CG476100 Rh2DG513500
rosa_wichuraiana Rw2G040160 Rw2G040270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 174
Acc36I ACCTGC 1 cut(s) 174
AccB1I GGYRCC 1 cut(s) 162
AccII CGCG 1 cut(s) 637
AccIII TCCGGA 1 cut(s) 1053
AciI CCGC 5 cut(s) 30, 68, 78, 81, 1095
AclWI GGATC 3 cut(s) 138, 188, 201
AcoI YGGCCR 1 cut(s) 1252
AcsI RAATTY 6 cut(s) 393, 474, 484, 798, 954, 1258
AcuI CTGAAG 1 cut(s) 423
AcvI CACGTG 1 cut(s) 401
AcyI GRCGYC 1 cut(s) 65
AdeI CACNNNGTG 1 cut(s) 1379
AfiI CCNNNNNNNGG 7 cut(s) 15, 74, 93, 172, 189, 280, 869
AflIII ACRYGT 2 cut(s) 122, 1540
AgsI TTSAA 6 cut(s) 389, 473, 617, 938, 1086, 1364
AjiI CACGTC 1 cut(s) 123
AjnI CCWGG 3 cut(s) 40, 792, 1494
AjuI GAANNNNNNNTTGG 6 cut(s) 476, 508, 954, 986, 1233, 1265
AleI CACNNNNGTG 1 cut(s) 410
AluBI AGCT 8 cut(s) 361, 431, 467, 698, 1210, 1237, 1247, 1298
AluI AGCT 8 cut(s) 361, 431, 467, 698, 1210, 1237, 1247, 1298
Alw21I GWGCWC 2 cut(s) 1288, 1300
Alw26I GTCTC 2 cut(s) 1103, 1551
Alw44I GTGCAC 1 cut(s) 1284
AlwI GGATC 3 cut(s) 138, 188, 201
Ama87I CYCGRG 1 cut(s) 1404
Aor13HI TCCGGA 1 cut(s) 1053
AoxI GGCC 7 cut(s) 6, 38, 84, 270, 1252, 1313, 1548
ApaLI GTGCAC 1 cut(s) 1284
ApeKI GCWGC 3 cut(s) 464, 992, 1142
ApoI RAATTY 6 cut(s) 393, 474, 484, 798, 954, 1258
Asp700I GAANNNNTTC 2 cut(s) 488, 621
AspLEI GCGC 2 cut(s) 637, 639
AspS9I GGNCC 8 cut(s) 38, 84, 271, 719, 743, 1409, 1492, 1548
AsuC2I CCSGG 2 cut(s) 16, 863
AsuHPI GGTGA 3 cut(s) 334, 1005, 1382
AvaI CYCGRG 1 cut(s) 1404
AvaII GGWCC 4 cut(s) 719, 743, 1409, 1492
BaeGI GKGCMC 1 cut(s) 1288
BalI TGGCCA 1 cut(s) 1254
BamHI GGATCC 1 cut(s) 193
BanI GGYRCC 1 cut(s) 162
BanII GRGCYC 2 cut(s) 246, 1300
BbrPI CACGTG 1 cut(s) 401
Bbv12I GWGCWC 2 cut(s) 1288, 1300
BbvI GCAGC 3 cut(s) 476, 979, 1129
BccI CCATC 4 cut(s) 92, 152, 1210, 1401
BceAI ACGGC 1 cut(s) 537
BciT130I CCWGG 3 cut(s) 42, 794, 1496
BciVI GTATCC 2 cut(s) 363, 1590
BcnI CCSGG 2 cut(s) 16, 863
BcoDI GTCTC 2 cut(s) 1103, 1551
BfaI CTAG 5 cut(s) 980, 1071, 1221, 1475, 1523
BfmI CTRYAG 1 cut(s) 167
BfuAI ACCTGC 1 cut(s) 174
BfuI GTATCC 2 cut(s) 363, 1590
BglII AGATCT 2 cut(s) 520, 1366
BisI GCNGC 6 cut(s) 68, 79, 465, 993, 1095, 1143
BlpI GCTNAGC 1 cut(s) 1233
BlsI GCNGC 6 cut(s) 69, 80, 466, 994, 1096, 1144
Bme1390I CCNGG 5 cut(s) 16, 42, 794, 863, 1496
Bme18I GGWCC 4 cut(s) 719, 743, 1409, 1492
BmeT110I CYCGRG 1 cut(s) 1404
BmgBI CACGTC 1 cut(s) 123
BmgT120I GGNCC 8 cut(s) 38, 84, 271, 719, 743, 1409, 1492, 1548
BmiI GGNNCC 5 cut(s) 85, 164, 195, 243, 1411
BmrFI CCNGG 5 cut(s) 16, 42, 794, 863, 1496
BmrI ACTGGG 2 cut(s) 1262, 1607
BmsI GCATC 7 cut(s) 326, 622, 796, 954, 979, 1019, 1358
BmuI ACTGGG 2 cut(s) 1262, 1607
BoxI GACNNNNGTC 1 cut(s) 1600
BpmI CTGGAG 3 cut(s) 63, 738, 776
Bpu10I CCTNAGC 1 cut(s) 1211
Bpu1102I GCTNAGC 1 cut(s) 1233
BpuEI CTTGAG 3 cut(s) 568, 749, 1467
BpuMI CCSGG 2 cut(s) 16, 863
BsaAI YACGTR 1 cut(s) 401
BsaHI GRCGYC 1 cut(s) 65
BsaI GGTCTC 1 cut(s) 1103
BsaJI CCNNGG 5 cut(s) 87, 345, 553, 861, 1405
BsaWI WCCGGW 1 cut(s) 1053
Bsc4I CCNNNNNNNGG 7 cut(s) 15, 74, 93, 172, 189, 280, 869
Bse1I ACTGG 4 cut(s) 462, 721, 1268, 1602
Bse3DI GCAATG 1 cut(s) 591
BseAI TCCGGA 1 cut(s) 1053
BseBI CCWGG 3 cut(s) 42, 794, 1496
BseDI CCNNGG 5 cut(s) 87, 345, 553, 861, 1405
BseGI GGATG 5 cut(s) 103, 637, 994, 1221, 1334
BseLI CCNNNNNNNGG 7 cut(s) 15, 74, 93, 172, 189, 280, 869
BseMI GCAATG 1 cut(s) 591
BseMII CTCAG 3 cut(s) 861, 912, 1224
BseNI ACTGG 4 cut(s) 462, 721, 1268, 1602
BsePI GCGCGC 1 cut(s) 635
BseRI GAGGAG 3 cut(s) 1040, 1344, 1569
BseSI GKGCMC 1 cut(s) 1288
BseXI GCAGC 3 cut(s) 476, 979, 1129
BsgI GTGCAG 1 cut(s) 1128
Bsh1236I CGCG 1 cut(s) 637
BshFI GGCC 7 cut(s) 8, 40, 86, 272, 1254, 1315, 1550
BshNI GGYRCC 1 cut(s) 162
BsiHKAI GWGCWC 2 cut(s) 1288, 1300
BsiHKCI CYCGRG 1 cut(s) 1404
BsiSI CCGG 3 cut(s) 15, 863, 1054
BslFI GGGAC 5 cut(s) 76, 133, 844, 1238, 1395
BslI CCNNNNNNNGG 7 cut(s) 15, 74, 93, 172, 189, 280, 869
BsmAI GTCTC 2 cut(s) 1103, 1551
BsmFI GGGAC 5 cut(s) 76, 133, 844, 1238, 1395
BsmI GAATGC 2 cut(s) 139, 1041
BsnI GGCC 7 cut(s) 8, 40, 86, 272, 1254, 1315, 1550
Bso31I GGTCTC 1 cut(s) 1103
BsoBI CYCGRG 1 cut(s) 1404
Bsp1286I GDGCHC 3 cut(s) 246, 1288, 1300
Bsp13I TCCGGA 1 cut(s) 1053
Bsp143I GATC 6 cut(s) 130, 193, 520, 663, 928, 1366
Bsp1720I GCTNAGC 1 cut(s) 1233
Bsp19I CCATGG 1 cut(s) 345
BspACI CCGC 5 cut(s) 30, 68, 78, 81, 1095
BspANI GGCC 7 cut(s) 8, 40, 86, 272, 1254, 1315, 1550
BspCNI CTCAG 3 cut(s) 860, 911, 1225
BspEI TCCGGA 1 cut(s) 1053
BspFNI CGCG 1 cut(s) 637
BspHI TCATGA 1 cut(s) 958
BspLI GGNNCC 5 cut(s) 85, 164, 195, 243, 1411
BspMAI CTGCAG 1 cut(s) 171
BspMI ACCTGC 1 cut(s) 174
BspPI GGATC 3 cut(s) 138, 188, 201
BspQI GCTCTTC 1 cut(s) 1305
BspT107I GGYRCC 1 cut(s) 162
BspTNI GGTCTC 1 cut(s) 1103
BsrDI GCAATG 1 cut(s) 591
BsrI ACTGG 4 cut(s) 462, 721, 1268, 1602
BssECI CCNNGG 5 cut(s) 87, 345, 553, 861, 1405
BssHII GCGCGC 1 cut(s) 635
BssMI GATC 6 cut(s) 130, 193, 520, 663, 928, 1366
BssNI GRCGYC 1 cut(s) 65
BssT1I CCWWGG 2 cut(s) 87, 345
Bst2UI CCWGG 3 cut(s) 42, 794, 1496
Bst4CI ACNGT 1 cut(s) 535
Bst6I CTCTTC 3 cut(s) 651, 1305, 1362
BstACI GRCGYC 1 cut(s) 65
BstAPI GCANNNNNTGC 2 cut(s) 211, 872
BstBAI YACGTR 1 cut(s) 401
BstC8I GCNNGC 2 cut(s) 637, 1173
BstDEI CTNAG 5 cut(s) 506, 847, 898, 1211, 1233
BstDSI CCRYGG 2 cut(s) 345, 553
BstENI CCTNNNNNAGG 2 cut(s) 170, 278
BstF5I GGATG 5 cut(s) 103, 637, 994, 1221, 1334
BstFNI CGCG 1 cut(s) 637
BstHHI GCGC 2 cut(s) 637, 639
BstKTI GATC 6 cut(s) 133, 196, 523, 666, 931, 1369
BstMAI GTCTC 2 cut(s) 1103, 1551
BstMBI GATC 6 cut(s) 130, 193, 520, 663, 928, 1366
BstMWI GCNNNNNNNGC 6 cut(s) 211, 314, 755, 784, 872, 1304
BstNI CCWGG 3 cut(s) 42, 794, 1496
BstNSI RCATGY 2 cut(s) 209, 1544
BstPAI GACNNNNGTC 1 cut(s) 1600
BstSCI CCNGG 5 cut(s) 14, 40, 792, 861, 1494
BstSFI CTRYAG 1 cut(s) 167
BstSLI GKGCMC 1 cut(s) 1288
BstUI CGCG 1 cut(s) 637
BstV1I GCAGC 3 cut(s) 476, 979, 1129
BstX2I RGATCY 3 cut(s) 193, 520, 1366
BstXI CCANNNNNNTGG 1 cut(s) 740
BstYI RGATCY 3 cut(s) 193, 520, 1366
BsuI GTATCC 2 cut(s) 363, 1590
BsuRI GGCC 7 cut(s) 8, 40, 86, 272, 1254, 1315, 1550
BtgI CCRYGG 2 cut(s) 345, 553
BtrI CACGTC 1 cut(s) 123
BtsCI GGATG 5 cut(s) 103, 637, 994, 1221, 1334
BtsIMutI CAGTG 1 cut(s) 906
BveI ACCTGC 1 cut(s) 174
Cac8I GCNNGC 2 cut(s) 637, 1173
CciI TCATGA 1 cut(s) 958
CfoI GCGC 2 cut(s) 637, 639
Cfr13I GGNCC 8 cut(s) 38, 84, 271, 719, 743, 1409, 1492, 1548
CseI GACGC 1 cut(s) 73
CsiI ACCWGGT 1 cut(s) 1494
DdeI CTNAG 5 cut(s) 506, 847, 898, 1211, 1233
DpnI GATC 6 cut(s) 132, 195, 522, 665, 930, 1368
DpnII GATC 6 cut(s) 130, 193, 520, 663, 928, 1366
DraIII CACNNNGTG 1 cut(s) 1379
EaeI YGGCCR 1 cut(s) 1252
Eam1104I CTCTTC 3 cut(s) 651, 1305, 1362
EarI CTCTTC 3 cut(s) 651, 1305, 1362
Ecl136II GAGCTC 1 cut(s) 1298
Eco130I CCWWGG 2 cut(s) 87, 345
Eco24I GRGCYC 2 cut(s) 246, 1300
Eco31I GGTCTC 1 cut(s) 1103
Eco32I GATATC 1 cut(s) 711
Eco47I GGWCC 4 cut(s) 719, 743, 1409, 1492
Eco53kI GAGCTC 1 cut(s) 1298
Eco57I CTGAAG 1 cut(s) 423
Eco72I CACGTG 1 cut(s) 401
Eco88I CYCGRG 1 cut(s) 1404
EcoICRI GAGCTC 1 cut(s) 1298
EcoNI CCTNNNNNAGG 2 cut(s) 170, 278
EcoO109I RGGNCCY 2 cut(s) 271, 1409
EcoRI GAATTC 1 cut(s) 484
EcoRII CCWGG 3 cut(s) 40, 792, 1494
EcoRV GATATC 1 cut(s) 711
EcoT14I CCWWGG 2 cut(s) 87, 345
EcoT22I ATGCAT 1 cut(s) 1012
EcoT38I GRGCYC 2 cut(s) 246, 1300
ErhI CCWWGG 2 cut(s) 87, 345
FalI AAGNNNNNCTT 2 cut(s) 909, 941
FaqI GGGAC 5 cut(s) 76, 133, 844, 1238, 1395
FauI CCCGC 2 cut(s) 23, 74
FauNDI CATATG 1 cut(s) 1115
Fnu4HI GCNGC 6 cut(s) 68, 79, 465, 993, 1095, 1143
FokI GGATG 5 cut(s) 110, 644, 1001, 1228, 1321
FriOI GRGCYC 2 cut(s) 246, 1300
Fsp4HI GCNGC 6 cut(s) 68, 79, 465, 993, 1095, 1143
FspBI CTAG 5 cut(s) 980, 1071, 1221, 1475, 1523
GlaI GCGC 2 cut(s) 636, 638
GluI GCNGC 6 cut(s) 68, 79, 465, 993, 1095, 1143
GsuI CTGGAG 3 cut(s) 63, 738, 776
HaeIII GGCC 7 cut(s) 8, 40, 86, 272, 1254, 1315, 1550
HapII CCGG 3 cut(s) 15, 863, 1054
HgaI GACGC 1 cut(s) 73
HhaI GCGC 2 cut(s) 637, 639
Hin1I GRCGYC 1 cut(s) 65
Hin6I GCGC 2 cut(s) 635, 637
HinP1I GCGC 2 cut(s) 635, 637
HincII GTYRAC 1 cut(s) 1611
HindII GTYRAC 1 cut(s) 1611
HindIII AAGCTT 1 cut(s) 359
HinfI GANTC 9 cut(s) 588, 601, 617, 643, 725, 896, 938, 1199, 1478
HpaII CCGG 3 cut(s) 15, 863, 1054
HphI GGTGA 3 cut(s) 334, 1005, 1382
Hpy166II GTNNAC 4 cut(s) 201, 830, 1286, 1611
Hpy188I TCNGA 6 cut(s) 442, 520, 691, 850, 1187, 1198
Hpy8I GTNNAC 4 cut(s) 201, 830, 1286, 1611
HpyAV CCTTC 6 cut(s) 166, 230, 274, 392, 1092, 1498
HpyCH4III ACNGT 1 cut(s) 535
HpyCH4IV ACGT 2 cut(s) 122, 400
HpyF10VI GCNNNNNNNGC 6 cut(s) 211, 314, 755, 784, 872, 1304
HpyF3I CTNAG 5 cut(s) 506, 847, 898, 1211, 1233
HpySE526I ACGT 2 cut(s) 122, 400
Hsp92I GRCGYC 1 cut(s) 65
HspAI GCGC 2 cut(s) 635, 637
Kpn2I TCCGGA 1 cut(s) 1053
Kzo9I GATC 6 cut(s) 130, 193, 520, 663, 928, 1366
LguI GCTCTTC 1 cut(s) 1305
LmnI GCTCC 3 cut(s) 241, 1346, 1627
Lsp1109I GCAGC 3 cut(s) 476, 979, 1129
LweI GCATC 7 cut(s) 326, 622, 796, 954, 979, 1019, 1358
MabI ACCWGGT 1 cut(s) 1494
MaeI CTAG 5 cut(s) 980, 1071, 1221, 1475, 1523
MaeII ACGT 2 cut(s) 122, 400
MaeIII GTNAC 4 cut(s) 401, 893, 901, 1627
MalI GATC 6 cut(s) 132, 195, 522, 665, 930, 1368
MboI GATC 6 cut(s) 130, 193, 520, 663, 928, 1366
MboII GAAGA 7 cut(s) 620, 638, 668, 1037, 1292, 1349, 1352
MflI RGATCY 3 cut(s) 193, 520, 1366
MhlI GDGCHC 3 cut(s) 246, 1288, 1300
MlsI TGGCCA 1 cut(s) 1254
MluCI AATT 9 cut(s) 393, 474, 484, 612, 798, 954, 1241, 1258, 1418
MluNI TGGCCA 1 cut(s) 1254
MlyI GAGTC 2 cut(s) 637, 890
MmeI TCCRAC 1 cut(s) 609
Mox20I TGGCCA 1 cut(s) 1254
Mph1103I ATGCAT 1 cut(s) 1012
MroI TCCGGA 1 cut(s) 1053
MroXI GAANNNNTTC 2 cut(s) 488, 621
MscI TGGCCA 1 cut(s) 1254
MseI TTAA 3 cut(s) 231, 1154, 1512
MslI CAYNNNNRTG 1 cut(s) 410
Msp20I TGGCCA 1 cut(s) 1254
MspA1I CMGCKG 2 cut(s) 467, 1097
MspI CCGG 3 cut(s) 15, 863, 1054
MspR9I CCNGG 5 cut(s) 16, 42, 794, 863, 1496
Mva1269I GAATGC 2 cut(s) 139, 1041
MvaI CCWGG 3 cut(s) 42, 794, 1496
MvnI CGCG 1 cut(s) 637
MwoI GCNNNNNNNGC 6 cut(s) 211, 314, 755, 784, 872, 1304
NciI CCSGG 2 cut(s) 16, 863
NcoI CCATGG 1 cut(s) 345
NdeI CATATG 1 cut(s) 1115
NdeII GATC 6 cut(s) 130, 193, 520, 663, 928, 1366
NlaIV GGNNCC 5 cut(s) 85, 164, 195, 243, 1411
NmuCI GTSAC 4 cut(s) 401, 893, 901, 1627
NsiI ATGCAT 1 cut(s) 1012
NspI RCATGY 2 cut(s) 209, 1544
OliI CACNNNNGTG 1 cut(s) 410
PagI TCATGA 1 cut(s) 958
PaqCI CACCTGC 1 cut(s) 174
PauI GCGCGC 1 cut(s) 635
PciI ACATGT 1 cut(s) 1540
PciSI GCTCTTC 1 cut(s) 1305
PctI GAATGC 2 cut(s) 139, 1041
PdmI GAANNNNTTC 2 cut(s) 488, 621
PfeI GAWTC 7 cut(s) 588, 601, 617, 725, 938, 1199, 1478
PfoI TCCNGGA 1 cut(s) 792
PkrI GCNGC 6 cut(s) 69, 80, 466, 994, 1096, 1144
PleI GAGTC 2 cut(s) 637, 890
PmaCI CACGTG 1 cut(s) 401
PmlI CACGTG 1 cut(s) 401
PpsI GAGTC 2 cut(s) 637, 890
Ppu21I YACGTR 1 cut(s) 401
PpuMI RGGWCCY 1 cut(s) 1409
PscI ACATGT 1 cut(s) 1540
PshAI GACNNNNGTC 1 cut(s) 1600
Psp124BI GAGCTC 1 cut(s) 1300
Psp5II RGGWCCY 1 cut(s) 1409
Psp6I CCWGG 3 cut(s) 40, 792, 1494
PspCI CACGTG 1 cut(s) 401
PspGI CCWGG 3 cut(s) 40, 792, 1494
PspN4I GGNNCC 5 cut(s) 85, 164, 195, 243, 1411
PspPI GGNCC 8 cut(s) 38, 84, 271, 719, 743, 1409, 1492, 1548
PspPPI RGGWCCY 1 cut(s) 1409
PstI CTGCAG 1 cut(s) 171
PsuI RGATCY 3 cut(s) 193, 520, 1366
PteI GCGCGC 1 cut(s) 635
PvuII CAGCTG 1 cut(s) 467
RseI CAYNNNNRTG 1 cut(s) 410
SacI GAGCTC 1 cut(s) 1300
SapI GCTCTTC 1 cut(s) 1305
SaqAI TTAA 3 cut(s) 231, 1154, 1512
SatI GCNGC 6 cut(s) 68, 79, 465, 993, 1095, 1143
Sau3AI GATC 6 cut(s) 130, 193, 520, 663, 928, 1366
Sau96I GGNCC 8 cut(s) 38, 84, 271, 719, 743, 1409, 1492, 1548
SchI GAGTC 2 cut(s) 637, 890
ScrFI CCNGG 5 cut(s) 16, 42, 794, 863, 1496
SduI GDGCHC 3 cut(s) 246, 1288, 1300
SexAI ACCWGGT 1 cut(s) 1494
SfaNI GCATC 7 cut(s) 326, 622, 796, 954, 979, 1019, 1358
SfcI CTRYAG 1 cut(s) 167
SinI GGWCC 4 cut(s) 719, 743, 1409, 1492
SmiMI CAYNNNNRTG 1 cut(s) 410
SmlI CTYRAG 3 cut(s) 583, 764, 1482
SmoI CTYRAG 3 cut(s) 583, 764, 1482
Sse9I AATT 9 cut(s) 393, 474, 484, 612, 798, 954, 1241, 1258, 1418
SsiI CCGC 5 cut(s) 30, 68, 78, 81, 1095
SspI AATATT 1 cut(s) 1158
SspMI CTAG 5 cut(s) 980, 1071, 1221, 1475, 1523
SstI GAGCTC 1 cut(s) 1300
StyD4I CCNGG 5 cut(s) 14, 40, 792, 861, 1494
StyI CCWWGG 2 cut(s) 87, 345
TaaI ACNGT 1 cut(s) 535
TaiI ACGT 2 cut(s) 125, 403
TaqI TCGA 2 cut(s) 1303, 1594
TasI AATT 9 cut(s) 393, 474, 484, 612, 798, 954, 1241, 1258, 1418
TauI GCSGC 3 cut(s) 70, 81, 1097
TfiI GAWTC 7 cut(s) 588, 601, 617, 725, 938, 1199, 1478
Tru1I TTAA 3 cut(s) 231, 1154, 1512
Tru9I TTAA 3 cut(s) 231, 1154, 1512
TscAI CASTG 1 cut(s) 906
TseFI GTSAC 4 cut(s) 401, 893, 901, 1627
TseI GCWGC 3 cut(s) 464, 992, 1142
Tsp45I GTSAC 4 cut(s) 401, 893, 901, 1627
TspDTI ATGAA 9 cut(s) 17, 237, 314, 477, 763, 791, 947, 975, 1431
TspGWI ACGGA 2 cut(s) 186, 613
TspRI CASTG 1 cut(s) 906
VneI GTGCAC 1 cut(s) 1284
VpaK11BI GGWCC 4 cut(s) 719, 743, 1409, 1492
XagI CCTNNNNNAGG 2 cut(s) 170, 278
XapI RAATTY 6 cut(s) 393, 474, 484, 798, 954, 1258
XceI RCATGY 2 cut(s) 209, 1544
XcmI CCANNNNNNNNNTGG 1 cut(s) 713
XmnI GAANNNNTTC 2 cut(s) 488, 621
XspI CTAG 5 cut(s) 980, 1071, 1221, 1475, 1523
Zsp2I ATGCAT 1 cut(s) 1012
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.