Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0009881

Physical Location & Seq

Genomic Coordinates Forward (+)

24551377 .. 24556994

Gene Structure 5618 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G258500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2946 bp

ATGGCGTCCGCGACCTCCTTTGCTTCTGGGGTCGGTCTTCCTCTTCCCCAATCGGTTTCTTCCAAATGGTGCAATAAAGCTGCTATCTTTGCTCGCCCACACATCTCCCTCAGCTTCCATGCCAGAACCGAATCCTTCAGGGCCTTAACTTCGCGGCAATTGAGCCAAAACGGTGCGTTCCGAACTGGGTTGCGGAGAAATAGTCGGAGTTCGAGGCCTTTTGTTGTGCGCTGCGATGCTTCAACTGGAAGGATTACACAACAGGACTTTACAGAAATGGCATGGCAATCGATTGTTTCGTCTCCAGAAGTGGCAAAAGAGAACAAACATCAGATAGTGGAGACTGAGCATTTGATGAAAGCACTCTTGGAGCAAAAGAATGGCCTTGCTCGTCGCATTTTCTCCAAAGCTGGGATCGACAATACCCGTCTTCTTGAGGCAACTGATAAGTATATTCAACGCCAACCAAAGGTTCTTGGTGAATCTGCGGGCTCAATGTTAGGACGTGACTTGGAAGCCTTGATTCAACGAGCCAGGGATTACAAGAAAGAGTATGGGGACTCATTCGTCTCTGTGGAGCATTTGGTTCTTGGTTTCACTCAAGATCAACGATTTGGGAAGCAATTATTTAGAGATTTTCAAATATCCAAGGAAACTTTGAAATCTGCTATAGAATCCATACGGGGACGCCAATCAGTTATTGACCAAGATCCTGAAGGAAAATATGAAGCACTTGAAAAGTATGGAAAGGATTTGACAGCTATGGCAAAGGCAGGAAAGCTTGACCCAGTAATAGGAAGAGATGATGAAATACGCAGGTGCATCCAGATTCTCTCCAGAAGAACAAAGAACAACCCGGTGCTGATTGGCGAACCAGGTGTCGGAAAAACTGCAATTTCCGAAGGGCTTGCTCAAAGAATTGTGCAAGGGGATGTCCCACAAGCTTTGATGAACCGTAAGCTAATATCCCTTGACATGGGTTCACTAATTGCTGGGGCAAAATATCGTGGAGAATTTGAGGATAGGCTGAAGGCAGTACTTAAGGAAGTAACAGAATCAGAGGGCCAGATAATCCTTTTTATTGATGAGATCCACACAGTTGTTGGGGCAGGTGCTACAAATGGTGCAATGGATGCTGGCAATCTCTTAAAACCCATGCTTGGTAGGGGAGAGTTGCGGTGTATAGGTGCAACAACACTGGATGAGTATCGTAAATACATTGAGAAAGATCCAGCATTGGAGCGTCGTTTCCAGCAAGTTTATGTTGATCAGCCTACTGTGGAAGATACCATTTCAATACTCCGGGGACTGCGTGAAAGATATGAGTTGCATCATGGAGTCCGCATTTCTGATGGTGCACTCGTGGAAGCTGCGATTCTCTCAGACCGTTACATCAGTGGGCGATTTTTACCTGACAAAGCTATTGACTTAGTTGATGAAGCTGCTGCTAAATTGAAAATGGAAATTACGTCAAAGCCCACAGCCCTAGATGAGATCAACCGTTCAGTGTTGAAACTTGAAATGGAGAGACTATCACTTACAAATGATACAGACAAAGCTTCTAAAGAGAGACTGAACCGCCTTGAGGCTGAGTTGTCTCTCTTAAAAGAGAAACAAGCTGAGCTGGCTGAGCAGTGGGAGCATGAAAAATCGGTCATGACTCGCATTCAGTCAATCAAGGAAGAGATTGACAGGGTAAATCTTGAGATCCAGCAGGCTGAACGAGAGTATGATCTCAACCGGGCTGCTGAGTTGAAGTATGGGAGTCTGAATTCTTTGCAGCGCCAACTTGTTGGTGCAGAAAAAGAGCTAGATGAGTATATGAAGTCTGGGAAGTCCATGCTGAGAGAGGAAGTTACTGGAAATGACATTGCTGAAATAGTCAGCAAGTGGACTGGTATTCCTGTTTCCAAGTTGCAACAATCGGAGATAGAAAAGCTCTTGCACTTGGAGGATGAGCTGCATAAACGTGTTGTGGGTCAGGATCCTGCAGTGAAATCAGTAGCTGAAGCTATTCAGCGGTCTCGAGCAGGTCTCTCAGATCCTCATCGCCCAATTGCTAGTTTCATGTTCATGGGTCCCACTGGTGTTGGGAAGACAGAACTAGCTAAGGCCCTTGCCTCCTACATGTTCAACACTGAAGAAGCACTTGTAAGAATTGATATGAGTGAGTACATGGAAAAGCATGCTGTTTCCAGATTGATAGGAGCTCCACCTGGTTATGTGGGGTATGAGGAGGGAGGACAGCTGACAGAGACTGTTCGCCGGAGGCCGTATTCAGTTATTTTGTTTGATGAGATAGAGAAAGCACATTCTGATGTGTTCAATGTGTTCCTTCAAATTTTAGATGATGGGCGAGTAACTGACTCACAGGGTCGCACTGTGAGTTTCACCAACACTGTCATCATCATGACCTCAAATGTGGGTTCACAGTACATACTAAACACTGATGATGACACCATGCCAAAGGACTTGGCTTATGACACTATAAAGAAGCGGGTAATGGAAGCTGCAAGATCAATATTTCGACCTGAGTTCATGAACCGGGTTGATGAGTACATAGTTTTCCAGCCCTTGGACCGTGATCAGATAAGCCGTATTGTCAAGTTACAGTTGAACCGAGTGCAAAAGAGAATTGCAGACCGCAAGATGAAAGTCAAGGTGAGTGATGCAGCCATCCAGCTTCTTGCAAGTCTCGGGTATGATCCAAACTATGGTGCTAGGCCAGTCAAGCGGGTGATACAGCAGTACGTCGAAAATGAGCTTGCCAAGGGCATCTTGAGAGGAGATTTTGGGGAAGAAGACACTGTATTTATAGACACAGAGGTTACAGCATTTTCGAATGGCCAACTACCCCAGCAAAAGCTTTTGTTCAAGAGGCTTGAAACTGATGATTCAGAATCTCCAGCTGCAGAGAACCAAGAGGCTTTCTCAGAGACTCTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006996 GO:0008150 GO:0009266 GO:0009408 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko04213 map04213

Pfam Domains

Protein Families

AAA AAA_2 ClpB_D2-small Clp_N

Protein Analysis

982

Amino Acids

110.37

Weight (kDa)

6.13

Isoelectric Point (pI)

39.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009881)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15450
fragaria_vesca	FvH4_6g47410 FvH4_6g47410 FvH4_6g47410
malus_domestica	MD00G1172100.v1.1 MD09G1061700.v1.1
prunus_persica	Prupe.3G258500_v2.0.a1 Prupe.3G258500_v2.0.a1 Prupe.3G258500_v2.0.a1
pyrus_communis	pycom111g05200 pycom17g05590
rosa_chinensis	RchiOBHm_Chr2g0166481
rosa_laevigata	RLG00000021622
rosa_multiflora	Rmu_ssc0000296.1_g000002
rosa_roxburghii	Rroxscaffold_2G00084860
rosa_rugosa	Rorug02G0523200
rosa_samantha	Rh2AG589400 Rh2BG601600 Rh2CG572200 Rh2DG612100
rosa_wichuraiana	Rw2G049120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	807, 1100
AasI	GACNNNNNNGTC	1 cut(s)	566
Acc36I	ACCTGC	3 cut(s)	807, 1100, 2021
AccB7I	CCANNNNNTGG	2 cut(s)	2575, 2714
AccII	CGCG	2 cut(s)	11, 154
AclWI	GGATC	9 cut(s)	422, 704, 1084, 1223, 1702, 1979, 1992, 2036, 2699
AcoI	YGGCCR	1 cut(s)	2845
AcsI	RAATTY	3 cut(s)	1013, 1771, 2340
AcuI	CTGAAG	5 cut(s)	121, 735, 1049, 2028, 2160
AcyI	GRCGYC	2 cut(s)	5, 688
AfaI	GTAC	5 cut(s)	1038, 2174, 2435, 2558, 2750
AfiI	CCNNNNNNNGG	9 cut(s)	411, 469, 794, 881, 976, 1160, 1585, 2575, 2714
AflII	CTTAAG	1 cut(s)	1040
AflIII	ACRYGT	2 cut(s)	1969, 2127
AjiI	CACGTC	1 cut(s)	506
AjnI	CCWGG	3 cut(s)	533, 874, 2215
AjuI	GAANNNNNNNTTGG	4 cut(s)	350, 382, 456, 488
Alw21I	GWGCWC	2 cut(s)	1360, 2212
Alw44I	GTGCAC	1 cut(s)	1356
AlwI	GGATC	9 cut(s)	422, 704, 1084, 1223, 1702, 1979, 1992, 2036, 2699
AlwNI	CAGNNNCTG	2 cut(s)	2006, 2258
Ama87I	CYCGRG	2 cut(s)	2025, 2696
AoxI	GGCC	8 cut(s)	141, 215, 382, 1063, 2112, 2270, 2723, 2845
ApaLI	GTGCAC	1 cut(s)	1356
ApoI	RAATTY	3 cut(s)	1013, 1771, 2340
ArsI	GACNNNNNNTTYG	4 cut(s)	334, 366, 864, 896
Asp700I	GAANNNNTTC	1 cut(s)	2013
AspLEI	GCGC	2 cut(s)	231, 1785
AspS9I	GGNCC	5 cut(s)	141, 1063, 2078, 2113, 2578
AsuC2I	CCSGG	4 cut(s)	857, 1304, 1742, 2546
AsuHPI	GGTGA	4 cut(s)	491, 2383, 2674, 2749
AsuII	TTCGAA	1 cut(s)	2840
AvaI	CYCGRG	2 cut(s)	2025, 2696
AvaII	GGWCC	2 cut(s)	2078, 2578
BaeGI	GKGCMC	1 cut(s)	1360
BaeI	ACNNNNGTAYC	2 cut(s)	2732, 2765
BalI	TGGCCA	1 cut(s)	2847
BamHI	GGATCC	1 cut(s)	1984
BanII	GRGCYC	2 cut(s)	494, 2212
BauI	CACGAG	1 cut(s)	1361
BbsI	GAAGAC	4 cut(s)	29, 422, 2102, 2808
Bbv12I	GWGCWC	2 cut(s)	1360, 2212
BbvCI	CCTCAGC	1 cut(s)	110
BccI	CCATC	3 cut(s)	1346, 2345, 2684
BceAI	ACGGC	2 cut(s)	2257, 2580
BcgI	CGANNNNNNTGC	4 cut(s)	270, 304, 890, 924
BciT130I	CCWGG	3 cut(s)	535, 876, 2217
BclI	TGATCA	2 cut(s)	1267, 2584
BcnI	CCSGG	4 cut(s)	857, 1304, 1742, 2546
BfaI	CTAG	5 cut(s)	1487, 1811, 2061, 2105, 2721
BfmI	CTRYAG	4 cut(s)	669, 1989, 2910, 2942
BfoI	RGCGCY	1 cut(s)	1786
BfrI	CTTAAG	1 cut(s)	1040
BfuAI	ACCTGC	3 cut(s)	807, 1100, 2021
BlpI	GCTNAGC	2 cut(s)	1620, 1629
BmcAI	AGTACT	1 cut(s)	1038
Bme1390I	CCNGG	7 cut(s)	535, 857, 876, 1304, 1742, 2217, 2546
Bme18I	GGWCC	2 cut(s)	2078, 2578
BmeT110I	CYCGRG	2 cut(s)	2025, 2696
BmgBI	CACGTC	1 cut(s)	506
BmgT120I	GGNCC	5 cut(s)	141, 1063, 2078, 2113, 2578
BmiI	GGNNCC	3 cut(s)	1986, 2079, 2080
BmrFI	CCNGG	7 cut(s)	535, 857, 876, 1304, 1742, 2217, 2546
BmrI	ACTGGG	2 cut(s)	195, 782
BmsI	GCATC	6 cut(s)	226, 831, 1123, 1339, 2659, 2784
BmuI	ACTGGG	2 cut(s)	195, 782
BpiI	GAAGAC	4 cut(s)	29, 422, 2102, 2808
BplI	GAGNNNNNCTC	3 cut(s)	2019, 2051, 2915
BpmI	CTGGAG	3 cut(s)	288, 820, 2889
Bpu10I	CCTNAGC	2 cut(s)	110, 2109
Bpu1102I	GCTNAGC	2 cut(s)	1620, 1629
Bpu14I	TTCGAA	1 cut(s)	2840
BpuEI	CTTGAG	5 cut(s)	455, 585, 1604, 1724, 2800
BpuMI	CCSGG	4 cut(s)	857, 1304, 1742, 2546
Bsa29I	ATCGAT	1 cut(s)	290
BsaBI	GATNNNNATC	2 cut(s)	1206, 2046
BsaHI	GRCGYC	2 cut(s)	5, 688
BsaI	GGTCTC	2 cut(s)	2028, 2039
BsaJI	CCNNGG	5 cut(s)	534, 648, 1303, 2574, 2769
BsaXI	ACNNNNNCTCC	2 cut(s)	187, 217
Bsc4I	CCNNNNNNNGG	9 cut(s)	411, 469, 794, 881, 976, 1160, 1585, 2575, 2714
Bse1I	ACTGG	8 cut(s)	190, 250, 788, 1203, 1864, 1900, 2089, 2726
Bse3DI	GCAATG	2 cut(s)	1134, 1869
Bse8I	GATNNNNATC	2 cut(s)	1206, 2046
BseBI	CCWGG	3 cut(s)	535, 876, 2217
BseCI	ATCGAT	1 cut(s)	290
BseDI	CCNNGG	5 cut(s)	534, 648, 1303, 2574, 2769
BseGI	GGATG	6 cut(s)	822, 937, 1138, 1207, 1960, 2676
BseJI	GATNNNNATC	2 cut(s)	1206, 2046
BseLI	CCNNNNNNNGG	9 cut(s)	411, 469, 794, 881, 976, 1160, 1585, 2575, 2714
BseMI	GCAATG	2 cut(s)	1134, 1869
BseNI	ACTGG	8 cut(s)	190, 250, 788, 1203, 1864, 1900, 2089, 2726
BseRI	GAGGAG	2 cut(s)	2249, 2799
BseSI	GKGCMC	1 cut(s)	1360
BseYI	CCCAGC	3 cut(s)	410, 992, 2856
BsgI	GTGCAG	1 cut(s)	1818
Bsh1236I	CGCG	2 cut(s)	11, 154
BshFI	GGCC	8 cut(s)	143, 217, 384, 1065, 2114, 2272, 2725, 2847
BshVI	ATCGAT	1 cut(s)	290
BsiHKAI	GWGCWC	2 cut(s)	1360, 2212
BsiHKCI	CYCGRG	2 cut(s)	2025, 2696
BsiSI	CCGG	5 cut(s)	857, 1303, 1741, 2266, 2545
BslFI	GGGAC	5 cut(s)	572, 699, 920, 1320, 2064
BslI	CCNNNNNNNGG	9 cut(s)	411, 469, 794, 881, 976, 1160, 1585, 2575, 2714
BsmBI	CGTCTC	2 cut(s)	306, 574
BsmFI	GGGAC	5 cut(s)	572, 699, 920, 1320, 2064
BsmI	GAATGC	1 cut(s)	1665
BsnI	GGCC	8 cut(s)	143, 217, 384, 1065, 2114, 2272, 2725, 2847
Bso31I	GGTCTC	2 cut(s)	2028, 2039
BsoBI	CYCGRG	2 cut(s)	2025, 2696
Bsp119I	TTCGAA	1 cut(s)	2840
Bsp1286I	GDGCHC	3 cut(s)	494, 1360, 2212
Bsp1720I	GCTNAGC	2 cut(s)	1620, 1629
BspANI	GGCC	8 cut(s)	143, 217, 384, 1065, 2114, 2272, 2725, 2847
BspDI	ATCGAT	1 cut(s)	290
BspFNI	CGCG	2 cut(s)	11, 154
BspHI	TCATGA	3 cut(s)	1656, 2409, 2538
BspLI	GGNNCC	3 cut(s)	1986, 2079, 2080
BspMAI	CTGCAG	2 cut(s)	1993, 2914
BspMI	ACCTGC	3 cut(s)	807, 1100, 2021
BspPI	GGATC	9 cut(s)	422, 704, 1084, 1223, 1702, 1979, 1992, 2036, 2699
BspT104I	TTCGAA	1 cut(s)	2840
BspTI	CTTAAG	1 cut(s)	1040
BspTNI	GGTCTC	2 cut(s)	2028, 2039
BsrDI	GCAATG	2 cut(s)	1134, 1869
BsrI	ACTGG	8 cut(s)	190, 250, 788, 1203, 1864, 1900, 2089, 2726
BssECI	CCNNGG	5 cut(s)	534, 648, 1303, 2574, 2769
BssNI	GRCGYC	2 cut(s)	5, 688
BssSI	CACGAG	1 cut(s)	1361
BssT1I	CCWWGG	3 cut(s)	648, 2574, 2769
Bst2BI	CACGAG	1 cut(s)	1361
Bst2UI	CCWGG	3 cut(s)	535, 876, 2217
Bst6I	CTCTTC	3 cut(s)	48, 793, 1677
BstACI	GRCGYC	2 cut(s)	5, 688
BstAFI	CTTAAG	1 cut(s)	1040
BstAPI	GCANNNNNTGC	1 cut(s)	1133
BstBI	TTCGAA	1 cut(s)	2840
BstC8I	GCNNGC	8 cut(s)	94, 490, 909, 1138, 1626, 1716, 2187, 2766
BstF5I	GGATG	6 cut(s)	822, 937, 1138, 1207, 1960, 2676
BstFNI	CGCG	2 cut(s)	11, 154
BstH2I	RGCGCY	1 cut(s)	1786
BstHHI	GCGC	2 cut(s)	231, 1785
BstMWI	GCNNNNNNNGC	6 cut(s)	89, 1133, 1625, 1630, 1639, 2731
BstNI	CCWGG	3 cut(s)	535, 876, 2217
BstNSI	RCATGY	2 cut(s)	2131, 2189
BstSCI	CCNGG	7 cut(s)	533, 855, 874, 1302, 1740, 2215, 2544
BstSFI	CTRYAG	4 cut(s)	669, 1989, 2910, 2942
BstSLI	GKGCMC	1 cut(s)	1360
BstUI	CGCG	2 cut(s)	11, 154
BstV2I	GAAGAC	4 cut(s)	29, 422, 2102, 2808
BstX2I	RGATCY	6 cut(s)	709, 1089, 1228, 1707, 1984, 2041
BstXI	CCANNNNNNTGG	1 cut(s)	1793
BstYI	RGATCY	6 cut(s)	709, 1089, 1228, 1707, 1984, 2041
Bsu15I	ATCGAT	1 cut(s)	290
BsuRI	GGCC	8 cut(s)	143, 217, 384, 1065, 2114, 2272, 2725, 2847
BsuTUI	ATCGAT	1 cut(s)	290
BtgZI	GCGATG	2 cut(s)	249, 2033
BtrI	CACGTC	1 cut(s)	506
BtsCI	GGATG	6 cut(s)	822, 937, 1138, 1207, 1960, 2676
BtsI	GCAGTG	2 cut(s)	1640, 1998
BveI	ACCTGC	3 cut(s)	807, 1100, 2021
Cac8I	GCNNGC	8 cut(s)	94, 490, 909, 1138, 1626, 1716, 2187, 2766
CaiI	CAGNNNCTG	2 cut(s)	2006, 2258
CciI	TCATGA	3 cut(s)	1656, 2409, 2538
CfoI	GCGC	2 cut(s)	231, 1785
Cfr13I	GGNCC	5 cut(s)	141, 1063, 2078, 2113, 2578
ClaI	ATCGAT	1 cut(s)	290
CseI	GACGC	2 cut(s)	696, 1232
CsiI	ACCWGGT	2 cut(s)	874, 2215
Csp6I	GTAC	5 cut(s)	1037, 2173, 2434, 2557, 2749
CspCI	CAANNNNNGTGG	4 cut(s)	927, 962, 2071, 2106
CviQI	GTAC	5 cut(s)	1037, 2173, 2434, 2557, 2749
DrdI	GACNNNNNNGTC	1 cut(s)	566
DseDI	GACNNNNNNGTC	1 cut(s)	566
EaeI	YGGCCR	1 cut(s)	2845
Eam1104I	CTCTTC	3 cut(s)	48, 793, 1677
EarI	CTCTTC	3 cut(s)	48, 793, 1677
Ecl136II	GAGCTC	1 cut(s)	2210
Eco130I	CCWWGG	3 cut(s)	648, 2574, 2769
Eco147I	AGGCCT	1 cut(s)	217
Eco24I	GRGCYC	2 cut(s)	494, 2212
Eco31I	GGTCTC	2 cut(s)	2028, 2039
Eco47I	GGWCC	2 cut(s)	2078, 2578
Eco53kI	GAGCTC	1 cut(s)	2210
Eco57I	CTGAAG	5 cut(s)	121, 735, 1049, 2028, 2160
Eco88I	CYCGRG	2 cut(s)	2025, 2696
EcoICRI	GAGCTC	1 cut(s)	2210
EcoO109I	RGGNCCY	3 cut(s)	141, 2078, 2113
EcoRI	GAATTC	1 cut(s)	1771
EcoRII	CCWGG	3 cut(s)	533, 874, 2215
EcoT14I	CCWWGG	3 cut(s)	648, 2574, 2769
EcoT38I	GRGCYC	2 cut(s)	494, 2212
ErhI	CCWWGG	3 cut(s)	648, 2574, 2769
Esp3I	CGTCTC	2 cut(s)	306, 574
FalI	AAGNNNNNCTT	4 cut(s)	2133, 2165, 2762, 2794
FaqI	GGGAC	5 cut(s)	572, 699, 920, 1320, 2064
FauI	CCCGC	3 cut(s)	481, 2490, 2727
FbaI	TGATCA	2 cut(s)	1267, 2584
FokI	GGATG	6 cut(s)	809, 944, 1145, 1214, 1967, 2663
FriOI	GRGCYC	2 cut(s)	494, 2212
FspBI	CTAG	5 cut(s)	1487, 1811, 2061, 2105, 2721
GlaI	GCGC	2 cut(s)	230, 1784
GsaI	CCCAGC	3 cut(s)	414, 996, 2860
GsuI	CTGGAG	3 cut(s)	288, 820, 2889
HaeII	RGCGCY	1 cut(s)	1786
HaeIII	GGCC	8 cut(s)	143, 217, 384, 1065, 2114, 2272, 2725, 2847
HapII	CCGG	5 cut(s)	857, 1303, 1741, 2266, 2545
HgaI	GACGC	2 cut(s)	696, 1232
HhaI	GCGC	2 cut(s)	231, 1785
Hin1I	GRCGYC	2 cut(s)	5, 688
Hin6I	GCGC	2 cut(s)	229, 1783
HinP1I	GCGC	2 cut(s)	229, 1783
HindIII	AAGCTT	4 cut(s)	779, 942, 1557, 2864
HpaII	CCGG	5 cut(s)	857, 1303, 1741, 2266, 2545
HphI	GGTGA	4 cut(s)	491, 2383, 2674, 2749
Hpy166II	GTNNAC	4 cut(s)	983, 1358, 1893, 2429
Hpy8I	GTNNAC	4 cut(s)	983, 1358, 1893, 2429
Hpy99I	CGWCG	3 cut(s)	396, 1248, 2756
HpyAV	CCTTC	6 cut(s)	145, 243, 710, 896, 1024, 2345
HpyCH4IV	ACGT	4 cut(s)	505, 1469, 1969, 2751
HpyF10VI	GCNNNNNNNGC	6 cut(s)	89, 1133, 1625, 1630, 1639, 2731
HpySE526I	ACGT	4 cut(s)	505, 1469, 1969, 2751
Hsp92I	GRCGYC	2 cut(s)	5, 688
HspAI	GCGC	2 cut(s)	229, 1783
KflI	GGGWCCC	1 cut(s)	2078
Ksp22I	TGATCA	2 cut(s)	1267, 2584
LmnI	GCTCC	6 cut(s)	370, 577, 1240, 1639, 2207, 2215
LweI	GCATC	6 cut(s)	226, 831, 1123, 1339, 2659, 2784
MabI	ACCWGGT	2 cut(s)	874, 2215
MaeI	CTAG	5 cut(s)	1487, 1811, 2061, 2105, 2721
MaeII	ACGT	4 cut(s)	505, 1469, 1969, 2751
MaeIII	GTNAC	7 cut(s)	506, 1048, 1388, 1855, 2359, 2607, 2827
MfeI	CAATTG	2 cut(s)	158, 2055
MflI	RGATCY	6 cut(s)	709, 1089, 1228, 1707, 1984, 2041
MhlI	GDGCHC	3 cut(s)	494, 1360, 2212
MlsI	TGGCCA	1 cut(s)	2847
MluNI	TGGCCA	1 cut(s)	2847
MlyI	GAGTC	6 cut(s)	554, 1347, 1654, 1774, 2360, 2932
MmeI	TCCRAC	2 cut(s)	185, 862
Mox20I	TGGCCA	1 cut(s)	2847
MroXI	GAANNNNTTC	1 cut(s)	2013
MscI	TGGCCA	1 cut(s)	2847
MseI	TTAA	4 cut(s)	146, 1041, 1148, 1604
MslI	CAYNNNNRTG	4 cut(s)	1968, 2072, 2316, 2408
Msp20I	TGGCCA	1 cut(s)	2847
MspA1I	CMGCKG	3 cut(s)	2020, 2248, 2909
MspCI	CTTAAG	1 cut(s)	1040
MspI	CCGG	5 cut(s)	857, 1303, 1741, 2266, 2545
MspR9I	CCNGG	7 cut(s)	535, 857, 876, 1304, 1742, 2217, 2546
MunI	CAATTG	2 cut(s)	158, 2055
Mva1269I	GAATGC	1 cut(s)	1665
MvaI	CCWGG	3 cut(s)	535, 876, 2217
MvnI	CGCG	2 cut(s)	11, 154
MwoI	GCNNNNNNNGC	6 cut(s)	89, 1133, 1625, 1630, 1639, 2731
NciI	CCSGG	4 cut(s)	857, 1304, 1742, 2546
NlaIV	GGNNCC	3 cut(s)	1986, 2079, 2080
NmuCI	GTSAC	1 cut(s)	506
NspI	RCATGY	2 cut(s)	2131, 2189
NspV	TTCGAA	1 cut(s)	2840
PaeI	GCATGC	1 cut(s)	2189
PaeR7I	CTCGAG	1 cut(s)	2025
PagI	TCATGA	3 cut(s)	1656, 2409, 2538
PaqCI	CACCTGC	2 cut(s)	807, 1100
PceI	AGGCCT	1 cut(s)	217
PciI	ACATGT	1 cut(s)	2127
PcsI	WCGNNNNNNNCGW	1 cut(s)	296
PctI	GAATGC	1 cut(s)	1665
PdmI	GAANNNNTTC	1 cut(s)	2013
PfeI	GAWTC	9 cut(s)	131, 482, 523, 674, 829, 1055, 1375, 2894, 2900
PflMI	CCANNNNNTGG	2 cut(s)	2575, 2714
PleI	GAGTC	6 cut(s)	554, 1346, 1654, 1773, 2360, 2932
PpsI	GAGTC	6 cut(s)	554, 1346, 1654, 1773, 2360, 2932
PpuMI	RGGWCCY	1 cut(s)	2078
PscI	ACATGT	1 cut(s)	2127
Psp124BI	GAGCTC	1 cut(s)	2212
Psp5II	RGGWCCY	1 cut(s)	2078
Psp6I	CCWGG	3 cut(s)	533, 874, 2215
PspFI	CCCAGC	3 cut(s)	410, 992, 2856
PspGI	CCWGG	3 cut(s)	533, 874, 2215
PspN4I	GGNNCC	3 cut(s)	1986, 2079, 2080
PspPI	GGNCC	5 cut(s)	141, 1063, 2078, 2113, 2578
PspPPI	RGGWCCY	1 cut(s)	2078
PstI	CTGCAG	2 cut(s)	1993, 2914
PstNI	CAGNNNCTG	2 cut(s)	2006, 2258
PsuI	RGATCY	6 cut(s)	709, 1089, 1228, 1707, 1984, 2041
PvuII	CAGCTG	2 cut(s)	2248, 2909
RsaI	GTAC	5 cut(s)	1038, 2174, 2435, 2558, 2750
RsaNI	GTAC	5 cut(s)	1037, 2173, 2434, 2557, 2749
RseI	CAYNNNNRTG	4 cut(s)	1968, 2072, 2316, 2408
SacI	GAGCTC	1 cut(s)	2212
SaqAI	TTAA	4 cut(s)	146, 1041, 1148, 1604
Sau96I	GGNCC	5 cut(s)	141, 1063, 2078, 2113, 2578
ScaI	AGTACT	1 cut(s)	1038
SchI	GAGTC	6 cut(s)	554, 1347, 1654, 1774, 2360, 2932
ScrFI	CCNGG	7 cut(s)	535, 857, 876, 1304, 1742, 2217, 2546
SduI	GDGCHC	3 cut(s)	494, 1360, 2212
SexAI	ACCWGGT	2 cut(s)	874, 2215
SfaNI	GCATC	6 cut(s)	226, 831, 1123, 1339, 2659, 2784
SfcI	CTRYAG	4 cut(s)	669, 1989, 2910, 2942
Sfr274I	CTCGAG	1 cut(s)	2025
SfuI	TTCGAA	1 cut(s)	2840
SinI	GGWCC	2 cut(s)	2078, 2578
SlaI	CTCGAG	1 cut(s)	2025
SmiMI	CAYNNNNRTG	4 cut(s)	1968, 2072, 2316, 2408
SmlI	CTYRAG	7 cut(s)	434, 600, 1040, 1583, 1703, 2025, 2779
SmoI	CTYRAG	7 cut(s)	434, 600, 1040, 1583, 1703, 2025, 2779
SphI	GCATGC	1 cut(s)	2189
SseBI	AGGCCT	1 cut(s)	217
SspI	AATATT	1 cut(s)	2523
SspMI	CTAG	5 cut(s)	1487, 1811, 2061, 2105, 2721
SstI	GAGCTC	1 cut(s)	2212
StuI	AGGCCT	1 cut(s)	217
StyD4I	CCNGG	7 cut(s)	533, 855, 874, 1302, 1740, 2215, 2544
StyI	CCWWGG	3 cut(s)	648, 2574, 2769
TaiI	ACGT	4 cut(s)	508, 1472, 1972, 2754
TaqI	TCGA	7 cut(s)	212, 290, 417, 2026, 2527, 2754, 2840
TaqII	GACCGA	2 cut(s)	23, 1642
TatI	WGTACW	4 cut(s)	1036, 2172, 2433, 2556
TauI	GCSGC	1 cut(s)	157
TfiI	GAWTC	9 cut(s)	131, 482, 523, 674, 829, 1055, 1375, 2894, 2900
Tru1I	TTAA	4 cut(s)	146, 1041, 1148, 1604
Tru9I	TTAA	4 cut(s)	146, 1041, 1148, 1604
TseFI	GTSAC	1 cut(s)	506
Tsp45I	GTSAC	1 cut(s)	506
Van91I	CCANNNNNTGG	2 cut(s)	2575, 2714
Vha464I	CTTAAG	1 cut(s)	1040
VneI	GTGCAC	1 cut(s)	1356
VpaK11BI	GGWCC	2 cut(s)	2078, 2578
XapI	RAATTY	3 cut(s)	1013, 1771, 2340
XceI	RCATGY	2 cut(s)	2131, 2189
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1100
XhoI	CTCGAG	1 cut(s)	2025
XmnI	GAANNNNTTC	1 cut(s)	2013
XspI	CTAG	5 cut(s)	1487, 1811, 2061, 2105, 2721
ZrmI	AGTACT	1 cut(s)	1038

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.