Prupe.3G188100_v2.0.a1

UPF0586 protein C9orf41 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0012063
Physical Location & Seq
Reverse (-)
20157757 .. 20163194
5438 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G188100.1

Sequence Viewer

Length: 1506 bp
ATGTCGTCTGTCAGAGCTGCAGAGAGAGAAATGCATCGAGGAGAGGACGAAGACGACGAACGACGTCGTCAGAGGAAGCTAGAAGAAGCCCTCGAAGTCAAATCGCTCAGGCGCATCATCAGCGCCTATCTCAACTACCCGGAGGCAGCAGAAGAGGACGTGAGAAGATATGAAAGATCTTTTAAAATACTTCCACCCTCCCATAAGGCTTTACTGTCCCACTACCCTTTAAAGTTTCAAAGACTAAGACGGTGCATTTCAGTAAATTCATATTTCATTTTTAGCATGCTTCAGGCATTTGAACCCCCGCTTGATTTGAGCCAGGACATGGATGTCCGTGATGGCCCACATCTTGAACGCGTCTCATATAACCATGATGTTTCTGGAGTAAAAAGTGTTTCCTCTTCTCAGTCTAACTCCACAAGTGAAAGAATGCATATCTCCAACTCAGATCAGGCCTGTTGTGGGGAAGGGAGCAGTGCAGTCTGCAGTACACCAATAGGGGTGACTACCAAAAAGGAGGTAAACAATGAAGGTCATTGTGATTGCATCACTGAGCGACACACTTCAGGCAGGGAATATAACAGAGAGATGCATAACTGTGATGGGAATGATGCCATTGATTCCAATGGAGATGTGTCCTCGCCAACTCGTACGTGGTTGGATCCATCATTACAATTACATGTTCCATTAGTTGATGTTGATAAGGTTCGTTGTATTGTACGAAACATAGTTAGAGACTGGGCGGCAGAGGGACAGAAAGAACGCGACCAGTGCTACAAGCCTATACTTGAAGAACTTGATTCACTATTTGCTGATCGCTCTAAGGAAAGTCCTCCTGCCTGTTTAGTTCCTGGTGCTGGACTTGGGCGACTGGCTTTGGAAATTTCATGTCTAGGTTTCATAAGCCAGGGAAATGAATTTTCATACTACATGATGATATGTTCAAGTTTTATTCTCAATCATTCTCGAACTGCTGGGGAATGGACAATATACCCTTGGATCCACAGCAATTGCAATTCACTTTCAGATAGTGACCAACTTCGTCCCGTTTCAGTACCGGATATTCATCCAGCAAGTGCAGGGATTACTGAAGGCTTTTCTATGTGTGGTGGTGACTTTGTTGAGGTTTATAATGATCCAAACCAAGTAGGTGTTTGGGATGCAGTTGTGACCTGCTTCTTTATTGACACGGCGCACAACATTGTCGAATACATTGAAATCATATCAAGAATCTTGAAAGATGGTGGAGTTTGGATAAATATGGGCCCACTACTATATCACTTTGCTGAGATGTATGGGCAAGATGATGAAATGTCCATTGAACTGAGTTTGGAGGATGTGAAGAGGGTTGCTTTGCACTATGGATTTCATTTTGAGAAGGAAAGGACCATTGAGACAACCTACACTACAAATCCTAAGTCAATGATGCAAAACCGATACAATGCTGCATTTTGGACAATGAGAAAGAGATCAGCAATAGCAACGGAGCAAGCCACTCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00340 map00340
Pfam Domains
Protein Families
N2227

Protein Analysis

502

Amino Acids

56.86

Weight (kDa)

5.29

Isoelectric Point (pI)

56.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012063)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G32170 AT2G32170
fragaria_vesca FvH4_6g39770 FvH4_6g39770
malus_domestica MD09G1136900.v1.1 MD17G1127100.v1.1
prunus_persica Prupe.3G188100_v2.0.a1
pyrus_communis pycom09g05780 pycom17g11940
rosa_chinensis RchiOBHm_Chr2g0153881
rosa_laevigata RLG00000020736
rosa_multiflora Rmu_sc0003887.1_g000010
rosa_roxburghii Rroxscaffold_2G00094680
rosa_rugosa Rorug02G0443000
rosa_samantha Rh2AG506700 Rh2BG516700 Rh2CG492400 Rh2DG528800
rosa_wichuraiana Rw2G041590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1134
AasI GACNNNNNNGTC 1 cut(s) 332
AatII GACGTC 1 cut(s) 67
Acc36I ACCTGC 1 cut(s) 1184
AccB7I CCANNNNNTGG 1 cut(s) 328
AccII CGCG 2 cut(s) 360, 768
AciI CCGC 2 cut(s) 308, 746
AclWI GGATC 5 cut(s) 659, 672, 997, 1010, 1133
AcsI RAATTY 3 cut(s) 265, 885, 920
AcuI CTGAAG 3 cut(s) 275, 552, 1113
AcyI GRCGYC 1 cut(s) 64
AfaI GTAC 4 cut(s) 493, 655, 723, 1059
AfiI CCNNNNNNNGG 3 cut(s) 328, 465, 860
AflIII ACRYGT 2 cut(s) 358, 682
AgsI TTSAA 8 cut(s) 239, 302, 356, 794, 948, 1220, 1240, 1325
AjiI CACGTC 1 cut(s) 160
AjnI CCWGG 3 cut(s) 321, 853, 909
AluBI AGCT 2 cut(s) 17, 79
AluI AGCT 2 cut(s) 17, 79
Alw26I GTCTC 3 cut(s) 367, 732, 1391
AlwI GGATC 5 cut(s) 659, 672, 997, 1010, 1133
AoxI GGCC 3 cut(s) 343, 456, 1267
ApaI GGGCCC 1 cut(s) 1271
ApeKI GCWGC 3 cut(s) 17, 146, 1448
ApoI RAATTY 3 cut(s) 265, 885, 920
ArsI GACNNNNNNTTYG 2 cut(s) 1406, 1438
AspLEI GCGC 3 cut(s) 114, 125, 1198
AspS9I GGNCC 4 cut(s) 344, 1267, 1268, 1389
AsuC2I CCSGG 1 cut(s) 140
AsuHPI GGTGA 2 cut(s) 517, 1127
AvaII GGWCC 1 cut(s) 1389
BaeGI GKGCMC 1 cut(s) 1271
BamHI GGATCC 2 cut(s) 664, 1002
BanII GRGCYC 1 cut(s) 1271
BbsI GAAGAC 1 cut(s) 57
BbvI GCAGC 3 cut(s) 4, 158, 1435
BccI CCATC 4 cut(s) 335, 599, 676, 1238
BceAI ACGGC 1 cut(s) 1209
BciT130I CCWGG 3 cut(s) 323, 855, 911
BcnI CCSGG 1 cut(s) 140
BcoDI GTCTC 3 cut(s) 367, 732, 1391
BfaI CTAG 2 cut(s) 80, 896
BfmI CTRYAG 2 cut(s) 18, 487
BfoI RGCGCY 1 cut(s) 126
BfuAI ACCTGC 1 cut(s) 1184
BglII AGATCT 1 cut(s) 176
BisI GCNGC 4 cut(s) 18, 147, 747, 1449
BlsI GCNGC 4 cut(s) 19, 148, 748, 1450
Bme1390I CCNGG 4 cut(s) 140, 323, 855, 911
Bme18I GGWCC 1 cut(s) 1389
BmgBI CACGTC 1 cut(s) 160
BmgT120I GGNCC 4 cut(s) 344, 1267, 1268, 1389
BmiI GGNNCC 3 cut(s) 666, 1004, 1269
BmrFI CCNGG 4 cut(s) 140, 323, 855, 911
BmrI ACTGGG 1 cut(s) 751
BmsI GCATC 7 cut(s) 43, 123, 558, 582, 604, 1153, 1419
BmuI ACTGGG 1 cut(s) 751
BpiI GAAGAC 1 cut(s) 57
BpmI CTGGAG 1 cut(s) 405
Bpu10I CCTNAGC 1 cut(s) 107
BpuMI CCSGG 1 cut(s) 140
BsaAI YACGTR 1 cut(s) 657
BsaBI GATNNNNATC 1 cut(s) 1068
BsaHI GRCGYC 1 cut(s) 64
BsaJI CCNNGG 2 cut(s) 910, 998
BsaWI WCCGGW 1 cut(s) 1060
Bsc4I CCNNNNNNNGG 3 cut(s) 328, 465, 860
Bse1I ACTGG 3 cut(s) 746, 772, 879
Bse8I GATNNNNATC 1 cut(s) 1068
BseBI CCWGG 3 cut(s) 323, 855, 911
BseDI CCNNGG 2 cut(s) 910, 998
BseGI GGATG 4 cut(s) 337, 1069, 1168, 1345
BseJI GATNNNNATC 1 cut(s) 1068
BseLI CCNNNNNNNGG 3 cut(s) 328, 465, 860
BseMII CTCAG 6 cut(s) 121, 422, 462, 546, 1281, 1319
BseNI ACTGG 3 cut(s) 746, 772, 879
BseRI GAGGAG 1 cut(s) 54
BseSI GKGCMC 1 cut(s) 1271
BseXI GCAGC 3 cut(s) 4, 158, 1435
BseYI CCCAGC 1 cut(s) 977
BsgI GTGCAG 2 cut(s) 501, 1101
Bsh1236I CGCG 2 cut(s) 360, 768
BshFI GGCC 3 cut(s) 345, 458, 1269
BsiSI CCGG 2 cut(s) 140, 1061
BsiWI CGTACG 1 cut(s) 653
BslFI GGGAC 3 cut(s) 202, 768, 1032
BslI CCNNNNNNNGG 3 cut(s) 328, 465, 860
BsmAI GTCTC 3 cut(s) 367, 732, 1391
BsmBI CGTCTC 1 cut(s) 367
BsmFI GGGAC 3 cut(s) 202, 768, 1032
BsmI GAATGC 1 cut(s) 438
BsnI GGCC 3 cut(s) 345, 458, 1269
Bsp120I GGGCCC 1 cut(s) 1267
Bsp1286I GDGCHC 1 cut(s) 1271
Bsp143I GATC 7 cut(s) 176, 451, 664, 817, 1002, 1138, 1472
BspACI CCGC 2 cut(s) 308, 746
BspANI GGCC 3 cut(s) 345, 458, 1269
BspCNI CTCAG 6 cut(s) 120, 421, 461, 547, 1282, 1320
BspFNI CGCG 2 cut(s) 360, 768
BspLI GGNNCC 3 cut(s) 666, 1004, 1269
BspMAI CTGCAG 2 cut(s) 22, 491
BspMI ACCTGC 1 cut(s) 1184
BspPI GGATC 5 cut(s) 659, 672, 997, 1010, 1133
BsrI ACTGG 3 cut(s) 746, 772, 879
BssECI CCNNGG 2 cut(s) 910, 998
BssMI GATC 7 cut(s) 176, 451, 664, 817, 1002, 1138, 1472
BssNI GRCGYC 1 cut(s) 64
BssT1I CCWWGG 1 cut(s) 998
Bst2UI CCWGG 3 cut(s) 323, 855, 911
Bst4CI ACNGT 3 cut(s) 216, 252, 602
Bst6I CTCTTC 3 cut(s) 147, 409, 1340
BstACI GRCGYC 1 cut(s) 64
BstBAI YACGTR 1 cut(s) 657
BstC8I GCNNGC 2 cut(s) 287, 1494
BstDEI CTNAG 9 cut(s) 107, 245, 408, 448, 555, 825, 1290, 1328, 1419
BstF5I GGATG 4 cut(s) 337, 1069, 1168, 1345
BstFNI CGCG 2 cut(s) 360, 768
BstH2I RGCGCY 1 cut(s) 126
BstHHI GCGC 3 cut(s) 114, 125, 1198
BstKTI GATC 7 cut(s) 179, 454, 667, 820, 1005, 1141, 1475
BstMAI GTCTC 3 cut(s) 367, 732, 1391
BstMBI GATC 7 cut(s) 176, 451, 664, 817, 1002, 1138, 1472
BstMWI GCNNNNNNNGC 2 cut(s) 120, 774
BstNI CCWGG 3 cut(s) 323, 855, 911
BstNSI RCATGY 2 cut(s) 289, 686
BstSCI CCNGG 4 cut(s) 138, 321, 853, 909
BstSFI CTRYAG 2 cut(s) 18, 487
BstSLI GKGCMC 1 cut(s) 1271
BstUI CGCG 2 cut(s) 360, 768
BstV1I GCAGC 3 cut(s) 4, 158, 1435
BstV2I GAAGAC 1 cut(s) 57
BstX2I RGATCY 3 cut(s) 176, 664, 1002
BstYI RGATCY 3 cut(s) 176, 664, 1002
BsuRI GGCC 3 cut(s) 345, 458, 1269
BtrI CACGTC 1 cut(s) 160
BtsCI GGATG 4 cut(s) 337, 1069, 1168, 1345
BtsI GCAGTG 1 cut(s) 484
BtsIMutI CAGTG 3 cut(s) 484, 552, 779
BveI ACCTGC 1 cut(s) 1184
Cac8I GCNNGC 2 cut(s) 287, 1494
CfoI GCGC 3 cut(s) 114, 125, 1198
Cfr13I GGNCC 4 cut(s) 344, 1267, 1268, 1389
CseI GACGC 1 cut(s) 349
Csp6I GTAC 4 cut(s) 492, 654, 722, 1058
CspCI CAANNNNNGTGG 2 cut(s) 995, 1030
CviAII CATG 6 cut(s) 286, 328, 374, 683, 891, 934
CviQI GTAC 4 cut(s) 492, 654, 722, 1058
DdeI CTNAG 9 cut(s) 107, 245, 408, 448, 555, 825, 1290, 1328, 1419
DpnI GATC 7 cut(s) 178, 453, 666, 819, 1004, 1140, 1474
DpnII GATC 7 cut(s) 176, 451, 664, 817, 1002, 1138, 1472
DraI TTTAAA 2 cut(s) 184, 231
DrdI GACNNNNNNGTC 1 cut(s) 332
DseDI GACNNNNNNGTC 1 cut(s) 332
Eam1104I CTCTTC 3 cut(s) 147, 409, 1340
EarI CTCTTC 3 cut(s) 147, 409, 1340
Eco130I CCWWGG 1 cut(s) 998
Eco147I AGGCCT 1 cut(s) 458
Eco24I GRGCYC 1 cut(s) 1271
Eco47I GGWCC 1 cut(s) 1389
Eco57I CTGAAG 3 cut(s) 275, 552, 1113
EcoRII CCWGG 3 cut(s) 321, 853, 909
EcoT14I CCWWGG 1 cut(s) 998
EcoT22I ATGCAT 3 cut(s) 36, 438, 597
EcoT38I GRGCYC 1 cut(s) 1271
ErhI CCWWGG 1 cut(s) 998
Esp3I CGTCTC 1 cut(s) 367
FaeI CATG 6 cut(s) 289, 331, 377, 686, 894, 937
FaqI GGGAC 3 cut(s) 202, 768, 1032
FatI CATG 6 cut(s) 285, 327, 373, 682, 890, 933
FauI CCCGC 1 cut(s) 315
Fnu4HI GCNGC 4 cut(s) 18, 147, 747, 1449
FokI GGATG 4 cut(s) 344, 1056, 1175, 1352
FriOI GRGCYC 1 cut(s) 1271
Fsp4HI GCNGC 4 cut(s) 18, 147, 747, 1449
FspBI CTAG 2 cut(s) 80, 896
GlaI GCGC 3 cut(s) 113, 124, 1197
GluI GCNGC 4 cut(s) 18, 147, 747, 1449
GsaI CCCAGC 1 cut(s) 981
GsuI CTGGAG 1 cut(s) 405
HaeII RGCGCY 1 cut(s) 126
HaeIII GGCC 3 cut(s) 345, 458, 1269
HapII CCGG 2 cut(s) 140, 1061
HgaI GACGC 1 cut(s) 349
HhaI GCGC 3 cut(s) 114, 125, 1198
Hin1I GRCGYC 1 cut(s) 64
Hin1II CATG 6 cut(s) 289, 331, 377, 686, 894, 937
Hin6I GCGC 3 cut(s) 112, 123, 1196
HinP1I GCGC 3 cut(s) 112, 123, 1196
HinfI GANTC 3 cut(s) 623, 803, 1233
HpaII CCGG 2 cut(s) 140, 1061
HphI GGTGA 2 cut(s) 517, 1127
Hpy166II GTNNAC 2 cut(s) 494, 526
Hpy188I TCNGA 4 cut(s) 14, 72, 451, 1030
Hpy188III TCNNGA 5 cut(s) 353, 384, 969, 1230, 1237
Hpy8I GTNNAC 2 cut(s) 494, 526
Hpy99I CGWCG 3 cut(s) 59, 66, 69
HpyAV CCTTC 4 cut(s) 464, 527, 1088, 1375
HpyCH4III ACNGT 3 cut(s) 216, 252, 602
HpyCH4IV ACGT 3 cut(s) 64, 159, 656
HpyF10VI GCNNNNNNNGC 2 cut(s) 120, 774
HpyF3I CTNAG 9 cut(s) 107, 245, 408, 448, 555, 825, 1290, 1328, 1419
HpySE526I ACGT 3 cut(s) 64, 159, 656
Hsp92I GRCGYC 1 cut(s) 64
Hsp92II CATG 6 cut(s) 289, 331, 377, 686, 894, 937
HspAI GCGC 3 cut(s) 112, 123, 1196
Kzo9I GATC 7 cut(s) 176, 451, 664, 817, 1002, 1138, 1472
LmnI GCTCC 2 cut(s) 474, 1489
Lsp1109I GCAGC 3 cut(s) 4, 158, 1435
LweI GCATC 7 cut(s) 43, 123, 558, 582, 604, 1153, 1419
MaeI CTAG 2 cut(s) 80, 896
MaeII ACGT 3 cut(s) 64, 159, 656
MaeIII GTNAC 4 cut(s) 505, 1034, 1115, 1171
MalI GATC 7 cut(s) 178, 453, 666, 819, 1004, 1140, 1474
MboI GATC 7 cut(s) 176, 451, 664, 817, 1002, 1138, 1472
MboII GAAGA 7 cut(s) 62, 95, 164, 177, 396, 806, 1357
MfeI CAATTG 1 cut(s) 1012
MflI RGATCY 3 cut(s) 176, 664, 1002
MhlI GDGCHC 1 cut(s) 1271
MluCI AATT 6 cut(s) 265, 677, 885, 920, 1012, 1018
MluI ACGCGT 1 cut(s) 358
MmeI TCCRAC 2 cut(s) 468, 642
Mph1103I ATGCAT 3 cut(s) 36, 438, 597
MseI TTAA 3 cut(s) 183, 230, 1504
MslI CAYNNNNRTG 1 cut(s) 600
MspI CCGG 2 cut(s) 140, 1061
MspR9I CCNGG 4 cut(s) 140, 323, 855, 911
MunI CAATTG 1 cut(s) 1012
Mva1269I GAATGC 1 cut(s) 438
MvaI CCWGG 3 cut(s) 323, 855, 911
MvnI CGCG 2 cut(s) 360, 768
MwoI GCNNNNNNNGC 2 cut(s) 120, 774
NciI CCSGG 1 cut(s) 140
NdeII GATC 7 cut(s) 176, 451, 664, 817, 1002, 1138, 1472
NlaIII CATG 6 cut(s) 289, 331, 377, 686, 894, 937
NlaIV GGNNCC 3 cut(s) 666, 1004, 1269
NmuCI GTSAC 4 cut(s) 505, 1034, 1115, 1171
NsiI ATGCAT 3 cut(s) 36, 438, 597
NspI RCATGY 2 cut(s) 289, 686
PaeI GCATGC 1 cut(s) 289
PceI AGGCCT 1 cut(s) 458
PciI ACATGT 1 cut(s) 682
PcsI WCGNNNNNNNCGW 1 cut(s) 54
PctI GAATGC 1 cut(s) 438
PfeI GAWTC 3 cut(s) 623, 803, 1233
Pfl23II CGTACG 1 cut(s) 653
PflFI GACNNNGTC 1 cut(s) 66
PflMI CCANNNNNTGG 1 cut(s) 328
PkrI GCNGC 4 cut(s) 19, 148, 748, 1450
Ppu21I YACGTR 1 cut(s) 657
PscI ACATGT 1 cut(s) 682
PsiI TTATAA 1 cut(s) 1134
Psp6I CCWGG 3 cut(s) 321, 853, 909
PspFI CCCAGC 1 cut(s) 977
PspGI CCWGG 3 cut(s) 321, 853, 909
PspLI CGTACG 1 cut(s) 653
PspN4I GGNNCC 3 cut(s) 666, 1004, 1269
PspOMI GGGCCC 1 cut(s) 1267
PspPI GGNCC 4 cut(s) 344, 1267, 1268, 1389
PstI CTGCAG 2 cut(s) 22, 491
PsuI RGATCY 3 cut(s) 176, 664, 1002
PsyI GACNNNGTC 1 cut(s) 66
RsaI GTAC 4 cut(s) 493, 655, 723, 1059
RsaNI GTAC 4 cut(s) 492, 654, 722, 1058
RseI CAYNNNNRTG 1 cut(s) 600
SaqAI TTAA 3 cut(s) 183, 230, 1504
SatI GCNGC 4 cut(s) 18, 147, 747, 1449
Sau3AI GATC 7 cut(s) 176, 451, 664, 817, 1002, 1138, 1472
Sau96I GGNCC 4 cut(s) 344, 1267, 1268, 1389
ScrFI CCNGG 4 cut(s) 140, 323, 855, 911
SduI GDGCHC 1 cut(s) 1271
SfaNI GCATC 7 cut(s) 43, 123, 558, 582, 604, 1153, 1419
SfcI CTRYAG 2 cut(s) 18, 487
SinI GGWCC 1 cut(s) 1389
SmiMI CAYNNNNRTG 1 cut(s) 600
SphI GCATGC 1 cut(s) 289
Sse9I AATT 6 cut(s) 265, 677, 885, 920, 1012, 1018
SseBI AGGCCT 1 cut(s) 458
SsiI CCGC 2 cut(s) 308, 746
SspMI CTAG 2 cut(s) 80, 896
StuI AGGCCT 1 cut(s) 458
StyD4I CCNGG 4 cut(s) 138, 321, 853, 909
StyI CCWWGG 1 cut(s) 998
TaaI ACNGT 3 cut(s) 216, 252, 602
TaiI ACGT 3 cut(s) 67, 162, 659
TaqI TCGA 4 cut(s) 37, 93, 970, 1209
TasI AATT 6 cut(s) 265, 677, 885, 920, 1012, 1018
TatI WGTACW 1 cut(s) 491
TauI GCSGC 1 cut(s) 749
TfiI GAWTC 3 cut(s) 623, 803, 1233
Tru1I TTAA 3 cut(s) 183, 230, 1504
Tru9I TTAA 3 cut(s) 183, 230, 1504
TscAI CASTG 3 cut(s) 484, 559, 779
TseFI GTSAC 4 cut(s) 505, 1034, 1115, 1171
TseI GCWGC 3 cut(s) 17, 146, 1448
Tsp45I GTSAC 4 cut(s) 505, 1034, 1115, 1171
TspGWI ACGGA 2 cut(s) 326, 1502
TspRI CASTG 3 cut(s) 484, 559, 779
Tth111I GACNNNGTC 1 cut(s) 66
Van91I CCANNNNNTGG 1 cut(s) 328
VpaK11BI GGWCC 1 cut(s) 1389
XapI RAATTY 3 cut(s) 265, 885, 920
XceI RCATGY 2 cut(s) 289, 686
XcmI CCANNNNNNNNNTGG 2 cut(s) 380, 654
XspI CTAG 2 cut(s) 80, 896
ZraI GACGTC 1 cut(s) 65
Zsp2I ATGCAT 3 cut(s) 36, 438, 597
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.