pycom09g06940

Conserved oligomeric Golgi complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0011987
Physical Location & Seq
Reverse (-)
5135028 .. 5138612
3585 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g06940.2

Sequence Viewer

Length: 2289 bp
ATGGCTTCTTCTTCATTTCCCGCCTCCTCCTCCGCTTCCCCACTGCAACGCCTCTCCACCTTCAAATCCTCAACCCCCACCTCCGCCATCGCCACCGCATCCCCTTTAGACACATTTGCCTCAGACCCAATCTTCTCTGTCTTCCTCTCTCCCTCCTTCTCCTCCACCACCTTCTCCTCCGCCGCCCTCTCCTCCGGCTCCCCCGCCTCTACGGCCGAAAAGCTCCAGCACGCCATCCGCCTCCTCGAGTCTCAGCTCCGCTCCGAGGTCCTCTCCCGCCACTCCGACCTCCTCGCCCAGCTCTCCTCCCTCCACCACGCCGACCACGCCCTTTCCACCGTTCGATCCTCCGTTGCCGCCCTCCAGTCCTCCCTCCGCCACACCCGGTCTGAGTTCTCCGACCCCCTCGCCTCCATCCGCACCCTCACCATCCAGCTCCAAAATCTCCACGCCTCCTCCGATCTTCTCCACCACTCCATCAGAGCCCTACGCCTCTCCAGTAAGCTCCGGTCCCTCGCCGCCGATGACCCCGACCGCCTCGATCTCGCCAAGGCTGCTCAGCTCCATTGCGAGATCTTAGCTCTTTACAACGAGTACAACCTCGCCGGCATTGATGTGGTCGATTCCGAGCTCGAGTGGGTCAAGGAGACGGGAGACAAGTTGCGTACGGAGGCGATGAAGGTTTTGGAGAGAGGGATGGAGGATTTGAACCAGGCCGAGGTTGGGACCGGTCTGCAGGTGTTTTACAATTTGGGAGAGCTGAGACGGGCGATGGATCAGCTGATTAACAAGTATAAGGGAATGGGGATGAAGAGTGTGAGTGCAGCATTGGATATGAAGGCGATTTCTGGGTCGGGAGGAGGTGGGTTTGGGCCGGGTGGGATCAGAGGAGGCGGGGGCACGCCGCAGATCGGAAGTGGTGGGAAGGCGAGGGAGGCGATTTGGCAGAGGATGGGGAGTTGTATGGATCAACTTCATTCGATAATGGTTGTGGTGTGGCACTTGCAGAGGGTGTTGTCGAAGAAGCGTGACCCGTTTACTCATGTATTGCTGCTTGATGAGGTTATTCAGGAAGCTGATCCTATGATAACAGACAGAGTGTGGGAGGCCCTTGTGAAGGCATTTGCCAACCAAATGAAGTCCGCTTTCACTGCATCAAGTTTTGTTAAAGAGGTTTTCACTATGGGGTATCCGAAGCTTTTCTCTATGATAGATATTCTTCTTGAAAGAATTGCACGCGACACAGATGTCAAAGGGGTTTTACCGGCTATTACGTCAGAGGGAAAGGAACAACTGGTTGCAGCTGTTGAAATATTCCAAAAATCATTTTTGGGACTCTGCTTGGGTCGCTTGTCAGACCTTGTGAATACTGTATTTCCAGTGTCCAGCCGTGGAAGTGTTCCCTCTAAAGAACATATCTCAATAATTATATCACGGATTCAAGAAGAAATTGAATCTGTTCAGTTGGATGGGCGCTTGACTCTTCTTGTATTGCGTGAAATTGGCAAGGTTCTTCTCCTACTTGGTGAACGAGCTGAGTACCGGATATCAACTGGTCCTGAAGCACGTCAAGTCAATGGTCCTGCAACTCCTGCACAGCTCAAGAACTTCATGTTATGTCAGTATCTCCAAGAAATTCACACACGCATATCATCTATGGTTACAGGACTGCCCACTATTGCTTCAGATGTGTTGTCTCCCTCGTTAGGTGCAATATACGGGGTTGCTAGTGACTCAGTGACGTCCTTGTTCCAAGCTATGCTTGAGCGTCTTGAATCTTGCATCTTGCAAATTCATGAACAGAGATTTGGTGTGCTAGGCATGGATGCTGCTATGGACAACAATGCTTCACCTTACATGGAGGAGTTGCAAAAGTGCATTCTTCACTTCCGTAGTGAGTTCCTGTCTAGGCTTTTGCCTCCAAAATCTGCCACGGTTGGAACAGAGACCATATGCACTAGGCTTGTTAGGAGCATGGCTGCACGGGTTTTAATATTCTTTATCAGACATGCTTCTCTTGTCAGACCCCTTTCAGAATCAGGGAAACTAAGGATGGCCAGGGACATGGCTGAGCTAGAATTAGCTGTAGGCCAAAACTTGTTCCCAGTAGAGCAACTTGGTGGGCCATACAGAGCCCTTCGAGCATTTCGACCTCTTATCTTCTTGGAGACTTCCCAACTCGGAGGATCGATCATCTTCTTCGGGATCTACCACCAAGCGTCGTACTTCACCATCTTTACTCCCGAGGTCCTGATGAATTGCAATCACCCCTGCAAAGGAACAAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
COG5

Protein Analysis

763

Amino Acids

83.35

Weight (kDa)

7.06

Isoelectric Point (pI)

45.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011987)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G67930
fragaria_vesca FvH4_6g38530
malus_domestica MD09G1149900.v1.1 MD17G1137000.v1.1
prunus_persica Prupe.3G175300_v2.0.a1 Prupe.3G175300_v2.0.a1
pyrus_communis pycom09g06940 pycom17g13060
rosa_chinensis RchiOBHm_Chr2g0151781
rosa_laevigata RLG00000020581
rosa_multiflora Rmu_co8286875.1_g000001
rosa_roxburghii Rroxscaffold_2G00096160
rosa_rugosa Rorug02G0429000
rosa_samantha Rh2AG489800 Rh2BG502400 Rh2CG476100 Rh2DG513500
rosa_wichuraiana Rw2G040160 Rw2G040270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 727
AasI GACNNNNNNGTC 1 cut(s) 1247
AatII GACGTC 1 cut(s) 1745
Acc36I ACCTGC 1 cut(s) 727
AccBSI CCGCTC 1 cut(s) 261
AccII CGCG 1 cut(s) 1239
AclWI GGATC 7 cut(s) 339, 783, 890, 975, 1073, 2194, 2213
AcoI YGGCCR 2 cut(s) 213, 2055
AcsI RAATTY 2 cut(s) 1635, 1791
AcuI CTGAAG 2 cut(s) 1581, 1668
AcyI GRCGYC 1 cut(s) 1742
AfaI GTAC 4 cut(s) 596, 667, 1541, 2225
AfiI CCNNNNNNNGG 7 cut(s) 265, 718, 723, 911, 1117, 1706, 2276
AgeI ACCGGT 1 cut(s) 728
AgsI TTSAA 7 cut(s) 64, 709, 1226, 1310, 1442, 1454, 1775
AjiI CACGTC 1 cut(s) 1568
AjnI CCWGG 2 cut(s) 711, 2057
AjuI GAANNNNNNNTTGG 2 cut(s) 1791, 1823
Alw21I GWGCWC 1 cut(s) 633
Alw26I GTCTC 7 cut(s) 255, 641, 648, 757, 1701, 1940, 2162
AlwI GGATC 7 cut(s) 339, 783, 890, 975, 1073, 2194, 2213
Ama87I CYCGRG 3 cut(s) 245, 632, 2243
AoxI GGCC 7 cut(s) 213, 714, 872, 1107, 2055, 2089, 2123
ApeKI GCWGC 6 cut(s) 554, 824, 1051, 1301, 1829, 1979
ApoI RAATTY 2 cut(s) 1635, 1791
AsiGI ACCGGT 1 cut(s) 728
Asp700I GAANNNNTTC 2 cut(s) 1199, 1458
AspLEI GCGC 1 cut(s) 1476
AspS9I GGNCC 9 cut(s) 268, 510, 726, 872, 1108, 1556, 1580, 2123, 2248
AsuC2I CCSGG 2 cut(s) 385, 876
AsuHPI GGTGA 5 cut(s) 418, 1538, 1842, 2221, 2258
AvaI CYCGRG 3 cut(s) 245, 632, 2243
AvaII GGWCC 6 cut(s) 268, 510, 726, 1556, 1580, 2248
BaeGI GKGCMC 1 cut(s) 902
BalI TGGCCA 1 cut(s) 2057
BanII GRGCYC 3 cut(s) 487, 633, 2137
BbsI GAAGAC 1 cut(s) 133
Bbv12I GWGCWC 1 cut(s) 633
BbvI GCAGC 6 cut(s) 541, 836, 1038, 1313, 1816, 1966
BceAI ACGGC 2 cut(s) 228, 1374
BciT130I CCWGG 2 cut(s) 713, 2059
BciVI GTATCC 1 cut(s) 1200
BcnI CCSGG 2 cut(s) 385, 876
BcoDI GTCTC 7 cut(s) 255, 641, 648, 757, 1701, 1940, 2162
BfaI CTAG 5 cut(s) 1728, 1817, 1908, 1959, 2075
BfmI CTRYAG 2 cut(s) 734, 2085
BfoI RGCGCY 1 cut(s) 1477
BfuAI ACCTGC 1 cut(s) 727
BfuI GTATCC 1 cut(s) 1200
BglI GCCNNNNNGGC 1 cut(s) 212
BglII AGATCT 1 cut(s) 573
BlpI GCTNAGC 2 cut(s) 558, 2070
Bme1390I CCNGG 4 cut(s) 385, 713, 876, 2059
Bme18I GGWCC 6 cut(s) 268, 510, 726, 1556, 1580, 2248
BmeT110I CYCGRG 3 cut(s) 245, 632, 2243
BmgBI CACGTC 1 cut(s) 1568
BmgT120I GGNCC 9 cut(s) 268, 510, 726, 872, 1108, 1556, 1580, 2123, 2248
BmiI GGNNCC 3 cut(s) 199, 512, 727
BmrFI CCNGG 4 cut(s) 385, 713, 876, 2059
BmrI ACTGGG 1 cut(s) 2099
BmsI GCATC 4 cut(s) 107, 1163, 1791, 1816
BmuI ACTGGG 1 cut(s) 2099
BpiI GAAGAC 1 cut(s) 133
BplI GAGNNNNNCTC 2 cut(s) 257, 289
BpmI CTGGAG 3 cut(s) 209, 347, 481
Bpu1102I GCTNAGC 2 cut(s) 558, 2070
BpuEI CTTGAG 2 cut(s) 1586, 1784
BpuMI CCSGG 2 cut(s) 385, 876
Bsa29I ATCGAT 1 cut(s) 2189
BsaHI GRCGYC 1 cut(s) 1742
BsaI GGTCTC 1 cut(s) 1940
BsaJI CCNNGG 7 cut(s) 264, 549, 717, 1390, 1932, 2058, 2244
BsaWI WCCGGW 3 cut(s) 507, 728, 1542
BsaXI ACNNNNNCTCC 2 cut(s) 440, 470
Bsc4I CCNNNNNNNGG 7 cut(s) 265, 718, 723, 911, 1117, 1706, 2276
Bse118I RCCGGY 3 cut(s) 605, 728, 1264
Bse1I ACTGG 6 cut(s) 364, 498, 1299, 1379, 1558, 2105
Bse3DI GCAATG 1 cut(s) 565
BseBI CCWGG 2 cut(s) 713, 2059
BseCI ATCGAT 1 cut(s) 2189
BseDI CCNNGG 7 cut(s) 264, 549, 717, 1390, 1932, 2058, 2244
BseLI CCNNNNNNNGG 7 cut(s) 265, 718, 723, 911, 1117, 1706, 2276
BseMI GCAATG 1 cut(s) 565
BseMII CTCAG 8 cut(s) 135, 266, 381, 572, 752, 1527, 1749, 2061
BseNI ACTGG 6 cut(s) 364, 498, 1299, 1379, 1558, 2105
BseSI GKGCMC 1 cut(s) 902
BseX3I CGGCCG 1 cut(s) 213
BseXI GCAGC 6 cut(s) 541, 836, 1038, 1313, 1816, 1966
BseYI CCCAGC 1 cut(s) 297
BsgI GTGCAG 3 cut(s) 843, 1578, 1965
Bsh1236I CGCG 1 cut(s) 1239
Bsh1285I CGRYCG 2 cut(s) 216, 535
BshFI GGCC 7 cut(s) 215, 716, 874, 1109, 2057, 2091, 2125
BshTI ACCGGT 1 cut(s) 728
BshVI ATCGAT 1 cut(s) 2189
BsiEI CGRYCG 2 cut(s) 216, 535
BsiHKAI GWGCWC 1 cut(s) 633
BsiHKCI CYCGRG 3 cut(s) 245, 632, 2243
BsiSI CCGG 8 cut(s) 195, 385, 508, 606, 729, 875, 1265, 1543
BsiWI CGTACG 1 cut(s) 665
BslFI GGGAC 4 cut(s) 496, 739, 1347, 2075
BslI CCNNNNNNNGG 7 cut(s) 265, 718, 723, 911, 1117, 1706, 2276
BsmAI GTCTC 7 cut(s) 255, 641, 648, 757, 1701, 1940, 2162
BsmBI CGTCTC 2 cut(s) 641, 757
BsmFI GGGAC 4 cut(s) 496, 739, 1347, 2075
BsmI GAATGC 1 cut(s) 1878
BsnI GGCC 7 cut(s) 215, 716, 874, 1109, 2057, 2091, 2125
Bso31I GGTCTC 1 cut(s) 1940
BsoBI CYCGRG 3 cut(s) 245, 632, 2243
Bsp1286I GDGCHC 4 cut(s) 487, 633, 902, 2137
Bsp1720I GCTNAGC 2 cut(s) 558, 2070
BspANI GGCC 7 cut(s) 215, 716, 874, 1109, 2057, 2091, 2125
BspCNI CTCAG 8 cut(s) 134, 265, 382, 571, 753, 1528, 1748, 2062
BspDI ATCGAT 1 cut(s) 2189
BspFNI CGCG 1 cut(s) 1239
BspHI TCATGA 1 cut(s) 1795
BspLI GGNNCC 3 cut(s) 199, 512, 727
BspMAI CTGCAG 1 cut(s) 738
BspMI ACCTGC 1 cut(s) 727
BspPI GGATC 7 cut(s) 339, 783, 890, 975, 1073, 2194, 2213
BspTNI GGTCTC 1 cut(s) 1940
BsrBI CCGCTC 1 cut(s) 261
BsrDI GCAATG 1 cut(s) 565
BsrFI RCCGGY 3 cut(s) 605, 728, 1264
BsrI ACTGG 6 cut(s) 364, 498, 1299, 1379, 1558, 2105
BssAI RCCGGY 3 cut(s) 605, 728, 1264
BssECI CCNNGG 7 cut(s) 264, 549, 717, 1390, 1932, 2058, 2244
BssNI GRCGYC 1 cut(s) 1742
BssT1I CCWWGG 1 cut(s) 549
Bst2UI CCWGG 2 cut(s) 713, 2059
Bst4CI ACNGT 3 cut(s) 340, 1372, 1936
Bst6I CTCTTC 2 cut(s) 806, 1488
BstACI GRCGYC 1 cut(s) 1742
BstAPI GCANNNNNTGC 1 cut(s) 1592
BstC8I GCNNGC 4 cut(s) 231, 607, 902, 1237
BstDSI CCRYGG 2 cut(s) 1390, 1932
BstENI CCTNNNNNAGG 1 cut(s) 1115
BstFNI CGCG 1 cut(s) 1239
BstH2I RGCGCY 1 cut(s) 1477
BstHHI GCGC 1 cut(s) 1476
BstMAI GTCTC 7 cut(s) 255, 641, 648, 757, 1701, 1940, 2162
BstMCI CGRYCG 2 cut(s) 216, 535
BstMWI GCNNNNNNNGC 8 cut(s) 212, 326, 554, 935, 1151, 1347, 1592, 2141
BstNI CCWGG 2 cut(s) 713, 2059
BstNSI RCATGY 1 cut(s) 2012
BstSCI CCNGG 4 cut(s) 383, 711, 874, 2057
BstSFI CTRYAG 2 cut(s) 734, 2085
BstSLI GKGCMC 1 cut(s) 902
BstUI CGCG 1 cut(s) 1239
BstV1I GCAGC 6 cut(s) 541, 836, 1038, 1313, 1816, 1966
BstV2I GAAGAC 1 cut(s) 133
BstX2I RGATCY 2 cut(s) 573, 2205
BstXI CCANNNNNNTGG 1 cut(s) 2065
BstYI RGATCY 2 cut(s) 573, 2205
BstZI CGGCCG 1 cut(s) 213
Bsu15I ATCGAT 1 cut(s) 2189
BsuI GTATCC 1 cut(s) 1200
BsuRI GGCC 7 cut(s) 215, 716, 874, 1109, 2057, 2091, 2125
BsuTUI ATCGAT 1 cut(s) 2189
BtgI CCRYGG 2 cut(s) 1390, 1932
BtgZI GCGATG 3 cut(s) 73, 689, 785
BtrI CACGTC 1 cut(s) 1568
BtsI GCAGTG 2 cut(s) 41, 1149
BtsIMutI CAGTG 4 cut(s) 41, 1149, 1386, 1743
BveI ACCTGC 1 cut(s) 727
Cac8I GCNNGC 4 cut(s) 231, 607, 902, 1237
CciI TCATGA 1 cut(s) 1795
CfoI GCGC 1 cut(s) 1476
Cfr10I RCCGGY 3 cut(s) 605, 728, 1264
Cfr13I GGNCC 9 cut(s) 268, 510, 726, 872, 1108, 1556, 1580, 2123, 2248
ClaI ATCGAT 1 cut(s) 2189
CseI GACGC 2 cut(s) 1757, 2208
Csp6I GTAC 4 cut(s) 595, 666, 1540, 2224
CspAI ACCGGT 1 cut(s) 728
CviAII CATG 8 cut(s) 1043, 1612, 1796, 1822, 1858, 1975, 2009, 2065
CviQI GTAC 4 cut(s) 595, 666, 1540, 2224
DrdI GACNNNNNNGTC 1 cut(s) 1247
DseDI GACNNNNNNGTC 1 cut(s) 1247
EaeI YGGCCR 2 cut(s) 213, 2055
EagI CGGCCG 1 cut(s) 213
Eam1104I CTCTTC 2 cut(s) 806, 1488
EarI CTCTTC 2 cut(s) 806, 1488
EciI GGCGGA 4 cut(s) 73, 169, 227, 365
Ecl136II GAGCTC 1 cut(s) 631
EclXI CGGCCG 1 cut(s) 213
Eco130I CCWWGG 1 cut(s) 549
Eco24I GRGCYC 3 cut(s) 487, 633, 2137
Eco31I GGTCTC 1 cut(s) 1940
Eco32I GATATC 1 cut(s) 1548
Eco47I GGWCC 6 cut(s) 268, 510, 726, 1556, 1580, 2248
Eco52I CGGCCG 1 cut(s) 213
Eco53kI GAGCTC 1 cut(s) 631
Eco57I CTGAAG 2 cut(s) 1581, 1668
Eco88I CYCGRG 3 cut(s) 245, 632, 2243
EcoICRI GAGCTC 1 cut(s) 631
EcoNI CCTNNNNNAGG 1 cut(s) 1115
EcoO109I RGGNCCY 3 cut(s) 268, 1108, 2248
EcoRII CCWGG 2 cut(s) 711, 2057
EcoRV GATATC 1 cut(s) 1548
EcoT14I CCWWGG 1 cut(s) 549
EcoT38I GRGCYC 3 cut(s) 487, 633, 2137
ErhI CCWWGG 1 cut(s) 549
Esp3I CGTCTC 2 cut(s) 641, 757
FaeI CATG 8 cut(s) 1046, 1615, 1799, 1825, 1861, 1978, 2012, 2068
FalI AAGNNNNNCTT 2 cut(s) 1746, 1778
FaqI GGGAC 4 cut(s) 496, 739, 1347, 2075
FatI CATG 8 cut(s) 1042, 1611, 1795, 1821, 1857, 1974, 2008, 2064
FauI CCCGC 4 cut(s) 28, 211, 284, 887
FauNDI CATATG 1 cut(s) 1952
FriOI GRGCYC 3 cut(s) 487, 633, 2137
FspBI CTAG 5 cut(s) 1728, 1817, 1908, 1959, 2075
GlaI GCGC 1 cut(s) 1475
GsaI CCCAGC 1 cut(s) 301
GsuI CTGGAG 3 cut(s) 209, 347, 481
HaeII RGCGCY 1 cut(s) 1477
HaeIII GGCC 7 cut(s) 215, 716, 874, 1109, 2057, 2091, 2125
HapII CCGG 8 cut(s) 195, 385, 508, 606, 729, 875, 1265, 1543
HgaI GACGC 2 cut(s) 1757, 2208
HhaI GCGC 1 cut(s) 1476
Hin1I GRCGYC 1 cut(s) 1742
Hin1II CATG 8 cut(s) 1046, 1615, 1799, 1825, 1861, 1978, 2012, 2068
Hin6I GCGC 1 cut(s) 1474
HinP1I GCGC 1 cut(s) 1474
HindIII AAGCTT 1 cut(s) 1196
HinfI GANTC 9 cut(s) 248, 623, 1335, 1438, 1454, 1480, 1733, 1775, 2036
HpaII CCGG 8 cut(s) 195, 385, 508, 606, 729, 875, 1265, 1543
HphI GGTGA 5 cut(s) 418, 1538, 1842, 2221, 2258
Hpy166II GTNNAC 2 cut(s) 1038, 1529
Hpy8I GTNNAC 2 cut(s) 1038, 1529
Hpy99I CGWCG 1 cut(s) 2224
HpyAV CCTTC 8 cut(s) 70, 166, 181, 673, 832, 919, 1111, 2147
HpyCH4III ACNGT 3 cut(s) 340, 1372, 1936
HpyCH4IV ACGT 3 cut(s) 1274, 1567, 1742
HpyF10VI GCNNNNNNNGC 8 cut(s) 212, 326, 554, 935, 1151, 1347, 1592, 2141
HpySE526I ACGT 3 cut(s) 1274, 1567, 1742
Hsp92I GRCGYC 1 cut(s) 1742
Hsp92II CATG 8 cut(s) 1046, 1615, 1799, 1825, 1861, 1978, 2012, 2068
HspAI GCGC 1 cut(s) 1474
KroI GCCGGC 1 cut(s) 605
KroNI GCCGGC 1 cut(s) 607
LmnI GCTCC 8 cut(s) 203, 228, 261, 266, 441, 510, 567, 1971
Lsp1109I GCAGC 6 cut(s) 541, 836, 1038, 1313, 1816, 1966
LweI GCATC 4 cut(s) 107, 1163, 1791, 1816
MaeI CTAG 5 cut(s) 1728, 1817, 1908, 1959, 2075
MaeII ACGT 3 cut(s) 1274, 1567, 1742
MaeIII GTNAC 4 cut(s) 1028, 1660, 1730, 1738
MbiI CCGCTC 1 cut(s) 261
MflI RGATCY 2 cut(s) 573, 2205
MhlI GDGCHC 4 cut(s) 487, 633, 902, 2137
MlsI TGGCCA 1 cut(s) 2057
MluCI AATT 9 cut(s) 748, 1230, 1425, 1449, 1500, 1635, 1791, 2078, 2257
MluNI TGGCCA 1 cut(s) 2057
MlyI GAGTC 4 cut(s) 257, 1329, 1474, 1727
MmeI TCCRAC 4 cut(s) 309, 423, 1446, 1918
Mox20I TGGCCA 1 cut(s) 2057
MroNI GCCGGC 1 cut(s) 605
MroXI GAANNNNTTC 2 cut(s) 1199, 1458
MscI TGGCCA 1 cut(s) 2057
MseI TTAA 3 cut(s) 786, 1167, 1991
MslI CAYNNNNRTG 1 cut(s) 614
Msp20I TGGCCA 1 cut(s) 2057
MspA1I CMGCKG 2 cut(s) 781, 1304
MspI CCGG 8 cut(s) 195, 385, 508, 606, 729, 875, 1265, 1543
MspR9I CCNGG 4 cut(s) 385, 713, 876, 2059
Mva1269I GAATGC 1 cut(s) 1878
MvaI CCWGG 2 cut(s) 713, 2059
MvnI CGCG 1 cut(s) 1239
MwoI GCNNNNNNNGC 8 cut(s) 212, 326, 554, 935, 1151, 1347, 1592, 2141
NaeI GCCGGC 1 cut(s) 607
NciI CCSGG 2 cut(s) 385, 876
NdeI CATATG 1 cut(s) 1952
NgoMIV GCCGGC 1 cut(s) 605
NlaIII CATG 8 cut(s) 1046, 1615, 1799, 1825, 1861, 1978, 2012, 2068
NlaIV GGNNCC 3 cut(s) 199, 512, 727
NmeAIII GCCGAG 1 cut(s) 742
NmuCI GTSAC 3 cut(s) 1028, 1730, 1738
NspI RCATGY 1 cut(s) 2012
PaeR7I CTCGAG 2 cut(s) 245, 632
PagI TCATGA 1 cut(s) 1795
PaqCI CACCTGC 1 cut(s) 727
PcsI WCGNNNNNNNCGW 2 cut(s) 456, 2146
PctI GAATGC 1 cut(s) 1878
PdiI GCCGGC 1 cut(s) 607
PdmI GAANNNNTTC 2 cut(s) 1199, 1458
PfeI GAWTC 5 cut(s) 623, 1438, 1454, 1775, 2036
Pfl23II CGTACG 1 cut(s) 665
PinAI ACCGGT 1 cut(s) 728
PleI GAGTC 4 cut(s) 256, 1329, 1474, 1727
PpsI GAGTC 4 cut(s) 256, 1329, 1474, 1727
PpuMI RGGWCCY 2 cut(s) 268, 2248
Psp124BI GAGCTC 1 cut(s) 633
Psp5II RGGWCCY 2 cut(s) 268, 2248
Psp6I CCWGG 2 cut(s) 711, 2057
PspFI CCCAGC 1 cut(s) 297
PspGI CCWGG 2 cut(s) 711, 2057
PspLI CGTACG 1 cut(s) 665
PspN4I GGNNCC 3 cut(s) 199, 512, 727
PspPI GGNCC 9 cut(s) 268, 510, 726, 872, 1108, 1556, 1580, 2123, 2248
PspPPI RGGWCCY 2 cut(s) 268, 2248
PspXI VCTCGAGB 2 cut(s) 245, 632
PstI CTGCAG 1 cut(s) 738
PsuI RGATCY 2 cut(s) 573, 2205
PvuII CAGCTG 2 cut(s) 781, 1304
RsaI GTAC 4 cut(s) 596, 667, 1541, 2225
RsaNI GTAC 4 cut(s) 595, 666, 1540, 2224
RseI CAYNNNNRTG 1 cut(s) 614
SacI GAGCTC 1 cut(s) 633
SaqAI TTAA 3 cut(s) 786, 1167, 1991
Sau96I GGNCC 9 cut(s) 268, 510, 726, 872, 1108, 1556, 1580, 2123, 2248
SchI GAGTC 4 cut(s) 257, 1329, 1474, 1727
ScrFI CCNGG 4 cut(s) 385, 713, 876, 2059
SduI GDGCHC 4 cut(s) 487, 633, 902, 2137
SfaNI GCATC 4 cut(s) 107, 1163, 1791, 1816
SfcI CTRYAG 2 cut(s) 734, 2085
Sfr274I CTCGAG 2 cut(s) 245, 632
SinI GGWCC 6 cut(s) 268, 510, 726, 1556, 1580, 2248
SlaI CTCGAG 2 cut(s) 245, 632
SmiMI CAYNNNNRTG 1 cut(s) 614
SmlI CTYRAG 4 cut(s) 245, 632, 1601, 1763
SmoI CTYRAG 4 cut(s) 245, 632, 1601, 1763
Sse9I AATT 9 cut(s) 748, 1230, 1425, 1449, 1500, 1635, 1791, 2078, 2257
SspI AATATT 2 cut(s) 1314, 1995
SspMI CTAG 5 cut(s) 1728, 1817, 1908, 1959, 2075
SstI GAGCTC 1 cut(s) 633
StyD4I CCNGG 4 cut(s) 383, 711, 874, 2057
StyI CCWWGG 1 cut(s) 549
TaaI ACNGT 3 cut(s) 340, 1372, 1936
TaiI ACGT 3 cut(s) 1277, 1570, 1745
TasI AATT 9 cut(s) 748, 1230, 1425, 1449, 1500, 1635, 1791, 2078, 2257
TatI WGTACW 1 cut(s) 594
TauI GCSGC 4 cut(s) 185, 359, 521, 907
TfiI GAWTC 5 cut(s) 623, 1438, 1454, 1775, 2036
Tru1I TTAA 3 cut(s) 786, 1167, 1991
Tru9I TTAA 3 cut(s) 786, 1167, 1991
TscAI CASTG 4 cut(s) 48, 1156, 1386, 1743
TseFI GTSAC 3 cut(s) 1028, 1730, 1738
TseI GCWGC 6 cut(s) 554, 824, 1051, 1301, 1829, 1979
Tsp45I GTSAC 3 cut(s) 1028, 1730, 1738
TspDTI ATGAA 9 cut(s) 692, 824, 851, 965, 1151, 1600, 1784, 1812, 2270
TspGWI ACGGA 4 cut(s) 340, 683, 1450, 1880
TspRI CASTG 4 cut(s) 48, 1156, 1386, 1743
VpaK11BI GGWCC 6 cut(s) 268, 510, 726, 1556, 1580, 2248
XagI CCTNNNNNAGG 1 cut(s) 1115
XapI RAATTY 2 cut(s) 1635, 1791
XceI RCATGY 1 cut(s) 2012
XcmI CCANNNNNNNNNTGG 1 cut(s) 719
XhoI CTCGAG 2 cut(s) 245, 632
XmnI GAANNNNTTC 2 cut(s) 1199, 1458
XspI CTAG 5 cut(s) 1728, 1817, 1908, 1959, 2075
ZraI GACGTC 1 cut(s) 1743
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.