Prupe.3G192800_v2.0.a1

Plant protein of unknown function (DUF868)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
20474045 .. 20475693
1649 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G192800.1

Sequence Viewer

Length: 930 bp
ATGCAGACTCTGAGTCGATCTATGAGAGGCCAATCATTGCATGAGCCTGCACCATTTGCAGAGAAAATCACAGAAGAACCCGTGACAACGAAAACCGCTCAAAGCACAGTGACCTGCGTCTACCTTGCCAACATTGCAACCAATTGGCGCAAGGTGACAGTCATATGGTGTAAGAATCTCATGAACCATTCCCTCAGCATCAGGGTTGATGGCTTAGAGGGTGATTTTCATTACACTTGCAAGATTGACCTCAAGCCATGGCATTTTTGGAGCAAAAAAGGGTACAAATCATTTGAGGTGGAAGGAAATCAAGTGGAGGTCTATTGGGATCTTCGCTCTGCCAAATTTGGCGGTGGCCCGGAACCATGTTCTGACTTTTATGTTGCTCTGGTTTGTGATGAGGAGGTTGTGTTGTTACTAGGAGACATGAAGAAGAAGGCTTACAAGAGAACCAAATCCAGACCAGCCATTGTTGAGGCTCTTCTATATTACAAGAAAGAAAACGTGTTTGCCAAGAAAAGCTTTGCCACAAGAGTGAGGTTTGATGAGAAGAGAAAAGAGCATGACATTGTTGTGGAGAGCTCAACAGCCGGACCGAAAGATCCCGAAATGTGGATCAGCGTAGATGGGATTGTGCTGATCCATGTGAAGAATCTGCAATGGAAATTCAGAGGAAACCAAACTGTGCTTGTGAACATGGAACCGGTCCAAGTGTTCTGGGATGTTCATGATTGGCTTTTCACAAGCCCAAGCACAGGGCATGGCTTGTTTATTTTCAAGCCAGGGGCACCAGAATCAGAGAGTGACAGAGAAAGCAACGGCAACGGCGGCGGCTTAGACAGTGATCACAGCAGTGCTTACTATTCACCTCAGAACAACACAACAACATCTGACTTCTGCCTTTTTCTTCATGCTTATAAGATTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

310

Amino Acids

35.24

Weight (kDa)

6.8

Isoelectric Point (pI)

37.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011855)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 918
Acc36I ACCTGC 1 cut(s) 122
AccB1I GGYRCC 1 cut(s) 787
AccBSI CCGCTC 1 cut(s) 98
AccI GTMKAC 1 cut(s) 120
AciI CCGC 4 cut(s) 96, 351, 828, 831
AclWI GGATC 4 cut(s) 336, 596, 623, 634
AcsI RAATTY 2 cut(s) 344, 665
AfaI GTAC 1 cut(s) 284
AfiI CCNNNNNNNGG 2 cut(s) 612, 755
AflIII ACRYGT 1 cut(s) 504
AgeI ACCGGT 1 cut(s) 703
AgsI TTSAA 1 cut(s) 778
AhdI GACNNNNNGTC 1 cut(s) 12
AjnI CCWGG 1 cut(s) 781
AleI CACNNNNGTG 2 cut(s) 533, 852
AluBI AGCT 2 cut(s) 522, 582
AluI AGCT 2 cut(s) 522, 582
Alw21I GWGCWC 1 cut(s) 584
Alw26I GTCTC 1 cut(s) 417
AlwI GGATC 4 cut(s) 336, 596, 623, 634
AlwNI CAGNNNCTG 1 cut(s) 10
AoxI GGCC 2 cut(s) 28, 355
ApoI RAATTY 2 cut(s) 344, 665
AsiGI ACCGGT 1 cut(s) 703
AspLEI GCGC 1 cut(s) 150
AspS9I GGNCC 3 cut(s) 356, 593, 706
AsuC2I CCSGG 1 cut(s) 359
AsuHPI GGTGA 3 cut(s) 166, 233, 858
AvaII GGWCC 2 cut(s) 593, 706
BaeGI GKGCMC 1 cut(s) 790
BanI GGYRCC 1 cut(s) 787
BanII GRGCYC 1 cut(s) 584
BarI GAAGNNNNNNTAC 2 cut(s) 425, 457
Bbv12I GWGCWC 1 cut(s) 584
BbvCI CCTCAGC 1 cut(s) 194
BccI CCATC 2 cut(s) 203, 620
BceAI ACGGC 2 cut(s) 835, 841
BciT130I CCWGG 1 cut(s) 783
BclI TGATCA 1 cut(s) 844
BcnI CCSGG 1 cut(s) 359
BcoDI GTCTC 1 cut(s) 417
BfaI CTAG 1 cut(s) 419
BfuAI ACCTGC 1 cut(s) 122
BisI GCNGC 2 cut(s) 829, 832
BlsI GCNGC 2 cut(s) 830, 833
Bme1390I CCNGG 2 cut(s) 359, 783
Bme18I GGWCC 2 cut(s) 593, 706
BmeRI GACNNNNNGTC 1 cut(s) 12
BmgT120I GGNCC 3 cut(s) 356, 593, 706
BmiI GGNNCC 3 cut(s) 363, 702, 789
BmrFI CCNGG 2 cut(s) 359, 783
BmsI GCATC 1 cut(s) 207
BoxI GACNNNNGTC 1 cut(s) 116
Bpu10I CCTNAGC 1 cut(s) 194
BpuEI CTTGAG 1 cut(s) 236
BpuMI CCSGG 1 cut(s) 359
BsaJI CCNNGG 2 cut(s) 257, 782
BsaWI WCCGGW 1 cut(s) 703
BsaXI ACNNNNNCTCC 2 cut(s) 395, 425
Bsc4I CCNNNNNNNGG 2 cut(s) 612, 755
Bse118I RCCGGY 1 cut(s) 703
Bse3DI GCAATG 3 cut(s) 35, 132, 665
BseBI CCWGG 1 cut(s) 783
BseDI CCNNGG 2 cut(s) 257, 782
BseGI GGATG 1 cut(s) 727
BseLI CCNNNNNNNGG 2 cut(s) 612, 755
BseMI GCAATG 3 cut(s) 35, 132, 665
BseMII CTCAG 2 cut(s) 208, 884
BseRI GAGGAG 1 cut(s) 416
BseSI GKGCMC 1 cut(s) 790
BsgI GTGCAG 1 cut(s) 33
BshFI GGCC 2 cut(s) 30, 357
BshNI GGYRCC 1 cut(s) 787
BshTI ACCGGT 1 cut(s) 703
BsiHKAI GWGCWC 1 cut(s) 584
BsiSI CCGG 3 cut(s) 359, 591, 704
BslI CCNNNNNNNGG 2 cut(s) 612, 755
BsmAI GTCTC 1 cut(s) 417
BsnI GGCC 2 cut(s) 30, 357
Bsp1286I GDGCHC 2 cut(s) 584, 790
Bsp143I GATC 6 cut(s) 17, 328, 601, 615, 639, 844
Bsp19I CCATGG 1 cut(s) 257
BspACI CCGC 4 cut(s) 96, 351, 828, 831
BspANI GGCC 2 cut(s) 30, 357
BspCNI CTCAG 2 cut(s) 207, 883
BspHI TCATGA 2 cut(s) 180, 727
BspLI GGNNCC 3 cut(s) 363, 702, 789
BspMI ACCTGC 1 cut(s) 122
BspPI GGATC 4 cut(s) 336, 596, 623, 634
BspQI GCTCTTC 1 cut(s) 486
BspT107I GGYRCC 1 cut(s) 787
BsrBI CCGCTC 1 cut(s) 98
BsrDI GCAATG 3 cut(s) 35, 132, 665
BsrFI RCCGGY 1 cut(s) 703
BssAI RCCGGY 1 cut(s) 703
BssECI CCNNGG 2 cut(s) 257, 782
BssMI GATC 6 cut(s) 17, 328, 601, 615, 639, 844
BssT1I CCWWGG 1 cut(s) 257
Bst2UI CCWGG 1 cut(s) 783
Bst4CI ACNGT 4 cut(s) 109, 160, 685, 842
Bst6I CTCTTC 2 cut(s) 486, 545
BstAPI GCANNNNNTGC 1 cut(s) 56
BstC8I GCNNGC 1 cut(s) 48
BstDEI CTNAG 5 cut(s) 11, 194, 214, 835, 870
BstDSI CCRYGG 1 cut(s) 257
BstF5I GGATG 1 cut(s) 727
BstHHI GCGC 1 cut(s) 150
BstKTI GATC 6 cut(s) 20, 331, 604, 618, 642, 847
BstMAI GTCTC 1 cut(s) 417
BstMBI GATC 6 cut(s) 17, 328, 601, 615, 639, 844
BstMWI GCNNNNNNNGC 3 cut(s) 56, 134, 828
BstNI CCWGG 1 cut(s) 783
BstPAI GACNNNNGTC 1 cut(s) 116
BstSCI CCNGG 2 cut(s) 357, 781
BstSLI GKGCMC 1 cut(s) 790
BstX2I RGATCY 2 cut(s) 328, 601
BstYI RGATCY 2 cut(s) 328, 601
BsuRI GGCC 2 cut(s) 30, 357
BtgI CCRYGG 1 cut(s) 257
BtsCI GGATG 1 cut(s) 727
BtsI GCAGTG 1 cut(s) 859
BtsIMutI CAGTG 3 cut(s) 114, 847, 859
BveI ACCTGC 1 cut(s) 122
Cac8I GCNNGC 1 cut(s) 48
CaiI CAGNNNCTG 1 cut(s) 10
CciI TCATGA 2 cut(s) 180, 727
CfoI GCGC 1 cut(s) 150
Cfr10I RCCGGY 1 cut(s) 703
Cfr13I GGNCC 3 cut(s) 356, 593, 706
CpoI CGGWCCG 1 cut(s) 593
CseI GACGC 1 cut(s) 106
Csp6I GTAC 1 cut(s) 283
CspAI ACCGGT 1 cut(s) 703
CspI CGGWCCG 1 cut(s) 593
CviQI GTAC 1 cut(s) 283
DdeI CTNAG 5 cut(s) 11, 194, 214, 835, 870
DpnI GATC 6 cut(s) 19, 330, 603, 617, 641, 846
DpnII GATC 6 cut(s) 17, 328, 601, 615, 639, 844
DriI GACNNNNNGTC 1 cut(s) 12
Eam1104I CTCTTC 2 cut(s) 486, 545
Eam1105I GACNNNNNGTC 1 cut(s) 12
EarI CTCTTC 2 cut(s) 486, 545
Ecl136II GAGCTC 1 cut(s) 582
Eco130I CCWWGG 1 cut(s) 257
Eco24I GRGCYC 1 cut(s) 584
Eco47I GGWCC 2 cut(s) 593, 706
Eco53kI GAGCTC 1 cut(s) 582
EcoICRI GAGCTC 1 cut(s) 582
EcoRII CCWGG 1 cut(s) 781
EcoT14I CCWWGG 1 cut(s) 257
EcoT38I GRGCYC 1 cut(s) 584
ErhI CCWWGG 1 cut(s) 257
FalI AAGNNNNNCTT 2 cut(s) 506, 538
FauNDI CATATG 1 cut(s) 164
FbaI TGATCA 1 cut(s) 844
FblI GTMKAC 1 cut(s) 120
Fnu4HI GCNGC 2 cut(s) 829, 832
FokI GGATG 1 cut(s) 734
FriOI GRGCYC 1 cut(s) 584
Fsp4HI GCNGC 2 cut(s) 829, 832
FspBI CTAG 1 cut(s) 419
GlaI GCGC 1 cut(s) 149
GluI GCNGC 2 cut(s) 829, 832
HaeIII GGCC 2 cut(s) 30, 357
HapII CCGG 3 cut(s) 359, 591, 704
HgaI GACGC 1 cut(s) 106
HhaI GCGC 1 cut(s) 150
Hin6I GCGC 1 cut(s) 148
HinP1I GCGC 1 cut(s) 148
HindIII AAGCTT 1 cut(s) 520
HinfI GANTC 5 cut(s) 7, 13, 175, 652, 794
HpaII CCGG 3 cut(s) 359, 591, 704
HphI GGTGA 3 cut(s) 166, 233, 858
Hpy166II GTNNAC 2 cut(s) 121, 694
Hpy188I TCNGA 6 cut(s) 12, 373, 671, 799, 873, 892
Hpy188III TCNNGA 4 cut(s) 181, 459, 605, 728
Hpy8I GTNNAC 2 cut(s) 121, 694
HpyAV CCTTC 2 cut(s) 296, 430
HpyCH4III ACNGT 4 cut(s) 109, 160, 685, 842
HpyCH4IV ACGT 1 cut(s) 504
HpyCH4V TGCA 7 cut(s) 4, 40, 50, 59, 137, 240, 658
HpyF10VI GCNNNNNNNGC 3 cut(s) 56, 134, 828
HpyF3I CTNAG 5 cut(s) 11, 194, 214, 835, 870
HpySE526I ACGT 1 cut(s) 504
HspAI GCGC 1 cut(s) 148
Ksp22I TGATCA 1 cut(s) 844
Kzo9I GATC 6 cut(s) 17, 328, 601, 615, 639, 844
LguI GCTCTTC 1 cut(s) 486
LmnI GCTCC 1 cut(s) 270
LweI GCATC 1 cut(s) 207
MaeI CTAG 1 cut(s) 419
MaeII ACGT 1 cut(s) 504
MaeIII GTNAC 5 cut(s) 82, 109, 154, 414, 803
MalI GATC 6 cut(s) 19, 330, 603, 617, 641, 846
MbiI CCGCTC 1 cut(s) 98
MboI GATC 6 cut(s) 17, 328, 601, 615, 639, 844
MboII GAAGA 8 cut(s) 86, 323, 442, 445, 473, 562, 661, 899
MfeI CAATTG 1 cut(s) 142
MflI RGATCY 2 cut(s) 328, 601
MhlI GDGCHC 2 cut(s) 584, 790
MluCI AATT 3 cut(s) 142, 344, 665
MlyI GAGTC 1 cut(s) 22
MslI CAYNNNNRTG 3 cut(s) 533, 572, 852
MspI CCGG 3 cut(s) 359, 591, 704
MspR9I CCNGG 2 cut(s) 359, 783
MunI CAATTG 1 cut(s) 142
MvaI CCWGG 1 cut(s) 783
MwoI GCNNNNNNNGC 3 cut(s) 56, 134, 828
NciI CCSGG 1 cut(s) 359
NcoI CCATGG 1 cut(s) 257
NdeI CATATG 1 cut(s) 164
NdeII GATC 6 cut(s) 17, 328, 601, 615, 639, 844
NlaIV GGNNCC 3 cut(s) 363, 702, 789
NmuCI GTSAC 4 cut(s) 82, 109, 154, 803
OliI CACNNNNGTG 2 cut(s) 533, 852
PagI TCATGA 2 cut(s) 180, 727
PciSI GCTCTTC 1 cut(s) 486
PfeI GAWTC 3 cut(s) 175, 652, 794
PinAI ACCGGT 1 cut(s) 703
PkrI GCNGC 2 cut(s) 830, 833
PleI GAGTC 1 cut(s) 21
PpsI GAGTC 1 cut(s) 21
PshAI GACNNNNGTC 1 cut(s) 116
PsiI TTATAA 1 cut(s) 918
Psp124BI GAGCTC 1 cut(s) 584
Psp6I CCWGG 1 cut(s) 781
PspGI CCWGG 1 cut(s) 781
PspN4I GGNNCC 3 cut(s) 363, 702, 789
PspPI GGNCC 3 cut(s) 356, 593, 706
PstNI CAGNNNCTG 1 cut(s) 10
PsuI RGATCY 2 cut(s) 328, 601
RsaI GTAC 1 cut(s) 284
RsaNI GTAC 1 cut(s) 283
RseI CAYNNNNRTG 3 cut(s) 533, 572, 852
Rsr2I CGGWCCG 1 cut(s) 593
RsrII CGGWCCG 1 cut(s) 593
SacI GAGCTC 1 cut(s) 584
SapI GCTCTTC 1 cut(s) 486
SatI GCNGC 2 cut(s) 829, 832
Sau3AI GATC 6 cut(s) 17, 328, 601, 615, 639, 844
Sau96I GGNCC 3 cut(s) 356, 593, 706
SchI GAGTC 1 cut(s) 22
ScrFI CCNGG 2 cut(s) 359, 783
SduI GDGCHC 2 cut(s) 584, 790
SfaNI GCATC 1 cut(s) 207
SinI GGWCC 2 cut(s) 593, 706
SmiMI CAYNNNNRTG 3 cut(s) 533, 572, 852
SmlI CTYRAG 1 cut(s) 251
SmoI CTYRAG 1 cut(s) 251
Sse9I AATT 3 cut(s) 142, 344, 665
SsiI CCGC 4 cut(s) 96, 351, 828, 831
SspMI CTAG 1 cut(s) 419
SstI GAGCTC 1 cut(s) 584
StyD4I CCNGG 2 cut(s) 357, 781
StyI CCWWGG 1 cut(s) 257
TaaI ACNGT 4 cut(s) 109, 160, 685, 842
TaiI ACGT 1 cut(s) 507
TaqI TCGA 1 cut(s) 16
TaqII GACCGA 1 cut(s) 610
TasI AATT 3 cut(s) 142, 344, 665
TauI GCSGC 2 cut(s) 831, 834
TfiI GAWTC 3 cut(s) 175, 652, 794
TscAI CASTG 3 cut(s) 114, 847, 859
TseFI GTSAC 4 cut(s) 82, 109, 154, 803
Tsp45I GTSAC 4 cut(s) 82, 109, 154, 803
TspDTI ATGAA 5 cut(s) 197, 218, 443, 716, 899
TspRI CASTG 3 cut(s) 114, 847, 859
VpaK11BI GGWCC 2 cut(s) 593, 706
XapI RAATTY 2 cut(s) 344, 665
XcmI CCANNNNNNNNNTGG 1 cut(s) 264
XmiI GTMKAC 1 cut(s) 120
XspI CTAG 1 cut(s) 419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.